Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:56:58 (1397): wrapper (7.7.26015): starting
05:56:58 (1397): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 05:56:58] Arguments: --nthreads 8
[2026-01-08 05:56:58] Threads: 8
[2026-01-08 05:56:58] Checking for CVMFS
[2026-01-08 05:56:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 05:57:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 05:57:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 05:57:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 05:57:01] 2.11.2.0 4122 33524 101104 154891 0 61 20954710 25165825 96 130560 0 15640636 99.825 8703915 3490 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 05:57:01] CVMFS is ok
[2026-01-08 05:57:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 05:57:01] Checking for apptainer binary...
[2026-01-08 05:57:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 05:57:01] Running /usr/bin/apptainer --version
[2026-01-08 05:57:01] apptainer version 1.3.2-1.el7
[2026-01-08 05:57:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 05:57:15] cg-vwn411.simple-grid.lan
[2026-01-08 05:57:15] apptainer works
[2026-01-08 05:57:16] Set ATHENA_PROC_NUMBER=8
[2026-01-08 05:57:16] Set ATHENA_CORE_NUMBER=8
[2026-01-08 05:57:16] Starting ATLAS job with PandaID=6962320629
[2026-01-08 05:57:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 12:09:25]  *** The last 200 lines of the pilot log: ***
[2026-01-08 12:09:25] 2026-01-08 11:08:14,692 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 12:09:25] 2026-01-08 11:08:14,694 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6962320629/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 12:09:25] 2026-01-08 11:08:14,695 | INFO     | extracted standard info from prmon json
[2026-01-08 12:09:25] 2026-01-08 11:08:14,695 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 12:09:25] 2026-01-08 11:08:14,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 12:09:25] 2026-01-08 11:08:14,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 12:09:25] 2026-01-08 11:08:14,696 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 12:09:25] 2026-01-08 11:08:14,708 | INFO     | fitting pss+swap vs Time
[2026-01-08 12:09:25] 2026-01-08 11:08:14,709 | INFO     | sum of square deviations: 13294714387.5
[2026-01-08 12:09:25] 2026-01-08 11:08:14,713 | INFO     | sum of deviations: 161902550461.49997
[2026-01-08 12:09:25] 2026-01-08 11:08:14,713 | INFO     | mean x: 1767859673.5
[2026-01-08 12:09:25] 2026-01-08 11:08:14,714 | INFO     | mean y: 2457085.0542857144
[2026-01-08 12:09:25] 2026-01-08 11:08:14,714 | INFO     | intersect: -21526474011.562294
[2026-01-08 12:09:25] 2026-01-08 11:08:14,714 | INFO     | chi2: 8.729270155551609
[2026-01-08 12:09:25] 2026-01-08 11:08:14,715 | INFO     | sum of square deviations: 12733038740.0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,719 | INFO     | sum of deviations: 182815458164.00006
[2026-01-08 12:09:25] 2026-01-08 11:08:14,719 | INFO     | mean x: 1767859521.0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,719 | INFO     | mean y: 2462690.098550725
[2026-01-08 12:09:25] 2026-01-08 11:08:14,719 | INFO     | intersect: -25379699015.41156
[2026-01-08 12:09:25] 2026-01-08 11:08:14,720 | INFO     | chi2: 8.016104311922668
[2026-01-08 12:09:25] 2026-01-08 11:08:14,720 | INFO     | current chi2=8.016104311922668 (change=8.169822114800565 %)
[2026-01-08 12:09:25] 2026-01-08 11:08:14,720 | INFO     | right removable region: 344
