Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:23:18 (2586735): wrapper (7.7.26015): starting
03:23:18 (2586735): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 03:23:18] Arguments: --nthreads 4
[2026-01-08 03:23:18] Threads: 4
[2026-01-08 03:23:18] Checking for CVMFS
[2026-01-08 03:23:18] No cvmfs_config command found, will try listing directly
[2026-01-08 03:23:18] CVMFS is ok
[2026-01-08 03:23:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 03:23:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 03:23:18] Further information can be found at the LHC@home message board.
[2026-01-08 03:23:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 03:23:18] Checking for apptainer binary...
[2026-01-08 03:23:18] which: no apptainer in ((null))
[2026-01-08 03:23:18] apptainer is not installed, using version from CVMFS
[2026-01-08 03:23:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 03:23:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-01-08 03:23:18] apptainer works
[2026-01-08 03:23:18] Set ATHENA_PROC_NUMBER=4
[2026-01-08 03:23:18] Set ATHENA_CORE_NUMBER=4
[2026-01-08 03:23:18] Starting ATLAS job with PandaID=6962320521
[2026-01-08 03:23:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 07:12:58]  *** The last 200 lines of the pilot log: ***
[2026-01-08 07:12:58] 2026-01-08 06:03:46,730 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:12:58] 2026-01-08 06:03:48,103 | INFO     | PID=2593024 has CPU usage=16.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-08 07:12:58] 2026-01-08 06:03:48,103 | INFO     | .. there are 5 such processes running
[2026-01-08 07:12:58] 2026-01-08 06:03:49,103 | INFO     | time since job start (13216s) is within the limit (174528.0s)
[2026-01-08 07:12:58] 2026-01-08 06:03:49,234 | INFO     | monitor loop #907: job 0:6962320521 is in state 'finished'
[2026-01-08 07:12:58] 2026-01-08 06:03:49,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 07:12:58] 2026-01-08 06:03:50,949 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 07:12:58] 2026-01-08 06:03:50,970 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2668.251617187499
[2026-01-08 07:12:58] 2026-01-08 06:03:50,996 | INFO     | using path: /scratch/boinc/var/slot124/slots/0/PanDA_Pilot-6962320521/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 07:12:58] 2026-01-08 06:03:50,997 | INFO     | extracted standard info from prmon json
[2026-01-08 07:12:58] 2026-01-08 06:03:50,997 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 07:12:58] 2026-01-08 06:03:50,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 07:12:58] 2026-01-08 06:03:50,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 07:12:58] 2026-01-08 06:03:50,998 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 07:12:58] 2026-01-08 06:03:51,002 | INFO     | fitting pss+swap vs Time
[2026-01-08 07:12:58] 2026-01-08 06:03:51,002 | INFO     | sum of square deviations: 3124858590.0
[2026-01-08 07:12:58] 2026-01-08 06:03:51,004 | INFO     | sum of deviations: -12125676440.999994
[2026-01-08 07:12:58] 2026-01-08 06:03:51,004 | INFO     | mean x: 1767845604.5
[2026-01-08 07:12:58] 2026-01-08 06:03:51,004 | INFO     | mean y: 2359173.3981481483
[2026-01-08 07:12:58] 2026-01-08 06:03:51,004 | INFO     | intersect: 6862293208.944712
[2026-01-08 07:12:58] 2026-01-08 06:03:51,005 | INFO     | chi2: 1.273380885910584
[2026-01-08 07:12:58] 2026-01-08 06:03:51,005 | INFO     | sum of square deviations: 2912836010.0
[2026-01-08 07:12:58] 2026-01-08 06:03:51,006 | INFO     | sum of deviations: -11703061670.000004
[2026-01-08 07:12:58] 2026-01-08 06:03:51,007 | INFO     | mean x: 1767845452.0
[2026-01-08 07:12:58] 2026-01-08 06:03:51,007 | INFO     | mean y: 2359477.4549763035
[2026-01-08 07:12:58] 2026-01-08 06:03:51,007 | INFO     | intersect: 7105129519.008064
[2026-01-08 07:12:58] 2026-01-08 06:03:51,007 | INFO     | chi2: 1.2726335723070628
[2026-01-08 07:12:58] 2026-01-08 06:03:51,007 | INFO     | current chi2=1.2726335723070628 (change=0.05868735833794199 %)
[2026-01-08 07:12:58] 2026-01-08 06:03:51,007 | INFO     | right removable region: 210
[2026-01-08 07:12:58] 2026-01-08 06:03:51,008 | INFO     | sum of square deviations: 2912836010.0
[2026-01-08 07:12:58] 2026-01-08 06:03:51,009 | INFO     | sum of deviations: -34742820230.0
[2026-01-08 07:12:58] 2026-01-08 06:03:51,009 | INFO     | mean x: 1767845757.0
[2026-01-08 07:12:58] 2026-01-08 06:03:51,009 | INFO     | mean y: 2375207.260663507
[2026-01-08 07:12:58] 2026-01-08 06:03:51,010 | INFO     | intersect: 21088336489.99668
[2026-01-08 07:12:58] 2026-01-08 06:03:51,010 | INFO     | chi2: 0.11354746432904998
[2026-01-08 07:12:58] 2026-01-08 06:03:51,010 | INFO     | current chi2=0.11354746432904998 (change=91.08299287468469 %)
[2026-01-08 07:12:58] 2026-01-08 06:03:51,010 | INFO     | sum of square deviations: 2710627567.5
[2026-01-08 07:12:58] 2026-01-08 06:03:51,012 | INFO     | sum of deviations: -32953339205.5
[2026-01-08 07:12:58] 2026-01-08 06:03:51,012 | INFO     | mean x: 1767845909.5
[2026-01-08 07:12:58] 2026-01-08 06:03:51,012 | INFO     | mean y: 2373837.7718446604
[2026-01-08 07:12:58] 2026-01-08 06:03:51,012 | INFO     | intersect: 21494232998.836452
[2026-01-08 07:12:58] 2026-01-08 06:03:51,012 | INFO     | chi2: 0.10942255742470332
[2026-01-08 07:12:58] 2026-01-08 06:03:51,013 | INFO     | current chi2=0.10942255742470332 (change=3.632760034511267 %)
[2026-01-08 07:12:58] 2026-01-08 06:03:51,013 | INFO     | left removable region: 20
[2026-01-08 07:12:58] 2026-01-08 06:03:51,013 | INFO     | sum of square deviations: 2126802667.5
[2026-01-08 07:12:58] 2026-01-08 06:03:51,014 | INFO     | sum of deviations: -23381393848.499996
[2026-01-08 07:12:58] 2026-01-08 06:03:51,014 | INFO     | mean x: 1767846031.5
[2026-01-08 07:12:58] 2026-01-08 06:03:51,014 | INFO     | mean y: 2367281.1631578947
[2026-01-08 07:12:58] 2026-01-08 06:03:51,015 | INFO     | intersect: 19437505744.007515
[2026-01-08 07:12:58] 2026-01-08 06:03:51,015 | INFO     | chi2: 0.0980735044807136
[2026-01-08 07:12:58] 2026-01-08 06:03:51,015 | INFO     | current memory leak: -10.99 B/s (using 190 data points, chi2=0.10)
[2026-01-08 07:12:58] 2026-01-08 06:03:51,015 | INFO     | could have reported an average CPU frequency of 2613 MHz (11 samples)
[2026-01-08 07:12:58] 2026-01-08 06:03:51,016 | INFO     | ..............................
[2026-01-08 07:12:58] 2026-01-08 06:03:51,016 | INFO     | . Timing measurements:
[2026-01-08 07:12:58] 2026-01-08 06:03:51,016 | INFO     | . get job = 0 s
[2026-01-08 07:12:58] 2026-01-08 06:03:51,016 | INFO     | . initial setup = 1 s
[2026-01-08 07:12:58] 2026-01-08 06:03:51,016 | INFO     | . payload setup = 9 s
[2026-01-08 07:12:58] 2026-01-08 06:03:51,016 | INFO     | . stage-in = 0 s
[2026-01-08 07:12:58] 2026-01-08 06:03:51,016 | INFO     | . payload execution = 13174 s
[2026-01-08 07:12:58] 2026-01-08 06:03:51,016 | INFO     | . stage-out = 1 s
[2026-01-08 07:12:58] 2026-01-08 06:03:51,017 | INFO     | . log creation = 0 s
[2026-01-08 07:12:58] 2026-01-08 06:03:51,017 | INFO     | ..............................
[2026-01-08 07:12:58] 2026-01-08 06:03:51,114 | INFO     | time since job start (13218s) is within the limit (174528.0s)
[2026-01-08 07:12:58] 2026-01-08 06:03:51,517 | INFO     | 
[2026-01-08 07:12:58] 2026-01-08 06:03:51,518 | INFO     | job summary report
[2026-01-08 07:12:58] 2026-01-08 06:03:51,518 | INFO     | --------------------------------------------------
[2026-01-08 07:12:58] 2026-01-08 06:03:51,518 | INFO     | PanDA job id: 6962320521
[2026-01-08 07:12:58] 2026-01-08 06:03:51,518 | INFO     | task id: 47898826
[2026-01-08 07:12:58] 2026-01-08 06:03:51,518 | INFO     | errors: (none)
[2026-01-08 07:12:58] 2026-01-08 06:03:51,518 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 07:12:58] 2026-01-08 06:03:51,518 | INFO     | pilot state: finished 
[2026-01-08 07:12:58] 2026-01-08 06:03:51,519 | INFO     | transexitcode: 0
[2026-01-08 07:12:58] 2026-01-08 06:03:51,519 | INFO     | exeerrorcode: 0
[2026-01-08 07:12:58] 2026-01-08 06:03:51,519 | INFO     | exeerrordiag: 
[2026-01-08 07:12:58] 2026-01-08 06:03:51,519 | INFO     | exitcode: 0
[2026-01-08 07:12:58] 2026-01-08 06:03:51,519 | INFO     | exitmsg: OK
[2026-01-08 07:12:58] 2026-01-08 06:03:51,519 | INFO     | cpuconsumptiontime: 50574 s
[2026-01-08 07:12:58] 2026-01-08 06:03:51,519 | INFO     | nevents: 400
[2026-01-08 07:12:58] 2026-01-08 06:03:51,519 | INFO     | neventsw: 0
[2026-01-08 07:12:58] 2026-01-08 06:03:51,519 | INFO     | pid: 2600522
[2026-01-08 07:12:58] 2026-01-08 06:03:51,519 | INFO     | pgrp: 2600522
[2026-01-08 07:12:58] 2026-01-08 06:03:51,520 | INFO     | corecount: 4
[2026-01-08 07:12:58] 2026-01-08 06:03:51,520 | INFO     | event service: False
[2026-01-08 07:12:58] 2026-01-08 06:03:51,520 | INFO     | sizes: {0: 2283141, 1: 2284009, 8: 2284271, 12: 2284299, 13187: 2315157, 13189: 2324179, 13190: 2324363, 13200: 2324557}
[2026-01-08 07:12:58] 2026-01-08 06:03:51,520 | INFO     | --------------------------------------------------
[2026-01-08 07:12:58] 2026-01-08 06:03:51,520 | INFO     | 
[2026-01-08 07:12:58] 2026-01-08 06:03:51,520 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/0
[2026-01-08 07:12:58] 2026-01-08 06:03:51,555 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,555 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,555 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,557 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 07:12:58] 2026-01-08 06:03:51,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,557 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 07:12:58] 2026-01-08 06:03:51,557 | INFO     | job 6962320521 has completed (purged errors)
[2026-01-08 07:12:58] 2026-01-08 06:03:51,557 | INFO     | overall cleanup function is called
[2026-01-08 07:12:58] 2026-01-08 06:03:52,566 | INFO     | --- collectZombieJob: --- 10, [2600522]
[2026-01-08 07:12:58] 2026-01-08 06:03:52,567 | INFO     | zombie collector waiting for pid 2600522
[2026-01-08 07:12:58] 2026-01-08 06:03:52,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 07:12:58] 2026-01-08 06:03:52,567 | INFO     | collected zombie processes
[2026-01-08 07:12:58] 2026-01-08 06:03:52,567 | INFO     | will attempt to kill all subprocesses of pid=2600522
[2026-01-08 07:12:58] 2026-01-08 06:03:53,292 | INFO     | process IDs to be killed: [2600522] (in reverse order)
[2026-01-08 07:12:58] 2026-01-08 06:03:53,538 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 07:12:58] 2026-01-08 06:03:53,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 07:12:58] 2026-01-08 06:03:53,573 | INFO     | did not find any defunct processes belonging to 2600522
[2026-01-08 07:12:58] 2026-01-08 06:03:53,609 | INFO     | did not find any defunct processes belonging to 2600522
[2026-01-08 07:12:58] 2026-01-08 06:03:53,609 | INFO     | ready for new job
[2026-01-08 07:12:58] 2026-01-08 06:03:53,610 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 07:12:58] 2026-01-08 06:03:53,612 | INFO     | ***************************************
[2026-01-08 07:12:58] 2026-01-08 06:03:53,613 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 07:12:58] 2026-01-08 06:03:53,613 | INFO     | ***************************************
[2026-01-08 07:12:58] 2026-01-08 06:03:53,613 | INFO     | 
[2026-01-08 07:12:58] 2026-01-08 06:03:53,622 | INFO     | architecture information:
[2026-01-08 07:12:58] 2026-01-08 06:03:53,623 | INFO     | executing command: cat /etc/os-release
[2026-01-08 07:12:58] 2026-01-08 06:03:53,647 | INFO     | cat /etc/os-release:
[2026-01-08 07:12:58] NAME="CentOS Linux"
[2026-01-08 07:12:58] VERSION="7 (Core)"
[2026-01-08 07:12:58] ID="centos"
[2026-01-08 07:12:58] ID_LIKE="rhel fedora"
[2026-01-08 07:12:58] VERSION_ID="7"
[2026-01-08 07:12:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 07:12:58] ANSI_COLOR="0;31"
[2026-01-08 07:12:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 07:12:58] HOME_URL="https://www.centos.org/"
[2026-01-08 07:12:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 07:12:58] 
[2026-01-08 07:12:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 07:12:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 07:12:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 07:12:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 07:12:58] 
[2026-01-08 07:12:58] 2026-01-08 06:03:53,648 | INFO     | ***************************************
[2026-01-08 07:12:58] 2026-01-08 06:03:54,152 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/0
[2026-01-08 07:12:58] 2026-01-08 06:03:54,177 | INFO     | sufficient remaining disk space (3330171469824 B)
[2026-01-08 07:12:58] 2026-01-08 06:03:54,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 07:12:58] 2026-01-08 06:03:54,178 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 07:12:58] 2026-01-08 06:03:54,178 | INFO     | update_server=False
[2026-01-08 07:12:58] 2026-01-08 06:03:54,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 07:12:58] 2026-01-08 06:03:54,204 | INFO     | all data control threads have been joined
[2026-01-08 07:12:58] 2026-01-08 06:03:54,245 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 07:12:58] 2026-01-08 06:03:54,246 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 07:12:58] 2026-01-08 06:03:54,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:12:58] 2026-01-08 06:03:54,246 | INFO     | will abort loop
[2026-01-08 07:12:58] 2026-01-08 06:03:55,184 | INFO     | [job] retrieve thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:55,191 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:55,210 | INFO     | [data] control thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:55,251 | INFO     | [job] job monitor thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:55,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 07:12:58] 2026-01-08 06:03:55,441 | INFO     | [payload] failed_post thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:55,447 | INFO     | all payload control threads have been joined
[2026-01-08 07:12:58] 2026-01-08 06:03:55,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 07:12:58] 2026-01-08 06:03:55,606 | INFO     | [data] copytool_in thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:55,749 | INFO     | all job control threads have been joined
[2026-01-08 07:12:58] 2026-01-08 06:03:55,848 | INFO     | [job] validate thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:55,944 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:56,110 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:56,126 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 07:12:58] 2026-01-08 06:03:56,195 | INFO     | [payload] validate_post thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:56,409 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:56,452 | INFO     | [payload] control thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:56,755 | INFO     | [job] control thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:57,131 | INFO     | [job] queue monitor thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:57,341 | INFO     | [data] copytool_out thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:03:59,612 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 07:12:58] 2026-01-08 06:04:25,215 | INFO     | PID=2593024 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 07:12:58] 2026-01-08 06:04:25,215 | INFO     | .. there are 5 such processes running
[2026-01-08 07:12:58] 2026-01-08 06:04:25,216 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 07:12:58] 2026-01-08 06:04:25,216 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 07:12:58] 2026-01-08 06:04:25,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 07:12:58] 2026-01-08 06:04:53,136 | INFO     | [monitor] cgroup control has ended
[2026-01-08 07:12:58] 2026-01-08 06:04:54,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22778926217024)>', '<ExcThread(monitor, started 22778612778752)>']
[2026-01-08 07:12:58] 2026-01-08 06:04:55,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 07:12:58] 2026-01-08 06:04:55,352 | INFO     | [monitor] control thread has ended
[2026-01-08 07:12:58] 2026-01-08 06:04:59,561 | INFO     | all workflow threads have been joined
[2026-01-08 07:12:58] 2026-01-08 06:04:59,561 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 07:12:58] 2026-01-08 06:04:59,562 | INFO     | traces error code: 0
[2026-01-08 07:12:58] 2026-01-08 06:04:59,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 07:12:58] 2026-01-08 06:04:59,770 [wrapper] ==== pilot stdout END ====
[2026-01-08 07:12:58] 2026-01-08 06:04:59,774 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 07:12:58] 2026-01-08 06:04:59,777 [wrapper] pilotpid: 2593024
[2026-01-08 07:12:58] 2026-01-08 06:04:59,780 [wrapper] Pilot exit status: 0
[2026-01-08 07:12:58] 2026-01-08 06:04:59,795 [wrapper] pandaids: 6962320521
[2026-01-08 07:12:58] 2026-01-08 06:04:59,973 [wrapper] cleanup supervisor_pilot 2878768 2593025
[2026-01-08 07:12:58] 2026-01-08 06:04:59,977 [wrapper] Test setup, not cleaning
[2026-01-08 07:12:58] 2026-01-08 06:04:59,982 [wrapper] apfmon messages muted
[2026-01-08 07:12:58] 2026-01-08 06:04:59,987 [wrapper] ==== wrapper stdout END ====
[2026-01-08 07:12:58] 2026-01-08 06:04:59,991 [wrapper] ==== wrapper stderr END ====
[2026-01-08 07:12:58]  *** Error codes and diagnostics ***
[2026-01-08 07:12:58]     "exeErrorCode": 0,
[2026-01-08 07:12:58]     "exeErrorDiag": "",
[2026-01-08 07:12:58]     "pilotErrorCode": 0,
[2026-01-08 07:12:58]     "pilotErrorDiag": "",
[2026-01-08 07:12:58]  *** Listing of results directory ***
[2026-01-08 07:12:58] total 443324
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 07:12:58] -rwx------ 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc      5112 Jan  7 21:59 queuedata.json
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc       100 Jan  8 03:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 07:12:58] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 03:23 run_atlas
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc       105 Jan  8 03:23 job.xml
[2026-01-08 07:12:58] -rw-r--r-- 2 boinc boinc 222527851 Jan  8 03:23 EVNT.47898824._000670.pool.root.1
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc      6691 Jan  8 03:23 init_data.xml
[2026-01-08 07:12:58] -rw-r--r-- 2 boinc boinc     15847 Jan  8 03:23 start_atlas.sh
[2026-01-08 07:12:58] drwxrwx--x 2 boinc boinc      4096 Jan  8 03:23 shared
[2026-01-08 07:12:58] -rw-r--r-- 2 boinc boinc    592396 Jan  8 03:23 input.tar.gz
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc         0 Jan  8 03:23 boinc_lockfile
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc      2519 Jan  8 03:23 pandaJob.out
[2026-01-08 07:12:58] -rw------- 1 boinc boinc    989843 Jan  8 03:23 agis_schedconf.cvmfs.json
[2026-01-08 07:12:58] drwx------ 5 boinc boinc      4096 Jan  8 03:23 pilot3
[2026-01-08 07:12:58] -rw------- 1 boinc boinc 223061493 Jan  8 07:02 HITS.47898826._014334.pool.root.1
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc       528 Jan  8 07:03 boinc_task_state.xml
[2026-01-08 07:12:58] -rw------- 1 boinc boinc      1027 Jan  8 07:03 memory_monitor_summary.json
[2026-01-08 07:12:58] -rw------- 1 boinc boinc   1516240 Jan  8 07:03 agis_ddmendpoints.agis.ALL.json
[2026-01-08 07:12:58] -rw------- 1 boinc boinc    396686 Jan  8 07:03 log.47898826._014334.job.log.tgz.1
[2026-01-08 07:12:58] -rw------- 1 boinc boinc      7788 Jan  8 07:03 heartbeat.json
[2026-01-08 07:12:58] -rw------- 1 boinc boinc        95 Jan  8 07:04 pilot_heartbeat.json
[2026-01-08 07:12:58] -rw------- 1 boinc boinc      5021 Jan  8 07:04 pilotlog.txt
[2026-01-08 07:12:58] -rw------- 1 boinc boinc   1833013 Jan  8 07:04 log.47898826._014334.job.log.1
[2026-01-08 07:12:58] -rw------- 1 boinc boinc       357 Jan  8 07:05 output.list
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc       620 Jan  8 07:05 runtime_log
[2026-01-08 07:12:58] -rw------- 1 boinc boinc   2252800 Jan  8 07:05 result.tar.gz
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc      9223 Jan  8 07:05 runtime_log.err
[2026-01-08 07:12:58] -rw------- 1 boinc boinc       665 Jan  8 07:05 edaLDm9kpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJddKDmyuGcHm.diag
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc        26 Jan  8 07:12 wrapper_checkpoint.txt
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc      8192 Jan  8 07:12 boinc_mmap_file
[2026-01-08 07:12:58] -rw-r--r-- 1 boinc boinc     21198 Jan  8 07:12 stderr.txt
[2026-01-08 07:12:58] HITS file was successfully produced:
[2026-01-08 07:12:58] -rw------- 1 boinc boinc 223061493 Jan  8 07:02 shared/HITS.pool.root.1
[2026-01-08 07:12:58]  *** Contents of shared directory: ***
[2026-01-08 07:12:58] total 437952
[2026-01-08 07:12:58] -rw-r--r-- 2 boinc boinc 222527851 Jan  8 03:23 ATLAS.root_0
[2026-01-08 07:12:58] -rw-r--r-- 2 boinc boinc     15847 Jan  8 03:23 start_atlas.sh
[2026-01-08 07:12:58] -rw-r--r-- 2 boinc boinc    592396 Jan  8 03:23 input.tar.gz
[2026-01-08 07:12:58] -rw------- 1 boinc boinc 223061493 Jan  8 07:02 HITS.pool.root.1
[2026-01-08 07:12:58] -rw------- 1 boinc boinc   2252800 Jan  8 07:05 result.tar.gz
07:12:59 (2586735): run_atlas exited; CPU time 51518.476652
07:12:59 (2586735): called boinc_finish(0)

</stderr_txt>
]]>

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