Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:46:01 (15042): wrapper (7.7.26015): starting
02:46:01 (15042): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 02:46:01] Arguments: --nthreads 8
[2026-01-08 02:46:01] Threads: 8
[2026-01-08 02:46:01] Checking for CVMFS
[2026-01-08 02:46:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 02:46:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 02:46:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 02:46:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 02:46:05] 2.11.2.0 18097 33332 125756 154886 2 61 19596428 25165825 96 130560 0 14141090 99.734 12723575 2646 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 02:46:05] CVMFS is ok
[2026-01-08 02:46:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 02:46:05] Checking for apptainer binary...
[2026-01-08 02:46:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 02:46:05] Running /usr/bin/apptainer --version
[2026-01-08 02:46:05] apptainer version 1.3.2-1.el7
[2026-01-08 02:46:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 02:46:27] cg-vwn387.simple-grid.lan
[2026-01-08 02:46:27] apptainer works
[2026-01-08 02:46:27] Set ATHENA_PROC_NUMBER=8
[2026-01-08 02:46:27] Set ATHENA_CORE_NUMBER=8
[2026-01-08 02:46:28] Starting ATLAS job with PandaID=6962315054
[2026-01-08 02:46:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 09:11:42]  *** The last 200 lines of the pilot log: ***
[2026-01-08 09:11:42] 2026-01-08 08:10:38,820 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6962315054/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 09:11:42] 2026-01-08 08:10:38,821 | INFO     | extracted standard info from prmon json
[2026-01-08 09:11:42] 2026-01-08 08:10:38,821 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 09:11:42] 2026-01-08 08:10:38,821 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 09:11:42] 2026-01-08 08:10:38,822 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 09:11:42] 2026-01-08 08:10:38,822 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 09:11:42] 2026-01-08 08:10:38,835 | INFO     | fitting pss+swap vs Time
[2026-01-08 09:11:42] 2026-01-08 08:10:38,836 | INFO     | sum of square deviations: 14831839022.0
[2026-01-08 09:11:42] 2026-01-08 08:10:38,840 | INFO     | sum of deviations: 193090901088.0
[2026-01-08 09:11:42] 2026-01-08 08:10:38,840 | INFO     | mean x: 1767848652.0
[2026-01-08 09:11:42] 2026-01-08 08:10:38,840 | INFO     | mean y: 2449800.774104683
[2026-01-08 09:11:42] 2026-01-08 08:10:38,841 | INFO     | intersect: -23012598346.360924
[2026-01-08 09:11:42] 2026-01-08 08:10:38,841 | INFO     | chi2: 7.091828342980584
[2026-01-08 09:11:42] 2026-01-08 08:10:38,842 | INFO     | sum of square deviations: 14227353269.5
[2026-01-08 09:11:42] 2026-01-08 08:10:38,854 | INFO     | sum of deviations: 214051491850.00003
[2026-01-08 09:11:42] 2026-01-08 08:10:38,855 | INFO     | mean x: 1767848499.5
[2026-01-08 09:11:42] 2026-01-08 08:10:38,855 | INFO     | mean y: 2455021.279329609
[2026-01-08 09:11:42] 2026-01-08 08:10:38,855 | INFO     | intersect: -26594945177.813198
