Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:56:06 (1115529): wrapper (7.7.26015): starting
10:56:06 (1115529): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 10:56:06] Arguments: --nthreads 4
[2026-01-08 10:56:06] Threads: 4
[2026-01-08 10:56:06] Checking for CVMFS
[2026-01-08 10:56:06] No cvmfs_config command found, will try listing directly
[2026-01-08 10:56:07] CVMFS is ok
[2026-01-08 10:56:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 10:56:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 10:56:07] Further information can be found at the LHC@home message board.
[2026-01-08 10:56:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 10:56:07] Checking for apptainer binary...
[2026-01-08 10:56:07] which: no apptainer in ((null))
[2026-01-08 10:56:07] apptainer is not installed, using version from CVMFS
[2026-01-08 10:56:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 10:56:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-01-08 10:56:07] apptainer works
[2026-01-08 10:56:07] Set ATHENA_PROC_NUMBER=4
[2026-01-08 10:56:07] Set ATHENA_CORE_NUMBER=4
[2026-01-08 10:56:07] Starting ATLAS job with PandaID=6962319435
[2026-01-08 10:56:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:25:56 (1144133): wrapper (7.7.26015): starting
11:25:56 (1144133): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 11:25:56] Arguments: --nthreads 4
[2026-01-08 11:25:56] Threads: 4
[2026-01-08 11:25:56] This job has been restarted, cleaning up previous attempt
[2026-01-08 11:25:56] Checking for CVMFS
[2026-01-08 11:25:56] No cvmfs_config command found, will try listing directly
[2026-01-08 11:25:56] CVMFS is ok
[2026-01-08 11:25:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 11:25:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 11:25:56] Further information can be found at the LHC@home message board.
[2026-01-08 11:25:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 11:25:56] Checking for apptainer binary...
[2026-01-08 11:25:56] which: no apptainer in ((null))
[2026-01-08 11:25:56] apptainer is not installed, using version from CVMFS
[2026-01-08 11:25:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 11:25:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-01-08 11:25:56] apptainer works
[2026-01-08 11:25:56] Set ATHENA_PROC_NUMBER=4
[2026-01-08 11:25:56] Set ATHENA_CORE_NUMBER=4
[2026-01-08 11:25:56] Starting ATLAS job with PandaID=6962319435
[2026-01-08 11:25:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 17:34:12]  *** The last 200 lines of the pilot log: ***
[2026-01-08 17:34:12] 2026-01-08 16:21:27,936 | WARNING  | process 1155083 can no longer be monitored (due to stat problems) - aborting
[2026-01-08 17:34:12] 2026-01-08 16:21:27,936 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6962319435/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 17:34:12] 2026-01-08 16:21:28,357 | INFO     | number of running child processes to parent process 1155083: 1
[2026-01-08 17:34:12] 2026-01-08 16:21:28,357 | INFO     | maximum number of monitored processes: 6
[2026-01-08 17:34:12] 2026-01-08 16:21:28,547 | INFO     | time since job start (21318s) is within the limit (174528.0s)
[2026-01-08 17:34:12] 2026-01-08 16:21:30,552 | INFO     | time since job start (21320s) is within the limit (174528.0s)
[2026-01-08 17:34:12] 2026-01-08 16:21:30,860 | INFO     | monitor loop #1535: job 0:6962319435 is in state 'finished'
[2026-01-08 17:34:12] 2026-01-08 16:21:30,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 17:34:12] 2026-01-08 16:21:31,634 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 17:34:12] 2026-01-08 16:21:31,642 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2294.4569000000006
[2026-01-08 17:34:12] 2026-01-08 16:21:31,652 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6962319435/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 17:34:12] 2026-01-08 16:21:31,652 | INFO     | extracted standard info from prmon json
