Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:28:48 (1433254): wrapper (7.7.26015): starting
14:28:48 (1433254): wrapper: running run_atlas (--nthreads 12)
[2026-01-07 14:28:48] Arguments: --nthreads 12
[2026-01-07 14:28:48] Threads: 12
[2026-01-07 14:28:48] Checking for CVMFS
[2026-01-07 14:28:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 14:28:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 14:28:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 14:28:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 14:28:51] 2.11.5.0 2639569 89427 377476 154882 1 194 43423154 45568000 12473 130560 0 687652181 99.774 447543219 23105 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-07 14:28:51] CVMFS is ok
[2026-01-07 14:28:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 14:28:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 14:28:51] Further information can be found at the LHC@home message board.
[2026-01-07 14:28:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 14:28:51] Checking for apptainer binary...
[2026-01-07 14:28:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 14:28:51] Running /usr/bin/apptainer --version
[2026-01-07 14:28:51] apptainer version 1.4.1-1.el9
[2026-01-07 14:28:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 14:28:52] wns0026.triumf.lcg
[2026-01-07 14:28:52] apptainer works
[2026-01-07 14:28:52] Set ATHENA_PROC_NUMBER=12
[2026-01-07 14:28:52] Set ATHENA_CORE_NUMBER=12
[2026-01-07 14:28:52] Starting ATLAS job with PandaID=6962315503
[2026-01-07 14:28:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-07 14:35:20]  *** The last 200 lines of the pilot log: ***
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | WARNING  | wrong length of table data, x=[1767825105.0], y=[29199.0] (must be same and length>=4)
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | could have reported an average CPU frequency of 2757 MHz (4 samples)
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | ..............................
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . Timing measurements:
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . get job = 0 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . initial setup = 4 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . payload setup = 32 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . stage-in = 0 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . payload execution = 46 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . stage-out = 1 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . log creation = 0 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | ..............................
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962315503/pilotlog.txt
[2026-01-07 14:35:20] 2026-01-07 22:34:45,025 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-07 14:35:20] - Log from pilotlog.txt -
[2026-01-07 14:35:20] 2026-01-07 22:34:44,848 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962315503/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | INFO     | extracted standard info from prmon json
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | WARNING  | wrong length of table data, x=[1767825105.0], y=[29199.0] (must be same and length>=4)
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | could have reported an average CPU frequency of 2757 MHz (4 samples)
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | ..............................
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . Timing measurements:
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . get job = 0 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . initial setup = 4 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . payload setup = 32 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . stage-in = 0 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . payload execution = 46 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . stage-out = 1 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . log creation = 0 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | ..............................
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962315503/pilotlog.txt
[2026-01-07 14:35:20] 2026-01-07 22:34:45,025 | WARNING  | 
[2026-01-07 14:35:20] [begin log extracts]
[2026-01-07 14:35:20] - Log from pilotlog.txt -
[2026-01-07 14:35:20] 2026-01-07 22:34:44,848 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962315503/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | INFO     | extracted standard info from prmon json
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 14:35:20] 2026-01-07 22:34:44,849 | WARNING  | wrong length of table data, x=[1767825105.0], y=[29199.0] (must be same and length>=4)
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | could have reported an average CPU frequency of 2757 MHz (4 samples)
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | ..............................
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . Timing measurements:
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . get job = 0 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . initial setup = 4 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . payload setup = 32 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . stage-in = 0 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . payload execution = 46 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . stage-out = 1 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | . log creation = 0 s
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | ..............................