[2026-01-08 09:11:42] 2026-01-08 08:10:38,856 | INFO     | chi2: 6.359685453995755
[2026-01-08 09:11:42] 2026-01-08 08:10:38,856 | INFO     | current chi2=6.359685453995755 (change=10.323753672203537 %)
[2026-01-08 09:11:42] 2026-01-08 08:10:38,856 | INFO     | right removable region: 357
[2026-01-08 09:11:42] 2026-01-08 08:10:38,857 | INFO     | sum of square deviations: 14227353269.5
[2026-01-08 09:11:42] 2026-01-08 08:10:38,861 | INFO     | sum of deviations: 65396933192.0
[2026-01-08 09:11:42] 2026-01-08 08:10:38,861 | INFO     | mean x: 1767848804.5
[2026-01-08 09:11:42] 2026-01-08 08:10:38,861 | INFO     | mean y: 2482001.653631285
[2026-01-08 09:11:42] 2026-01-08 08:10:38,861 | INFO     | intersect: -8123547342.770357
[2026-01-08 09:11:42] 2026-01-08 08:10:38,862 | INFO     | chi2: 2.3316540627573983
[2026-01-08 09:11:42] 2026-01-08 08:10:38,862 | INFO     | current chi2=2.3316540627573983 (change=67.12196136183634 %)
[2026-01-08 09:11:42] 2026-01-08 08:10:38,863 | INFO     | sum of square deviations: 13639518992.0
[2026-01-08 09:11:42] 2026-01-08 08:10:38,867 | INFO     | sum of deviations: -2700691369.0
[2026-01-08 09:11:42] 2026-01-08 08:10:38,867 | INFO     | mean x: 1767848957.0
[2026-01-08 09:11:42] 2026-01-08 08:10:38,867 | INFO     | mean y: 2499609.473087819
[2026-01-08 09:11:42] 2026-01-08 08:10:38,867 | INFO     | intersect: 352542336.2485624
[2026-01-08 09:11:42] 2026-01-08 08:10:38,868 | INFO     | chi2: 0.8220699714386068
[2026-01-08 09:11:42] 2026-01-08 08:10:38,876 | INFO     | current chi2=0.8220699714386068 (change=64.74305581736115 %)
[2026-01-08 09:11:42] 2026-01-08 08:10:38,877 | INFO     | sum of square deviations: 13068103627.0
[2026-01-08 09:11:42] 2026-01-08 08:10:38,881 | INFO     | sum of deviations: -6379910883.000002
[2026-01-08 09:11:42] 2026-01-08 08:10:38,881 | INFO     | mean x: 1767849109.5
[2026-01-08 09:11:42] 2026-01-08 08:10:38,881 | INFO     | mean y: 2500576.1264367816
[2026-01-08 09:11:42] 2026-01-08 08:10:38,882 | INFO     | intersect: 865572992.3795462
[2026-01-08 09:11:42] 2026-01-08 08:10:38,882 | INFO     | chi2: 0.8015386056864359
[2026-01-08 09:11:42] 2026-01-08 08:10:38,882 | INFO     | current chi2=0.8015386056864359 (change=2.4975204624299145 %)
[2026-01-08 09:11:42] 2026-01-08 08:10:38,882 | INFO     | left removable region: 30
[2026-01-08 09:11:42] 2026-01-08 08:10:38,883 | INFO     | sum of square deviations: 10842205148.0
[2026-01-08 09:11:42] 2026-01-08 08:10:38,887 | INFO     | sum of deviations: 12844927318.999996
[2026-01-08 09:11:42] 2026-01-08 08:10:38,887 | INFO     | mean x: 1767849384.0
[2026-01-08 09:11:42] 2026-01-08 08:10:38,887 | INFO     | mean y: 2507811.379204893
[2026-01-08 09:11:42] 2026-01-08 08:10:38,887 | INFO     | intersect: -2091890564.0848224
[2026-01-08 09:11:42] 2026-01-08 08:10:38,888 | INFO     | chi2: 0.0015987528578915195
[2026-01-08 09:11:42] 2026-01-08 08:10:38,888 | INFO     | current memory leak: 1.18 B/s (using 327 data points, chi2=0.00)
[2026-01-08 09:11:42] 2026-01-08 08:10:38,889 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 09:11:42] 2026-01-08 08:10:38,889 | INFO     | ..............................