[2026-01-08 17:34:12] 2026-01-08 16:21:31,653 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 17:34:12] 2026-01-08 16:21:31,653 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 17:34:12] 2026-01-08 16:21:31,653 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 17:34:12] 2026-01-08 16:21:31,653 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 17:34:12] 2026-01-08 16:21:31,661 | INFO     | fitting pss+swap vs Time
[2026-01-08 17:34:12] 2026-01-08 16:21:31,662 | INFO     | sum of square deviations: 13181084350.0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,666 | INFO     | sum of deviations: 23414011433.0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,667 | INFO     | mean x: 1767878612.0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,667 | INFO     | mean y: 2366852.0257879654
[2026-01-08 17:34:12] 2026-01-08 16:21:31,667 | INFO     | intersect: -3137976456.188014
[2026-01-08 17:34:12] 2026-01-08 16:21:31,668 | INFO     | chi2: 1.341357130517454
[2026-01-08 17:34:12] 2026-01-08 16:21:31,669 | INFO     | sum of square deviations: 12622636670.0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,673 | INFO     | sum of deviations: 22695818783.0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,674 | INFO     | mean x: 1767878459.5
[2026-01-08 17:34:12] 2026-01-08 16:21:31,674 | INFO     | mean y: 2366655.895348837
[2026-01-08 17:34:12] 2026-01-08 16:21:31,674 | INFO     | intersect: -3176323359.206005
[2026-01-08 17:34:12] 2026-01-08 16:21:31,675 | INFO     | chi2: 1.341500484955041
[2026-01-08 17:34:12] 2026-01-08 16:21:31,675 | INFO     | current chi2=1.341500484955041 (change=-0.010687268463063105 %)
[2026-01-08 17:34:12] 2026-01-08 16:21:31,675 | INFO     | right removable region: 343
[2026-01-08 17:34:12] 2026-01-08 16:21:31,676 | INFO     | sum of square deviations: 12622636670.0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,680 | INFO     | sum of deviations: -21167582214.500004
[2026-01-08 17:34:12] 2026-01-08 16:21:31,680 | INFO     | mean x: 1767878764.5
[2026-01-08 17:34:12] 2026-01-08 16:21:31,680 | INFO     | mean y: 2378944.148255814
[2026-01-08 17:34:12] 2026-01-08 16:21:31,681 | INFO     | intersect: 2967030472.284369
[2026-01-08 17:34:12] 2026-01-08 16:21:31,681 | INFO     | chi2: 0.04984450613941122
[2026-01-08 17:34:12] 2026-01-08 16:21:31,681 | INFO     | current chi2=0.04984450613941122 (change=96.2840242165647 %)
[2026-01-08 17:34:12] 2026-01-08 16:21:31,682 | INFO     | sum of square deviations: 12080189290.0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,686 | INFO     | sum of deviations: -21294379468.000004
[2026-01-08 17:34:12] 2026-01-08 16:21:31,687 | INFO     | mean x: 1767878917.0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,687 | INFO     | mean y: 2378972.103244838
[2026-01-08 17:34:12] 2026-01-08 16:21:31,687 | INFO     | intersect: 3118711308.322364
[2026-01-08 17:34:12] 2026-01-08 16:21:31,688 | INFO     | chi2: 0.04508873109002908
[2026-01-08 17:34:12] 2026-01-08 16:21:31,688 | INFO     | current chi2=0.04508873109002908 (change=9.54122212803274 %)
[2026-01-08 17:34:12] 2026-01-08 16:21:31,688 | INFO     | left removable region: 20
[2026-01-08 17:34:12] 2026-01-08 16:21:31,689 | INFO     | sum of square deviations: 10449170802.0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,692 | INFO     | sum of deviations: -9887146509.0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,692 | INFO     | mean x: 1767879039.0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,693 | INFO     | mean y: 2375529.1671826625
[2026-01-08 17:34:12] 2026-01-08 16:21:31,693 | INFO     | intersect: 1675166547.7078636
[2026-01-08 17:34:12] 2026-01-08 16:21:31,694 | INFO     | chi2: 0.027590100579982336
[2026-01-08 17:34:12] 2026-01-08 16:21:31,694 | INFO     | current memory leak: -0.95 B/s (using 323 data points, chi2=0.03)
[2026-01-08 17:34:12] 2026-01-08 16:21:31,695 | INFO     | could have reported an average CPU frequency of 2294 MHz (15 samples)
[2026-01-08 17:34:12] 2026-01-08 16:21:31,695 | INFO     | ..............................
