Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:18:26 (32762): wrapper (7.7.26015): starting
23:18:26 (32762): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 23:18:26] Arguments: --nthreads 8
[2026-01-07 23:18:26] Threads: 8
[2026-01-07 23:18:26] Checking for CVMFS
[2026-01-07 23:18:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 23:18:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 23:18:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 23:18:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 23:18:31] 2.11.2.0 32220 33126 95848 154882 2 11 15913791 25165825 96 130560 0 14456325 99.833 8949059 4164 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-07 23:18:31] CVMFS is ok
[2026-01-07 23:18:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:18:31] Checking for apptainer binary...
[2026-01-07 23:18:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 23:18:31] Running /usr/bin/apptainer --version
[2026-01-07 23:18:31] apptainer version 1.3.2-1.el7
[2026-01-07 23:18:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:19:35] cg-vwn447.simple-grid.lan
[2026-01-07 23:19:35] apptainer works
[2026-01-07 23:19:35] Set ATHENA_PROC_NUMBER=8
[2026-01-07 23:19:35] Set ATHENA_CORE_NUMBER=8
[2026-01-07 23:19:36] Starting ATLAS job with PandaID=6962317299
[2026-01-07 23:19:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 05:39:28]  *** The last 200 lines of the pilot log: ***
[2026-01-08 05:39:28] 2026-01-08 04:38:49,088 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 05:39:28] 2026-01-08 04:38:49,090 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6962317299/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:39:28] 2026-01-08 04:38:49,091 | INFO     | extracted standard info from prmon json
[2026-01-08 05:39:28] 2026-01-08 04:38:49,091 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:39:28] 2026-01-08 04:38:49,091 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:39:28] 2026-01-08 04:38:49,091 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:39:28] 2026-01-08 04:38:49,092 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:39:28] 2026-01-08 04:38:49,100 | INFO     | fitting pss+swap vs Time
[2026-01-08 05:39:28] 2026-01-08 04:38:49,101 | INFO     | sum of square deviations: 14227354795.49722
[2026-01-08 05:39:28] 2026-01-08 04:38:49,105 | INFO     | sum of deviations: 160937056274.05008
[2026-01-08 05:39:28] 2026-01-08 04:38:49,106 | INFO     | mean x: 1767836113.5027933
[2026-01-08 05:39:28] 2026-01-08 04:38:49,106 | INFO     | mean y: 2445138.9497206705
[2026-01-08 05:39:28] 2026-01-08 04:38:49,106 | INFO     | intersect: -19994971399.234947
[2026-01-08 05:39:28] 2026-01-08 04:38:49,107 | INFO     | chi2: 8.882483534782077
[2026-01-08 05:39:28] 2026-01-08 04:38:49,107 | INFO     | sum of square deviations: 13639520822.99708
[2026-01-08 05:39:28] 2026-01-08 04:38:49,112 | INFO     | sum of deviations: 206047453209.90933
[2026-01-08 05:39:28] 2026-01-08 04:38:49,112 | INFO     | mean x: 1767835961.002833
[2026-01-08 05:39:28] 2026-01-08 04:38:49,112 | INFO     | mean y: 2456737.0906515582
[2026-01-08 05:39:28] 2026-01-08 04:38:49,112 | INFO     | intersect: -26703620564.640106
[2026-01-08 05:39:28] 2026-01-08 04:38:49,113 | INFO     | chi2: 7.412122053558192
[2026-01-08 05:39:28] 2026-01-08 04:38:49,113 | INFO     | current chi2=7.412122053558192 (change=16.553495151060353 %)
[2026-01-08 05:39:28] 2026-01-08 04:38:49,113 | INFO     | right removable region: 352
[2026-01-08 05:39:28] 2026-01-08 04:38:49,114 | INFO     | sum of square deviations: 13639520212.99708
