Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:48:54 (19753): wrapper (7.7.26015): starting
22:48:54 (19753): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 22:48:55] Arguments: --nthreads 8
[2026-01-07 22:48:55] Threads: 8
[2026-01-07 22:48:55] Checking for CVMFS
[2026-01-07 22:48:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 22:48:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 22:48:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 22:48:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 22:48:59] 2.11.2.0 11565 33095 103196 154880 0 53 22600868 25165824 942 130560 0 7175367 99.683 9692493 3116 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-07 22:48:59] CVMFS is ok
[2026-01-07 22:48:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 22:48:59] Checking for apptainer binary...
[2026-01-07 22:48:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 22:48:59] Running /usr/bin/apptainer --version
[2026-01-07 22:48:59] apptainer version 1.3.2-1.el7
[2026-01-07 22:48:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 22:49:17] cg-vwn374.simple-grid.lan
[2026-01-07 22:49:17] apptainer works
[2026-01-07 22:49:17] Set ATHENA_PROC_NUMBER=8
[2026-01-07 22:49:17] Set ATHENA_CORE_NUMBER=8
[2026-01-07 22:49:17] Starting ATLAS job with PandaID=6962315399
[2026-01-07 22:49:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 04:04:16]  *** The last 200 lines of the pilot log: ***
[2026-01-08 04:04:16] 2026-01-08 03:03:17,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 04:04:16] 2026-01-08 03:03:17,988 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 04:04:16] 2026-01-08 03:03:17,989 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 04:04:16] 2026-01-08 03:03:17,991 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6962315399/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 04:04:16] 2026-01-08 03:03:17,992 | INFO     | extracted standard info from prmon json
[2026-01-08 04:04:16] 2026-01-08 03:03:17,992 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 04:04:16] 2026-01-08 03:03:17,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 04:04:16] 2026-01-08 03:03:17,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 04:04:16] 2026-01-08 03:03:17,993 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 04:04:16] 2026-01-08 03:03:18,000 | INFO     | fitting pss+swap vs Time
[2026-01-08 04:04:16] 2026-01-08 03:03:18,000 | INFO     | sum of square deviations: 7879803557.5
[2026-01-08 04:04:16] 2026-01-08 03:03:18,003 | INFO     | sum of deviations: 32046534769.000004
[2026-01-08 04:04:16] 2026-01-08 03:03:18,003 | INFO     | mean x: 1767832287.5
[2026-01-08 04:04:16] 2026-01-08 03:03:18,003 | INFO     | mean y: 2488243.761904762
[2026-01-08 04:04:16] 2026-01-08 03:03:18,004 | INFO     | intersect: -7187145159.371263
[2026-01-08 04:04:16] 2026-01-08 03:03:18,004 | INFO     | chi2: 2.2310213103936727
[2026-01-08 04:04:16] 2026-01-08 03:03:18,005 | INFO     | sum of square deviations: 7484568240.0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,014 | INFO     | sum of deviations: 50812086891.0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,014 | INFO     | mean x: 1767832135.0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,014 | INFO     | mean y: 2495380.190311419
[2026-01-08 04:04:16] 2026-01-08 03:03:18,014 | INFO     | intersect: -11999164190.799456
[2026-01-08 04:04:16] 2026-01-08 03:03:18,015 | INFO     | chi2: 1.4567027112757855
[2026-01-08 04:04:16] 2026-01-08 03:03:18,015 | INFO     | current chi2=1.4567027112757855 (change=34.706911830495045 %)