[2026-01-08 17:34:12] 2026-01-08 16:21:31,695 | INFO     | . Timing measurements:
[2026-01-08 17:34:12] 2026-01-08 16:21:31,695 | INFO     | . get job = 0 s
[2026-01-08 17:34:12] 2026-01-08 16:21:31,695 | INFO     | . initial setup = 1 s
[2026-01-08 17:34:12] 2026-01-08 16:21:31,696 | INFO     | . payload setup = 6 s
[2026-01-08 17:34:12] 2026-01-08 16:21:31,696 | INFO     | . stage-in = 0 s
[2026-01-08 17:34:12] 2026-01-08 16:21:31,696 | INFO     | . payload execution = 21283 s
[2026-01-08 17:34:12] 2026-01-08 16:21:31,696 | INFO     | . stage-out = 1 s
[2026-01-08 17:34:12] 2026-01-08 16:21:31,696 | INFO     | . log creation = 0 s
[2026-01-08 17:34:12] 2026-01-08 16:21:31,696 | INFO     | ..............................
[2026-01-08 17:34:12] 2026-01-08 16:21:31,824 | INFO     | 
[2026-01-08 17:34:12] 2026-01-08 16:21:31,824 | INFO     | job summary report
[2026-01-08 17:34:12] 2026-01-08 16:21:31,824 | INFO     | --------------------------------------------------
[2026-01-08 17:34:12] 2026-01-08 16:21:31,824 | INFO     | PanDA job id: 6962319435
[2026-01-08 17:34:12] 2026-01-08 16:21:31,825 | INFO     | task id: 47898826
[2026-01-08 17:34:12] 2026-01-08 16:21:31,825 | INFO     | errors: (none)
[2026-01-08 17:34:12] 2026-01-08 16:21:31,825 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 17:34:12] 2026-01-08 16:21:31,825 | INFO     | pilot state: finished 
[2026-01-08 17:34:12] 2026-01-08 16:21:31,825 | INFO     | transexitcode: 0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,825 | INFO     | exeerrorcode: 0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,825 | INFO     | exeerrordiag: 
[2026-01-08 17:34:12] 2026-01-08 16:21:31,826 | INFO     | exitcode: 0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,826 | INFO     | exitmsg: OK
[2026-01-08 17:34:12] 2026-01-08 16:21:31,826 | INFO     | cpuconsumptiontime: 82514 s
[2026-01-08 17:34:12] 2026-01-08 16:21:31,826 | INFO     | nevents: 400
[2026-01-08 17:34:12] 2026-01-08 16:21:31,826 | INFO     | neventsw: 0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,826 | INFO     | pid: 1155083
[2026-01-08 17:34:12] 2026-01-08 16:21:31,826 | INFO     | pgrp: 1155083
[2026-01-08 17:34:12] 2026-01-08 16:21:31,827 | INFO     | corecount: 4
[2026-01-08 17:34:12] 2026-01-08 16:21:31,827 | INFO     | event service: False
[2026-01-08 17:34:12] 2026-01-08 16:21:31,827 | INFO     | sizes: {0: 2283139, 1: 2284006, 2: 2284006, 6: 2284296, 12: 2284324, 21294: 2318073, 21296: 2327093, 21297: 2327149, 21305: 2327343}
[2026-01-08 17:34:12] 2026-01-08 16:21:31,827 | INFO     | --------------------------------------------------
[2026-01-08 17:34:12] 2026-01-08 16:21:31,827 | INFO     | 
[2026-01-08 17:34:12] 2026-01-08 16:21:31,827 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2026-01-08 17:34:12] 2026-01-08 16:21:31,853 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,853 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,854 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,854 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,855 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,855 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,855 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,856 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,856 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,857 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,857 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,857 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 17:34:12] 2026-01-08 16:21:31,857 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,857 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 17:34:12] 2026-01-08 16:21:31,858 | INFO     | job 6962319435 has completed (purged errors)
[2026-01-08 17:34:12] 2026-01-08 16:21:31,858 | INFO     | overall cleanup function is called