[2026-01-08 05:39:28] 2026-01-08 04:38:49,119 | INFO     | sum of deviations: 33816762119.23515
[2026-01-08 05:39:28] 2026-01-08 04:38:49,119 | INFO     | mean x: 1767836266.002833
[2026-01-08 05:39:28] 2026-01-08 04:38:49,119 | INFO     | mean y: 2478105.764872521
[2026-01-08 05:39:28] 2026-01-08 04:38:49,119 | INFO     | intersect: -4380557187.236713
[2026-01-08 05:39:28] 2026-01-08 04:38:49,120 | INFO     | chi2: 3.9517076251578054
[2026-01-08 05:39:28] 2026-01-08 04:38:49,120 | INFO     | current chi2=3.9517076251578054 (change=55.51123050570612 %)
[2026-01-08 05:39:28] 2026-01-08 04:38:49,121 | INFO     | sum of square deviations: 13068104542.997084
[2026-01-08 05:39:28] 2026-01-08 04:38:49,125 | INFO     | sum of deviations: -50640548811.20114
[2026-01-08 05:39:28] 2026-01-08 04:38:49,125 | INFO     | mean x: 1767836418.5028737
[2026-01-08 05:39:28] 2026-01-08 04:38:49,126 | INFO     | mean y: 2500604.2011494255
[2026-01-08 05:39:28] 2026-01-08 04:38:49,126 | INFO     | intersect: 6853089084.485987
[2026-01-08 05:39:28] 2026-01-08 04:38:49,126 | INFO     | chi2: 1.7764831062284605
[2026-01-08 05:39:28] 2026-01-08 04:38:49,127 | INFO     | current chi2=1.7764831062284605 (change=55.04517857245273 %)
[2026-01-08 05:39:28] 2026-01-08 04:38:49,127 | INFO     | sum of square deviations: 12512875222.997065
[2026-01-08 05:39:28] 2026-01-08 04:38:49,132 | INFO     | sum of deviations: -62101088653.17786
[2026-01-08 05:39:28] 2026-01-08 04:38:49,132 | INFO     | mean x: 1767836571.0029154
[2026-01-08 05:39:28] 2026-01-08 04:38:49,132 | INFO     | mean y: 2503735.177842566
[2026-01-08 05:39:28] 2026-01-08 04:38:49,132 | INFO     | intersect: 8776232687.450298
[2026-01-08 05:39:28] 2026-01-08 04:38:49,133 | INFO     | chi2: 1.7127327861803916
[2026-01-08 05:39:28] 2026-01-08 04:38:49,133 | INFO     | current chi2=1.7127327861803916 (change=3.5885688878524267 %)
[2026-01-08 05:39:28] 2026-01-08 04:38:49,133 | INFO     | left removable region: 30
[2026-01-08 05:39:28] 2026-01-08 04:38:49,134 | INFO     | sum of square deviations: 10352419282.496971
[2026-01-08 05:39:28] 2026-01-08 04:38:49,138 | INFO     | sum of deviations: 14785976140.484472
[2026-01-08 05:39:28] 2026-01-08 04:38:49,138 | INFO     | mean x: 1767836845.5031056
[2026-01-08 05:39:28] 2026-01-08 04:38:49,138 | INFO     | mean y: 2507417.01552795
[2026-01-08 05:39:28] 2026-01-08 04:38:49,138 | INFO     | intersect: -2522428320.6696987
[2026-01-08 05:39:28] 2026-01-08 04:38:49,139 | INFO     | chi2: 0.014044574842008706
[2026-01-08 05:39:28] 2026-01-08 04:38:49,139 | INFO     | current memory leak: 1.43 B/s (using 322 data points, chi2=0.01)
[2026-01-08 05:39:28] 2026-01-08 04:38:49,140 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 05:39:28] 2026-01-08 04:38:49,140 | INFO     | ..............................
[2026-01-08 05:39:28] 2026-01-08 04:38:49,140 | INFO     | . Timing measurements:
[2026-01-08 05:39:28] 2026-01-08 04:38:49,140 | INFO     | . get job = 0 s
[2026-01-08 05:39:28] 2026-01-08 04:38:49,141 | INFO     | . initial setup = 6 s
[2026-01-08 05:39:28] 2026-01-08 04:38:49,141 | INFO     | . payload setup = 154 s
[2026-01-08 05:39:28] 2026-01-08 04:38:49,141 | INFO     | . stage-in = 0 s
[2026-01-08 05:39:28] 2026-01-08 04:38:49,141 | INFO     | . payload execution = 21951 s
[2026-01-08 05:39:28] 2026-01-08 04:38:49,141 | INFO     | . stage-out = 4 s
[2026-01-08 05:39:28] 2026-01-08 04:38:49,141 | INFO     | . log creation = 1 s
[2026-01-08 05:39:28] 2026-01-08 04:38:49,141 | INFO     | ..............................