[2026-01-08 04:04:16] 2026-01-08 03:03:18,015 | INFO     | sum of square deviations: 7102775035.0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,018 | INFO     | sum of deviations: 49668121164.49999
[2026-01-08 04:04:16] 2026-01-08 03:03:18,019 | INFO     | mean x: 1767831982.5
[2026-01-08 04:04:16] 2026-01-08 03:03:18,019 | INFO     | mean y: 2494923.221830986
[2026-01-08 04:04:16] 2026-01-08 03:03:18,019 | INFO     | intersect: -12359559720.578138
[2026-01-08 04:04:16] 2026-01-08 03:03:18,019 | INFO     | chi2: 1.4571049979771737
[2026-01-08 04:04:16] 2026-01-08 03:03:18,020 | INFO     | current chi2=1.4571049979771737 (change=-0.02761625266941908 %)
[2026-01-08 04:04:16] 2026-01-08 03:03:18,020 | INFO     | right removable region: 283
[2026-01-08 04:04:16] 2026-01-08 03:03:18,020 | INFO     | sum of square deviations: 7484568240.0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,023 | INFO     | sum of deviations: -11930151433.0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,023 | INFO     | mean x: 1767832440.0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,023 | INFO     | mean y: 2505076.197231834
[2026-01-08 04:04:16] 2026-01-08 03:03:18,024 | INFO     | intersect: 2820370855.6359515
[2026-01-08 04:04:16] 2026-01-08 03:03:18,024 | INFO     | chi2: 0.8274013259484935
[2026-01-08 04:04:16] 2026-01-08 03:03:18,024 | INFO     | current chi2=0.8274013259484935 (change=62.91378652037639 %)
[2026-01-08 04:04:16] 2026-01-08 03:03:18,025 | INFO     | sum of square deviations: 7102775035.0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,027 | INFO     | sum of deviations: -7800795503.499998
[2026-01-08 04:04:16] 2026-01-08 03:03:18,028 | INFO     | mean x: 1767832592.5
[2026-01-08 04:04:16] 2026-01-08 03:03:18,028 | INFO     | mean y: 2503403.2570422534
[2026-01-08 04:04:16] 2026-01-08 03:03:18,028 | INFO     | intersect: 1944068562.023857
[2026-01-08 04:04:16] 2026-01-08 03:03:18,028 | INFO     | chi2: 0.8019766227845019
[2026-01-08 04:04:16] 2026-01-08 03:03:18,029 | INFO     | current chi2=0.8019766227845019 (change=3.0728380976240186 %)
[2026-01-08 04:04:16] 2026-01-08 03:03:18,029 | INFO     | left removable region: 20
[2026-01-08 04:04:16] 2026-01-08 03:03:18,029 | INFO     | sum of square deviations: 5640782972.0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,032 | INFO     | sum of deviations: 9390836966.999998
[2026-01-08 04:04:16] 2026-01-08 03:03:18,032 | INFO     | mean x: 1767832562.0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,032 | INFO     | mean y: 2511367.2927756654
[2026-01-08 04:04:16] 2026-01-08 03:03:18,032 | INFO     | intersect: -2940595548.3788447
[2026-01-08 04:04:16] 2026-01-08 03:03:18,033 | INFO     | chi2: 0.000894135985042082
[2026-01-08 04:04:16] 2026-01-08 03:03:18,036 | INFO     | current memory leak: 1.66 B/s (using 263 data points, chi2=0.00)
[2026-01-08 04:04:16] 2026-01-08 03:03:18,037 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-08 04:04:16] 2026-01-08 03:03:18,037 | INFO     | ..............................
[2026-01-08 04:04:16] 2026-01-08 03:03:18,037 | INFO     | . Timing measurements:
[2026-01-08 04:04:16] 2026-01-08 03:03:18,037 | INFO     | . get job = 0 s
[2026-01-08 04:04:16] 2026-01-08 03:03:18,038 | INFO     | . initial setup = 10 s
[2026-01-08 04:04:16] 2026-01-08 03:03:18,038 | INFO     | . payload setup = 133 s
[2026-01-08 04:04:16] 2026-01-08 03:03:18,038 | INFO     | . stage-in = 0 s
[2026-01-08 04:04:16] 2026-01-08 03:03:18,038 | INFO     | . payload execution = 18102 s
[2026-01-08 04:04:16] 2026-01-08 03:03:18,038 | INFO     | . stage-out = 4 s
[2026-01-08 04:04:16] 2026-01-08 03:03:18,038 | INFO     | . log creation = 2 s
[2026-01-08 04:04:16] 2026-01-08 03:03:18,038 | INFO     | ..............................