[2026-01-08 09:11:42] 2026-01-08 08:10:38,889 | INFO     | . Timing measurements:
[2026-01-08 09:11:42] 2026-01-08 08:10:38,889 | INFO     | . get job = 0 s
[2026-01-08 09:11:42] 2026-01-08 08:10:38,889 | INFO     | . initial setup = 11 s
[2026-01-08 09:11:42] 2026-01-08 08:10:38,889 | INFO     | . payload setup = 158 s
[2026-01-08 09:11:42] 2026-01-08 08:10:38,890 | INFO     | . stage-in = 0 s
[2026-01-08 09:11:42] 2026-01-08 08:10:38,890 | INFO     | . payload execution = 22284 s
[2026-01-08 09:11:42] 2026-01-08 08:10:38,890 | INFO     | . stage-out = 5 s
[2026-01-08 09:11:42] 2026-01-08 08:10:38,890 | INFO     | . log creation = 1 s
[2026-01-08 09:11:42] 2026-01-08 08:10:38,890 | INFO     | ..............................
[2026-01-08 09:11:42] 2026-01-08 08:10:39,064 | INFO     | 
[2026-01-08 09:11:42] 2026-01-08 08:10:39,065 | INFO     | job summary report
[2026-01-08 09:11:42] 2026-01-08 08:10:39,065 | INFO     | --------------------------------------------------
[2026-01-08 09:11:42] 2026-01-08 08:10:39,065 | INFO     | PanDA job id: 6962315054
[2026-01-08 09:11:42] 2026-01-08 08:10:39,065 | INFO     | task id: 47898826
[2026-01-08 09:11:42] 2026-01-08 08:10:39,065 | INFO     | errors: (none)
[2026-01-08 09:11:42] 2026-01-08 08:10:39,065 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 09:11:42] 2026-01-08 08:10:39,065 | INFO     | pilot state: finished 
[2026-01-08 09:11:42] 2026-01-08 08:10:39,065 | INFO     | transexitcode: 0
[2026-01-08 09:11:42] 2026-01-08 08:10:39,065 | INFO     | exeerrorcode: 0
[2026-01-08 09:11:42] 2026-01-08 08:10:39,066 | INFO     | exeerrordiag: 
[2026-01-08 09:11:42] 2026-01-08 08:10:39,066 | INFO     | exitcode: 0
[2026-01-08 09:11:42] 2026-01-08 08:10:39,066 | INFO     | exitmsg: OK
[2026-01-08 09:11:42] 2026-01-08 08:10:39,066 | INFO     | cpuconsumptiontime: 84200 s
[2026-01-08 09:11:42] 2026-01-08 08:10:39,066 | INFO     | nevents: 400
[2026-01-08 09:11:42] 2026-01-08 08:10:39,066 | INFO     | neventsw: 0
[2026-01-08 09:11:42] 2026-01-08 08:10:39,066 | INFO     | pid: 25283
[2026-01-08 09:11:42] 2026-01-08 08:10:39,066 | INFO     | pgrp: 25283
[2026-01-08 09:11:42] 2026-01-08 08:10:39,066 | INFO     | corecount: 8
[2026-01-08 09:11:42] 2026-01-08 08:10:39,067 | INFO     | event service: False
[2026-01-08 09:11:42] 2026-01-08 08:10:39,067 | INFO     | sizes: {0: 2283742, 1: 2283997, 12: 2283997, 23: 2284025, 33: 2284053, 44: 2284109, 55: 2284265, 66: 2284293, 76: 2284321, 87: 2284377, 98: 2284405, 109: 2284713, 
[2026-01-08 09:11:42] 2026-01-08 08:10:39,067 | INFO     | --------------------------------------------------
[2026-01-08 09:11:42] 2026-01-08 08:10:39,067 | INFO     | 
[2026-01-08 09:11:42] 2026-01-08 08:10:39,067 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-01-08 09:11:42] 2026-01-08 08:10:39,667 | INFO     | time since job start (22788s) is within the limit (174528.0s)
[2026-01-08 09:11:42] 2026-01-08 08:10:39,721 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,721 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,721 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,721 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,722 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,722 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,723 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,723 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 09:11:42] 2026-01-08 08:10:39,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,723 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 09:11:42] 2026-01-08 08:10:39,723 | INFO     | job 6962315054 has completed (purged errors)
[2026-01-08 09:11:42] 2026-01-08 08:10:39,724 | INFO     | overall cleanup function is called
[2026-01-08 09:11:42] 2026-01-08 08:10:40,732 | INFO     | --- collectZombieJob: --- 10, [25283]
[2026-01-08 09:11:42] 2026-01-08 08:10:40,733 | INFO     | zombie collector waiting for pid 25283