[2026-01-08 05:39:28] 2026-01-08 04:38:49,568 | INFO     | 
[2026-01-08 05:39:28] 2026-01-08 04:38:49,569 | INFO     | job summary report
[2026-01-08 05:39:28] 2026-01-08 04:38:49,569 | INFO     | --------------------------------------------------
[2026-01-08 05:39:28] 2026-01-08 04:38:49,569 | INFO     | PanDA job id: 6962317299
[2026-01-08 05:39:28] 2026-01-08 04:38:49,569 | INFO     | task id: 47898826
[2026-01-08 05:39:28] 2026-01-08 04:38:49,569 | INFO     | errors: (none)
[2026-01-08 05:39:28] 2026-01-08 04:38:49,569 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 05:39:28] 2026-01-08 04:38:49,569 | INFO     | pilot state: finished 
[2026-01-08 05:39:28] 2026-01-08 04:38:49,570 | INFO     | transexitcode: 0
[2026-01-08 05:39:28] 2026-01-08 04:38:49,570 | INFO     | exeerrorcode: 0
[2026-01-08 05:39:28] 2026-01-08 04:38:49,570 | INFO     | exeerrordiag: 
[2026-01-08 05:39:28] 2026-01-08 04:38:49,570 | INFO     | exitcode: 0
[2026-01-08 05:39:28] 2026-01-08 04:38:49,570 | INFO     | exitmsg: OK
[2026-01-08 05:39:28] 2026-01-08 04:38:49,570 | INFO     | cpuconsumptiontime: 82035 s
[2026-01-08 05:39:28] 2026-01-08 04:38:49,570 | INFO     | nevents: 400
[2026-01-08 05:39:28] 2026-01-08 04:38:49,570 | INFO     | neventsw: 0
[2026-01-08 05:39:28] 2026-01-08 04:38:49,570 | INFO     | pid: 10873
[2026-01-08 05:39:28] 2026-01-08 04:38:49,570 | INFO     | pgrp: 10873
[2026-01-08 05:39:28] 2026-01-08 04:38:49,571 | INFO     | corecount: 8
[2026-01-08 05:39:28] 2026-01-08 04:38:49,571 | INFO     | event service: False
[2026-01-08 05:39:28] 2026-01-08 04:38:49,571 | INFO     | sizes: {0: 2283741, 1: 2283996, 2: 2283996, 12: 2284024, 23: 2284052, 34: 2284080, 45: 2284236, 55: 2284264, 66: 2284292, 77: 2284320, 88: 2284376, 98: 2284684, 10
[2026-01-08 05:39:28] 2026-01-08 04:38:49,571 | INFO     | --------------------------------------------------
[2026-01-08 05:39:28] 2026-01-08 04:38:49,571 | INFO     | 
[2026-01-08 05:39:28] 2026-01-08 04:38:49,571 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-08 05:39:28] 2026-01-08 04:38:49,829 | INFO     | time since job start (22450s) is within the limit (174528.0s)
[2026-01-08 05:39:28] 2026-01-08 04:38:50,285 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,285 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,285 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,285 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,286 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,286 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,286 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,286 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,286 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,287 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,287 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,287 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 05:39:28] 2026-01-08 04:38:50,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,287 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 05:39:28] 2026-01-08 04:38:50,287 | INFO     | job 6962317299 has completed (purged errors)
[2026-01-08 05:39:28] 2026-01-08 04:38:50,287 | INFO     | overall cleanup function is called
[2026-01-08 05:39:28] 2026-01-08 04:38:51,296 | INFO     | --- collectZombieJob: --- 10, [10873]
[2026-01-08 05:39:28] 2026-01-08 04:38:51,297 | INFO     | zombie collector waiting for pid 10873
[2026-01-08 05:39:28] 2026-01-08 04:38:51,297 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 05:39:28] 2026-01-08 04:38:51,297 | INFO     | collected zombie processes
[2026-01-08 05:39:28] 2026-01-08 04:38:51,297 | INFO     | will attempt to kill all subprocesses of pid=10873
[2026-01-08 05:39:28] 2026-01-08 04:38:51,382 | INFO     | process IDs to be killed: [10873] (in reverse order)
[2026-01-08 05:39:28] 2026-01-08 04:38:52,222 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 05:39:28] 2026-01-08 04:38:52,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 05:39:28] 2026-01-08 04:38:52,225 | INFO     | did not find any defunct processes belonging to 10873
[2026-01-08 05:39:28] 2026-01-08 04:38:52,226 | INFO     | did not find any defunct processes belonging to 10873
[2026-01-08 05:39:28] 2026-01-08 04:38:52,227 | INFO     | ready for new job
[2026-01-08 05:39:28] 2026-01-08 04:38:52,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 05:39:28] 2026-01-08 04:38:52,229 | INFO     | ***************************************
[2026-01-08 05:39:28] 2026-01-08 04:38:52,229 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 05:39:28] 2026-01-08 04:38:52,230 | INFO     | ***************************************
[2026-01-08 05:39:28] 2026-01-08 04:38:52,230 | INFO     | 
[2026-01-08 05:39:28] 2026-01-08 04:38:52,230 | INFO     | pilot is running in a VM
[2026-01-08 05:39:28] 2026-01-08 04:38:52,230 | INFO     | architecture information:
[2026-01-08 05:39:28] 2026-01-08 04:38:52,246 | INFO     | executing command: cat /etc/os-release