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 14:35:20] 2026-01-07 22:34:44,850 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962315503/pilotlog.txt
[2026-01-07 14:35:20] [end log extracts]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,025 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-07 14:35:20] 2026-01-07 22:34:45,026 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-07 14:35:20] 2026-01-07 22:34:45,383 | INFO     | 
[2026-01-07 14:35:20] 2026-01-07 22:34:45,383 | INFO     | job summary report
[2026-01-07 14:35:20] 2026-01-07 22:34:45,383 | INFO     | --------------------------------------------------
[2026-01-07 14:35:20] 2026-01-07 22:34:45,383 | INFO     | PanDA job id: 6962315503
[2026-01-07 14:35:20] 2026-01-07 22:34:45,383 | INFO     | task id: 47898826
[2026-01-07 14:35:20] 2026-01-07 22:34:45,383 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-07 14:32:04,446 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-07 14:35:20] 2026-01-07 22:34:45,383 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-07 14:35:20] 2026-01-07 22:34:45,383 | INFO     | pilot state: failed 
[2026-01-07 14:35:20] 2026-01-07 22:34:45,383 | INFO     | transexitcode: 65
[2026-01-07 14:35:20] 2026-01-07 22:34:45,383 | INFO     | exeerrorcode: 65
[2026-01-07 14:35:20] 2026-01-07 22:34:45,383 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | exitcode: 65
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | cpuconsumptiontime: 16 s
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | nevents: 0
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | neventsw: 0
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | pid: 1444310
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | pgrp: 1444310
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | corecount: 12
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | event service: False
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | sizes: {0: 2283794, 1: 2283794, 2: 2284021, 13: 2284021, 24: 2284077, 33: 2284367, 35: 2284551, 83: 2307975, 85: 2312267, 86: 2312295, 235: 2312461}
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | --------------------------------------------------
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | 
[2026-01-07 14:35:20] 2026-01-07 22:34:45,384 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-07 14:35:20] 2026-01-07 22:34:45,417 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,417 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,417 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,417 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,417 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | job 6962315503 has completed (purged errors)
[2026-01-07 14:35:20] 2026-01-07 22:34:45,418 | INFO     | overall cleanup function is called
[2026-01-07 14:35:20] 2026-01-07 22:34:46,425 | INFO     | --- collectZombieJob: --- 10, [1444310]
[2026-01-07 14:35:20] 2026-01-07 22:34:46,425 | INFO     | zombie collector waiting for pid 1444310
[2026-01-07 14:35:20] 2026-01-07 22:34:46,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-07 14:35:20] 2026-01-07 22:34:46,425 | INFO     | collected zombie processes
[2026-01-07 14:35:20] 2026-01-07 22:34:46,425 | INFO     | will attempt to kill all subprocesses of pid=1444310
[2026-01-07 14:35:20] 2026-01-07 22:34:46,968 | INFO     | process IDs to be killed: [1444310] (in reverse order)
[2026-01-07 14:35:20] 2026-01-07 22:34:47,106 | WARNING  | found no corresponding commands to process id(s)
[2026-01-07 14:35:20] 2026-01-07 22:34:47,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-07 14:35:20] 2026-01-07 22:34:47,119 | INFO     | did not find any defunct processes belonging to 1444310
[2026-01-07 14:35:20] 2026-01-07 22:34:47,149 | INFO     | did not find any defunct processes belonging to 1444310
[2026-01-07 14:35:20] 2026-01-07 22:34:47,149 | INFO     | ready for new job
[2026-01-07 14:35:20] 2026-01-07 22:34:47,149 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-07 14:35:20] 2026-01-07 22:34:47,150 | INFO     | ***************************************
[2026-01-07 14:35:20] 2026-01-07 22:34:47,150 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-07 14:35:20] 2026-01-07 22:34:47,151 | INFO     | ***************************************
[2026-01-07 14:35:20] 2026-01-07 22:34:47,151 | INFO     | 
[2026-01-07 14:35:20] 2026-01-07 22:34:47,165 | INFO     | architecture information:
[2026-01-07 14:35:20] 2026-01-07 22:34:47,183 | INFO     | executing command: cat /etc/os-release
[2026-01-07 14:35:20] 2026-01-07 22:34:47,266 | INFO     | cat /etc/os-release:
[2026-01-07 14:35:20] NAME="CentOS Linux"
[2026-01-07 14:35:20] VERSION="7 (Core)"
[2026-01-07 14:35:20] ID="centos"
[2026-01-07 14:35:20] ID_LIKE="rhel fedora"
[2026-01-07 14:35:20] VERSION_ID="7"