[2026-01-08 04:04:16] 2026-01-08 03:03:18,158 | INFO     | 
[2026-01-08 04:04:16] 2026-01-08 03:03:18,158 | INFO     | job summary report
[2026-01-08 04:04:16] 2026-01-08 03:03:18,158 | INFO     | --------------------------------------------------
[2026-01-08 04:04:16] 2026-01-08 03:03:18,158 | INFO     | PanDA job id: 6962315399
[2026-01-08 04:04:16] 2026-01-08 03:03:18,159 | INFO     | task id: 47898826
[2026-01-08 04:04:16] 2026-01-08 03:03:18,159 | INFO     | errors: (none)
[2026-01-08 04:04:16] 2026-01-08 03:03:18,159 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 04:04:16] 2026-01-08 03:03:18,159 | INFO     | pilot state: finished 
[2026-01-08 04:04:16] 2026-01-08 03:03:18,159 | INFO     | transexitcode: 0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,159 | INFO     | exeerrorcode: 0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,159 | INFO     | exeerrordiag: 
[2026-01-08 04:04:16] 2026-01-08 03:03:18,159 | INFO     | exitcode: 0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,159 | INFO     | exitmsg: OK
[2026-01-08 04:04:16] 2026-01-08 03:03:18,160 | INFO     | cpuconsumptiontime: 81772 s
[2026-01-08 04:04:16] 2026-01-08 03:03:18,160 | INFO     | nevents: 400
[2026-01-08 04:04:16] 2026-01-08 03:03:18,160 | INFO     | neventsw: 0
[2026-01-08 04:04:16] 2026-01-08 03:03:18,160 | INFO     | pid: 30285
[2026-01-08 04:04:16] 2026-01-08 03:03:18,160 | INFO     | pgrp: 30285
[2026-01-08 04:04:16] 2026-01-08 03:03:18,160 | INFO     | corecount: 8
[2026-01-08 04:04:16] 2026-01-08 03:03:18,160 | INFO     | event service: False
[2026-01-08 04:04:16] 2026-01-08 03:03:18,160 | INFO     | sizes: {0: 2283140, 1: 2283826, 2: 2284025, 13: 2284025, 23: 2284081, 34: 2284109, 45: 2284265, 56: 2284293, 66: 2284321, 77: 2284349, 88: 2284405, 99: 2284713, 10
[2026-01-08 04:04:16] 2026-01-08 03:03:18,160 | INFO     | --------------------------------------------------
[2026-01-08 04:04:16] 2026-01-08 03:03:18,160 | INFO     | 
[2026-01-08 04:04:16] 2026-01-08 03:03:18,161 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-01-08 04:04:16] 2026-01-08 03:03:18,530 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,531 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,531 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,531 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,532 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 04:04:16] 2026-01-08 03:03:18,533 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,533 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 04:04:16] 2026-01-08 03:03:18,533 | INFO     | job 6962315399 has completed (purged errors)
[2026-01-08 04:04:16] 2026-01-08 03:03:18,533 | INFO     | overall cleanup function is called
[2026-01-08 04:04:16] 2026-01-08 03:03:19,542 | INFO     | --- collectZombieJob: --- 10, [30285]
[2026-01-08 04:04:16] 2026-01-08 03:03:19,542 | INFO     | zombie collector waiting for pid 30285
[2026-01-08 04:04:16] 2026-01-08 03:03:19,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 04:04:16] 2026-01-08 03:03:19,542 | INFO     | collected zombie processes
[2026-01-08 04:04:16] 2026-01-08 03:03:19,542 | INFO     | will attempt to kill all subprocesses of pid=30285
[2026-01-08 04:04:16] 2026-01-08 03:03:19,628 | INFO     | process IDs to be killed: [30285] (in reverse order)
[2026-01-08 04:04:16] 2026-01-08 03:03:20,487 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 04:04:16] 2026-01-08 03:03:20,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 04:04:16] 2026-01-08 03:03:20,490 | INFO     | did not find any defunct processes belonging to 30285
[2026-01-08 04:04:16] 2026-01-08 03:03:20,492 | INFO     | did not find any defunct processes belonging to 30285
[2026-01-08 04:04:16] 2026-01-08 03:03:20,492 | INFO     | ready for new job
[2026-01-08 04:04:16] 2026-01-08 03:03:20,492 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 04:04:16] 2026-01-08 03:03:20,495 | INFO     | ***************************************
[2026-01-08 04:04:16] 2026-01-08 03:03:20,495 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 04:04:16] 2026-01-08 03:03:20,495 | INFO     | ***************************************
[2026-01-08 04:04:16] 2026-01-08 03:03:20,495 | INFO     | 
[2026-01-08 04:04:16] 2026-01-08 03:03:20,496 | INFO     | pilot is running in a VM
[2026-01-08 04:04:16] 2026-01-08 03:03:20,496 | INFO     | architecture information:
[2026-01-08 04:04:16] 2026-01-08 03:03:20,515 | INFO     | executing command: cat /etc/os-release
[2026-01-08 04:04:16] 2026-01-08 03:03:20,851 | INFO     | cat /etc/os-release:
[2026-01-08 04:04:16] NAME="CentOS Linux"
[2026-01-08 04:04:16] VERSION="7 (Core)"
[2026-01-08 04:04:16] ID="centos"
[2026-01-08 04:04:16] ID_LIKE="rhel fedora"
[2026-01-08 04:04:16] VERSION_ID="7"
