Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:26:26 (1813709): wrapper (7.7.26015): starting
11:26:26 (1813709): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 11:26:26] Arguments: --nthreads 4
[2026-01-08 11:26:26] Threads: 4
[2026-01-08 11:26:26] Checking for CVMFS
[2026-01-08 11:26:26] No cvmfs_config command found, will try listing directly
[2026-01-08 11:26:26] CVMFS is ok
[2026-01-08 11:26:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 11:26:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 11:26:26] Further information can be found at the LHC@home message board.
[2026-01-08 11:26:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:26:26] Checking for apptainer binary...
[2026-01-08 11:26:26] which: no apptainer in ((null))
[2026-01-08 11:26:26] apptainer is not installed, using version from CVMFS
[2026-01-08 11:26:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:26:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-08 11:26:26] apptainer works
[2026-01-08 11:26:26] Set ATHENA_PROC_NUMBER=4
[2026-01-08 11:26:26] Set ATHENA_CORE_NUMBER=4
[2026-01-08 11:26:26] Starting ATLAS job with PandaID=6962317346
[2026-01-08 11:26:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 15:24:43]  *** The last 200 lines of the pilot log: ***
[2026-01-08 15:24:43] 2026-01-08 14:17:05,109 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 15:24:43] 2026-01-08 14:17:06,697 | INFO     | time since job start (13825s) is within the limit (174528.0s)
[2026-01-08 15:24:43] 2026-01-08 14:17:07,612 | INFO     | monitor loop #941: job 0:6962317346 is in state 'finished'
[2026-01-08 15:24:43] 2026-01-08 14:17:07,612 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 15:24:43] 2026-01-08 14:17:08,703 | INFO     | time since job start (13827s) is within the limit (174528.0s)
[2026-01-08 15:24:43] 2026-01-08 14:17:10,115 | INFO     | monitor loop #942: job 0:6962317346 is in state 'finished'
[2026-01-08 15:24:43] 2026-01-08 14:17:10,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 15:24:43] 2026-01-08 14:17:10,709 | INFO     | time since job start (13829s) is within the limit (174528.0s)
[2026-01-08 15:24:43] 2026-01-08 14:17:10,904 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 15:24:43] 2026-01-08 14:17:10,921 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2738.0996953124986
[2026-01-08 15:24:43] 2026-01-08 14:17:10,944 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6962317346/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 15:24:43] 2026-01-08 14:17:10,945 | INFO     | extracted standard info from prmon json
[2026-01-08 15:24:43] 2026-01-08 14:17:10,945 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 15:24:43] 2026-01-08 14:17:10,945 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 15:24:43] 2026-01-08 14:17:10,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 15:24:43] 2026-01-08 14:17:10,945 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 15:24:43] 2026-01-08 14:17:10,949 | INFO     | fitting pss+swap vs Time
[2026-01-08 15:24:43] 2026-01-08 14:17:10,949 | INFO     | sum of square deviations: 3579276412.5
[2026-01-08 15:24:43] 2026-01-08 14:17:10,951 | INFO     | sum of deviations: 21336412768.499992
[2026-01-08 15:24:43] 2026-01-08 14:17:10,951 | INFO     | mean x: 1767874898.5