[2026-01-08 09:11:42] 2026-01-08 08:10:40,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 09:11:42] 2026-01-08 08:10:40,733 | INFO     | collected zombie processes
[2026-01-08 09:11:42] 2026-01-08 08:10:40,733 | INFO     | will attempt to kill all subprocesses of pid=25283
[2026-01-08 09:11:42] 2026-01-08 08:10:40,808 | INFO     | process IDs to be killed: [25283] (in reverse order)
[2026-01-08 09:11:42] 2026-01-08 08:10:41,555 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 09:11:42] 2026-01-08 08:10:41,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 09:11:42] 2026-01-08 08:10:41,557 | INFO     | did not find any defunct processes belonging to 25283
[2026-01-08 09:11:42] 2026-01-08 08:10:41,559 | INFO     | did not find any defunct processes belonging to 25283
[2026-01-08 09:11:42] 2026-01-08 08:10:41,559 | INFO     | ready for new job
[2026-01-08 09:11:42] 2026-01-08 08:10:41,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 09:11:42] 2026-01-08 08:10:41,562 | INFO     | ***************************************
[2026-01-08 09:11:42] 2026-01-08 08:10:41,562 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 09:11:42] 2026-01-08 08:10:41,562 | INFO     | ***************************************
[2026-01-08 09:11:42] 2026-01-08 08:10:41,563 | INFO     | 
[2026-01-08 09:11:42] 2026-01-08 08:10:41,571 | INFO     | pilot is running in a VM
[2026-01-08 09:11:42] 2026-01-08 08:10:41,572 | INFO     | architecture information:
[2026-01-08 09:11:42] 2026-01-08 08:10:41,591 | INFO     | executing command: cat /etc/os-release
[2026-01-08 09:11:42] 2026-01-08 08:10:41,913 | INFO     | cat /etc/os-release:
[2026-01-08 09:11:42] NAME="CentOS Linux"
[2026-01-08 09:11:42] VERSION="7 (Core)"
[2026-01-08 09:11:42] ID="centos"
[2026-01-08 09:11:42] ID_LIKE="rhel fedora"
[2026-01-08 09:11:42] VERSION_ID="7"
[2026-01-08 09:11:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 09:11:42] ANSI_COLOR="0;31"
[2026-01-08 09:11:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 09:11:42] HOME_URL="https://www.centos.org/"
[2026-01-08 09:11:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 09:11:42] 
[2026-01-08 09:11:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 09:11:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 09:11:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 09:11:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 09:11:42] 
[2026-01-08 09:11:42] 2026-01-08 08:10:41,913 | INFO     | ***************************************
[2026-01-08 09:11:42] 2026-01-08 08:10:42,416 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-01-08 09:11:42] 2026-01-08 08:10:42,651 | INFO     | sufficient remaining disk space (496282632192 B)
[2026-01-08 09:11:42] 2026-01-08 08:10:42,651 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 09:11:42] 2026-01-08 08:10:42,651 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 09:11:42] 2026-01-08 08:10:42,652 | INFO     | update_server=False
[2026-01-08 09:11:42] 2026-01-08 08:10:42,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 09:11:42] 2026-01-08 08:10:42,705 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 09:11:42] 2026-01-08 08:10:42,706 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 09:11:42] 2026-01-08 08:10:42,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:11:42] 2026-01-08 08:10:42,706 | INFO     | will abort loop
[2026-01-08 09:11:42] 2026-01-08 08:10:42,746 | INFO     | all job control threads have been joined
[2026-01-08 09:11:42] 2026-01-08 08:10:43,070 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 09:11:42] 2026-01-08 08:10:43,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 09:11:42] 2026-01-08 08:10:43,657 | INFO     | [job] retrieve thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:43,695 | INFO     | all data control threads have been joined
