Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:09:31 (5308): wrapper (7.7.26015): starting
23:09:31 (5308): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 23:09:31] Arguments: --nthreads 8
[2026-01-07 23:09:31] Threads: 8
[2026-01-07 23:09:31] Checking for CVMFS
[2026-01-07 23:09:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 23:09:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 23:09:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 23:09:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 23:09:36] 2.11.2.0 9903 23729 101320 154880 0 11 13627245 25165825 96 130560 0 1908421 99.421 3180392 3085 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-07 23:09:36] CVMFS is ok
[2026-01-07 23:09:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:09:36] Checking for apptainer binary...
[2026-01-07 23:09:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 23:09:36] Running /usr/bin/apptainer --version
[2026-01-07 23:09:36] apptainer version 1.3.2-1.el7
[2026-01-07 23:09:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:11:14] cg-vwn423.simple-grid.lan
[2026-01-07 23:11:14] apptainer works
[2026-01-07 23:11:14] Set ATHENA_PROC_NUMBER=8
[2026-01-07 23:11:14] Set ATHENA_CORE_NUMBER=8
[2026-01-07 23:11:14] Starting ATLAS job with PandaID=6962316394
[2026-01-07 23:11:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 05:30:00]  *** The last 200 lines of the pilot log: ***
[2026-01-08 05:30:00] 2026-01-08 04:29:02,945 | INFO     | time since job start (22312s) is within the limit (174528.0s)
[2026-01-08 05:30:00] 2026-01-08 04:29:03,482 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 05:30:00] 2026-01-08 04:29:03,484 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 05:30:00] 2026-01-08 04:29:03,486 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6962316394/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 05:30:00] 2026-01-08 04:29:03,486 | INFO     | extracted standard info from prmon json
[2026-01-08 05:30:00] 2026-01-08 04:29:03,486 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 05:30:00] 2026-01-08 04:29:03,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 05:30:00] 2026-01-08 04:29:03,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 05:30:00] 2026-01-08 04:29:03,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 05:30:00] 2026-01-08 04:29:03,500 | INFO     | fitting pss+swap vs Time
[2026-01-08 05:30:00] 2026-01-08 04:29:03,501 | INFO     | sum of square deviations: 13872669410.0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,505 | INFO     | sum of deviations: 167234131235.0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,505 | INFO     | mean x: 1767835564.0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,505 | INFO     | mean y: 2459510.2309859153
[2026-01-08 05:30:00] 2026-01-08 04:29:03,506 | INFO     | intersect: -21308683714.934086
[2026-01-08 05:30:00] 2026-01-08 04:29:03,506 | INFO     | chi2: 8.712537081447552
[2026-01-08 05:30:00] 2026-01-08 04:29:03,507 | INFO     | sum of square deviations: 13294714387.5
[2026-01-08 05:30:00] 2026-01-08 04:29:03,511 | INFO     | sum of deviations: 188416534924.5001
[2026-01-08 05:30:00] 2026-01-08 04:29:03,511 | INFO     | mean x: 1767835411.5
[2026-01-08 05:30:00] 2026-01-08 04:29:03,511 | INFO     | mean y: 2465027.98
[2026-01-08 05:30:00] 2026-01-08 04:29:03,511 | INFO     | intersect: -25051809388.387768
[2026-01-08 05:30:00] 2026-01-08 04:29:03,512 | INFO     | chi2: 7.993051825523255
[2026-01-08 05:30:00] 2026-01-08 04:29:03,512 | INFO     | current chi2=7.993051825523255 (change=8.25804526509696 %)
[2026-01-08 05:30:00] 2026-01-08 04:29:03,512 | INFO     | right removable region: 349