[2026-01-08 15:24:43] 2026-01-08 14:17:10,951 | INFO     | mean y: 2325735.889380531
[2026-01-08 15:24:43] 2026-01-08 14:17:10,951 | INFO     | intersect: -10536147466.609066
[2026-01-08 15:24:43] 2026-01-08 14:17:10,951 | INFO     | chi2: 1.3384845529905247
[2026-01-08 15:24:43] 2026-01-08 14:17:10,952 | INFO     | sum of square deviations: 3346927870.0
[2026-01-08 15:24:43] 2026-01-08 14:17:10,953 | INFO     | sum of deviations: 20649563412.999992
[2026-01-08 15:24:43] 2026-01-08 14:17:10,953 | INFO     | mean x: 1767874746.0
[2026-01-08 15:24:43] 2026-01-08 14:17:10,953 | INFO     | mean y: 2325284.4027149323
[2026-01-08 15:24:43] 2026-01-08 14:17:10,953 | INFO     | intersect: -10904943438.352356
[2026-01-08 15:24:43] 2026-01-08 14:17:10,953 | INFO     | chi2: 1.3391269859787827
[2026-01-08 15:24:43] 2026-01-08 14:17:10,954 | INFO     | current chi2=1.3391269859787827 (change=-0.04799704164105462 %)
[2026-01-08 15:24:43] 2026-01-08 14:17:10,954 | INFO     | right removable region: 220
[2026-01-08 15:24:43] 2026-01-08 14:17:10,954 | INFO     | sum of square deviations: 3346927870.0
[2026-01-08 15:24:43] 2026-01-08 14:17:10,955 | INFO     | sum of deviations: -6662805825.000004
[2026-01-08 15:24:43] 2026-01-08 14:17:10,955 | INFO     | mean x: 1767875051.0
[2026-01-08 15:24:43] 2026-01-08 14:17:10,955 | INFO     | mean y: 2343895.443438914
[2026-01-08 15:24:43] 2026-01-08 14:17:10,956 | INFO     | intersect: 3521693174.8992224
[2026-01-08 15:24:43] 2026-01-08 14:17:10,956 | INFO     | chi2: 0.03675922297400981
[2026-01-08 15:24:43] 2026-01-08 14:17:10,956 | INFO     | current chi2=0.03675922297400981 (change=97.25366849457619 %)
[2026-01-08 15:24:43] 2026-01-08 14:17:10,956 | INFO     | sum of square deviations: 3124858590.0
[2026-01-08 15:24:43] 2026-01-08 14:17:10,958 | INFO     | sum of deviations: -4295909841.500002
[2026-01-08 15:24:43] 2026-01-08 14:17:10,958 | INFO     | mean x: 1767875203.5
[2026-01-08 15:24:43] 2026-01-08 14:17:10,958 | INFO     | mean y: 2342266.763888889
[2026-01-08 15:24:43] 2026-01-08 14:17:10,958 | INFO     | intersect: 2432734640.2182884
[2026-01-08 15:24:43] 2026-01-08 14:17:10,958 | INFO     | chi2: 0.03352845740686436
[2026-01-08 15:24:43] 2026-01-08 14:17:10,958 | INFO     | current chi2=0.03352845740686436 (change=8.78899309005995 %)
[2026-01-08 15:24:43] 2026-01-08 14:17:10,958 | INFO     | left removable region: 20
[2026-01-08 15:24:43] 2026-01-08 14:17:10,959 | INFO     | sum of square deviations: 2480604650.0
[2026-01-08 15:24:43] 2026-01-08 14:17:10,960 | INFO     | sum of deviations: 1652014199.9999995
[2026-01-08 15:24:43] 2026-01-08 14:17:10,960 | INFO     | mean x: 1767875325.5
[2026-01-08 15:24:43] 2026-01-08 14:17:10,960 | INFO     | mean y: 2337372.3
[2026-01-08 15:24:43] 2026-01-08 14:17:10,960 | INFO     | intersect: -1175018778.167436
[2026-01-08 15:24:43] 2026-01-08 14:17:10,960 | INFO     | chi2: 0.017135796913400485
[2026-01-08 15:24:43] 2026-01-08 14:17:10,960 | INFO     | current memory leak: 0.67 B/s (using 200 data points, chi2=0.02)
[2026-01-08 15:24:43] 2026-01-08 14:17:10,961 | INFO     | could have reported an average CPU frequency of 2662 MHz (11 samples)
[2026-01-08 15:24:43] 2026-01-08 14:17:10,961 | INFO     | ..............................
