Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:58:17 (3103): wrapper (7.7.26015): starting
04:58:17 (3103): wrapper: running run_atlas (--nthreads 8)
[2026-01-08 04:58:17] Arguments: --nthreads 8
[2026-01-08 04:58:17] Threads: 8
[2026-01-08 04:58:17] Checking for CVMFS
[2026-01-08 04:58:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 04:58:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 04:58:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 04:58:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 04:58:20] 2.11.2.0 26786 33464 98240 154889 0 60 18261295 25165824 96 130560 0 14239400 99.827 9453522 3409 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-08 04:58:20] CVMFS is ok
[2026-01-08 04:58:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 04:58:20] Checking for apptainer binary...
[2026-01-08 04:58:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 04:58:20] Running /usr/bin/apptainer --version
[2026-01-08 04:58:20] apptainer version 1.3.2-1.el7
[2026-01-08 04:58:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 04:58:35] cg-vwn410.simple-grid.lan
[2026-01-08 04:58:35] apptainer works
[2026-01-08 04:58:35] Set ATHENA_PROC_NUMBER=8
[2026-01-08 04:58:35] Set ATHENA_CORE_NUMBER=8
[2026-01-08 04:58:35] Starting ATLAS job with PandaID=6962316296
[2026-01-08 04:58:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 11:10:51]  *** The last 200 lines of the pilot log: ***
[2026-01-08 11:10:51] 2026-01-08 10:09:42,887 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 11:10:51] 2026-01-08 10:09:42,888 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 11:10:51] 2026-01-08 10:09:42,890 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6962316296/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 11:10:51] 2026-01-08 10:09:42,891 | INFO     | extracted standard info from prmon json
[2026-01-08 11:10:51] 2026-01-08 10:09:42,891 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 11:10:51] 2026-01-08 10:09:42,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 11:10:51] 2026-01-08 10:09:42,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 11:10:51] 2026-01-08 10:09:42,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 11:10:51] 2026-01-08 10:09:42,900 | INFO     | fitting pss+swap vs Time
[2026-01-08 11:10:51] 2026-01-08 10:09:42,901 | INFO     | sum of square deviations: 13294714387.5
[2026-01-08 11:10:51] 2026-01-08 10:09:42,905 | INFO     | sum of deviations: 103255837466.99997
[2026-01-08 11:10:51] 2026-01-08 10:09:42,905 | INFO     | mean x: 1767856173.5
[2026-01-08 11:10:51] 2026-01-08 10:09:42,905 | INFO     | mean y: 2474854.1028571427
[2026-01-08 11:10:51] 2026-01-08 10:09:42,905 | INFO     | intersect: -13727904332.348732
[2026-01-08 11:10:51] 2026-01-08 10:09:42,906 | INFO     | chi2: 8.120832315223643
[2026-01-08 11:10:51] 2026-01-08 10:09:42,907 | INFO     | sum of square deviations: 12733038740.0
[2026-01-08 11:10:51] 2026-01-08 10:09:42,911 | INFO     | sum of deviations: 125038315023.00002
[2026-01-08 11:10:51] 2026-01-08 10:09:42,911 | INFO     | mean x: 1767856021.0
[2026-01-08 11:10:51] 2026-01-08 10:09:42,911 | INFO     | mean y: 2480695.098550725
[2026-01-08 11:10:51] 2026-01-08 10:09:42,911 | INFO     | intersect: -17357848020.04878
[2026-01-08 11:10:51] 2026-01-08 10:09:42,912 | INFO     | chi2: 7.404383711764001
[2026-01-08 11:10:51] 2026-01-08 10:09:42,912 | INFO     | current chi2=7.404383711764001 (change=8.82235435543421 %)
[2026-01-08 11:10:51] 2026-01-08 10:09:42,912 | INFO     | right removable region: 344
