Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:52:13 (28038): wrapper (7.7.26015): starting
04:52:13 (28038): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 04:52:13] Arguments: --nthreads 8
[2026-01-08 04:52:13] Threads: 8
[2026-01-08 04:52:13] Checking for CVMFS
[2026-01-08 04:52:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 04:52:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 04:52:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 04:52:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 04:52:16] 2.11.2.0 10929 33441 94940 154889 1 60 19637435 25165824 96 130560 0 16041864 99.824 9394893 3149 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 04:52:16] CVMFS is ok
[2026-01-08 04:52:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 04:52:16] Checking for apptainer binary...
[2026-01-08 04:52:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 04:52:16] Running /usr/bin/apptainer --version
[2026-01-08 04:52:17] apptainer version 1.3.2-1.el7
[2026-01-08 04:52:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 04:52:40] cg-vwn424.simple-grid.lan
[2026-01-08 04:52:40] apptainer works
[2026-01-08 04:52:40] Set ATHENA_PROC_NUMBER=8
[2026-01-08 04:52:40] Set ATHENA_CORE_NUMBER=8
[2026-01-08 04:52:40] Starting ATLAS job with PandaID=6962319575
[2026-01-08 04:52:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 11:08:31]  *** The last 200 lines of the pilot log: ***
[2026-01-08 11:08:31] 2026-01-08 10:07:36,439 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 11:08:31] 2026-01-08 10:07:36,441 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6962319575/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 11:08:31] 2026-01-08 10:07:36,442 | INFO     | extracted standard info from prmon json
[2026-01-08 11:08:31] 2026-01-08 10:07:36,442 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 11:08:31] 2026-01-08 10:07:36,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 11:08:31] 2026-01-08 10:07:36,443 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 11:08:31] 2026-01-08 10:07:36,443 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 11:08:31] 2026-01-08 10:07:36,454 | INFO     | fitting pss+swap vs Time
[2026-01-08 11:08:31] 2026-01-08 10:07:36,454 | INFO     | sum of square deviations: 13872669410.0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,459 | INFO     | sum of deviations: 175967316649.0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,459 | INFO     | mean x: 1767855930.0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,459 | INFO     | mean y: 2443252.0507042254
[2026-01-08 11:08:31] 2026-01-08 10:07:36,459 | INFO     | intersect: -22421854122.17198
[2026-01-08 11:08:31] 2026-01-08 10:07:36,460 | INFO     | chi2: 10.03317311726137
[2026-01-08 11:08:31] 2026-01-08 10:07:36,461 | INFO     | sum of square deviations: 13294714387.5
[2026-01-08 11:08:31] 2026-01-08 10:07:36,465 | INFO     | sum of deviations: 221114957112.49994
[2026-01-08 11:08:31] 2026-01-08 10:07:36,465 | INFO     | mean x: 1767855777.5
[2026-01-08 11:08:31] 2026-01-08 10:07:36,465 | INFO     | mean y: 2455057.002857143
[2026-01-08 11:08:31] 2026-01-08 10:07:36,465 | INFO     | intersect: -29400158871.321198
[2026-01-08 11:08:31] 2026-01-08 10:07:36,466 | INFO     | chi2: 8.536506829950275
[2026-01-08 11:08:31] 2026-01-08 10:07:36,466 | INFO     | current chi2=8.536506829950275 (change=14.917177943797121 %)
[2026-01-08 11:08:31] 2026-01-08 10:07:36,466 | INFO     | right removable region: 349
[2026-01-08 11:08:31] 2026-01-08 10:07:36,467 | INFO     | sum of square deviations: 13294714387.5
[2026-01-08 11:08:31] 2026-01-08 10:07:36,471 | INFO     | sum of deviations: 50316554458.49999
[2026-01-08 11:08:31] 2026-01-08 10:07:36,471 | INFO     | mean x: 1767856082.5
[2026-01-08 11:08:31] 2026-01-08 10:07:36,472 | INFO     | mean y: 2476393.757142857
[2026-01-08 11:08:31] 2026-01-08 10:07:36,472 | INFO     | intersect: -6688335026.271319
[2026-01-08 11:08:31] 2026-01-08 10:07:36,472 | INFO     | chi2: 5.026979312313836
[2026-01-08 11:08:31] 2026-01-08 10:07:36,472 | INFO     | current chi2=5.026979312313836 (change=49.896416083309965 %)
[2026-01-08 11:08:31] 2026-01-08 10:07:36,473 | INFO     | sum of square deviations: 12733038740.0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,477 | INFO     | sum of deviations: -48167872066.99999
[2026-01-08 11:08:31] 2026-01-08 10:07:36,477 | INFO     | mean x: 1767856235.0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,478 | INFO     | mean y: 2503117.9449275364
[2026-01-08 11:08:31] 2026-01-08 10:07:36,478 | INFO     | intersect: 6690134774.387077
[2026-01-08 11:08:31] 2026-01-08 10:07:36,478 | INFO     | chi2: 2.1288342052486002
[2026-01-08 11:08:31] 2026-01-08 10:07:36,478 | INFO     | current chi2=2.1288342052486002 (change=57.65182084529541 %)
[2026-01-08 11:08:31] 2026-01-08 10:07:36,479 | INFO     | sum of square deviations: 12187409905.0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,483 | INFO     | sum of deviations: -78719350302.50002
[2026-01-08 11:08:31] 2026-01-08 10:07:36,483 | INFO     | mean x: 1767856387.5
[2026-01-08 11:08:31] 2026-01-08 10:07:36,484 | INFO     | mean y: 2511614.3970588236
[2026-01-08 11:08:31] 2026-01-08 10:07:36,484 | INFO     | intersect: 11421222180.21065
[2026-01-08 11:08:31] 2026-01-08 10:07:36,484 | INFO     | chi2: 1.7237370940415935
[2026-01-08 11:08:31] 2026-01-08 10:07:36,484 | INFO     | current chi2=1.7237370940415935 (change=19.029058731217656 %)
[2026-01-08 11:08:31] 2026-01-08 10:07:36,485 | INFO     | left removable region: 30
[2026-01-08 11:08:31] 2026-01-08 10:07:36,485 | INFO     | sum of square deviations: 10065751520.0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,489 | INFO     | sum of deviations: -25703248652.0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,489 | INFO     | mean x: 1767856662.0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,489 | INFO     | mean y: 2523018.6645768024
[2026-01-08 11:08:31] 2026-01-08 10:07:36,489 | INFO     | intersect: 4516806852.732509
[2026-01-08 11:08:31] 2026-01-08 10:07:36,490 | INFO     | chi2: 0.07405042098732009
[2026-01-08 11:08:31] 2026-01-08 10:07:36,490 | INFO     | current memory leak: -2.55 B/s (using 319 data points, chi2=0.07)
[2026-01-08 11:08:31] 2026-01-08 10:07:36,491 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 11:08:31] 2026-01-08 10:07:36,491 | INFO     | ..............................
[2026-01-08 11:08:31] 2026-01-08 10:07:36,491 | INFO     | . Timing measurements:
[2026-01-08 11:08:31] 2026-01-08 10:07:36,491 | INFO     | . get job = 0 s
[2026-01-08 11:08:31] 2026-01-08 10:07:36,491 | INFO     | . initial setup = 8 s
[2026-01-08 11:08:31] 2026-01-08 10:07:36,492 | INFO     | . payload setup = 138 s
[2026-01-08 11:08:31] 2026-01-08 10:07:36,492 | INFO     | . stage-in = 0 s
[2026-01-08 11:08:31] 2026-01-08 10:07:36,492 | INFO     | . payload execution = 21786 s
[2026-01-08 11:08:31] 2026-01-08 10:07:36,492 | INFO     | . stage-out = 4 s
[2026-01-08 11:08:31] 2026-01-08 10:07:36,492 | INFO     | . log creation = 1 s
[2026-01-08 11:08:31] 2026-01-08 10:07:36,492 | INFO     | ..............................
[2026-01-08 11:08:31] 2026-01-08 10:07:36,677 | INFO     | 
[2026-01-08 11:08:31] 2026-01-08 10:07:36,678 | INFO     | job summary report
[2026-01-08 11:08:31] 2026-01-08 10:07:36,678 | INFO     | --------------------------------------------------
[2026-01-08 11:08:31] 2026-01-08 10:07:36,678 | INFO     | PanDA job id: 6962319575
[2026-01-08 11:08:31] 2026-01-08 10:07:36,678 | INFO     | task id: 47898826
[2026-01-08 11:08:31] 2026-01-08 10:07:36,678 | INFO     | errors: (none)
[2026-01-08 11:08:31] 2026-01-08 10:07:36,678 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 11:08:31] 2026-01-08 10:07:36,678 | INFO     | pilot state: finished 
[2026-01-08 11:08:31] 2026-01-08 10:07:36,678 | INFO     | transexitcode: 0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,678 | INFO     | exeerrorcode: 0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,679 | INFO     | exeerrordiag: 
[2026-01-08 11:08:31] 2026-01-08 10:07:36,679 | INFO     | exitcode: 0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,679 | INFO     | exitmsg: OK
[2026-01-08 11:08:31] 2026-01-08 10:07:36,679 | INFO     | cpuconsumptiontime: 81572 s
[2026-01-08 11:08:31] 2026-01-08 10:07:36,679 | INFO     | nevents: 400
[2026-01-08 11:08:31] 2026-01-08 10:07:36,679 | INFO     | neventsw: 0
[2026-01-08 11:08:31] 2026-01-08 10:07:36,679 | INFO     | pid: 5867
[2026-01-08 11:08:31] 2026-01-08 10:07:36,679 | INFO     | pgrp: 5867
[2026-01-08 11:08:31] 2026-01-08 10:07:36,679 | INFO     | corecount: 8
[2026-01-08 11:08:31] 2026-01-08 10:07:36,680 | INFO     | event service: False
[2026-01-08 11:08:31] 2026-01-08 10:07:36,680 | INFO     | sizes: {0: 2283742, 1: 2283997, 12: 2283997, 23: 2284025, 34: 2284053, 44: 2284081, 55: 2284237, 66: 2284265, 77: 2284293, 87: 2284349, 98: 2284377, 102: 2284947, 
[2026-01-08 11:08:31] 2026-01-08 10:07:36,680 | INFO     | --------------------------------------------------
[2026-01-08 11:08:31] 2026-01-08 10:07:36,680 | INFO     | 
[2026-01-08 11:08:31] 2026-01-08 10:07:36,680 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-08 11:08:31] 2026-01-08 10:07:37,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,172 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,172 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,172 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,173 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,173 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,174 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 11:08:31] 2026-01-08 10:07:37,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,174 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 11:08:31] 2026-01-08 10:07:37,175 | INFO     | job 6962319575 has completed (purged errors)
[2026-01-08 11:08:31] 2026-01-08 10:07:37,175 | INFO     | overall cleanup function is called
[2026-01-08 11:08:31] 2026-01-08 10:07:38,183 | INFO     | --- collectZombieJob: --- 10, [5867]
[2026-01-08 11:08:31] 2026-01-08 10:07:38,184 | INFO     | zombie collector waiting for pid 5867
[2026-01-08 11:08:31] 2026-01-08 10:07:38,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 11:08:31] 2026-01-08 10:07:38,184 | INFO     | collected zombie processes
[2026-01-08 11:08:31] 2026-01-08 10:07:38,184 | INFO     | will attempt to kill all subprocesses of pid=5867
[2026-01-08 11:08:31] 2026-01-08 10:07:38,302 | INFO     | process IDs to be killed: [5867] (in reverse order)
[2026-01-08 11:08:31] 2026-01-08 10:07:39,149 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 11:08:31] 2026-01-08 10:07:39,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 11:08:31] 2026-01-08 10:07:39,152 | INFO     | did not find any defunct processes belonging to 5867
[2026-01-08 11:08:31] 2026-01-08 10:07:39,154 | INFO     | did not find any defunct processes belonging to 5867
[2026-01-08 11:08:31] 2026-01-08 10:07:39,154 | INFO     | ready for new job
[2026-01-08 11:08:31] 2026-01-08 10:07:39,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 11:08:31] 2026-01-08 10:07:39,157 | INFO     | ***************************************
[2026-01-08 11:08:31] 2026-01-08 10:07:39,157 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 11:08:31] 2026-01-08 10:07:39,157 | INFO     | ***************************************
[2026-01-08 11:08:31] 2026-01-08 10:07:39,157 | INFO     | 
[2026-01-08 11:08:31] 2026-01-08 10:07:39,158 | INFO     | pilot is running in a VM
[2026-01-08 11:08:31] 2026-01-08 10:07:39,158 | INFO     | architecture information:
[2026-01-08 11:08:31] 2026-01-08 10:07:39,166 | INFO     | executing command: cat /etc/os-release
[2026-01-08 11:08:31] 2026-01-08 10:07:39,433 | INFO     | cat /etc/os-release:
[2026-01-08 11:08:31] NAME="CentOS Linux"
[2026-01-08 11:08:31] VERSION="7 (Core)"
[2026-01-08 11:08:31] ID="centos"
[2026-01-08 11:08:31] ID_LIKE="rhel fedora"
[2026-01-08 11:08:31] VERSION_ID="7"
[2026-01-08 11:08:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 11:08:31] ANSI_COLOR="0;31"
[2026-01-08 11:08:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 11:08:31] HOME_URL="https://www.centos.org/"
[2026-01-08 11:08:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 11:08:31] 
[2026-01-08 11:08:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 11:08:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 11:08:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 11:08:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 11:08:31] 
[2026-01-08 11:08:31] 2026-01-08 10:07:39,433 | INFO     | ***************************************
[2026-01-08 11:08:31] 2026-01-08 10:07:39,936 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-08 11:08:31] 2026-01-08 10:07:40,225 | INFO     | sufficient remaining disk space (497166581760 B)
[2026-01-08 11:08:31] 2026-01-08 10:07:40,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 11:08:31] 2026-01-08 10:07:40,225 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 11:08:31] 2026-01-08 10:07:40,226 | INFO     | update_server=False
[2026-01-08 11:08:31] 2026-01-08 10:07:40,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 11:08:31] 2026-01-08 10:07:40,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 11:08:31] 2026-01-08 10:07:40,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 11:08:31] 2026-01-08 10:07:40,554 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 11:08:31] 2026-01-08 10:07:40,555 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 11:08:31] 2026-01-08 10:07:40,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:08:31] 2026-01-08 10:07:40,555 | INFO     | will abort loop
[2026-01-08 11:08:31] 2026-01-08 10:07:40,562 | INFO     | all payload control threads have been joined
[2026-01-08 11:08:31] 2026-01-08 10:07:41,074 | INFO     | all data control threads have been joined
[2026-01-08 11:08:31] 2026-01-08 10:07:41,231 | INFO     | [job] retrieve thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:41,289 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:41,560 | INFO     | [job] job monitor thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:41,568 | INFO     | [payload] control thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:41,686 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:08:31] 2026-01-08 10:07:41,735 | INFO     | all job control threads have been joined
[2026-01-08 11:08:31] 2026-01-08 10:07:41,753 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:41,875 | INFO     | [payload] failed_post thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:42,080 | INFO     | [data] control thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:42,225 | INFO     | [job] validate thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:42,235 | INFO     | [data] copytool_out thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:42,464 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:42,524 | INFO     | [data] copytool_in thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:42,658 | INFO     | [payload] validate_post thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:42,670 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:42,692 | INFO     | [job] queue monitor thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:42,741 | INFO     | [job] control thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:07:44,510 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 11:08:31] 2026-01-08 10:08:08,679 | INFO     | PID=31760 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 11:08:31] 2026-01-08 10:08:08,680 | INFO     | .. there are 2 such processes running
[2026-01-08 11:08:31] 2026-01-08 10:08:08,680 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 11:08:31] 2026-01-08 10:08:08,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 11:08:31] 2026-01-08 10:08:08,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 11:08:31] 2026-01-08 10:08:20,772 | INFO     | [monitor] cgroup control has ended
[2026-01-08 11:08:31] 2026-01-08 10:08:21,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485138831168)>', '<ExcThread(monitor, started 140484445972224)>']
[2026-01-08 11:08:31] 2026-01-08 10:08:22,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 11:08:31] 2026-01-08 10:08:22,765 | INFO     | [monitor] control thread has ended
[2026-01-08 11:08:31] 2026-01-08 10:08:26,960 | INFO     | all workflow threads have been joined
[2026-01-08 11:08:31] 2026-01-08 10:08:26,961 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 11:08:31] 2026-01-08 10:08:26,961 | INFO     | traces error code: 0
[2026-01-08 11:08:31] 2026-01-08 10:08:26,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 11:08:31] 2026-01-08 10:08:27,427 [wrapper] ==== pilot stdout END ====
[2026-01-08 11:08:31] 2026-01-08 10:08:27,527 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 11:08:31] 2026-01-08 10:08:27,626 [wrapper] pilotpid: 31760
[2026-01-08 11:08:31] 2026-01-08 10:08:27,739 [wrapper] Pilot exit status: 0
[2026-01-08 11:08:31] 2026-01-08 10:08:28,304 [wrapper] pandaids: 6962319575
[2026-01-08 11:08:31] 2026-01-08 10:08:29,159 [wrapper] cleanup supervisor_pilot  5222 31761
[2026-01-08 11:08:31] 2026-01-08 10:08:29,247 [wrapper] Test setup, not cleaning
[2026-01-08 11:08:31] 2026-01-08 10:08:29,335 [wrapper] apfmon messages muted
[2026-01-08 11:08:31] 2026-01-08 10:08:29,440 [wrapper] ==== wrapper stdout END ====
[2026-01-08 11:08:31] 2026-01-08 10:08:29,481 [wrapper] ==== wrapper stderr END ====
[2026-01-08 11:08:31]  *** Error codes and diagnostics ***
[2026-01-08 11:08:31]     "exeErrorCode": 0,
[2026-01-08 11:08:31]     "exeErrorDiag": "",
[2026-01-08 11:08:31]     "pilotErrorCode": 0,
[2026-01-08 11:08:31]     "pilotErrorDiag": "",
[2026-01-08 11:08:31]  *** Listing of results directory ***
[2026-01-08 11:08:31] total 445728
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 11:08:31] -rwx------. 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:56 queuedata.json
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc       100 Jan  8 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 11:08:31] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 04:52 run_atlas
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc       105 Jan  8 04:52 job.xml
[2026-01-08 11:08:31] -rw-r--r--. 2 boinc boinc 224587506 Jan  8 04:52 EVNT.47898824._000584.pool.root.1
[2026-01-08 11:08:31] -rw-r--r--. 2 boinc boinc     15847 Jan  8 04:52 start_atlas.sh
[2026-01-08 11:08:31] drwxrwx--x. 2 boinc boinc        68 Jan  8 04:52 shared
[2026-01-08 11:08:31] -rw-r--r--. 2 boinc boinc    592391 Jan  8 04:52 input.tar.gz
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc      6389 Jan  8 04:52 init_data.xml
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc         0 Jan  8 04:52 boinc_lockfile
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc      2519 Jan  8 04:52 pandaJob.out
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc    989835 Jan  8 04:56 agis_schedconf.cvmfs.json
[2026-01-08 11:08:31] drwx------. 5 boinc boinc      4096 Jan  8 04:56 pilot3
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc 220932577 Jan  8 11:04 HITS.47898826._013452.pool.root.1
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc       531 Jan  8 11:04 boinc_task_state.xml
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc      1015 Jan  8 11:05 memory_monitor_summary.json
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc   1516240 Jan  8 11:05 agis_ddmendpoints.agis.ALL.json
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc    557040 Jan  8 11:05 log.47898826._013452.job.log.tgz.1
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc        95 Jan  8 11:07 pilot_heartbeat.json
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc      7778 Jan  8 11:07 heartbeat.json
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc      8192 Jan  8 11:07 boinc_mmap_file
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc        28 Jan  8 11:07 wrapper_checkpoint.txt
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc      5070 Jan  8 11:08 pilotlog.txt
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc   2947187 Jan  8 11:08 log.47898826._013452.job.log.1
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc       357 Jan  8 11:08 output.list
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc       620 Jan  8 11:08 runtime_log
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc   3522560 Jan  8 11:08 result.tar.gz
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc      8817 Jan  8 11:08 runtime_log.err
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc       657 Jan  8 11:08 EnZKDmxkpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5hiKDmgI2KZm.diag
[2026-01-08 11:08:31] -rw-r--r--. 1 boinc boinc     20783 Jan  8 11:08 stderr.txt
[2026-01-08 11:08:31] HITS file was successfully produced:
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc 220932577 Jan  8 11:04 shared/HITS.pool.root.1
[2026-01-08 11:08:31]  *** Contents of shared directory: ***
[2026-01-08 11:08:31] total 439116
[2026-01-08 11:08:31] -rw-r--r--. 2 boinc boinc 224587506 Jan  8 04:52 ATLAS.root_0
[2026-01-08 11:08:31] -rw-r--r--. 2 boinc boinc     15847 Jan  8 04:52 start_atlas.sh
[2026-01-08 11:08:31] -rw-r--r--. 2 boinc boinc    592391 Jan  8 04:52 input.tar.gz
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc 220932577 Jan  8 11:04 HITS.pool.root.1
[2026-01-08 11:08:31] -rw-------. 1 boinc boinc   3522560 Jan  8 11:08 result.tar.gz
11:08:33 (28038): run_atlas exited; CPU time 81803.554530
11:08:33 (28038): called boinc_finish(0)

</stderr_txt>
]]>

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