[2026-01-08 17:34:12] 2026-01-08 16:21:32,862 | INFO     | --- collectZombieJob: --- 10, [1155083]
[2026-01-08 17:34:12] 2026-01-08 16:21:32,863 | INFO     | zombie collector waiting for pid 1155083
[2026-01-08 17:34:12] 2026-01-08 16:21:32,863 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 17:34:12] 2026-01-08 16:21:32,863 | INFO     | collected zombie processes
[2026-01-08 17:34:12] 2026-01-08 16:21:32,863 | INFO     | will attempt to kill all subprocesses of pid=1155083
[2026-01-08 17:34:12] 2026-01-08 16:21:33,275 | INFO     | process IDs to be killed: [1155083] (in reverse order)
[2026-01-08 17:34:12] 2026-01-08 16:21:33,374 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 17:34:12] 2026-01-08 16:21:33,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 17:34:12] 2026-01-08 16:21:33,385 | INFO     | did not find any defunct processes belonging to 1155083
[2026-01-08 17:34:12] 2026-01-08 16:21:33,395 | INFO     | did not find any defunct processes belonging to 1155083
[2026-01-08 17:34:12] 2026-01-08 16:21:33,396 | INFO     | ready for new job
[2026-01-08 17:34:12] 2026-01-08 16:21:33,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 17:34:12] 2026-01-08 16:21:33,400 | INFO     | ***************************************
[2026-01-08 17:34:12] 2026-01-08 16:21:33,400 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 17:34:12] 2026-01-08 16:21:33,400 | INFO     | ***************************************
[2026-01-08 17:34:12] 2026-01-08 16:21:33,400 | INFO     | 
[2026-01-08 17:34:12] 2026-01-08 16:21:33,403 | INFO     | architecture information:
[2026-01-08 17:34:12] 2026-01-08 16:21:33,404 | INFO     | executing command: cat /etc/os-release
[2026-01-08 17:34:12] 2026-01-08 16:21:33,419 | INFO     | cat /etc/os-release:
[2026-01-08 17:34:12] NAME="CentOS Linux"
[2026-01-08 17:34:12] VERSION="7 (Core)"
[2026-01-08 17:34:12] ID="centos"
[2026-01-08 17:34:12] ID_LIKE="rhel fedora"
[2026-01-08 17:34:12] VERSION_ID="7"
[2026-01-08 17:34:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 17:34:12] ANSI_COLOR="0;31"
[2026-01-08 17:34:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 17:34:12] HOME_URL="https://www.centos.org/"
[2026-01-08 17:34:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 17:34:12] 
[2026-01-08 17:34:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 17:34:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 17:34:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 17:34:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 17:34:12] 
[2026-01-08 17:34:12] 2026-01-08 16:21:33,419 | INFO     | ***************************************
[2026-01-08 17:34:12] 2026-01-08 16:21:33,922 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2026-01-08 17:34:12] 2026-01-08 16:21:33,938 | INFO     | sufficient remaining disk space (1678370668544 B)
[2026-01-08 17:34:12] 2026-01-08 16:21:33,939 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 17:34:12] 2026-01-08 16:21:33,940 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 17:34:12] 2026-01-08 16:21:33,941 | INFO     | update_server=False
[2026-01-08 17:34:12] 2026-01-08 16:21:33,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 17:34:12] 2026-01-08 16:21:33,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 17:34:12] 2026-01-08 16:21:34,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:34:12] 2026-01-08 16:21:34,374 | INFO     | aborting loop
[2026-01-08 17:34:12] 2026-01-08 16:21:34,592 | INFO     | all job control threads have been joined
[2026-01-08 17:34:12] 2026-01-08 16:21:34,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 17:34:12] 2026-01-08 16:21:34,738 | INFO     | all data control threads have been joined
[2026-01-08 17:34:12] 2026-01-08 16:21:34,945 | INFO     | [job] retrieve thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:35,241 | INFO     | [job] validate thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:35,343 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:35,345 | INFO     | all payload control threads have been joined