[2026-01-08 05:39:28] 2026-01-08 04:38:52,502 | INFO     | cat /etc/os-release:
[2026-01-08 05:39:28] NAME="CentOS Linux"
[2026-01-08 05:39:28] VERSION="7 (Core)"
[2026-01-08 05:39:28] ID="centos"
[2026-01-08 05:39:28] ID_LIKE="rhel fedora"
[2026-01-08 05:39:28] VERSION_ID="7"
[2026-01-08 05:39:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 05:39:28] ANSI_COLOR="0;31"
[2026-01-08 05:39:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 05:39:28] HOME_URL="https://www.centos.org/"
[2026-01-08 05:39:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 05:39:28] 
[2026-01-08 05:39:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 05:39:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 05:39:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 05:39:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 05:39:28] 
[2026-01-08 05:39:28] 2026-01-08 04:38:52,502 | INFO     | ***************************************
[2026-01-08 05:39:28] 2026-01-08 04:38:53,005 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-08 05:39:28] 2026-01-08 04:38:53,315 | INFO     | sufficient remaining disk space (497408802816 B)
[2026-01-08 05:39:28] 2026-01-08 04:38:53,315 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 05:39:28] 2026-01-08 04:38:53,315 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 05:39:28] 2026-01-08 04:38:53,316 | INFO     | update_server=False
[2026-01-08 05:39:28] 2026-01-08 04:38:53,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 05:39:28] 2026-01-08 04:38:53,316 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:39:28] 2026-01-08 04:38:53,317 | INFO     | aborting loop
[2026-01-08 05:39:28] 2026-01-08 04:38:53,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 05:39:28] 2026-01-08 04:38:53,619 | INFO     | all payload control threads have been joined
[2026-01-08 05:39:28] 2026-01-08 04:38:53,852 | INFO     | all data control threads have been joined
[2026-01-08 05:39:28] 2026-01-08 04:38:54,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:39:28] 2026-01-08 04:38:54,322 | INFO     | [job] retrieve thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:54,323 | INFO     | [job] job monitor thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:54,575 | INFO     | [job] validate thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:54,599 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:54,626 | INFO     | [payload] control thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:54,672 | INFO     | all job control threads have been joined
[2026-01-08 05:39:28] 2026-01-08 04:38:54,858 | INFO     | [data] control thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:54,956 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:55,003 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:55,246 | INFO     | [data] copytool_in thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:55,257 | INFO     | [payload] validate_post thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:55,284 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:55,288 | INFO     | [job] queue monitor thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:55,332 | INFO     | [data] copytool_out thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:55,339 | INFO     | [payload] failed_post thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:55,678 | INFO     | [job] control thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:38:56,460 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 05:39:28] 2026-01-08 04:39:00,469 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 05:39:28] 2026-01-08 04:39:17,465 | INFO     | [monitor] cgroup control has ended
[2026-01-08 05:39:28] 2026-01-08 04:39:18,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139855972194112)>', '<ExcThread(monitor, started 139855384266496)>']
[2026-01-08 05:39:28] 2026-01-08 04:39:21,838 | INFO     | 22459s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-08 05:39:28] 2026-01-08 04:39:22,961 | INFO     | PID=4423 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 05:39:28] 2026-01-08 04:39:22,962 | INFO     | .. there are 2 such processes running
[2026-01-08 05:39:28] 2026-01-08 04:39:22,962 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 05:39:28] 2026-01-08 04:39:22,962 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 05:39:28] 2026-01-08 04:39:22,962 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 05:39:28] 2026-01-08 04:39:22,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 05:39:28] 2026-01-08 04:39:22,962 | INFO     | [monitor] control thread has ended
[2026-01-08 05:39:28] 2026-01-08 04:39:23,231 | INFO     | all workflow threads have been joined
[2026-01-08 05:39:28] 2026-01-08 04:39:23,232 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 05:39:28] 2026-01-08 04:39:23,232 | INFO     | traces error code: 0