[2026-01-08 04:04:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 04:04:16] ANSI_COLOR="0;31"
[2026-01-08 04:04:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 04:04:16] HOME_URL="https://www.centos.org/"
[2026-01-08 04:04:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 04:04:16] 
[2026-01-08 04:04:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 04:04:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 04:04:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 04:04:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 04:04:16] 
[2026-01-08 04:04:16] 2026-01-08 03:03:20,852 | INFO     | ***************************************
[2026-01-08 04:04:16] 2026-01-08 03:03:21,355 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-01-08 04:04:16] 2026-01-08 03:03:21,612 | INFO     | sufficient remaining disk space (497624809472 B)
[2026-01-08 04:04:16] 2026-01-08 03:03:21,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 04:04:16] 2026-01-08 03:03:21,618 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 04:04:16] 2026-01-08 03:03:21,618 | INFO     | update_server=False
[2026-01-08 04:04:16] 2026-01-08 03:03:21,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 04:04:16] 2026-01-08 03:03:21,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:04:16] 2026-01-08 03:03:21,619 | INFO     | aborting loop
[2026-01-08 04:04:16] 2026-01-08 03:03:21,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 04:04:16] 2026-01-08 03:03:22,015 | INFO     | all job control threads have been joined
[2026-01-08 04:04:16] 2026-01-08 03:03:22,019 | INFO     | all data control threads have been joined
[2026-01-08 04:04:16] 2026-01-08 03:03:22,625 | INFO     | [job] job monitor thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:22,629 | INFO     | [job] retrieve thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:22,800 | INFO     | all payload control threads have been joined
[2026-01-08 04:04:16] 2026-01-08 03:03:22,931 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:22,982 | INFO     | [payload] validate_post thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:23,021 | INFO     | [job] control thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:23,025 | INFO     | [data] control thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:23,176 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:04:16] 2026-01-08 03:03:23,183 | INFO     | [job] validate thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:23,417 | INFO     | [data] copytool_in thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:23,628 | INFO     | [data] copytool_out thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:23,721 | INFO     | [payload] failed_post thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:23,738 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:23,806 | INFO     | [payload] control thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:23,957 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:24,082 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:24,182 | INFO     | [job] queue monitor thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:24,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 04:04:16] 2026-01-08 03:03:28,945 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 04:04:16] 2026-01-08 03:03:49,739 | INFO     | PID=23809 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 04:04:16] 2026-01-08 03:03:49,739 | INFO     | .. there are 2 such processes running
[2026-01-08 04:04:16] 2026-01-08 03:03:49,740 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 04:04:16] 2026-01-08 03:03:49,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 04:04:16] 2026-01-08 03:03:49,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 04:04:16] 2026-01-08 03:04:05,208 | INFO     | [monitor] cgroup control has ended
[2026-01-08 04:04:16] 2026-01-08 03:04:05,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091498530624)>', '<ExcThread(monitor, started 140090617620224)>']
[2026-01-08 04:04:16] 2026-01-08 03:04:05,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 04:04:16] 2026-01-08 03:04:05,836 | INFO     | [monitor] control thread has ended
[2026-01-08 04:04:16] 2026-01-08 03:04:10,730 | INFO     | all workflow threads have been joined
[2026-01-08 04:04:16] 2026-01-08 03:04:10,730 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 04:04:16] 2026-01-08 03:04:10,730 | INFO     | traces error code: 0
[2026-01-08 04:04:16] 2026-01-08 03:04:10,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 04:04:16] 2026-01-08 03:04:11,078 [wrapper] ==== pilot stdout END ====
[2026-01-08 04:04:16] 2026-01-08 03:04:11,191 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 04:04:16] 2026-01-08 03:04:11,289 [wrapper] pilotpid: 23809