[2026-01-08 05:30:00] 2026-01-08 04:29:03,513 | INFO     | sum of square deviations: 13294714387.5
[2026-01-08 05:30:00] 2026-01-08 04:29:03,523 | INFO     | sum of deviations: 39737359319.999985
[2026-01-08 05:30:00] 2026-01-08 04:29:03,524 | INFO     | mean x: 1767835716.5
[2026-01-08 05:30:00] 2026-01-08 04:29:03,524 | INFO     | mean y: 2493140.5428571426
[2026-01-08 05:30:00] 2026-01-08 04:29:03,524 | INFO     | intersect: -5281495746.901012
[2026-01-08 05:30:00] 2026-01-08 04:29:03,524 | INFO     | chi2: 3.6289486406114535
[2026-01-08 05:30:00] 2026-01-08 04:29:03,525 | INFO     | current chi2=3.6289486406114535 (change=58.347969062433904 %)
[2026-01-08 05:30:00] 2026-01-08 04:29:03,525 | INFO     | sum of square deviations: 12733038740.0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,529 | INFO     | sum of deviations: -52325774318.99998
[2026-01-08 05:30:00] 2026-01-08 04:29:03,529 | INFO     | mean x: 1767835869.0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,530 | INFO     | mean y: 2518106.4898550725
[2026-01-08 05:30:00] 2026-01-08 04:29:03,530 | INFO     | intersect: 7267349589.624666
[2026-01-08 05:30:00] 2026-01-08 04:29:03,530 | INFO     | chi2: 1.0741411336786413
[2026-01-08 05:30:00] 2026-01-08 04:29:03,531 | INFO     | current chi2=1.0741411336786413 (change=70.40076231286493 %)
[2026-01-08 05:30:00] 2026-01-08 04:29:03,531 | INFO     | sum of square deviations: 12187409905.0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,535 | INFO     | sum of deviations: -66096055076.500015
[2026-01-08 05:30:00] 2026-01-08 04:29:03,535 | INFO     | mean x: 1767836021.5
[2026-01-08 05:30:00] 2026-01-08 04:29:03,536 | INFO     | mean y: 2521935.8911764706
[2026-01-08 05:30:00] 2026-01-08 04:29:03,536 | INFO     | intersect: 9590037901.473583
[2026-01-08 05:30:00] 2026-01-08 04:29:03,536 | INFO     | chi2: 0.9814708300389184
[2026-01-08 05:30:00] 2026-01-08 04:29:03,536 | INFO     | current chi2=0.9814708300389184 (change=8.627386172462481 %)
[2026-01-08 05:30:00] 2026-01-08 04:29:03,536 | INFO     | left removable region: 30
[2026-01-08 05:30:00] 2026-01-08 04:29:03,537 | INFO     | sum of square deviations: 10065751520.0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,547 | INFO     | sum of deviations: -10610541483.000002
[2026-01-08 05:30:00] 2026-01-08 04:29:03,547 | INFO     | mean x: 1767836296.0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,547 | INFO     | mean y: 2518826.304075235
[2026-01-08 05:30:00] 2026-01-08 04:29:03,547 | INFO     | intersect: 1866035953.3254137
[2026-01-08 05:30:00] 2026-01-08 04:29:03,548 | INFO     | chi2: 0.11016034411785508
[2026-01-08 05:30:00] 2026-01-08 04:29:03,548 | INFO     | current memory leak: -1.05 B/s (using 319 data points, chi2=0.11)
[2026-01-08 05:30:00] 2026-01-08 04:29:03,549 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 05:30:00] 2026-01-08 04:29:03,549 | INFO     | ..............................
[2026-01-08 05:30:00] 2026-01-08 04:29:03,549 | INFO     | . Timing measurements:
[2026-01-08 05:30:00] 2026-01-08 04:29:03,549 | INFO     | . get job = 0 s
[2026-01-08 05:30:00] 2026-01-08 04:29:03,550 | INFO     | . initial setup = 12 s
[2026-01-08 05:30:00] 2026-01-08 04:29:03,550 | INFO     | . payload setup = 151 s
[2026-01-08 05:30:00] 2026-01-08 04:29:03,550 | INFO     | . stage-in = 0 s
[2026-01-08 05:30:00] 2026-01-08 04:29:03,550 | INFO     | . payload execution = 21826 s
[2026-01-08 05:30:00] 2026-01-08 04:29:03,550 | INFO     | . stage-out = 5 s
[2026-01-08 05:30:00] 2026-01-08 04:29:03,550 | INFO     | . log creation = 1 s
[2026-01-08 05:30:00] 2026-01-08 04:29:03,550 | INFO     | ..............................