[2026-01-08 17:34:12] 2026-01-08 16:21:35,379 | INFO     | [job] job monitor thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:35,552 | INFO     | [payload] failed_post thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:35,597 | INFO     | [job] control thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:35,677 | INFO     | [data] copytool_in thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:35,680 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:35,744 | INFO     | [data] control thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:35,760 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:35,946 | INFO     | [data] copytool_out thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:36,351 | INFO     | [payload] control thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:36,378 | INFO     | [payload] validate_post thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:36,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 17:34:12] 2026-01-08 16:21:37,839 | INFO     | [job] queue monitor thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:38,731 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:44,142 | INFO     | job.realtimelogging is not enabled
[2026-01-08 17:34:12] 2026-01-08 16:21:44,685 | INFO     | [monitor] cgroup control has ended
[2026-01-08 17:34:12] 2026-01-08 16:21:45,148 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 17:34:12] 2026-01-08 16:21:45,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22785700030272)>', '<ExcThread(monitor, started 22785264961280)>']
[2026-01-08 17:34:12] 2026-01-08 16:21:50,715 | INFO     | all workflow threads have been joined
[2026-01-08 17:34:12] 2026-01-08 16:21:50,716 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 17:34:12] 2026-01-08 16:21:50,716 | INFO     | traces error code: 0
[2026-01-08 17:34:12] 2026-01-08 16:21:50,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 17:34:12] 2026-01-08 16:22:04,148 | INFO     | PID=1148352 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 17:34:12] 2026-01-08 16:22:04,148 | INFO     | .. there are 2 such processes running
[2026-01-08 17:34:12] 2026-01-08 16:22:04,149 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 17:34:12] 2026-01-08 16:22:04,149 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 17:34:12] 2026-01-08 16:22:04,149 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 17:34:12] 2026-01-08 16:22:04,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 17:34:12] 2026-01-08 16:22:04,149 | INFO     | [monitor] control thread has ended
[2026-01-08 17:34:12] 2026-01-08 16:22:04,302 [wrapper] ==== pilot stdout END ====
[2026-01-08 17:34:12] 2026-01-08 16:22:04,305 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 17:34:12] 2026-01-08 16:22:04,307 [wrapper] pilotpid: 1148352
[2026-01-08 17:34:12] 2026-01-08 16:22:04,310 [wrapper] Pilot exit status: 0
[2026-01-08 17:34:12] 2026-01-08 16:22:04,321 [wrapper] pandaids: 6962319435 6962319435
[2026-01-08 17:34:12] 2026-01-08 16:22:04,390 [wrapper] cleanup supervisor_pilot 1348375 1148353
[2026-01-08 17:34:12] 2026-01-08 16:22:04,393 [wrapper] Test setup, not cleaning
[2026-01-08 17:34:12] 2026-01-08 16:22:04,396 [wrapper] apfmon messages muted
[2026-01-08 17:34:12] 2026-01-08 16:22:04,398 [wrapper] ==== wrapper stdout END ====
[2026-01-08 17:34:12] 2026-01-08 16:22:04,401 [wrapper] ==== wrapper stderr END ====
[2026-01-08 17:34:12]  *** Error codes and diagnostics ***
[2026-01-08 17:34:12]     "exeErrorCode": 0,
[2026-01-08 17:34:12]     "exeErrorDiag": "",
[2026-01-08 17:34:12]     "pilotErrorCode": 0,
[2026-01-08 17:34:12]     "pilotErrorDiag": "",
[2026-01-08 17:34:12]  *** Listing of results directory ***