[2026-01-08 12:09:25] 2026-01-08 11:08:14,721 | INFO     | sum of square deviations: 12733038740.0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,725 | INFO     | sum of deviations: 38993433454.0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,725 | INFO     | mean x: 1767859826.0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,725 | INFO     | mean y: 2490440.208695652
[2026-01-08 12:09:25] 2026-01-08 11:08:14,725 | INFO     | intersect: -5411372337.462475
[2026-01-08 12:09:25] 2026-01-08 11:08:14,726 | INFO     | chi2: 3.8309533757905143
[2026-01-08 12:09:25] 2026-01-08 11:08:14,726 | INFO     | current chi2=3.8309533757905143 (change=56.11370357974178 %)
[2026-01-08 12:09:25] 2026-01-08 11:08:14,726 | INFO     | sum of square deviations: 12187409905.0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,730 | INFO     | sum of deviations: -55651516431.499985
[2026-01-08 12:09:25] 2026-01-08 11:08:14,730 | INFO     | mean x: 1767859978.5
[2026-01-08 12:09:25] 2026-01-08 11:08:14,731 | INFO     | mean y: 2516872.467647059
[2026-01-08 12:09:25] 2026-01-08 11:08:14,731 | INFO     | intersect: 8075117154.970737
[2026-01-08 12:09:25] 2026-01-08 11:08:14,731 | INFO     | chi2: 1.0787489363964546
[2026-01-08 12:09:25] 2026-01-08 11:08:14,731 | INFO     | current chi2=1.0787489363964546 (change=71.84124079364825 %)
[2026-01-08 12:09:25] 2026-01-08 11:08:14,732 | INFO     | sum of square deviations: 11657595320.0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,736 | INFO     | sum of deviations: -75897495579.0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,736 | INFO     | mean x: 1767860131.0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,736 | INFO     | mean y: 2522679.4417910445
[2026-01-08 12:09:25] 2026-01-08 11:08:14,736 | INFO     | intersect: 11512285438.719221
[2026-01-08 12:09:25] 2026-01-08 11:08:14,737 | INFO     | chi2: 0.9093485021054672
[2026-01-08 12:09:25] 2026-01-08 11:08:14,737 | INFO     | current chi2=0.9093485021054672 (change=15.703416112452182 %)
[2026-01-08 12:09:25] 2026-01-08 11:08:14,737 | INFO     | left removable region: 30
[2026-01-08 12:09:25] 2026-01-08 11:08:14,738 | INFO     | sum of square deviations: 9599817202.5
[2026-01-08 12:09:25] 2026-01-08 11:08:14,741 | INFO     | sum of deviations: -40290821531.00001
[2026-01-08 12:09:25] 2026-01-08 11:08:14,741 | INFO     | mean x: 1767860405.5
[2026-01-08 12:09:25] 2026-01-08 11:08:14,741 | INFO     | mean y: 2525689.152866242
[2026-01-08 12:09:25] 2026-01-08 11:08:14,742 | INFO     | intersect: 7422307398.243363
[2026-01-08 12:09:25] 2026-01-08 11:08:14,742 | INFO     | chi2: 0.10892205000819889
[2026-01-08 12:09:25] 2026-01-08 11:08:14,742 | INFO     | current memory leak: -4.20 B/s (using 314 data points, chi2=0.11)
[2026-01-08 12:09:25] 2026-01-08 11:08:14,743 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 12:09:25] 2026-01-08 11:08:14,743 | INFO     | ..............................
[2026-01-08 12:09:25] 2026-01-08 11:08:14,743 | INFO     | . Timing measurements:
[2026-01-08 12:09:25] 2026-01-08 11:08:14,743 | INFO     | . get job = 0 s
[2026-01-08 12:09:25] 2026-01-08 11:08:14,744 | INFO     | . initial setup = 11 s
[2026-01-08 12:09:25] 2026-01-08 11:08:14,744 | INFO     | . payload setup = 143 s
[2026-01-08 12:09:25] 2026-01-08 11:08:14,744 | INFO     | . stage-in = 0 s
[2026-01-08 12:09:25] 2026-01-08 11:08:14,744 | INFO     | . payload execution = 21515 s
[2026-01-08 12:09:25] 2026-01-08 11:08:14,744 | INFO     | . stage-out = 8 s
[2026-01-08 12:09:25] 2026-01-08 11:08:14,744 | INFO     | . log creation = 1 s
[2026-01-08 12:09:25] 2026-01-08 11:08:14,744 | INFO     | ..............................