[2026-01-08 05:30:00] 2026-01-08 04:29:03,748 | INFO     | 
[2026-01-08 05:30:00] 2026-01-08 04:29:03,748 | INFO     | job summary report
[2026-01-08 05:30:00] 2026-01-08 04:29:03,748 | INFO     | --------------------------------------------------
[2026-01-08 05:30:00] 2026-01-08 04:29:03,748 | INFO     | PanDA job id: 6962316394
[2026-01-08 05:30:00] 2026-01-08 04:29:03,748 | INFO     | task id: 47898826
[2026-01-08 05:30:00] 2026-01-08 04:29:03,748 | INFO     | errors: (none)
[2026-01-08 05:30:00] 2026-01-08 04:29:03,749 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 05:30:00] 2026-01-08 04:29:03,749 | INFO     | pilot state: finished 
[2026-01-08 05:30:00] 2026-01-08 04:29:03,749 | INFO     | transexitcode: 0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,749 | INFO     | exeerrorcode: 0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,749 | INFO     | exeerrordiag: 
[2026-01-08 05:30:00] 2026-01-08 04:29:03,749 | INFO     | exitcode: 0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,749 | INFO     | exitmsg: OK
[2026-01-08 05:30:00] 2026-01-08 04:29:03,749 | INFO     | cpuconsumptiontime: 81568 s
[2026-01-08 05:30:00] 2026-01-08 04:29:03,749 | INFO     | nevents: 400
[2026-01-08 05:30:00] 2026-01-08 04:29:03,750 | INFO     | neventsw: 0
[2026-01-08 05:30:00] 2026-01-08 04:29:03,750 | INFO     | pid: 15808
[2026-01-08 05:30:00] 2026-01-08 04:29:03,750 | INFO     | pgrp: 15808
[2026-01-08 05:30:00] 2026-01-08 04:29:03,750 | INFO     | corecount: 8
[2026-01-08 05:30:00] 2026-01-08 04:29:03,750 | INFO     | event service: False
[2026-01-08 05:30:00] 2026-01-08 04:29:03,750 | INFO     | sizes: {0: 2283795, 1: 2283994, 12: 2283994, 22: 2284022, 33: 2284050, 44: 2284106, 55: 2284262, 65: 2284290, 76: 2284318, 87: 2284374, 98: 2284402, 108: 2285000, 
[2026-01-08 05:30:00] 2026-01-08 04:29:03,750 | INFO     | --------------------------------------------------
[2026-01-08 05:30:00] 2026-01-08 04:29:03,750 | INFO     | 
[2026-01-08 05:30:00] 2026-01-08 04:29:03,750 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-08 05:30:00] 2026-01-08 04:29:04,219 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,220 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,220 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,220 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,222 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 05:30:00] 2026-01-08 04:29:04,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,222 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 05:30:00] 2026-01-08 04:29:04,222 | INFO     | job 6962316394 has completed (purged errors)
[2026-01-08 05:30:00] 2026-01-08 04:29:04,222 | INFO     | overall cleanup function is called
[2026-01-08 05:30:00] 2026-01-08 04:29:05,234 | INFO     | --- collectZombieJob: --- 10, [15808]
[2026-01-08 05:30:00] 2026-01-08 04:29:05,234 | INFO     | zombie collector waiting for pid 15808
[2026-01-08 05:30:00] 2026-01-08 04:29:05,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 05:30:00] 2026-01-08 04:29:05,234 | INFO     | collected zombie processes
[2026-01-08 05:30:00] 2026-01-08 04:29:05,234 | INFO     | will attempt to kill all subprocesses of pid=15808
[2026-01-08 05:30:00] 2026-01-08 04:29:05,321 | INFO     | process IDs to be killed: [15808] (in reverse order)
[2026-01-08 05:30:00] 2026-01-08 04:29:06,134 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 05:30:00] 2026-01-08 04:29:06,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 05:30:00] 2026-01-08 04:29:06,137 | INFO     | did not find any defunct processes belonging to 15808
[2026-01-08 05:30:00] 2026-01-08 04:29:06,139 | INFO     | did not find any defunct processes belonging to 15808
[2026-01-08 05:30:00] 2026-01-08 04:29:06,139 | INFO     | ready for new job
[2026-01-08 05:30:00] 2026-01-08 04:29:06,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 05:30:00] 2026-01-08 04:29:06,141 | INFO     | ***************************************
[2026-01-08 05:30:00] 2026-01-08 04:29:06,141 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 05:30:00] 2026-01-08 04:29:06,142 | INFO     | ***************************************
[2026-01-08 05:30:00] 2026-01-08 04:29:06,142 | INFO     | 
[2026-01-08 05:30:00] 2026-01-08 04:29:06,142 | INFO     | pilot is running in a VM
[2026-01-08 05:30:00] 2026-01-08 04:29:06,142 | INFO     | architecture information:
[2026-01-08 05:30:00] 2026-01-08 04:29:06,153 | INFO     | executing command: cat /etc/os-release
[2026-01-08 05:30:00] 2026-01-08 04:29:06,459 | INFO     | cat /etc/os-release:
[2026-01-08 05:30:00] NAME="CentOS Linux"
[2026-01-08 05:30:00] VERSION="7 (Core)"
[2026-01-08 05:30:00] ID="centos"
[2026-01-08 05:30:00] ID_LIKE="rhel fedora"
[2026-01-08 05:30:00] VERSION_ID="7"