[2026-01-08 11:10:51] 2026-01-08 10:09:42,913 | INFO     | sum of square deviations: 12733038740.0
[2026-01-08 11:10:51] 2026-01-08 10:09:42,917 | INFO     | sum of deviations: -22098740230.00004
[2026-01-08 11:10:51] 2026-01-08 10:09:42,917 | INFO     | mean x: 1767856326.0
[2026-01-08 11:10:51] 2026-01-08 10:09:42,917 | INFO     | mean y: 2508876.7652173913
[2026-01-08 11:10:51] 2026-01-08 10:09:42,917 | INFO     | intersect: 3070700100.3973746
[2026-01-08 11:10:51] 2026-01-08 10:09:42,918 | INFO     | chi2: 3.151673418759271
[2026-01-08 11:10:51] 2026-01-08 10:09:42,918 | INFO     | current chi2=3.151673418759271 (change=61.19026601680944 %)
[2026-01-08 11:10:51] 2026-01-08 10:09:42,918 | INFO     | sum of square deviations: 12187409905.0
[2026-01-08 11:10:51] 2026-01-08 10:09:42,922 | INFO     | sum of deviations: -99836349273.49997
[2026-01-08 11:10:51] 2026-01-08 10:09:42,922 | INFO     | mean x: 1767856478.5
[2026-01-08 11:10:51] 2026-01-08 10:09:42,923 | INFO     | mean y: 2530546.6735294117
[2026-01-08 11:10:51] 2026-01-08 10:09:42,923 | INFO     | intersect: 14484388318.64659
[2026-01-08 11:10:51] 2026-01-08 10:09:42,923 | INFO     | chi2: 1.1032707786857712
[2026-01-08 11:10:51] 2026-01-08 10:09:42,924 | INFO     | current chi2=1.1032707786857712 (change=64.99412749687437 %)
[2026-01-08 11:10:51] 2026-01-08 10:09:42,924 | INFO     | sum of square deviations: 11657595320.0
[2026-01-08 11:10:51] 2026-01-08 10:09:42,928 | INFO     | sum of deviations: -109415422327.99997
[2026-01-08 11:10:51] 2026-01-08 10:09:42,928 | INFO     | mean x: 1767856631.0
[2026-01-08 11:10:51] 2026-01-08 10:09:42,928 | INFO     | mean y: 2533292.934328358
[2026-01-08 11:10:51] 2026-01-08 10:09:42,928 | INFO     | intersect: 16595215967.753769
[2026-01-08 11:10:51] 2026-01-08 10:09:42,929 | INFO     | chi2: 1.0431509501426606
[2026-01-08 11:10:51] 2026-01-08 10:09:42,929 | INFO     | current chi2=1.0431509501426606 (change=5.449236008473462 %)
[2026-01-08 11:10:51] 2026-01-08 10:09:42,929 | INFO     | left removable region: 30
[2026-01-08 11:10:51] 2026-01-08 10:09:42,930 | INFO     | sum of square deviations: 9599817202.5
[2026-01-08 11:10:51] 2026-01-08 10:09:42,933 | INFO     | sum of deviations: -57204130613.0
[2026-01-08 11:10:51] 2026-01-08 10:09:42,933 | INFO     | mean x: 1767856905.5
[2026-01-08 11:10:51] 2026-01-08 10:09:42,933 | INFO     | mean y: 2531411.898089172
[2026-01-08 11:10:51] 2026-01-08 10:09:42,934 | INFO     | intersect: 10536973390.749508
[2026-01-08 11:10:51] 2026-01-08 10:09:42,934 | INFO     | chi2: 0.22625138226272848
[2026-01-08 11:10:51] 2026-01-08 10:09:42,934 | INFO     | current memory leak: -5.96 B/s (using 314 data points, chi2=0.23)
[2026-01-08 11:10:51] 2026-01-08 10:09:42,935 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 11:10:51] 2026-01-08 10:09:42,935 | INFO     | ..............................
[2026-01-08 11:10:51] 2026-01-08 10:09:42,935 | INFO     | . Timing measurements:
[2026-01-08 11:10:51] 2026-01-08 10:09:42,936 | INFO     | . get job = 0 s
[2026-01-08 11:10:51] 2026-01-08 10:09:42,936 | INFO     | . initial setup = 12 s
[2026-01-08 11:10:51] 2026-01-08 10:09:42,936 | INFO     | . payload setup = 156 s
[2026-01-08 11:10:51] 2026-01-08 10:09:42,936 | INFO     | . stage-in = 0 s
[2026-01-08 11:10:51] 2026-01-08 10:09:42,936 | INFO     | . payload execution = 21510 s
[2026-01-08 11:10:51] 2026-01-08 10:09:42,936 | INFO     | . stage-out = 6 s
[2026-01-08 11:10:51] 2026-01-08 10:09:42,936 | INFO     | . log creation = 2 s
[2026-01-08 11:10:51] 2026-01-08 10:09:42,936 | INFO     | ..............................