[2026-01-08 15:24:43] 2026-01-08 14:17:10,961 | INFO     | . Timing measurements:
[2026-01-08 15:24:43] 2026-01-08 14:17:10,961 | INFO     | . get job = 0 s
[2026-01-08 15:24:43] 2026-01-08 14:17:10,961 | INFO     | . initial setup = 1 s
[2026-01-08 15:24:43] 2026-01-08 14:17:10,961 | INFO     | . payload setup = 9 s
[2026-01-08 15:24:43] 2026-01-08 14:17:10,961 | INFO     | . stage-in = 0 s
[2026-01-08 15:24:43] 2026-01-08 14:17:10,961 | INFO     | . payload execution = 13788 s
[2026-01-08 15:24:43] 2026-01-08 14:17:10,961 | INFO     | . stage-out = 1 s
[2026-01-08 15:24:43] 2026-01-08 14:17:10,961 | INFO     | . log creation = 0 s
[2026-01-08 15:24:43] 2026-01-08 14:17:10,962 | INFO     | ..............................
[2026-01-08 15:24:43] 2026-01-08 14:17:11,050 | INFO     | 
[2026-01-08 15:24:43] 2026-01-08 14:17:11,051 | INFO     | job summary report
[2026-01-08 15:24:43] 2026-01-08 14:17:11,051 | INFO     | --------------------------------------------------
[2026-01-08 15:24:43] 2026-01-08 14:17:11,051 | INFO     | PanDA job id: 6962317346
[2026-01-08 15:24:43] 2026-01-08 14:17:11,051 | INFO     | task id: 47898826
[2026-01-08 15:24:43] 2026-01-08 14:17:11,051 | INFO     | errors: (none)
[2026-01-08 15:24:43] 2026-01-08 14:17:11,051 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 15:24:43] 2026-01-08 14:17:11,051 | INFO     | pilot state: finished 
[2026-01-08 15:24:43] 2026-01-08 14:17:11,052 | INFO     | transexitcode: 0
[2026-01-08 15:24:43] 2026-01-08 14:17:11,052 | INFO     | exeerrorcode: 0
[2026-01-08 15:24:43] 2026-01-08 14:17:11,052 | INFO     | exeerrordiag: 
[2026-01-08 15:24:43] 2026-01-08 14:17:11,052 | INFO     | exitcode: 0
[2026-01-08 15:24:43] 2026-01-08 14:17:11,052 | INFO     | exitmsg: OK
[2026-01-08 15:24:43] 2026-01-08 14:17:11,052 | INFO     | cpuconsumptiontime: 53119 s
[2026-01-08 15:24:43] 2026-01-08 14:17:11,052 | INFO     | nevents: 400
[2026-01-08 15:24:43] 2026-01-08 14:17:11,052 | INFO     | neventsw: 0
[2026-01-08 15:24:43] 2026-01-08 14:17:11,052 | INFO     | pid: 1825371
[2026-01-08 15:24:43] 2026-01-08 14:17:11,052 | INFO     | pgrp: 1825371
[2026-01-08 15:24:43] 2026-01-08 14:17:11,052 | INFO     | corecount: 4
[2026-01-08 15:24:43] 2026-01-08 14:17:11,053 | INFO     | event service: False
[2026-01-08 15:24:43] 2026-01-08 14:17:11,053 | INFO     | sizes: {0: 2283809, 1: 2284008, 7: 2284270, 11: 2284298, 13801: 2315324, 13802: 2324346, 13805: 2324530, 13811: 2324724}
[2026-01-08 15:24:43] 2026-01-08 14:17:11,053 | INFO     | --------------------------------------------------
[2026-01-08 15:24:43] 2026-01-08 14:17:11,053 | INFO     | 
[2026-01-08 15:24:43] 2026-01-08 14:17:11,053 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2026-01-08 15:24:43] 2026-01-08 14:17:11,083 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,084 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,084 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,084 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,085 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 15:24:43] 2026-01-08 14:17:11,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,086 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 15:24:43] 2026-01-08 14:17:11,086 | INFO     | job 6962317346 has completed (purged errors)
[2026-01-08 15:24:43] 2026-01-08 14:17:11,086 | INFO     | overall cleanup function is called
[2026-01-08 15:24:43] 2026-01-08 14:17:12,100 | INFO     | --- collectZombieJob: --- 10, [1825371]
[2026-01-08 15:24:43] 2026-01-08 14:17:12,100 | INFO     | zombie collector waiting for pid 1825371
[2026-01-08 15:24:43] 2026-01-08 14:17:12,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 15:24:43] 2026-01-08 14:17:12,100 | INFO     | collected zombie processes
