Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:00:57 (16302): wrapper (7.7.26015): starting
23:00:57 (16302): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 23:00:57] Arguments: --nthreads 8
[2026-01-07 23:00:57] Threads: 8
[2026-01-07 23:00:57] Checking for CVMFS
[2026-01-07 23:00:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 23:00:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 23:00:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 23:00:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 23:00:57] 2.11.2.0 10929 33090 94864 154880 0 31 19542524 25165825 96 130560 0 15919246 99.829 9372860 3176 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-07 23:00:57] CVMFS is ok
[2026-01-07 23:00:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:00:57] Checking for apptainer binary...
[2026-01-07 23:00:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 23:00:57] Running /usr/bin/apptainer --version
[2026-01-07 23:00:57] apptainer version 1.3.2-1.el7
[2026-01-07 23:00:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:00:59] cg-vwn424.simple-grid.lan
[2026-01-07 23:00:59] apptainer works
[2026-01-07 23:00:59] Set ATHENA_PROC_NUMBER=8
[2026-01-07 23:00:59] Set ATHENA_CORE_NUMBER=8
[2026-01-07 23:00:59] Starting ATLAS job with PandaID=6962319489
[2026-01-07 23:00:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 04:52:08]  *** The last 200 lines of the pilot log: ***
[2026-01-08 04:52:08] 2026-01-08 03:51:00,814 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 04:52:08] 2026-01-08 03:51:00,815 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 04:52:08] 2026-01-08 03:51:00,817 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6962319489/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 04:52:08] 2026-01-08 03:51:00,818 | INFO     | extracted standard info from prmon json
[2026-01-08 04:52:08] 2026-01-08 03:51:00,818 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 04:52:08] 2026-01-08 03:51:00,818 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 04:52:08] 2026-01-08 03:51:00,818 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 04:52:08] 2026-01-08 03:51:00,819 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 04:52:08] 2026-01-08 03:51:00,829 | INFO     | fitting pss+swap vs Time
[2026-01-08 04:52:08] 2026-01-08 03:51:00,830 | INFO     | sum of square deviations: 12403750705.5
[2026-01-08 04:52:08] 2026-01-08 03:51:00,834 | INFO     | sum of deviations: 45208414916.0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,834 | INFO     | mean x: 1767833717.5
[2026-01-08 04:52:08] 2026-01-08 03:51:00,834 | INFO     | mean y: 2477520.67251462
[2026-01-08 04:52:08] 2026-01-08 03:51:00,835 | INFO     | intersect: -6440812263.263293
[2026-01-08 04:52:08] 2026-01-08 03:51:00,835 | INFO     | chi2: 2.2983064338382553
[2026-01-08 04:52:08] 2026-01-08 03:51:00,836 | INFO     | sum of square deviations: 11867638328.0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,840 | INFO     | sum of deviations: 66737513112.0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,840 | INFO     | mean x: 1767833565.0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,840 | INFO     | mean y: 2483568.8635014836
[2026-01-08 04:52:08] 2026-01-08 03:51:00,840 | INFO     | intersect: -9938905986.770521
[2026-01-08 04:52:08] 2026-01-08 03:51:00,841 | INFO     | chi2: 1.5262503685365565
[2026-01-08 04:52:08] 2026-01-08 03:51:00,841 | INFO     | current chi2=1.5262503685365565 (change=33.59239020239512 %)
[2026-01-08 04:52:08] 2026-01-08 03:51:00,841 | INFO     | sum of square deviations: 11347200663.0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,845 | INFO     | sum of deviations: 65527578386.5