[2026-01-08 12:09:25] 2026-01-08 11:08:14,889 | INFO     | 
[2026-01-08 12:09:25] 2026-01-08 11:08:14,890 | INFO     | job summary report
[2026-01-08 12:09:25] 2026-01-08 11:08:14,890 | INFO     | --------------------------------------------------
[2026-01-08 12:09:25] 2026-01-08 11:08:14,890 | INFO     | PanDA job id: 6962320629
[2026-01-08 12:09:25] 2026-01-08 11:08:14,890 | INFO     | task id: 47898826
[2026-01-08 12:09:25] 2026-01-08 11:08:14,890 | INFO     | errors: (none)
[2026-01-08 12:09:25] 2026-01-08 11:08:14,890 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 12:09:25] 2026-01-08 11:08:14,890 | INFO     | pilot state: finished 
[2026-01-08 12:09:25] 2026-01-08 11:08:14,890 | INFO     | transexitcode: 0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,890 | INFO     | exeerrorcode: 0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,891 | INFO     | exeerrordiag: 
[2026-01-08 12:09:25] 2026-01-08 11:08:14,891 | INFO     | exitcode: 0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,891 | INFO     | exitmsg: OK
[2026-01-08 12:09:25] 2026-01-08 11:08:14,891 | INFO     | cpuconsumptiontime: 80801 s
[2026-01-08 12:09:25] 2026-01-08 11:08:14,891 | INFO     | nevents: 400
[2026-01-08 12:09:25] 2026-01-08 11:08:14,891 | INFO     | neventsw: 0
[2026-01-08 12:09:25] 2026-01-08 11:08:14,891 | INFO     | pid: 11659
[2026-01-08 12:09:25] 2026-01-08 11:08:14,891 | INFO     | pgrp: 11659
[2026-01-08 12:09:25] 2026-01-08 11:08:14,891 | INFO     | corecount: 8
[2026-01-08 12:09:25] 2026-01-08 11:08:14,892 | INFO     | event service: False
[2026-01-08 12:09:25] 2026-01-08 11:08:14,892 | INFO     | sizes: {0: 2283139, 1: 2283995, 12: 2283995, 23: 2284023, 34: 2284051, 44: 2284079, 55: 2284235, 66: 2284263, 77: 2284291, 87: 2284347, 98: 2284375, 105: 2284945, 
[2026-01-08 12:09:25] 2026-01-08 11:08:14,892 | INFO     | --------------------------------------------------
[2026-01-08 12:09:25] 2026-01-08 11:08:14,892 | INFO     | 
[2026-01-08 12:09:25] 2026-01-08 11:08:14,892 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-08 12:09:25] 2026-01-08 11:08:15,261 | INFO     | PID=5191 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 12:09:25] 2026-01-08 11:08:15,262 | INFO     | .. there are 2 such processes running
[2026-01-08 12:09:25] 2026-01-08 11:08:15,596 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,596 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,596 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,596 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,596 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,598 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 12:09:25] 2026-01-08 11:08:15,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,598 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 12:09:25] 2026-01-08 11:08:15,598 | INFO     | job 6962320629 has completed (purged errors)
[2026-01-08 12:09:25] 2026-01-08 11:08:15,598 | INFO     | overall cleanup function is called
[2026-01-08 12:09:25] 2026-01-08 11:08:16,614 | INFO     | --- collectZombieJob: --- 10, [11659]
[2026-01-08 12:09:25] 2026-01-08 11:08:16,615 | INFO     | zombie collector waiting for pid 11659
[2026-01-08 12:09:25] 2026-01-08 11:08:16,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 12:09:25] 2026-01-08 11:08:16,615 | INFO     | collected zombie processes
[2026-01-08 12:09:25] 2026-01-08 11:08:16,615 | INFO     | will attempt to kill all subprocesses of pid=11659
[2026-01-08 12:09:25] 2026-01-08 11:08:16,704 | INFO     | process IDs to be killed: [11659] (in reverse order)
[2026-01-08 12:09:25] 2026-01-08 11:08:17,384 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 12:09:25] 2026-01-08 11:08:17,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 12:09:25] 2026-01-08 11:08:17,386 | INFO     | did not find any defunct processes belonging to 11659
[2026-01-08 12:09:25] 2026-01-08 11:08:17,388 | INFO     | did not find any defunct processes belonging to 11659
[2026-01-08 12:09:25] 2026-01-08 11:08:17,389 | INFO     | ready for new job
[2026-01-08 12:09:25] 2026-01-08 11:08:17,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 12:09:25] 2026-01-08 11:08:17,391 | INFO     | ***************************************
[2026-01-08 12:09:25] 2026-01-08 11:08:17,391 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 12:09:25] 2026-01-08 11:08:17,392 | INFO     | ***************************************
[2026-01-08 12:09:25] 2026-01-08 11:08:17,392 | INFO     | 
[2026-01-08 12:09:25] 2026-01-08 11:08:17,392 | INFO     | pilot is running in a VM
[2026-01-08 12:09:25] 2026-01-08 11:08:17,392 | INFO     | architecture information:
[2026-01-08 12:09:25] 2026-01-08 11:08:17,393 | INFO     | executing command: cat /etc/os-release
[2026-01-08 12:09:25] 2026-01-08 11:08:17,713 | INFO     | cat /etc/os-release:
[2026-01-08 12:09:25] NAME="CentOS Linux"
[2026-01-08 12:09:25] VERSION="7 (Core)"
[2026-01-08 12:09:25] ID="centos"
[2026-01-08 12:09:25] ID_LIKE="rhel fedora"
[2026-01-08 12:09:25] VERSION_ID="7"
[2026-01-08 12:09:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 12:09:25] ANSI_COLOR="0;31"
[2026-01-08 12:09:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 12:09:25] HOME_URL="https://www.centos.org/"
[2026-01-08 12:09:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 12:09:25] 
[2026-01-08 12:09:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 12:09:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 12:09:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 12:09:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 12:09:25] 
[2026-01-08 12:09:25] 2026-01-08 11:08:17,713 | INFO     | ***************************************
[2026-01-08 12:09:25] 2026-01-08 11:08:18,217 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-08 12:09:25] 2026-01-08 11:08:18,500 | INFO     | sufficient remaining disk space (496021536768 B)
[2026-01-08 12:09:25] 2026-01-08 11:08:18,500 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 12:09:25] 2026-01-08 11:08:18,500 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 12:09:25] 2026-01-08 11:08:18,501 | INFO     | update_server=False
[2026-01-08 12:09:25] 2026-01-08 11:08:18,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 12:09:25] 2026-01-08 11:08:18,501 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 12:09:25] 2026-01-08 11:08:18,501 | INFO     | aborting loop
[2026-01-08 12:09:25] 2026-01-08 11:08:18,513 | INFO     | all data control threads have been joined
[2026-01-08 12:09:25] 2026-01-08 11:08:18,619 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 12:09:25] 2026-01-08 11:08:18,733 | INFO     | all payload control threads have been joined
[2026-01-08 12:09:25] 2026-01-08 11:08:19,506 | INFO     | [job] retrieve thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:19,507 | INFO     | [job] job monitor thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:19,519 | INFO     | [data] control thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:19,558 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:19,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 12:09:25] 2026-01-08 11:08:19,700 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:19,739 | INFO     | [payload] control thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:19,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 12:09:25] 2026-01-08 11:08:20,097 | INFO     | all job control threads have been joined
[2026-01-08 12:09:25] 2026-01-08 11:08:20,344 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:20,715 | INFO     | [payload] failed_post thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:20,854 | INFO     | [data] copytool_in thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:20,855 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:20,909 | INFO     | [job] queue monitor thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:20,928 | INFO     | [payload] validate_post thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:21,000 | INFO     | [job] validate thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:21,103 | INFO     | [job] control thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:21,570 | INFO     | [data] copytool_out thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:22,630 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 12:09:25] 2026-01-08 11:08:47,394 | INFO     | PID=5191 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 12:09:25] 2026-01-08 11:08:47,394 | INFO     | .. there are 2 such processes running
[2026-01-08 12:09:25] 2026-01-08 11:08:47,395 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 12:09:25] 2026-01-08 11:08:47,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 12:09:25] 2026-01-08 11:08:47,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 12:09:25] 2026-01-08 11:09:14,070 | INFO     | [monitor] cgroup control has ended
[2026-01-08 12:09:25] 2026-01-08 11:09:15,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935726126912)>', '<ExcThread(monitor, started 139934992164608)>']
[2026-01-08 12:09:25] 2026-01-08 11:09:15,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 12:09:25] 2026-01-08 11:09:15,563 | INFO     | [monitor] control thread has ended
[2026-01-08 12:09:25] 2026-01-08 11:09:20,491 | INFO     | all workflow threads have been joined
[2026-01-08 12:09:25] 2026-01-08 11:09:20,492 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 12:09:25] 2026-01-08 11:09:20,492 | INFO     | traces error code: 0
[2026-01-08 12:09:25] 2026-01-08 11:09:20,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 12:09:25] 2026-01-08 11:09:20,882 [wrapper] ==== pilot stdout END ====