[2026-01-08 15:24:43] 2026-01-08 14:17:12,100 | INFO     | will attempt to kill all subprocesses of pid=1825371
[2026-01-08 15:24:43] 2026-01-08 14:17:12,908 | INFO     | process IDs to be killed: [1825371] (in reverse order)
[2026-01-08 15:24:43] 2026-01-08 14:17:13,159 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 15:24:43] 2026-01-08 14:17:13,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 15:24:43] 2026-01-08 14:17:13,192 | INFO     | did not find any defunct processes belonging to 1825371
[2026-01-08 15:24:43] 2026-01-08 14:17:13,225 | INFO     | did not find any defunct processes belonging to 1825371
[2026-01-08 15:24:43] 2026-01-08 14:17:13,225 | INFO     | ready for new job
[2026-01-08 15:24:43] 2026-01-08 14:17:13,225 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 15:24:43] 2026-01-08 14:17:13,228 | INFO     | ***************************************
[2026-01-08 15:24:43] 2026-01-08 14:17:13,228 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 15:24:43] 2026-01-08 14:17:13,228 | INFO     | ***************************************
[2026-01-08 15:24:43] 2026-01-08 14:17:13,229 | INFO     | 
[2026-01-08 15:24:43] 2026-01-08 14:17:13,237 | INFO     | architecture information:
[2026-01-08 15:24:43] 2026-01-08 14:17:13,237 | INFO     | executing command: cat /etc/os-release
[2026-01-08 15:24:43] 2026-01-08 14:17:13,262 | INFO     | cat /etc/os-release:
[2026-01-08 15:24:43] NAME="CentOS Linux"
[2026-01-08 15:24:43] VERSION="7 (Core)"
[2026-01-08 15:24:43] ID="centos"
[2026-01-08 15:24:43] ID_LIKE="rhel fedora"
[2026-01-08 15:24:43] VERSION_ID="7"
[2026-01-08 15:24:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 15:24:43] ANSI_COLOR="0;31"
[2026-01-08 15:24:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 15:24:43] HOME_URL="https://www.centos.org/"
[2026-01-08 15:24:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 15:24:43] 
[2026-01-08 15:24:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 15:24:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 15:24:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 15:24:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 15:24:43] 
[2026-01-08 15:24:43] 2026-01-08 14:17:13,263 | INFO     | ***************************************
[2026-01-08 15:24:43] 2026-01-08 14:17:13,765 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2026-01-08 15:24:43] 2026-01-08 14:17:13,790 | INFO     | sufficient remaining disk space (3324436807680 B)
[2026-01-08 15:24:43] 2026-01-08 14:17:13,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 15:24:43] 2026-01-08 14:17:13,793 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 15:24:43] 2026-01-08 14:17:13,793 | INFO     | update_server=False
[2026-01-08 15:24:43] 2026-01-08 14:17:13,793 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 15:24:43] 2026-01-08 14:17:13,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 15:24:43] 2026-01-08 14:17:13,794 | INFO     | aborting loop
[2026-01-08 15:24:43] 2026-01-08 14:17:13,925 | INFO     | all job control threads have been joined
[2026-01-08 15:24:43] 2026-01-08 14:17:14,562 | INFO     | all payload control threads have been joined
[2026-01-08 15:24:43] 2026-01-08 14:17:14,798 | INFO     | [job] retrieve thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:14,799 | INFO     | [job] job monitor thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:14,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 15:24:43] 2026-01-08 14:17:14,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 15:24:43] 2026-01-08 14:17:14,879 | INFO     | all data control threads have been joined