[2026-01-08 04:52:08] 2026-01-08 03:51:00,845 | INFO     | mean x: 1767833412.5
[2026-01-08 04:52:08] 2026-01-08 03:51:00,845 | INFO     | mean y: 2483214.3042168673
[2026-01-08 04:52:08] 2026-01-08 03:51:00,845 | INFO     | intersect: -10206364408.316479
[2026-01-08 04:52:08] 2026-01-08 03:51:00,846 | INFO     | chi2: 1.526499237512933
[2026-01-08 04:52:08] 2026-01-08 03:51:00,846 | INFO     | current chi2=1.526499237512933 (change=-0.016305907700783395 %)
[2026-01-08 04:52:08] 2026-01-08 03:51:00,846 | INFO     | right removable region: 331
[2026-01-08 04:52:08] 2026-01-08 03:51:00,847 | INFO     | sum of square deviations: 11867638328.0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,851 | INFO     | sum of deviations: -8086381796.000002
[2026-01-08 04:52:08] 2026-01-08 03:51:00,851 | INFO     | mean x: 1767833870.0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,851 | INFO     | mean y: 2492580.9080118695
[2026-01-08 04:52:08] 2026-01-08 03:51:00,851 | INFO     | intersect: 1207060771.277643
[2026-01-08 04:52:08] 2026-01-08 03:51:00,852 | INFO     | chi2: 0.8221317663683688
[2026-01-08 04:52:08] 2026-01-08 03:51:00,852 | INFO     | current chi2=0.8221317663683688 (change=64.22880107439029 %)
[2026-01-08 04:52:08] 2026-01-08 03:51:00,853 | INFO     | sum of square deviations: 11347200663.0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,856 | INFO     | sum of deviations: -6372832320.999998
[2026-01-08 04:52:08] 2026-01-08 03:51:00,857 | INFO     | mean x: 1767834022.5
[2026-01-08 04:52:08] 2026-01-08 03:51:00,857 | INFO     | mean y: 2492063.8855421687
[2026-01-08 04:52:08] 2026-01-08 03:51:00,857 | INFO     | intersect: 995345731.617622
[2026-01-08 04:52:08] 2026-01-08 03:51:00,857 | INFO     | chi2: 0.8066601394124154
[2026-01-08 04:52:08] 2026-01-08 03:51:00,857 | INFO     | current chi2=0.8066601394124154 (change=1.8818913936748536 %)
[2026-01-08 04:52:08] 2026-01-08 03:51:00,858 | INFO     | left removable region: 20
[2026-01-08 04:52:08] 2026-01-08 03:51:00,858 | INFO     | sum of square deviations: 9327281860.0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,861 | INFO     | sum of deviations: 13770529912.0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,862 | INFO     | mean x: 1767833992.0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,862 | INFO     | mean y: 2498723.5466237944
[2026-01-08 04:52:08] 2026-01-08 03:51:00,862 | INFO     | intersect: -2607480392.7364955
[2026-01-08 04:52:08] 2026-01-08 03:51:00,863 | INFO     | chi2: 0.001222050740344571
[2026-01-08 04:52:08] 2026-01-08 03:51:00,863 | INFO     | current memory leak: 1.48 B/s (using 311 data points, chi2=0.00)
[2026-01-08 04:52:08] 2026-01-08 03:51:00,863 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-08 04:52:08] 2026-01-08 03:51:00,864 | INFO     | ..............................
[2026-01-08 04:52:08] 2026-01-08 03:51:00,864 | INFO     | . Timing measurements:
[2026-01-08 04:52:08] 2026-01-08 03:51:00,864 | INFO     | . get job = 0 s
[2026-01-08 04:52:08] 2026-01-08 03:51:00,864 | INFO     | . initial setup = 2 s
[2026-01-08 04:52:08] 2026-01-08 03:51:00,864 | INFO     | . payload setup = 8 s
[2026-01-08 04:52:08] 2026-01-08 03:51:00,864 | INFO     | . stage-in = 0 s
[2026-01-08 04:52:08] 2026-01-08 03:51:00,864 | INFO     | . payload execution = 20828 s
[2026-01-08 04:52:08] 2026-01-08 03:51:00,864 | INFO     | . stage-out = 4 s
[2026-01-08 04:52:08] 2026-01-08 03:51:00,865 | INFO     | . log creation = 1 s
[2026-01-08 04:52:08] 2026-01-08 03:51:00,865 | INFO     | ..............................
[2026-01-08 04:52:08] 2026-01-08 03:51:00,998 | INFO     | 
[2026-01-08 04:52:08] 2026-01-08 03:51:00,998 | INFO     | job summary report
[2026-01-08 04:52:08] 2026-01-08 03:51:00,998 | INFO     | --------------------------------------------------
[2026-01-08 04:52:08] 2026-01-08 03:51:00,998 | INFO     | PanDA job id: 6962319489
[2026-01-08 04:52:08] 2026-01-08 03:51:00,999 | INFO     | task id: 47898826
[2026-01-08 04:52:08] 2026-01-08 03:51:00,999 | INFO     | errors: (none)
[2026-01-08 04:52:08] 2026-01-08 03:51:00,999 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 04:52:08] 2026-01-08 03:51:00,999 | INFO     | pilot state: finished 
[2026-01-08 04:52:08] 2026-01-08 03:51:00,999 | INFO     | transexitcode: 0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,999 | INFO     | exeerrorcode: 0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,999 | INFO     | exeerrordiag: 
[2026-01-08 04:52:08] 2026-01-08 03:51:00,999 | INFO     | exitcode: 0
[2026-01-08 04:52:08] 2026-01-08 03:51:00,999 | INFO     | exitmsg: OK
[2026-01-08 04:52:08] 2026-01-08 03:51:00,999 | INFO     | cpuconsumptiontime: 81214 s
[2026-01-08 04:52:08] 2026-01-08 03:51:01,000 | INFO     | nevents: 400
[2026-01-08 04:52:08] 2026-01-08 03:51:01,000 | INFO     | neventsw: 0
[2026-01-08 04:52:08] 2026-01-08 03:51:01,000 | INFO     | pid: 26481
[2026-01-08 04:52:08] 2026-01-08 03:51:01,000 | INFO     | pgrp: 26481
[2026-01-08 04:52:08] 2026-01-08 03:51:01,000 | INFO     | corecount: 8
[2026-01-08 04:52:08] 2026-01-08 03:51:01,000 | INFO     | event service: False
[2026-01-08 04:52:08] 2026-01-08 03:51:01,000 | INFO     | sizes: {0: 2283798, 1: 2283997, 7: 2284259, 12: 2284287, 20841: 2316926, 20842: 2316925, 20846: 2326107, 20848: 2326163, 20963: 2326357}
[2026-01-08 04:52:08] 2026-01-08 03:51:01,000 | INFO     | --------------------------------------------------
[2026-01-08 04:52:08] 2026-01-08 03:51:01,000 | INFO     | 
[2026-01-08 04:52:08] 2026-01-08 03:51:01,001 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-08 04:52:08] 2026-01-08 03:51:01,318 | INFO     | time since job start (20981s) is within the limit (174528.0s)
[2026-01-08 04:52:08] 2026-01-08 03:51:01,556 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,556 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,556 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,556 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,556 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,558 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 04:52:08] 2026-01-08 03:51:01,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,558 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 04:52:08] 2026-01-08 03:51:01,558 | INFO     | job 6962319489 has completed (purged errors)
[2026-01-08 04:52:08] 2026-01-08 03:51:01,558 | INFO     | overall cleanup function is called
[2026-01-08 04:52:08] 2026-01-08 03:51:02,574 | INFO     | --- collectZombieJob: --- 10, [26481]
[2026-01-08 04:52:08] 2026-01-08 03:51:02,574 | INFO     | zombie collector waiting for pid 26481
[2026-01-08 04:52:08] 2026-01-08 03:51:02,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 04:52:08] 2026-01-08 03:51:02,575 | INFO     | collected zombie processes
[2026-01-08 04:52:08] 2026-01-08 03:51:02,575 | INFO     | will attempt to kill all subprocesses of pid=26481
[2026-01-08 04:52:08] 2026-01-08 03:51:02,680 | INFO     | process IDs to be killed: [26481] (in reverse order)
[2026-01-08 04:52:08] 2026-01-08 03:51:03,536 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 04:52:08] 2026-01-08 03:51:03,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 04:52:08] 2026-01-08 03:51:03,539 | INFO     | did not find any defunct processes belonging to 26481
[2026-01-08 04:52:08] 2026-01-08 03:51:03,540 | INFO     | did not find any defunct processes belonging to 26481
[2026-01-08 04:52:08] 2026-01-08 03:51:03,541 | INFO     | ready for new job
[2026-01-08 04:52:08] 2026-01-08 03:51:03,541 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 04:52:08] 2026-01-08 03:51:03,543 | INFO     | ***************************************
[2026-01-08 04:52:08] 2026-01-08 03:51:03,543 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 04:52:08] 2026-01-08 03:51:03,543 | INFO     | ***************************************
[2026-01-08 04:52:08] 2026-01-08 03:51:03,544 | INFO     | 
[2026-01-08 04:52:08] 2026-01-08 03:51:03,544 | INFO     | pilot is running in a VM
[2026-01-08 04:52:08] 2026-01-08 03:51:03,544 | INFO     | architecture information:
[2026-01-08 04:52:08] 2026-01-08 03:51:03,551 | INFO     | executing command: cat /etc/os-release
[2026-01-08 04:52:08] 2026-01-08 03:51:03,870 | INFO     | cat /etc/os-release:
[2026-01-08 04:52:08] NAME="CentOS Linux"
[2026-01-08 04:52:08] VERSION="7 (Core)"
[2026-01-08 04:52:08] ID="centos"