[2026-01-08 05:39:28] 2026-01-08 04:39:23,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 05:39:28] 2026-01-08 04:39:23,709 [wrapper] ==== pilot stdout END ====
[2026-01-08 05:39:28] 2026-01-08 04:39:23,800 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 05:39:28] 2026-01-08 04:39:23,862 [wrapper] pilotpid: 4423
[2026-01-08 05:39:28] 2026-01-08 04:39:23,961 [wrapper] Pilot exit status: 0
[2026-01-08 05:39:28] 2026-01-08 04:39:24,467 [wrapper] pandaids: 6962317299
[2026-01-08 05:39:28] 2026-01-08 04:39:25,316 [wrapper] cleanup supervisor_pilot 10191 4424
[2026-01-08 05:39:28] 2026-01-08 04:39:25,380 [wrapper] Test setup, not cleaning
[2026-01-08 05:39:28] 2026-01-08 04:39:25,456 [wrapper] apfmon messages muted
[2026-01-08 05:39:28] 2026-01-08 04:39:25,560 [wrapper] ==== wrapper stdout END ====
[2026-01-08 05:39:28] 2026-01-08 04:39:25,619 [wrapper] ==== wrapper stderr END ====
[2026-01-08 05:39:29]  *** Error codes and diagnostics ***
[2026-01-08 05:39:29]     "exeErrorCode": 0,
[2026-01-08 05:39:29]     "exeErrorDiag": "",
[2026-01-08 05:39:29]     "pilotErrorCode": 0,
[2026-01-08 05:39:29]     "pilotErrorDiag": "",
[2026-01-08 05:39:29]  *** Listing of results directory ***
[2026-01-08 05:39:29] total 449116
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 05:39:29] -rwx------. 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc       100 Jan  7 23:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 05:39:29] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 23:18 run_atlas
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc       105 Jan  7 23:18 job.xml
[2026-01-08 05:39:29] -rw-r--r--. 2 boinc boinc 226718411 Jan  7 23:18 EVNT.47898824._000531.pool.root.1
[2026-01-08 05:39:29] drwxrwx--x. 2 boinc boinc        68 Jan  7 23:18 shared
[2026-01-08 05:39:29] -rw-r--r--. 2 boinc boinc    592396 Jan  7 23:18 input.tar.gz
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc      6388 Jan  7 23:18 init_data.xml
[2026-01-08 05:39:29] -rw-r--r--. 2 boinc boinc     15847 Jan  7 23:18 start_atlas.sh
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc         0 Jan  7 23:18 boinc_lockfile
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc      2518 Jan  7 23:19 pandaJob.out
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc    989785 Jan  7 23:24 agis_schedconf.cvmfs.json
[2026-01-08 05:39:29] drwx------. 5 boinc boinc      4096 Jan  7 23:24 pilot3
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc 222181529 Jan  8 05:35 HITS.47898826._012538.pool.root.1
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc       531 Jan  8 05:35 boinc_task_state.xml
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc      1016 Jan  8 05:36 memory_monitor_summary.json
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc   1516240 Jan  8 05:36 agis_ddmendpoints.agis.ALL.json
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc    574894 Jan  8 05:36 log.47898826._012538.job.log.tgz.1
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc        95 Jan  8 05:38 pilot_heartbeat.json
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc      7779 Jan  8 05:38 heartbeat.json
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc      4999 Jan  8 05:39 pilotlog.txt
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc   2971868 Jan  8 05:39 log.47898826._012538.job.log.1
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc       357 Jan  8 05:39 output.list
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc       620 Jan  8 05:39 runtime_log
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc   3563520 Jan  8 05:39 result.tar.gz
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc      8817 Jan  8 05:39 runtime_log.err
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc       657 Jan  8 05:39 rimKDmBlpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcedKDmw4GV1m.diag
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc      8192 Jan  8 05:39 boinc_mmap_file
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc        28 Jan  8 05:39 wrapper_checkpoint.txt
[2026-01-08 05:39:29] -rw-r--r--. 1 boinc boinc     20829 Jan  8 05:39 stderr.txt
[2026-01-08 05:39:29] HITS file was successfully produced:
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc 222181529 Jan  8 05:35 shared/HITS.pool.root.1
[2026-01-08 05:39:29]  *** Contents of shared directory: ***
[2026-01-08 05:39:29] total 442460
[2026-01-08 05:39:29] -rw-r--r--. 2 boinc boinc 226718411 Jan  7 23:18 ATLAS.root_0
[2026-01-08 05:39:29] -rw-r--r--. 2 boinc boinc    592396 Jan  7 23:18 input.tar.gz
[2026-01-08 05:39:29] -rw-r--r--. 2 boinc boinc     15847 Jan  7 23:18 start_atlas.sh
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc 222181529 Jan  8 05:35 HITS.pool.root.1
[2026-01-08 05:39:29] -rw-------. 1 boinc boinc   3563520 Jan  8 05:39 result.tar.gz
05:39:30 (32762): run_atlas exited; CPU time 82271.010908
05:39:30 (32762): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN