Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:39:34 (14887): wrapper (7.7.26015): starting
05:39:34 (14887): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 05:39:34] Arguments: --nthreads 8
[2026-01-08 05:39:34] Threads: 8
[2026-01-08 05:39:34] Checking for CVMFS
[2026-01-08 05:39:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 05:39:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 05:39:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 05:39:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 05:39:38] 2.11.2.0 32220 33507 97392 154891 2 61 16802238 25165824 96 130560 0 14584327 99.805 9231652 4070 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 05:39:38] CVMFS is ok
[2026-01-08 05:39:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 05:39:38] Checking for apptainer binary...
[2026-01-08 05:39:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 05:39:38] Running /usr/bin/apptainer --version
[2026-01-08 05:39:38] apptainer version 1.3.2-1.el7
[2026-01-08 05:39:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 05:39:45] cg-vwn447.simple-grid.lan
[2026-01-08 05:39:45] apptainer works
[2026-01-08 05:39:45] Set ATHENA_PROC_NUMBER=8
[2026-01-08 05:39:45] Set ATHENA_CORE_NUMBER=8
[2026-01-08 05:39:45] Starting ATLAS job with PandaID=6962317254
[2026-01-08 05:39:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 11:51:11]  *** The last 200 lines of the pilot log: ***
[2026-01-08 11:51:11] 2026-01-08 10:50:21,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 11:51:11] 2026-01-08 10:50:21,700 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 11:51:11] 2026-01-08 10:50:21,701 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 11:51:11] 2026-01-08 10:50:21,703 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6962317254/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 11:51:11] 2026-01-08 10:50:21,704 | INFO     | extracted standard info from prmon json
[2026-01-08 11:51:11] 2026-01-08 10:50:21,704 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 11:51:11] 2026-01-08 10:50:21,704 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 11:51:11] 2026-01-08 10:50:21,704 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 11:51:11] 2026-01-08 10:50:21,705 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 11:51:11] 2026-01-08 10:50:21,716 | INFO     | fitting pss+swap vs Time
[2026-01-08 11:51:11] 2026-01-08 10:50:21,717 | INFO     | sum of square deviations: 13181084350.0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,721 | INFO     | sum of deviations: 221598679701.0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,722 | INFO     | mean x: 1767858645.0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,722 | INFO     | mean y: 2433192.0573065905
[2026-01-08 11:51:11] 2026-01-08 10:50:21,722 | INFO     | intersect: -29718576948.508167
[2026-01-08 11:51:11] 2026-01-08 10:50:21,722 | INFO     | chi2: 7.794617693413311
[2026-01-08 11:51:11] 2026-01-08 10:50:21,723 | INFO     | sum of square deviations: 12622636670.0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,734 | INFO     | sum of deviations: 241140185586.50003
[2026-01-08 11:51:11] 2026-01-08 10:50:21,735 | INFO     | mean x: 1767858492.5
[2026-01-08 11:51:11] 2026-01-08 10:50:21,735 | INFO     | mean y: 2438454.8110465114
[2026-01-08 11:51:11] 2026-01-08 10:50:21,735 | INFO     | intersect: -33770356890.34089
[2026-01-08 11:51:11] 2026-01-08 10:50:21,736 | INFO     | chi2: 7.062077686294009
[2026-01-08 11:51:11] 2026-01-08 10:50:21,736 | INFO     | current chi2=7.062077686294009 (change=9.398023558465493 %)
[2026-01-08 11:51:11] 2026-01-08 10:50:21,736 | INFO     | right removable region: 343
[2026-01-08 11:51:11] 2026-01-08 10:50:21,736 | INFO     | sum of square deviations: 12622636670.0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,741 | INFO     | sum of deviations: 101047957320.49997
[2026-01-08 11:51:11] 2026-01-08 10:50:21,741 | INFO     | mean x: 1767858797.5
[2026-01-08 11:51:11] 2026-01-08 10:50:21,741 | INFO     | mean y: 2466093.194767442
[2026-01-08 11:51:11] 2026-01-08 10:50:21,741 | INFO     | intersect: -14149768894.525148
[2026-01-08 11:51:11] 2026-01-08 10:50:21,742 | INFO     | chi2: 3.073038310577095
[2026-01-08 11:51:11] 2026-01-08 10:50:21,742 | INFO     | current chi2=3.073038310577095 (change=60.574868050630556 %)
[2026-01-08 11:51:11] 2026-01-08 10:50:21,742 | INFO     | sum of square deviations: 12080189290.0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,755 | INFO     | sum of deviations: 16672878436.000008
[2026-01-08 11:51:11] 2026-01-08 10:50:21,756 | INFO     | mean x: 1767858950.0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,756 | INFO     | mean y: 2489780.365781711
[2026-01-08 11:51:11] 2026-01-08 10:50:21,756 | INFO     | intersect: -2437480046.079265
[2026-01-08 11:51:11] 2026-01-08 10:50:21,757 | INFO     | chi2: 0.8582239256107143
[2026-01-08 11:51:11] 2026-01-08 10:50:21,757 | INFO     | current chi2=0.8582239256107143 (change=72.07246253140444 %)
[2026-01-08 11:51:11] 2026-01-08 10:50:21,757 | INFO     | sum of square deviations: 11553509647.5
[2026-01-08 11:51:11] 2026-01-08 10:50:21,761 | INFO     | sum of deviations: 5845477133.999996
[2026-01-08 11:51:11] 2026-01-08 10:50:21,761 | INFO     | mean x: 1767859102.5
[2026-01-08 11:51:11] 2026-01-08 10:50:21,762 | INFO     | mean y: 2492895.7005988024
[2026-01-08 11:51:11] 2026-01-08 10:50:21,762 | INFO     | intersect: -891952192.8559868
[2026-01-08 11:51:11] 2026-01-08 10:50:21,762 | INFO     | chi2: 0.8030645715312116
[2026-01-08 11:51:11] 2026-01-08 10:50:21,762 | INFO     | current chi2=0.8030645715312116 (change=6.427151752993969 %)
[2026-01-08 11:51:11] 2026-01-08 10:50:21,763 | INFO     | left removable region: 30
[2026-01-08 11:51:11] 2026-01-08 10:50:21,773 | INFO     | sum of square deviations: 9508390372.0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,788 | INFO     | sum of deviations: 18916094632.000004
[2026-01-08 11:51:11] 2026-01-08 10:50:21,788 | INFO     | mean x: 1767859377.0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,788 | INFO     | mean y: 2501995.2523961663
[2026-01-08 11:51:11] 2026-01-08 10:50:21,789 | INFO     | intersect: -3514496567.393552
[2026-01-08 11:51:11] 2026-01-08 10:50:21,789 | INFO     | chi2: 0.0020190380074988426
[2026-01-08 11:51:11] 2026-01-08 10:50:21,789 | INFO     | current memory leak: 1.99 B/s (using 313 data points, chi2=0.00)
[2026-01-08 11:51:11] 2026-01-08 10:50:21,790 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 11:51:11] 2026-01-08 10:50:21,790 | INFO     | ..............................
[2026-01-08 11:51:11] 2026-01-08 10:50:21,790 | INFO     | . Timing measurements:
[2026-01-08 11:51:11] 2026-01-08 10:50:21,791 | INFO     | . get job = 0 s
[2026-01-08 11:51:11] 2026-01-08 10:50:21,791 | INFO     | . initial setup = 12 s
[2026-01-08 11:51:11] 2026-01-08 10:50:21,791 | INFO     | . payload setup = 157 s
[2026-01-08 11:51:11] 2026-01-08 10:50:21,791 | INFO     | . stage-in = 0 s
[2026-01-08 11:51:11] 2026-01-08 10:50:21,791 | INFO     | . payload execution = 21442 s
[2026-01-08 11:51:11] 2026-01-08 10:50:21,791 | INFO     | . stage-out = 6 s
[2026-01-08 11:51:11] 2026-01-08 10:50:21,791 | INFO     | . log creation = 1 s
[2026-01-08 11:51:11] 2026-01-08 10:50:21,791 | INFO     | ..............................
[2026-01-08 11:51:11] 2026-01-08 10:50:21,958 | INFO     | 
[2026-01-08 11:51:11] 2026-01-08 10:50:21,959 | INFO     | job summary report
[2026-01-08 11:51:11] 2026-01-08 10:50:21,959 | INFO     | --------------------------------------------------
[2026-01-08 11:51:11] 2026-01-08 10:50:21,959 | INFO     | PanDA job id: 6962317254
[2026-01-08 11:51:11] 2026-01-08 10:50:21,959 | INFO     | task id: 47898826
[2026-01-08 11:51:11] 2026-01-08 10:50:21,959 | INFO     | errors: (none)
[2026-01-08 11:51:11] 2026-01-08 10:50:21,959 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 11:51:11] 2026-01-08 10:50:21,959 | INFO     | pilot state: finished 
[2026-01-08 11:51:11] 2026-01-08 10:50:21,959 | INFO     | transexitcode: 0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,959 | INFO     | exeerrorcode: 0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,960 | INFO     | exeerrordiag: 
[2026-01-08 11:51:11] 2026-01-08 10:50:21,960 | INFO     | exitcode: 0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,960 | INFO     | exitmsg: OK
[2026-01-08 11:51:11] 2026-01-08 10:50:21,960 | INFO     | cpuconsumptiontime: 80732 s
[2026-01-08 11:51:11] 2026-01-08 10:50:21,960 | INFO     | nevents: 400
[2026-01-08 11:51:11] 2026-01-08 10:50:21,960 | INFO     | neventsw: 0
[2026-01-08 11:51:11] 2026-01-08 10:50:21,960 | INFO     | pid: 25077
[2026-01-08 11:51:11] 2026-01-08 10:50:21,960 | INFO     | pgrp: 25077
[2026-01-08 11:51:11] 2026-01-08 10:50:21,960 | INFO     | corecount: 8
[2026-01-08 11:51:11] 2026-01-08 10:50:21,961 | INFO     | event service: False
[2026-01-08 11:51:11] 2026-01-08 10:50:21,961 | INFO     | sizes: {0: 2283138, 1: 2283994, 2: 2283994, 12: 2284022, 23: 2284050, 34: 2284078, 45: 2284234, 55: 2284262, 66: 2284290, 77: 2284318, 88: 2284374, 98: 2284682, 10
[2026-01-08 11:51:11] 2026-01-08 10:50:21,961 | INFO     | --------------------------------------------------
[2026-01-08 11:51:11] 2026-01-08 10:50:21,961 | INFO     | 
[2026-01-08 11:51:11] 2026-01-08 10:50:21,961 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-08 11:51:11] 2026-01-08 10:50:22,507 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,507 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,507 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,508 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,508 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,508 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,508 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,508 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,508 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,508 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,508 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,508 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,509 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,509 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,509 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,509 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,509 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 11:51:11] 2026-01-08 10:50:22,509 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,509 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 11:51:11] 2026-01-08 10:50:22,510 | INFO     | job 6962317254 has completed (purged errors)
[2026-01-08 11:51:11] 2026-01-08 10:50:22,510 | INFO     | overall cleanup function is called
[2026-01-08 11:51:11] 2026-01-08 10:50:23,518 | INFO     | --- collectZombieJob: --- 10, [25077]
[2026-01-08 11:51:11] 2026-01-08 10:50:23,519 | INFO     | zombie collector waiting for pid 25077
[2026-01-08 11:51:11] 2026-01-08 10:50:23,519 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 11:51:11] 2026-01-08 10:50:23,519 | INFO     | collected zombie processes
[2026-01-08 11:51:11] 2026-01-08 10:50:23,519 | INFO     | will attempt to kill all subprocesses of pid=25077
[2026-01-08 11:51:11] 2026-01-08 10:50:23,610 | INFO     | process IDs to be killed: [25077] (in reverse order)
[2026-01-08 11:51:11] 2026-01-08 10:50:24,549 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 11:51:11] 2026-01-08 10:50:24,549 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 11:51:11] 2026-01-08 10:50:24,552 | INFO     | did not find any defunct processes belonging to 25077
[2026-01-08 11:51:11] 2026-01-08 10:50:24,553 | INFO     | did not find any defunct processes belonging to 25077
[2026-01-08 11:51:11] 2026-01-08 10:50:24,554 | INFO     | ready for new job
[2026-01-08 11:51:11] 2026-01-08 10:50:24,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 11:51:11] 2026-01-08 10:50:24,556 | INFO     | ***************************************
[2026-01-08 11:51:11] 2026-01-08 10:50:24,556 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 11:51:11] 2026-01-08 10:50:24,557 | INFO     | ***************************************
[2026-01-08 11:51:11] 2026-01-08 10:50:24,557 | INFO     | 
[2026-01-08 11:51:11] 2026-01-08 10:50:24,557 | INFO     | pilot is running in a VM
[2026-01-08 11:51:11] 2026-01-08 10:50:24,557 | INFO     | architecture information:
[2026-01-08 11:51:11] 2026-01-08 10:50:24,575 | INFO     | executing command: cat /etc/os-release
[2026-01-08 11:51:11] 2026-01-08 10:50:25,019 | INFO     | cat /etc/os-release:
[2026-01-08 11:51:11] NAME="CentOS Linux"
[2026-01-08 11:51:11] VERSION="7 (Core)"
[2026-01-08 11:51:11] ID="centos"
[2026-01-08 11:51:11] ID_LIKE="rhel fedora"
[2026-01-08 11:51:11] VERSION_ID="7"
[2026-01-08 11:51:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 11:51:11] ANSI_COLOR="0;31"
[2026-01-08 11:51:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 11:51:11] HOME_URL="https://www.centos.org/"
[2026-01-08 11:51:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 11:51:11] 
[2026-01-08 11:51:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 11:51:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 11:51:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 11:51:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 11:51:11] 
[2026-01-08 11:51:11] 2026-01-08 10:50:25,019 | INFO     | ***************************************
[2026-01-08 11:51:11] 2026-01-08 10:50:25,523 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-08 11:51:11] 2026-01-08 10:50:25,832 | INFO     | sufficient remaining disk space (497007198208 B)
[2026-01-08 11:51:11] 2026-01-08 10:50:25,832 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 11:51:11] 2026-01-08 10:50:25,833 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 11:51:11] 2026-01-08 10:50:25,833 | INFO     | update_server=False
[2026-01-08 11:51:11] 2026-01-08 10:50:25,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 11:51:11] 2026-01-08 10:50:25,833 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:51:11] 2026-01-08 10:50:25,834 | INFO     | aborting loop
[2026-01-08 11:51:11] 2026-01-08 10:50:26,057 | INFO     | all payload control threads have been joined
[2026-01-08 11:51:11] 2026-01-08 10:50:26,425 | INFO     | all data control threads have been joined
[2026-01-08 11:51:11] 2026-01-08 10:50:26,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 11:51:11] 2026-01-08 10:50:26,839 | INFO     | [job] retrieve thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:26,843 | INFO     | [job] job monitor thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:26,892 | INFO     | all job control threads have been joined
[2026-01-08 11:51:11] 2026-01-08 10:50:26,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:51:11] 2026-01-08 10:50:26,991 | INFO     | [job] validate thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:27,005 | INFO     | [payload] validate_post thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:27,063 | INFO     | [payload] control thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:27,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 11:51:11] 2026-01-08 10:50:27,125 | INFO     | [payload] failed_post thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:27,313 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:27,396 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:27,431 | INFO     | [data] control thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:27,444 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:27,898 | INFO     | [job] control thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:27,978 | INFO     | [job] queue monitor thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:28,132 | INFO     | [data] copytool_in thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:28,312 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:28,802 | INFO     | [data] copytool_out thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:31,105 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 11:51:11] 2026-01-08 10:50:54,231 | INFO     | PID=18605 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 11:51:11] 2026-01-08 10:50:54,231 | INFO     | .. there are 2 such processes running
[2026-01-08 11:51:11] 2026-01-08 10:50:54,232 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 11:51:11] 2026-01-08 10:50:54,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 11:51:11] 2026-01-08 10:50:54,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 11:51:11] 2026-01-08 10:51:01,391 | INFO     | [monitor] cgroup control has ended
[2026-01-08 11:51:11] 2026-01-08 10:51:01,932 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334763181888)>', '<ExcThread(monitor, started 140334457661184)>']
[2026-01-08 11:51:11] 2026-01-08 10:51:02,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 11:51:11] 2026-01-08 10:51:02,282 | INFO     | [monitor] control thread has ended
[2026-01-08 11:51:11] 2026-01-08 10:51:06,958 | INFO     | all workflow threads have been joined
[2026-01-08 11:51:11] 2026-01-08 10:51:06,959 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 11:51:11] 2026-01-08 10:51:06,959 | INFO     | traces error code: 0
[2026-01-08 11:51:11] 2026-01-08 10:51:06,959 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 11:51:11] 2026-01-08 10:51:07,344 [wrapper] ==== pilot stdout END ====
[2026-01-08 11:51:11] 2026-01-08 10:51:07,492 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 11:51:11] 2026-01-08 10:51:07,577 [wrapper] pilotpid: 18605
[2026-01-08 11:51:11] 2026-01-08 10:51:07,640 [wrapper] Pilot exit status: 0
[2026-01-08 11:51:11] 2026-01-08 10:51:08,055 [wrapper] pandaids: 6962317254
[2026-01-08 11:51:11] 2026-01-08 10:51:09,132 [wrapper] cleanup supervisor_pilot 24360 18606
[2026-01-08 11:51:11] 2026-01-08 10:51:09,231 [wrapper] Test setup, not cleaning
[2026-01-08 11:51:11] 2026-01-08 10:51:09,314 [wrapper] apfmon messages muted
[2026-01-08 11:51:11] 2026-01-08 10:51:09,434 [wrapper] ==== wrapper stdout END ====
[2026-01-08 11:51:11] 2026-01-08 10:51:09,547 [wrapper] ==== wrapper stderr END ====
[2026-01-08 11:51:11]  *** Error codes and diagnostics ***
[2026-01-08 11:51:11]     "exeErrorCode": 0,
[2026-01-08 11:51:11]     "exeErrorDiag": "",
[2026-01-08 11:51:11]     "pilotErrorCode": 0,
[2026-01-08 11:51:11]     "pilotErrorDiag": "",
[2026-01-08 11:51:11]  *** Listing of results directory ***
[2026-01-08 11:51:11] total 439208
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 11:51:11] -rwx------. 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc       100 Jan  8 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 11:51:11] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 05:39 run_atlas
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc       105 Jan  8 05:39 job.xml
[2026-01-08 11:51:11] -rw-r--r--. 2 boinc boinc 221592730 Jan  8 05:39 EVNT.47898824._000528.pool.root.1
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc      6388 Jan  8 05:39 init_data.xml
[2026-01-08 11:51:11] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:39 start_atlas.sh
[2026-01-08 11:51:11] drwxrwx--x. 2 boinc boinc        68 Jan  8 05:39 shared
[2026-01-08 11:51:11] -rw-r--r--. 2 boinc boinc    592398 Jan  8 05:39 input.tar.gz
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc         0 Jan  8 05:39 boinc_lockfile
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc      2517 Jan  8 05:39 pandaJob.out
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc    989835 Jan  8 05:44 agis_schedconf.cvmfs.json
[2026-01-08 11:51:11] drwx------. 5 boinc boinc      4096 Jan  8 05:44 pilot3
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc 217311129 Jan  8 11:46 HITS.47898826._012493.pool.root.1
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc       531 Jan  8 11:47 boinc_task_state.xml
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc      1015 Jan  8 11:48 memory_monitor_summary.json
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc   1516240 Jan  8 11:48 agis_ddmendpoints.agis.ALL.json
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc    547217 Jan  8 11:48 log.47898826._012493.job.log.tgz.1
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc      7779 Jan  8 11:50 heartbeat.json
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc        95 Jan  8 11:50 pilot_heartbeat.json
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc      8192 Jan  8 11:50 boinc_mmap_file
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc        28 Jan  8 11:51 wrapper_checkpoint.txt
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc      4884 Jan  8 11:51 pilotlog.txt
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc   2927423 Jan  8 11:51 log.47898826._012493.job.log.1
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc       357 Jan  8 11:51 output.list
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc       620 Jan  8 11:51 runtime_log
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc   3491840 Jan  8 11:51 result.tar.gz
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc       657 Jan  8 11:51 xXZNDmAlpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuddKDmFAN9Hn.diag
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc      8817 Jan  8 11:51 runtime_log.err
[2026-01-08 11:51:11] -rw-r--r--. 1 boinc boinc     20802 Jan  8 11:51 stderr.txt
[2026-01-08 11:51:11] HITS file was successfully produced:
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc 217311129 Jan  8 11:46 shared/HITS.pool.root.1
[2026-01-08 11:51:11]  *** Contents of shared directory: ***
[2026-01-08 11:51:11] total 432628
[2026-01-08 11:51:11] -rw-r--r--. 2 boinc boinc 221592730 Jan  8 05:39 ATLAS.root_0
[2026-01-08 11:51:11] -rw-r--r--. 2 boinc boinc     15847 Jan  8 05:39 start_atlas.sh
[2026-01-08 11:51:11] -rw-r--r--. 2 boinc boinc    592398 Jan  8 05:39 input.tar.gz
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc 217311129 Jan  8 11:46 HITS.pool.root.1
[2026-01-08 11:51:11] -rw-------. 1 boinc boinc   3491840 Jan  8 11:51 result.tar.gz
11:51:13 (14887): run_atlas exited; CPU time 80961.522582
11:51:13 (14887): called boinc_finish(0)

</stderr_txt>
]]>

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