[2026-01-08 05:30:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 05:30:00] ANSI_COLOR="0;31"
[2026-01-08 05:30:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 05:30:00] HOME_URL="https://www.centos.org/"
[2026-01-08 05:30:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 05:30:00] 
[2026-01-08 05:30:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 05:30:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 05:30:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 05:30:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 05:30:00] 
[2026-01-08 05:30:00] 2026-01-08 04:29:06,460 | INFO     | ***************************************
[2026-01-08 05:30:00] 2026-01-08 04:29:06,963 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-08 05:30:00] 2026-01-08 04:29:07,140 | INFO     | sufficient remaining disk space (496760782848 B)
[2026-01-08 05:30:00] 2026-01-08 04:29:07,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 05:30:00] 2026-01-08 04:29:07,141 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 05:30:00] 2026-01-08 04:29:07,141 | INFO     | update_server=False
[2026-01-08 05:30:00] 2026-01-08 04:29:07,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 05:30:00] 2026-01-08 04:29:07,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 05:30:00] 2026-01-08 04:29:07,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:30:00] 2026-01-08 04:29:07,147 | INFO     | aborting loop
[2026-01-08 05:30:00] 2026-01-08 04:29:07,825 | INFO     | all data control threads have been joined
[2026-01-08 05:30:00] 2026-01-08 04:29:08,147 | INFO     | [job] retrieve thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:08,153 | INFO     | [job] job monitor thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:08,403 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:08,470 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:08,581 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:08,622 | INFO     | all payload control threads have been joined
[2026-01-08 05:30:00] 2026-01-08 04:29:08,643 | INFO     | all job control threads have been joined
[2026-01-08 05:30:00] 2026-01-08 04:29:08,701 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:08,762 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 05:30:00] 2026-01-08 04:29:08,831 | INFO     | [data] control thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:08,883 | INFO     | [payload] validate_post thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:08,947 | INFO     | [payload] failed_post thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:09,101 | INFO     | [data] copytool_in thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:09,153 | INFO     | [data] copytool_out thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:09,160 | INFO     | [job] validate thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:09,628 | INFO     | [payload] control thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:09,649 | INFO     | [job] control thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:09,768 | INFO     | [job] queue monitor thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:09,972 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 05:30:00] 2026-01-08 04:29:13,981 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 05:30:00] 2026-01-08 04:29:36,074 | INFO     | PID=9350 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 05:30:00] 2026-01-08 04:29:36,075 | INFO     | .. there are 2 such processes running
[2026-01-08 05:30:00] 2026-01-08 04:29:36,075 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 05:30:00] 2026-01-08 04:29:36,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 05:30:00] 2026-01-08 04:29:36,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 05:30:00] 2026-01-08 04:29:48,320 | INFO     | [monitor] cgroup control has ended
[2026-01-08 05:30:00] 2026-01-08 04:29:50,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140537180284736)>', '<ExcThread(monitor, started 140536732169984)>']
[2026-01-08 05:30:00] 2026-01-08 04:29:51,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 05:30:00] 2026-01-08 04:29:51,165 | INFO     | [monitor] control thread has ended
[2026-01-08 05:30:00] 2026-01-08 04:29:55,249 | INFO     | all workflow threads have been joined
[2026-01-08 05:30:00] 2026-01-08 04:29:55,249 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 05:30:00] 2026-01-08 04:29:55,249 | INFO     | traces error code: 0
[2026-01-08 05:30:00] 2026-01-08 04:29:55,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 05:30:00] 2026-01-08 04:29:55,614 [wrapper] ==== pilot stdout END ====
[2026-01-08 05:30:00] 2026-01-08 04:29:55,714 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 05:30:00] 2026-01-08 04:29:55,811 [wrapper] pilotpid: 9350
[2026-01-08 05:30:00] 2026-01-08 04:29:55,920 [wrapper] Pilot exit status: 0
[2026-01-08 05:30:00] 2026-01-08 04:29:56,376 [wrapper] pandaids: 6962316394
[2026-01-08 05:30:00] 2026-01-08 04:29:57,334 [wrapper] cleanup supervisor_pilot 15125 9351
[2026-01-08 05:30:00] 2026-01-08 04:29:57,408 [wrapper] Test setup, not cleaning
[2026-01-08 05:30:00] 2026-01-08 04:29:57,500 [wrapper] apfmon messages muted
[2026-01-08 05:30:00] 2026-01-08 04:29:57,602 [wrapper] ==== wrapper stdout END ====
[2026-01-08 05:30:00] 2026-01-08 04:29:57,743 [wrapper] ==== wrapper stderr END ====
[2026-01-08 05:30:00]  *** Error codes and diagnostics ***
[2026-01-08 05:30:00]     "exeErrorCode": 0,
[2026-01-08 05:30:00]     "exeErrorDiag": "",
[2026-01-08 05:30:00]     "pilotErrorCode": 0,
[2026-01-08 05:30:00]     "pilotErrorDiag": "",
[2026-01-08 05:30:00]  *** Listing of results directory ***
[2026-01-08 05:30:00] total 441204
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 05:30:00] -rwx------. 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:56 queuedata.json
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc       100 Jan  7 23:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 05:30:00] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 23:09 run_atlas
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc       105 Jan  7 23:09 job.xml
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc      6390 Jan  7 23:09 init_data.xml
[2026-01-08 05:30:00] -rw-r--r--. 2 boinc boinc 224470828 Jan  7 23:09 EVNT.47898824._000478.pool.root.1
[2026-01-08 05:30:00] -rw-r--r--. 2 boinc boinc     15847 Jan  7 23:09 start_atlas.sh
[2026-01-08 05:30:00] drwxrwx--x. 2 boinc boinc        68 Jan  7 23:09 shared
[2026-01-08 05:30:00] -rw-r--r--. 2 boinc boinc    592392 Jan  7 23:09 input.tar.gz
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc         0 Jan  7 23:09 boinc_lockfile
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc      2517 Jan  7 23:11 pandaJob.out
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc    989785 Jan  7 23:17 agis_schedconf.cvmfs.json
[2026-01-08 05:30:00] drwx------. 5 boinc boinc      4096 Jan  7 23:17 pilot3
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc 216431713 Jan  8 05:25 HITS.47898826._012242.pool.root.1
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc       531 Jan  8 05:25 boinc_task_state.xml
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc      1017 Jan  8 05:27 memory_monitor_summary.json
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc   1516240 Jan  8 05:27 agis_ddmendpoints.agis.ALL.json
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc    546779 Jan  8 05:27 log.47898826._012242.job.log.tgz.1
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc        95 Jan  8 05:28 pilot_heartbeat.json
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc      7780 Jan  8 05:29 heartbeat.json
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc        28 Jan  8 05:29 wrapper_checkpoint.txt
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc      8192 Jan  8 05:29 boinc_mmap_file
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc      4883 Jan  8 05:29 pilotlog.txt
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc   2951252 Jan  8 05:29 log.47898826._012242.job.log.1
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc       357 Jan  8 05:29 output.list
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc       620 Jan  8 05:30 runtime_log
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc   3512320 Jan  8 05:30 result.tar.gz
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc      8817 Jan  8 05:30 runtime_log.err
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc       657 Jan  8 05:30 NtINDmkkpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEhiKDmNv2Gcm.diag
[2026-01-08 05:30:00] -rw-r--r--. 1 boinc boinc     20773 Jan  8 05:30 stderr.txt
[2026-01-08 05:30:00] HITS file was successfully produced:
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc 216431713 Jan  8 05:25 shared/HITS.pool.root.1
[2026-01-08 05:30:00]  *** Contents of shared directory: ***
[2026-01-08 05:30:00] total 434600
[2026-01-08 05:30:00] -rw-r--r--. 2 boinc boinc 224470828 Jan  7 23:09 ATLAS.root_0
[2026-01-08 05:30:00] -rw-r--r--. 2 boinc boinc     15847 Jan  7 23:09 start_atlas.sh
[2026-01-08 05:30:00] -rw-r--r--. 2 boinc boinc    592392 Jan  7 23:09 input.tar.gz
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc 216431713 Jan  8 05:25 HITS.pool.root.1
[2026-01-08 05:30:00] -rw-------. 1 boinc boinc   3512320 Jan  8 05:30 result.tar.gz
05:30:02 (5308): run_atlas exited; CPU time 81797.084387
05:30:02 (5308): called boinc_finish(0)

</stderr_txt>
]]>

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