[2026-01-08 04:04:16] 2026-01-08 03:04:11,387 [wrapper] Pilot exit status: 0
[2026-01-08 04:04:16] 2026-01-08 03:04:11,873 [wrapper] pandaids: 6962315399
[2026-01-08 04:04:16] 2026-01-08 03:04:12,967 [wrapper] cleanup supervisor_pilot  6030 23810
[2026-01-08 04:04:16] 2026-01-08 03:04:13,087 [wrapper] Test setup, not cleaning
[2026-01-08 04:04:16] 2026-01-08 03:04:13,200 [wrapper] apfmon messages muted
[2026-01-08 04:04:16] 2026-01-08 03:04:13,284 [wrapper] ==== wrapper stdout END ====
[2026-01-08 04:04:16] 2026-01-08 03:04:13,352 [wrapper] ==== wrapper stderr END ====
[2026-01-08 04:04:16]  *** Error codes and diagnostics ***
[2026-01-08 04:04:16]     "exeErrorCode": 0,
[2026-01-08 04:04:16]     "exeErrorDiag": "",
[2026-01-08 04:04:16]     "pilotErrorCode": 0,
[2026-01-08 04:04:16]     "pilotErrorDiag": "",
[2026-01-08 04:04:16]  *** Listing of results directory ***
[2026-01-08 04:04:16] total 446492
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 04:04:16] -rwx------. 1 boinc boinc     36322 Jan  7 21:56 runpilot2-wrapper.sh
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:56 queuedata.json
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc       100 Jan  7 22:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 04:04:16] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 22:48 run_atlas
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc       105 Jan  7 22:48 job.xml
[2026-01-08 04:04:16] -rw-r--r--. 2 boinc boinc 223221810 Jan  7 22:48 EVNT.47898824._000464.pool.root.1
[2026-01-08 04:04:16] -rw-r--r--. 2 boinc boinc    592394 Jan  7 22:48 input.tar.gz
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc      6391 Jan  7 22:48 init_data.xml
[2026-01-08 04:04:16] -rw-r--r--. 2 boinc boinc     15847 Jan  7 22:48 start_atlas.sh
[2026-01-08 04:04:16] drwxrwx--x. 2 boinc boinc        68 Jan  7 22:48 shared
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc         0 Jan  7 22:48 boinc_lockfile
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc      2518 Jan  7 22:49 pandaJob.out
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc    989785 Jan  7 22:53 agis_schedconf.cvmfs.json
[2026-01-08 04:04:16] drwx------. 5 boinc boinc      4096 Jan  7 22:53 pilot3
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc 224103080 Jan  8 03:59 HITS.47898826._011904.pool.root.1
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc       531 Jan  8 04:00 boinc_task_state.xml
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc      1021 Jan  8 04:01 memory_monitor_summary.json
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc   1516240 Jan  8 04:01 agis_ddmendpoints.agis.ALL.json
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc    511581 Jan  8 04:01 log.47898826._011904.job.log.tgz.1
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc      7783 Jan  8 04:03 heartbeat.json
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc        95 Jan  8 04:03 pilot_heartbeat.json
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc        28 Jan  8 04:04 wrapper_checkpoint.txt
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc      8192 Jan  8 04:04 boinc_mmap_file
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc      4885 Jan  8 04:04 pilotlog.txt
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc   2484253 Jan  8 04:04 log.47898826._011904.job.log.1
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc       357 Jan  8 04:04 output.list
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc       620 Jan  8 04:04 runtime_log
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc   3010560 Jan  8 04:04 result.tar.gz
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc       657 Jan  8 04:04 SoIKDmkkpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5YdKDmXxyn1n.diag
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc      8833 Jan  8 04:04 runtime_log.err
[2026-01-08 04:04:16] -rw-r--r--. 1 boinc boinc     20802 Jan  8 04:04 stderr.txt
[2026-01-08 04:04:16] HITS file was successfully produced:
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc 224103080 Jan  8 03:59 shared/HITS.pool.root.1
[2026-01-08 04:04:16]  *** Contents of shared directory: ***
[2026-01-08 04:04:16] total 440380
[2026-01-08 04:04:16] -rw-r--r--. 2 boinc boinc 223221810 Jan  7 22:48 ATLAS.root_0
[2026-01-08 04:04:16] -rw-r--r--. 2 boinc boinc    592394 Jan  7 22:48 input.tar.gz
[2026-01-08 04:04:16] -rw-r--r--. 2 boinc boinc     15847 Jan  7 22:48 start_atlas.sh
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc 224103080 Jan  8 03:59 HITS.pool.root.1
[2026-01-08 04:04:16] -rw-------. 1 boinc boinc   3010560 Jan  8 04:04 result.tar.gz
04:04:18 (19753): run_atlas exited; CPU time 81961.002758
04:04:18 (19753): called boinc_finish(0)

</stderr_txt>
]]>

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