[2026-01-08 04:52:08] ID_LIKE="rhel fedora"
[2026-01-08 04:52:08] VERSION_ID="7"
[2026-01-08 04:52:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 04:52:08] ANSI_COLOR="0;31"
[2026-01-08 04:52:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 04:52:08] HOME_URL="https://www.centos.org/"
[2026-01-08 04:52:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 04:52:08] 
[2026-01-08 04:52:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 04:52:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 04:52:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 04:52:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 04:52:08] 
[2026-01-08 04:52:08] 2026-01-08 03:51:03,870 | INFO     | ***************************************
[2026-01-08 04:52:08] 2026-01-08 03:51:04,373 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-08 04:52:08] 2026-01-08 03:51:04,584 | INFO     | sufficient remaining disk space (497591255040 B)
[2026-01-08 04:52:08] 2026-01-08 03:51:04,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 04:52:08] 2026-01-08 03:51:04,584 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 04:52:08] 2026-01-08 03:51:04,585 | INFO     | update_server=False
[2026-01-08 04:52:08] 2026-01-08 03:51:04,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 04:52:08] 2026-01-08 03:51:04,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:52:08] 2026-01-08 03:51:04,884 | INFO     | aborting loop
[2026-01-08 04:52:08] 2026-01-08 03:51:04,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 04:52:08] 2026-01-08 03:51:05,143 | INFO     | all job control threads have been joined
[2026-01-08 04:52:08] 2026-01-08 03:51:05,364 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 04:52:08] 2026-01-08 03:51:05,590 | INFO     | [job] retrieve thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:05,602 | INFO     | all data control threads have been joined
[2026-01-08 04:52:08] 2026-01-08 03:51:05,703 | INFO     | all payload control threads have been joined
[2026-01-08 04:52:08] 2026-01-08 03:51:05,889 | INFO     | [job] job monitor thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:06,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:52:08] 2026-01-08 03:51:06,149 | INFO     | [job] control thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:06,226 | INFO     | [payload] failed_post thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:06,350 | INFO     | [payload] validate_post thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:06,608 | INFO     | [data] control thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:06,613 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:06,638 | INFO     | [job] validate thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:06,709 | INFO     | [payload] control thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:06,716 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:06,788 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:06,834 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:06,999 | INFO     | [data] copytool_in thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:07,020 | INFO     | [job] queue monitor thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:07,371 | INFO     | [data] copytool_out thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:09,001 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 04:52:08] 2026-01-08 03:51:34,436 | INFO     | PID=20034 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 04:52:08] 2026-01-08 03:51:34,436 | INFO     | .. there are 2 such processes running
[2026-01-08 04:52:08] 2026-01-08 03:51:34,436 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 04:52:08] 2026-01-08 03:51:34,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 04:52:08] 2026-01-08 03:51:34,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 04:52:08] 2026-01-08 03:51:56,051 | INFO     | [monitor] cgroup control has ended
[2026-01-08 04:52:08] 2026-01-08 03:51:57,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232886368064)>', '<ExcThread(monitor, started 140232578012928)>']
[2026-01-08 04:52:08] 2026-01-08 03:51:58,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 04:52:08] 2026-01-08 03:51:58,580 | INFO     | [monitor] control thread has ended
[2026-01-08 04:52:08] 2026-01-08 03:52:02,614 | INFO     | all workflow threads have been joined
[2026-01-08 04:52:08] 2026-01-08 03:52:02,615 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 04:52:08] 2026-01-08 03:52:02,615 | INFO     | traces error code: 0
[2026-01-08 04:52:08] 2026-01-08 03:52:02,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 04:52:08] 2026-01-08 03:52:03,082 [wrapper] ==== pilot stdout END ====
[2026-01-08 04:52:08] 2026-01-08 03:52:03,146 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 04:52:08] 2026-01-08 03:52:03,262 [wrapper] pilotpid: 20034