[2026-01-07 14:35:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-07 14:35:20] ANSI_COLOR="0;31"
[2026-01-07 14:35:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-07 14:35:20] HOME_URL="https://www.centos.org/"
[2026-01-07 14:35:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-07 14:35:20] 
[2026-01-07 14:35:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-07 14:35:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-07 14:35:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-07 14:35:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-07 14:35:20] 
[2026-01-07 14:35:20] 2026-01-07 22:34:47,266 | INFO     | ***************************************
[2026-01-07 14:35:20] 2026-01-07 22:34:47,770 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-07 14:35:20] 2026-01-07 22:34:47,959 | INFO     | sufficient remaining disk space (1949640425472 B)
[2026-01-07 14:35:20] 2026-01-07 22:34:47,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-07 14:35:20] 2026-01-07 22:34:47,959 | INFO     | current server update state: UPDATING_FINAL
[2026-01-07 14:35:20] 2026-01-07 22:34:47,959 | INFO     | update_server=False
[2026-01-07 14:35:20] 2026-01-07 22:34:47,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-07 14:35:20] 2026-01-07 22:34:47,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-07 14:35:20] 2026-01-07 22:34:47,960 | INFO     | aborting loop
[2026-01-07 14:35:20] 2026-01-07 22:34:48,129 | INFO     | all job control threads have been joined
[2026-01-07 14:35:20] 2026-01-07 22:34:48,591 | INFO     | [monitor] cgroup control has ended
[2026-01-07 14:35:20] 2026-01-07 22:34:48,617 | INFO     | all data control threads have been joined
[2026-01-07 14:35:20] 2026-01-07 22:34:48,965 | INFO     | [job] retrieve thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:48,966 | INFO     | [job] job monitor thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:49,011 | INFO     | [job] validate thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:49,011 | INFO     | [data] copytool_in thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:49,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-07 14:35:20] 2026-01-07 22:34:49,135 | INFO     | [job] control thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:49,257 | INFO     | [payload] failed_post thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:49,261 | INFO     | [payload] execute_payloads thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:49,261 | INFO     | [payload] validate_pre thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:49,270 | INFO     | all payload control threads have been joined
[2026-01-07 14:35:20] 2026-01-07 22:34:49,291 | INFO     | [payload] validate_post thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:49,482 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:49,576 | INFO     | [job] create_data_payload thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:49,623 | INFO     | [data] control thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:50,276 | INFO     | [payload] control thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:50,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-07 14:35:20] 2026-01-07 22:34:50,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-07 14:35:20] 2026-01-07 22:34:51,093 | INFO     | [data] copytool_out thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:51,391 | INFO     | [job] queue monitor thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:54,932 | INFO     | [data] queue_monitor thread has finished
[2026-01-07 14:35:20] 2026-01-07 22:34:55,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139815344633664)>', '<ExcThread(monitor, started 139814640793344)>']
[2026-01-07 14:35:20] 2026-01-07 22:35:00,635 | INFO     | all workflow threads have been joined
[2026-01-07 14:35:20] 2026-01-07 22:35:00,635 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-07 14:35:20] 2026-01-07 22:35:00,635 | INFO     | traces error code: 0
[2026-01-07 14:35:20] 2026-01-07 22:35:00,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-07 14:35:20] 2026-01-07 22:35:18,913 | INFO     | PID=1437127 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-07 14:35:20] 2026-01-07 22:35:18,914 | INFO     | .. there are 35 such processes running
[2026-01-07 14:35:20] 2026-01-07 22:35:18,914 | INFO     | found 0 job(s) in 20 queues
[2026-01-07 14:35:20] 2026-01-07 22:35:18,914 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-07 14:35:20] 2026-01-07 22:35:18,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-07 14:35:20] 2026-01-07 22:35:18,914 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-07 14:35:20] 2026-01-07 22:35:18,915 | CRITICAL | thread 'MainThread' is not alive
[2026-01-07 14:35:20] 2026-01-07 22:35:18,915 | INFO     | [monitor] control thread has ended