[2026-01-08 09:11:42] 2026-01-08 08:10:43,711 | INFO     | [job] job monitor thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:43,752 | INFO     | [job] control thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:43,797 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:43,927 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:44,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:11:42] 2026-01-08 08:10:44,158 | INFO     | all payload control threads have been joined
[2026-01-08 09:11:42] 2026-01-08 08:10:44,696 | INFO     | [job] validate thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:44,701 | INFO     | [data] control thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:44,722 | INFO     | [payload] validate_post thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:44,880 | INFO     | [payload] failed_post thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:45,036 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:45,058 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:45,085 | INFO     | [job] queue monitor thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:45,126 | INFO     | [data] copytool_in thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:45,164 | INFO     | [payload] control thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:45,519 | INFO     | [data] copytool_out thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:10:47,079 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 09:11:42] 2026-01-08 08:11:12,798 | INFO     | PID=18822 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 09:11:42] 2026-01-08 08:11:12,798 | INFO     | .. there are 2 such processes running
[2026-01-08 09:11:42] 2026-01-08 08:11:12,799 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 09:11:42] 2026-01-08 08:11:12,799 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 09:11:42] 2026-01-08 08:11:12,799 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 09:11:42] 2026-01-08 08:11:30,225 | INFO     | [monitor] cgroup control has ended
[2026-01-08 09:11:42] 2026-01-08 08:11:31,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957953685312)>', '<ExcThread(monitor, started 139957507172096)>']
[2026-01-08 09:11:42] 2026-01-08 08:11:31,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 09:11:42] 2026-01-08 08:11:31,912 | INFO     | [monitor] control thread has ended
[2026-01-08 09:11:42] 2026-01-08 08:11:36,657 | INFO     | all workflow threads have been joined
[2026-01-08 09:11:42] 2026-01-08 08:11:36,658 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 09:11:42] 2026-01-08 08:11:36,658 | INFO     | traces error code: 0
[2026-01-08 09:11:42] 2026-01-08 08:11:36,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 09:11:42] 2026-01-08 08:11:37,149 [wrapper] ==== pilot stdout END ====
[2026-01-08 09:11:42] 2026-01-08 08:11:37,252 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 09:11:42] 2026-01-08 08:11:37,333 [wrapper] pilotpid: 18822
[2026-01-08 09:11:42] 2026-01-08 08:11:37,442 [wrapper] Pilot exit status: 0
[2026-01-08 09:11:42] 2026-01-08 08:11:37,908 [wrapper] pandaids: 6962315054
[2026-01-08 09:11:42] 2026-01-08 08:11:39,070 [wrapper] cleanup supervisor_pilot 26950 18823
[2026-01-08 09:11:42] 2026-01-08 08:11:39,141 [wrapper] Test setup, not cleaning
[2026-01-08 09:11:42] 2026-01-08 08:11:39,252 [wrapper] apfmon messages muted
[2026-01-08 09:11:42] 2026-01-08 08:11:39,344 [wrapper] ==== wrapper stdout END ====
[2026-01-08 09:11:42] 2026-01-08 08:11:39,452 [wrapper] ==== wrapper stderr END ====
[2026-01-08 09:11:42]  *** Error codes and diagnostics ***
[2026-01-08 09:11:42]     "exeErrorCode": 0,
[2026-01-08 09:11:42]     "exeErrorDiag": "",
[2026-01-08 09:11:42]     "pilotErrorCode": 0,
[2026-01-08 09:11:42]     "pilotErrorDiag": "",
[2026-01-08 09:11:42]  *** Listing of results directory ***
[2026-01-08 09:11:42] total 450688