[2026-01-08 15:24:43] 2026-01-08 14:17:14,931 | INFO     | [job] control thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:14,978 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:15,427 | INFO     | [payload] failed_post thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:15,567 | INFO     | [payload] control thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:15,633 | INFO     | [data] copytool_in thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:15,884 | INFO     | [data] control thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:15,989 | INFO     | [payload] validate_post thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:16,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 15:24:43] 2026-01-08 14:17:16,114 | INFO     | [job] validate thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:16,115 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:16,300 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:16,869 | INFO     | [data] copytool_out thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:17,064 | INFO     | [job] queue monitor thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:18,845 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:24,159 | INFO     | job.realtimelogging is not enabled
[2026-01-08 15:24:43] 2026-01-08 14:17:25,164 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 15:24:43] 2026-01-08 14:17:44,804 | INFO     | PID=1817752 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 15:24:43] 2026-01-08 14:17:44,807 | INFO     | .. there are 5 such processes running
[2026-01-08 15:24:43] 2026-01-08 14:17:44,808 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 15:24:43] 2026-01-08 14:17:44,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 15:24:43] 2026-01-08 14:17:44,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 15:24:43] 2026-01-08 14:18:03,465 | INFO     | [monitor] cgroup control has ended
[2026-01-08 15:24:43] 2026-01-08 14:18:05,335 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23336156616512)>', '<ExcThread(monitor, started 23335920436992)>']
[2026-01-08 15:24:43] 2026-01-08 14:18:05,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 15:24:43] 2026-01-08 14:18:05,902 | INFO     | [monitor] control thread has ended
[2026-01-08 15:24:43] 2026-01-08 14:18:10,361 | INFO     | all workflow threads have been joined
[2026-01-08 15:24:43] 2026-01-08 14:18:10,361 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 15:24:43] 2026-01-08 14:18:10,361 | INFO     | traces error code: 0
[2026-01-08 15:24:43] 2026-01-08 14:18:10,361 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 15:24:43] 2026-01-08 14:18:10,623 [wrapper] ==== pilot stdout END ====
[2026-01-08 15:24:43] 2026-01-08 14:18:10,628 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 15:24:43] 2026-01-08 14:18:10,632 [wrapper] pilotpid: 1817752
[2026-01-08 15:24:43] 2026-01-08 14:18:10,635 [wrapper] Pilot exit status: 0
[2026-01-08 15:24:43] 2026-01-08 14:18:10,651 [wrapper] pandaids: 6962317346
[2026-01-08 15:24:43] 2026-01-08 14:18:10,856 [wrapper] cleanup supervisor_pilot 2173211 1817753
[2026-01-08 15:24:43] 2026-01-08 14:18:10,860 [wrapper] Test setup, not cleaning
[2026-01-08 15:24:43] 2026-01-08 14:18:10,865 [wrapper] apfmon messages muted
[2026-01-08 15:24:43] 2026-01-08 14:18:10,869 [wrapper] ==== wrapper stdout END ====
[2026-01-08 15:24:43] 2026-01-08 14:18:10,873 [wrapper] ==== wrapper stderr END ====
[2026-01-08 15:24:43]  *** Error codes and diagnostics ***
[2026-01-08 15:24:43]     "exeErrorCode": 0,
[2026-01-08 15:24:43]     "exeErrorDiag": "",
[2026-01-08 15:24:43]     "pilotErrorCode": 0,
[2026-01-08 15:24:43]     "pilotErrorDiag": "",
[2026-01-08 15:24:43]  *** Listing of results directory ***