[2026-01-07 14:35:20] 2026-01-07 22:35:19,400 [wrapper] ==== pilot stdout END ====
[2026-01-07 14:35:20] 2026-01-07 22:35:19,407 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-07 14:35:20] 2026-01-07 22:35:19,421 [wrapper] pilotpid: 1437127
[2026-01-07 14:35:20] 2026-01-07 22:35:19,500 [wrapper] Pilot exit status: 0
[2026-01-07 14:35:20] 2026-01-07 22:35:19,706 [wrapper] pandaids: 6962315503
[2026-01-07 14:35:20] 2026-01-07 22:35:19,996 [wrapper] cleanup supervisor_pilot 1437133 1437128
[2026-01-07 14:35:20] 2026-01-07 22:35:20,006 [wrapper] Test setup, not cleaning
[2026-01-07 14:35:20] 2026-01-07 22:35:20,023 [wrapper] apfmon messages muted
[2026-01-07 14:35:20] 2026-01-07 22:35:20,034 [wrapper] ==== wrapper stdout END ====
[2026-01-07 14:35:20] 2026-01-07 22:35:20,059 [wrapper] ==== wrapper stderr END ====
[2026-01-07 14:35:20]  *** Error codes and diagnostics ***
[2026-01-07 14:35:20]     "exeErrorCode": 65,
[2026-01-07 14:35:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-07 14:35:20]     "pilotErrorCode": 1305,
[2026-01-07 14:35:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-07 14:35:20]  *** Listing of results directory ***
[2026-01-07 14:35:20] total 224672
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc    579449 Jan  7 12:55 pilot3.tar.gz
[2026-01-07 14:35:20] -rwx------. 1 boinc boinc     36322 Jan  7 12:56 runpilot2-wrapper.sh
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc      5112 Jan  7 12:56 queuedata.json
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc       100 Jan  7 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-07 14:35:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 14:28 run_atlas
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc       105 Jan  7 14:28 job.xml
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc      6594 Jan  7 14:28 init_data.xml
[2026-01-07 14:35:20] -rw-r--r--. 2 boinc boinc 225914758 Jan  7 14:28 EVNT.47898824._000468.pool.root.1
[2026-01-07 14:35:20] -rw-r--r--. 2 boinc boinc     15847 Jan  7 14:28 start_atlas.sh
[2026-01-07 14:35:20] drwxrwx--x. 2 boinc boinc      4096 Jan  7 14:28 shared
[2026-01-07 14:35:20] -rw-r--r--. 2 boinc boinc    592399 Jan  7 14:28 input.tar.gz
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc         0 Jan  7 14:28 boinc_lockfile
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc      2518 Jan  7 14:28 pandaJob.out
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc    989785 Jan  7 14:29 agis_schedconf.cvmfs.json
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc   1516240 Jan  7 14:29 agis_ddmendpoints.agis.ALL.json
[2026-01-07 14:35:20] drwx------. 5 boinc boinc      4096 Jan  7 14:29 pilot3
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc       523 Jan  7 14:32 boinc_task_state.xml
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc       964 Jan  7 14:32 memory_monitor_summary.json
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc     22360 Jan  7 14:32 log.47898826._012008.job.log.tgz.1
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc      8413 Jan  7 14:34 heartbeat.json
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc      8192 Jan  7 14:35 boinc_mmap_file
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc        22 Jan  7 14:35 wrapper_checkpoint.txt
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc       893 Jan  7 14:35 pilotlog.txt
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc        95 Jan  7 14:35 pilot_heartbeat.json
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc     96618 Jan  7 14:35 log.47898826._012008.job.log.1
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc       188 Jan  7 14:35 output.list
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc       620 Jan  7 14:35 runtime_log
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc    143360 Jan  7 14:35 result.tar.gz
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc      8636 Jan  7 14:35 runtime_log.err
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc       644 Jan  7 14:35 HjeLDmkkpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4ZdKDmDxkvvn.diag
[2026-01-07 14:35:20] -rw-r--r--. 1 boinc boinc     21827 Jan  7 14:35 stderr.txt
[2026-01-07 14:35:20] No HITS result produced
[2026-01-07 14:35:20]  *** Contents of shared directory: ***
[2026-01-07 14:35:20] total 221360
[2026-01-07 14:35:20] -rw-r--r--. 2 boinc boinc 225914758 Jan  7 14:28 ATLAS.root_0
[2026-01-07 14:35:20] -rw-r--r--. 2 boinc boinc     15847 Jan  7 14:28 start_atlas.sh
[2026-01-07 14:35:20] -rw-r--r--. 2 boinc boinc    592399 Jan  7 14:28 input.tar.gz
[2026-01-07 14:35:20] -rw-------. 1 boinc boinc    143360 Jan  7 14:35 result.tar.gz
14:35:22 (1433254): run_atlas exited; CPU time 29.485672
14:35:22 (1433254): called boinc_finish(0)

</stderr_txt>
]]>

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