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 09:11:42] -rwx------. 1 boinc boinc     36322 Jan  7 21:55 runpilot2-wrapper.sh
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:56 queuedata.json
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc       100 Jan  8 02:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 09:11:42] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 02:46 run_atlas
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc       105 Jan  8 02:46 job.xml
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc      6391 Jan  8 02:46 init_data.xml
[2026-01-08 09:11:42] -rw-r--r--. 2 boinc boinc 225682186 Jan  8 02:46 EVNT.47898824._000455.pool.root.1
[2026-01-08 09:11:42] -rw-r--r--. 2 boinc boinc     15847 Jan  8 02:46 start_atlas.sh
[2026-01-08 09:11:42] drwxrwx--x. 2 boinc boinc        68 Jan  8 02:46 shared
[2026-01-08 09:11:42] -rw-r--r--. 2 boinc boinc    592399 Jan  8 02:46 input.tar.gz
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc         0 Jan  8 02:46 boinc_lockfile
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc      2518 Jan  8 02:46 pandaJob.out
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc    989843 Jan  8 02:50 agis_schedconf.cvmfs.json
[2026-01-08 09:11:42] drwx------. 5 boinc boinc      4096 Jan  8 02:50 pilot3
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc 224723935 Jan  8 09:07 HITS.47898826._011674.pool.root.1
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc       531 Jan  8 09:07 boinc_task_state.xml
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc      1015 Jan  8 09:08 memory_monitor_summary.json
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc   1516240 Jan  8 09:08 agis_ddmendpoints.agis.ALL.json
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc    562605 Jan  8 09:08 log.47898826._011674.job.log.tgz.1
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc        95 Jan  8 09:10 pilot_heartbeat.json
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc      7778 Jan  8 09:10 heartbeat.json
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc      5071 Jan  8 09:11 pilotlog.txt
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc        28 Jan  8 09:11 wrapper_checkpoint.txt
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc      8192 Jan  8 09:11 boinc_mmap_file
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc   3035951 Jan  8 09:11 log.47898826._011674.job.log.1
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc       357 Jan  8 09:11 output.list
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc       620 Jan  8 09:11 runtime_log
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc   3614720 Jan  8 09:11 result.tar.gz
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc      8833 Jan  8 09:11 runtime_log.err
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc       657 Jan  8 09:11 ds6KDmYkpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHfiKDmzXJnym.diag
[2026-01-08 09:11:42] -rw-r--r--. 1 boinc boinc     20792 Jan  8 09:11 stderr.txt
[2026-01-08 09:11:42] HITS file was successfully produced:
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc 224723935 Jan  8 09:07 shared/HITS.pool.root.1
[2026-01-08 09:11:42]  *** Contents of shared directory: ***
[2026-01-08 09:11:42] total 443984
[2026-01-08 09:11:42] -rw-r--r--. 2 boinc boinc 225682186 Jan  8 02:46 ATLAS.root_0
[2026-01-08 09:11:42] -rw-r--r--. 2 boinc boinc     15847 Jan  8 02:46 start_atlas.sh
[2026-01-08 09:11:42] -rw-r--r--. 2 boinc boinc    592399 Jan  8 02:46 input.tar.gz
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc 224723935 Jan  8 09:07 HITS.pool.root.1
[2026-01-08 09:11:42] -rw-------. 1 boinc boinc   3614720 Jan  8 09:11 result.tar.gz
09:11:44 (15042): run_atlas exited; CPU time 84435.898621
09:11:44 (15042): called boinc_finish(0)

</stderr_txt>
]]>

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