[2026-01-08 15:24:43] total 447848
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 15:24:43] -rwx------ 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc       100 Jan  8 11:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 15:24:43] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 11:26 run_atlas
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc       105 Jan  8 11:26 job.xml
[2026-01-08 15:24:43] -rw-r--r-- 2 boinc boinc 228718438 Jan  8 11:26 EVNT.47898824._000534.pool.root.1
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc      6690 Jan  8 11:26 init_data.xml
[2026-01-08 15:24:43] -rw-r--r-- 2 boinc boinc     15847 Jan  8 11:26 start_atlas.sh
[2026-01-08 15:24:43] drwxrwx--x 2 boinc boinc      4096 Jan  8 11:26 shared
[2026-01-08 15:24:43] -rw-r--r-- 2 boinc boinc    592400 Jan  8 11:26 input.tar.gz
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc         0 Jan  8 11:26 boinc_lockfile
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc      2518 Jan  8 11:26 pandaJob.out
[2026-01-08 15:24:43] -rw------- 1 boinc boinc    989835 Jan  8 11:26 agis_schedconf.cvmfs.json
[2026-01-08 15:24:43] drwx------ 5 boinc boinc      4096 Jan  8 11:26 pilot3
[2026-01-08 15:24:43] -rw------- 1 boinc boinc 221313248 Jan  8 15:16 HITS.47898826._012585.pool.root.1
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc       529 Jan  8 15:16 boinc_task_state.xml
[2026-01-08 15:24:43] -rw------- 1 boinc boinc      1032 Jan  8 15:16 memory_monitor_summary.json
[2026-01-08 15:24:43] -rw------- 1 boinc boinc   1516240 Jan  8 15:17 agis_ddmendpoints.agis.ALL.json
[2026-01-08 15:24:43] -rw------- 1 boinc boinc    407437 Jan  8 15:17 log.47898826._012585.job.log.tgz.1
[2026-01-08 15:24:43] -rw------- 1 boinc boinc        95 Jan  8 15:17 pilot_heartbeat.json
[2026-01-08 15:24:43] -rw------- 1 boinc boinc      7791 Jan  8 15:17 heartbeat.json
[2026-01-08 15:24:43] -rw------- 1 boinc boinc      4907 Jan  8 15:18 pilotlog.txt
[2026-01-08 15:24:43] -rw------- 1 boinc boinc   1915279 Jan  8 15:18 log.47898826._012585.job.log.1
[2026-01-08 15:24:43] -rw------- 1 boinc boinc       357 Jan  8 15:18 output.list
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc       620 Jan  8 15:18 runtime_log
[2026-01-08 15:24:43] -rw------- 1 boinc boinc   2344960 Jan  8 15:18 result.tar.gz
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc      9223 Jan  8 15:18 runtime_log.err
[2026-01-08 15:24:43] -rw------- 1 boinc boinc       666 Jan  8 15:18 EpULDmClpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdkiKDmlV4q4m.diag
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc        26 Jan  8 15:24 wrapper_checkpoint.txt
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc      8192 Jan  8 15:24 boinc_mmap_file
[2026-01-08 15:24:43] -rw-r--r-- 1 boinc boinc     21121 Jan  8 15:24 stderr.txt
[2026-01-08 15:24:43] HITS file was successfully produced:
[2026-01-08 15:24:43] -rw------- 1 boinc boinc 221313248 Jan  8 15:16 shared/HITS.pool.root.1
[2026-01-08 15:24:43]  *** Contents of shared directory: ***
[2026-01-08 15:24:43] total 442384
[2026-01-08 15:24:43] -rw-r--r-- 2 boinc boinc 228718438 Jan  8 11:26 ATLAS.root_0
[2026-01-08 15:24:43] -rw-r--r-- 2 boinc boinc     15847 Jan  8 11:26 start_atlas.sh
[2026-01-08 15:24:43] -rw-r--r-- 2 boinc boinc    592400 Jan  8 11:26 input.tar.gz
[2026-01-08 15:24:43] -rw------- 1 boinc boinc 221313248 Jan  8 15:16 HITS.pool.root.1
[2026-01-08 15:24:43] -rw------- 1 boinc boinc   2344960 Jan  8 15:18 result.tar.gz
15:24:44 (1813709): run_atlas exited; CPU time 54105.387087
15:24:44 (1813709): called boinc_finish(0)

</stderr_txt>
]]>

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