[2026-01-08 17:34:12] total 657732
[2026-01-08 17:34:12] drwx------ 5 boinc boinc      4096 Dec  3 15:30 pilot3
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 17:34:12] -rwx------ 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc      5112 Jan  7 21:56 queuedata.json
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc       100 Jan  8 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 17:34:12] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 10:56 run_atlas
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc       105 Jan  8 10:56 job.xml
[2026-01-08 17:34:12] -rw-r--r-- 3 boinc boinc 221694896 Jan  8 10:56 EVNT.47898824._000580.pool.root.1
[2026-01-08 17:34:12] -rw-r--r-- 3 boinc boinc 221694896 Jan  8 10:56 ATLAS.root_0
[2026-01-08 17:34:12] -rw-r--r-- 2 boinc boinc     15847 Jan  8 10:56 start_atlas.sh
[2026-01-08 17:34:12] drwxrwx--x 2 boinc boinc      4096 Jan  8 10:56 shared
[2026-01-08 17:34:12] -rw-r--r-- 2 boinc boinc    592396 Jan  8 10:56 input.tar.gz
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc         0 Jan  8 10:56 boinc_lockfile
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc      2518 Jan  8 11:25 pandaJob.out
[2026-01-08 17:34:12] -rw------- 1 boinc boinc    989835 Jan  8 11:26 agis_schedconf.cvmfs.json
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc      6427 Jan  8 11:31 init_data.xml
[2026-01-08 17:34:12] -rw------- 1 boinc boinc 219328586 Jan  8 17:20 HITS.47898826._013343.pool.root.1
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc       528 Jan  8 17:21 boinc_task_state.xml
[2026-01-08 17:34:12] -rw------- 1 boinc boinc        96 Jan  8 17:21 pilot_heartbeat.json
[2026-01-08 17:34:12] -rw------- 1 boinc boinc      1037 Jan  8 17:21 memory_monitor_summary.json
[2026-01-08 17:34:12] -rw------- 1 boinc boinc   1516240 Jan  8 17:21 agis_ddmendpoints.agis.ALL.json
[2026-01-08 17:34:12] -rw------- 1 boinc boinc    488915 Jan  8 17:21 log.47898826._013343.job.log.tgz.1
[2026-01-08 17:34:12] -rw------- 1 boinc boinc      7834 Jan  8 17:21 heartbeat.json
[2026-01-08 17:34:12] -rw------- 1 boinc boinc       822 Jan  8 17:22 pilotlog.txt
[2026-01-08 17:34:12] -rw------- 1 boinc boinc   2957612 Jan  8 17:22 log.47898826._013343.job.log.1
[2026-01-08 17:34:12] -rw------- 1 boinc boinc       357 Jan  8 17:22 output.list
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc       620 Jan  8 17:22 runtime_log
[2026-01-08 17:34:12] -rw------- 1 boinc boinc   3461120 Jan  8 17:22 result.tar.gz
[2026-01-08 17:34:12] -rw------- 1 boinc boinc       791 Jan  8 17:22 yBIODmwkpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmghiKDmt7hdQo.diag
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc      9283 Jan  8 17:22 runtime_log.err
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc        26 Jan  8 17:34 wrapper_checkpoint.txt
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc      8192 Jan  8 17:34 boinc_mmap_file
[2026-01-08 17:34:12] -rw-r--r-- 1 boinc boinc     23054 Jan  8 17:34 stderr.txt
[2026-01-08 17:34:12] HITS file was successfully produced:
[2026-01-08 17:34:12] -rw------- 1 boinc boinc 219328586 Jan  8 17:20 shared/HITS.pool.root.1
[2026-01-08 17:34:12]  *** Contents of shared directory: ***
[2026-01-08 17:34:12] total 434672
[2026-01-08 17:34:12] -rw-r--r-- 3 boinc boinc 221694896 Jan  8 10:56 ATLAS.root_0
[2026-01-08 17:34:12] -rw-r--r-- 2 boinc boinc     15847 Jan  8 10:56 start_atlas.sh
[2026-01-08 17:34:12] -rw-r--r-- 2 boinc boinc    592396 Jan  8 10:56 input.tar.gz
[2026-01-08 17:34:12] -rw------- 1 boinc boinc 219328586 Jan  8 17:20 HITS.pool.root.1
[2026-01-08 17:34:12] -rw------- 1 boinc boinc   3461120 Jan  8 17:22 result.tar.gz
17:34:14 (1144133): run_atlas exited; CPU time 83470.306272
17:34:14 (1144133): called boinc_finish(0)

</stderr_txt>
]]>

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