[2026-01-08 04:52:08] 2026-01-08 03:52:03,365 [wrapper] Pilot exit status: 0
[2026-01-08 04:52:08] 2026-01-08 03:52:03,486 [wrapper] pandaids: 6962319489
[2026-01-08 04:52:08] 2026-01-08 03:52:04,634 [wrapper] cleanup supervisor_pilot 25651 20035
[2026-01-08 04:52:08] 2026-01-08 03:52:04,737 [wrapper] Test setup, not cleaning
[2026-01-08 04:52:08] 2026-01-08 03:52:04,836 [wrapper] apfmon messages muted
[2026-01-08 04:52:08] 2026-01-08 03:52:04,928 [wrapper] ==== wrapper stdout END ====
[2026-01-08 04:52:08] 2026-01-08 03:52:05,033 [wrapper] ==== wrapper stderr END ====
[2026-01-08 04:52:08]  *** Error codes and diagnostics ***
[2026-01-08 04:52:08]     "exeErrorCode": 0,
[2026-01-08 04:52:08]     "exeErrorDiag": "",
[2026-01-08 04:52:08]     "pilotErrorCode": 0,
[2026-01-08 04:52:08]     "pilotErrorDiag": "",
[2026-01-08 04:52:08]  *** Listing of results directory ***
[2026-01-08 04:52:08] total 443856
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 04:52:08] -rwx------. 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:56 queuedata.json
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc       100 Jan  7 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 04:52:08] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 23:00 run_atlas
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc       105 Jan  7 23:00 job.xml
[2026-01-08 04:52:08] -rw-r--r--. 2 boinc boinc 226466292 Jan  7 23:00 EVNT.47898824._000582.pool.root.1
[2026-01-08 04:52:08] -rw-r--r--. 2 boinc boinc     15847 Jan  7 23:00 start_atlas.sh
[2026-01-08 04:52:08] drwxrwx--x. 2 boinc boinc        68 Jan  7 23:00 shared
[2026-01-08 04:52:08] -rw-r--r--. 2 boinc boinc    592395 Jan  7 23:00 input.tar.gz
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc      6389 Jan  7 23:00 init_data.xml
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc         0 Jan  7 23:00 boinc_lockfile
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc      2519 Jan  7 23:00 pandaJob.out
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc    989785 Jan  7 23:01 agis_schedconf.cvmfs.json
[2026-01-08 04:52:08] drwx------. 5 boinc boinc      4096 Jan  7 23:01 pilot3
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc 217440688 Jan  8 04:47 HITS.47898826._013397.pool.root.1
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc       531 Jan  8 04:47 boinc_task_state.xml
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc      1014 Jan  8 04:48 memory_monitor_summary.json
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc   1516240 Jan  8 04:49 agis_ddmendpoints.agis.ALL.json
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc    537941 Jan  8 04:49 log.47898826._013397.job.log.tgz.1
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc        95 Jan  8 04:50 pilot_heartbeat.json
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc      7776 Jan  8 04:51 heartbeat.json
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc      8192 Jan  8 04:51 boinc_mmap_file
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc        28 Jan  8 04:51 wrapper_checkpoint.txt
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc      4884 Jan  8 04:52 pilotlog.txt
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc   2811482 Jan  8 04:52 log.47898826._013397.job.log.1
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc       357 Jan  8 04:52 output.list
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc       620 Jan  8 04:52 runtime_log
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc   3368960 Jan  8 04:52 result.tar.gz
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc       657 Jan  8 04:52 ZEKKDmxkpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmshiKDmXhrwbm.diag
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc      8817 Jan  8 04:52 runtime_log.err
[2026-01-08 04:52:08] -rw-r--r--. 1 boinc boinc     20742 Jan  8 04:52 stderr.txt
[2026-01-08 04:52:08] HITS file was successfully produced:
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc 217440688 Jan  8 04:47 shared/HITS.pool.root.1
[2026-01-08 04:52:08]  *** Contents of shared directory: ***
[2026-01-08 04:52:08] total 437396
[2026-01-08 04:52:08] -rw-r--r--. 2 boinc boinc 226466292 Jan  7 23:00 ATLAS.root_0
[2026-01-08 04:52:08] -rw-r--r--. 2 boinc boinc     15847 Jan  7 23:00 start_atlas.sh
[2026-01-08 04:52:08] -rw-r--r--. 2 boinc boinc    592395 Jan  7 23:00 input.tar.gz
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc 217440688 Jan  8 04:47 HITS.pool.root.1
[2026-01-08 04:52:08] -rw-------. 1 boinc boinc   3368960 Jan  8 04:52 result.tar.gz
04:52:09 (16302): run_atlas exited; CPU time 81416.706320
04:52:09 (16302): called boinc_finish(0)

</stderr_txt>
]]>

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