[2026-01-08 12:09:25] 2026-01-08 11:09:20,988 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 12:09:25] 2026-01-08 11:09:21,098 [wrapper] pilotpid: 5191
[2026-01-08 12:09:25] 2026-01-08 11:09:21,208 [wrapper] Pilot exit status: 0
[2026-01-08 12:09:25] 2026-01-08 11:09:21,681 [wrapper] pandaids: 6962320629
[2026-01-08 12:09:25] 2026-01-08 11:09:22,195 [wrapper] cleanup supervisor_pilot 10944 5192
[2026-01-08 12:09:25] 2026-01-08 11:09:22,205 [wrapper] Test setup, not cleaning
[2026-01-08 12:09:25] 2026-01-08 11:09:22,269 [wrapper] apfmon messages muted
[2026-01-08 12:09:25] 2026-01-08 11:09:22,348 [wrapper] ==== wrapper stdout END ====
[2026-01-08 12:09:25] 2026-01-08 11:09:22,448 [wrapper] ==== wrapper stderr END ====
[2026-01-08 12:09:25]  *** Error codes and diagnostics ***
[2026-01-08 12:09:25]     "exeErrorCode": 0,
[2026-01-08 12:09:25]     "exeErrorDiag": "",
[2026-01-08 12:09:25]     "pilotErrorCode": 0,
[2026-01-08 12:09:25]     "pilotErrorDiag": "",
[2026-01-08 12:09:25]  *** Listing of results directory ***
[2026-01-08 12:09:25] total 446420
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 12:09:25] -rwx------. 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc       100 Jan  8 05:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 12:09:25] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 05:56 run_atlas
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc       105 Jan  8 05:56 job.xml
[2026-01-08 12:09:25] -rw-r--r--. 2 boinc boinc 225501664 Jan  8 05:56 EVNT.47898824._000677.pool.root.1
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc      6390 Jan  8 05:56 init_data.xml
[2026-01-08 12:09:25] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:56 start_atlas.sh
[2026-01-08 12:09:25] drwxrwx--x. 2 boinc boinc        68 Jan  8 05:56 shared
[2026-01-08 12:09:25] -rw-r--r--. 2 boinc boinc    592391 Jan  8 05:56 input.tar.gz
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc         0 Jan  8 05:56 boinc_lockfile
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc      2518 Jan  8 05:57 pandaJob.out
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc    989835 Jan  8 06:01 agis_schedconf.cvmfs.json
[2026-01-08 12:09:25] drwx------. 5 boinc boinc      4096 Jan  8 06:01 pilot3
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc 220814883 Jan  8 12:04 HITS.47898826._014442.pool.root.1
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc       531 Jan  8 12:05 boinc_task_state.xml
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc      1017 Jan  8 12:06 memory_monitor_summary.json
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc   1516240 Jan  8 12:06 agis_ddmendpoints.agis.ALL.json
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc    541190 Jan  8 12:06 log.47898826._014442.job.log.tgz.1
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc        95 Jan  8 12:08 pilot_heartbeat.json
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc      7779 Jan  8 12:08 heartbeat.json
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc      4883 Jan  8 12:09 pilotlog.txt
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc   2916228 Jan  8 12:09 log.47898826._014442.job.log.1
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc       357 Jan  8 12:09 output.list
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc       620 Jan  8 12:09 runtime_log
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc   3481600 Jan  8 12:09 result.tar.gz
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc      8817 Jan  8 12:09 runtime_log.err
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc       657 Jan  8 12:09 bPNLDm9kpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLkiKDm1iocqn.diag
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc      8192 Jan  8 12:09 boinc_mmap_file
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc        28 Jan  8 12:09 wrapper_checkpoint.txt
[2026-01-08 12:09:25] -rw-r--r--. 1 boinc boinc     20877 Jan  8 12:09 stderr.txt
[2026-01-08 12:09:25] HITS file was successfully produced:
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc 220814883 Jan  8 12:04 shared/HITS.pool.root.1
[2026-01-08 12:09:25]  *** Contents of shared directory: ***
[2026-01-08 12:09:25] total 439856
[2026-01-08 12:09:25] -rw-r--r--. 2 boinc boinc 225501664 Jan  8 05:56 ATLAS.root_0
[2026-01-08 12:09:25] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:56 start_atlas.sh
[2026-01-08 12:09:25] -rw-r--r--. 2 boinc boinc    592391 Jan  8 05:56 input.tar.gz
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc 220814883 Jan  8 12:04 HITS.pool.root.1
[2026-01-08 12:09:25] -rw-------. 1 boinc boinc   3481600 Jan  8 12:09 result.tar.gz
12:09:27 (1397): run_atlas exited; CPU time 81026.312185
12:09:27 (1397): called boinc_finish(0)

</stderr_txt>
]]>

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