[2026-01-08 11:10:51] 2026-01-08 10:09:43,091 | INFO     | 
[2026-01-08 11:10:51] 2026-01-08 10:09:43,091 | INFO     | job summary report
[2026-01-08 11:10:51] 2026-01-08 10:09:43,091 | INFO     | --------------------------------------------------
[2026-01-08 11:10:51] 2026-01-08 10:09:43,092 | INFO     | PanDA job id: 6962316296
[2026-01-08 11:10:51] 2026-01-08 10:09:43,092 | INFO     | task id: 47898826
[2026-01-08 11:10:51] 2026-01-08 10:09:43,092 | INFO     | errors: (none)
[2026-01-08 11:10:51] 2026-01-08 10:09:43,092 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 11:10:51] 2026-01-08 10:09:43,092 | INFO     | pilot state: finished 
[2026-01-08 11:10:51] 2026-01-08 10:09:43,092 | INFO     | transexitcode: 0
[2026-01-08 11:10:51] 2026-01-08 10:09:43,092 | INFO     | exeerrorcode: 0
[2026-01-08 11:10:51] 2026-01-08 10:09:43,092 | INFO     | exeerrordiag: 
[2026-01-08 11:10:51] 2026-01-08 10:09:43,092 | INFO     | exitcode: 0
[2026-01-08 11:10:51] 2026-01-08 10:09:43,092 | INFO     | exitmsg: OK
[2026-01-08 11:10:51] 2026-01-08 10:09:43,093 | INFO     | cpuconsumptiontime: 81180 s
[2026-01-08 11:10:51] 2026-01-08 10:09:43,093 | INFO     | nevents: 400
[2026-01-08 11:10:51] 2026-01-08 10:09:43,093 | INFO     | neventsw: 0
[2026-01-08 11:10:51] 2026-01-08 10:09:43,093 | INFO     | pid: 13325
[2026-01-08 11:10:51] 2026-01-08 10:09:43,093 | INFO     | pgrp: 13325
[2026-01-08 11:10:51] 2026-01-08 10:09:43,093 | INFO     | corecount: 8
[2026-01-08 11:10:51] 2026-01-08 10:09:43,093 | INFO     | event service: False
[2026-01-08 11:10:51] 2026-01-08 10:09:43,093 | INFO     | sizes: {0: 2283741, 1: 2283996, 12: 2283996, 23: 2284024, 34: 2284052, 44: 2284080, 55: 2284236, 66: 2284264, 76: 2284292, 87: 2284348, 98: 2284376, 107: 2284946, 
[2026-01-08 11:10:51] 2026-01-08 10:09:43,093 | INFO     | --------------------------------------------------
[2026-01-08 11:10:51] 2026-01-08 10:09:43,094 | INFO     | 
[2026-01-08 11:10:51] 2026-01-08 10:09:43,094 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-08 11:10:51] 2026-01-08 10:09:43,670 | INFO     | time since job start (22001s) is within the limit (174528.0s)
[2026-01-08 11:10:51] 2026-01-08 10:09:43,733 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,734 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,734 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,734 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,734 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,734 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,734 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,734 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,734 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,735 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 11:10:51] 2026-01-08 10:09:43,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,736 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 11:10:51] 2026-01-08 10:09:43,736 | INFO     | job 6962316296 has completed (purged errors)
[2026-01-08 11:10:51] 2026-01-08 10:09:43,736 | INFO     | overall cleanup function is called
[2026-01-08 11:10:51] 2026-01-08 10:09:44,745 | INFO     | --- collectZombieJob: --- 10, [13325]
[2026-01-08 11:10:51] 2026-01-08 10:09:44,745 | INFO     | zombie collector waiting for pid 13325
[2026-01-08 11:10:51] 2026-01-08 10:09:44,745 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 11:10:51] 2026-01-08 10:09:44,746 | INFO     | collected zombie processes
[2026-01-08 11:10:51] 2026-01-08 10:09:44,746 | INFO     | will attempt to kill all subprocesses of pid=13325
[2026-01-08 11:10:51] 2026-01-08 10:09:44,833 | INFO     | process IDs to be killed: [13325] (in reverse order)
[2026-01-08 11:10:51] 2026-01-08 10:09:45,628 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 11:10:51] 2026-01-08 10:09:45,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 11:10:51] 2026-01-08 10:09:45,630 | INFO     | did not find any defunct processes belonging to 13325
[2026-01-08 11:10:51] 2026-01-08 10:09:45,632 | INFO     | did not find any defunct processes belonging to 13325
[2026-01-08 11:10:51] 2026-01-08 10:09:45,632 | INFO     | ready for new job
[2026-01-08 11:10:51] 2026-01-08 10:09:45,632 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 11:10:51] 2026-01-08 10:09:45,635 | INFO     | ***************************************
[2026-01-08 11:10:51] 2026-01-08 10:09:45,640 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 11:10:51] 2026-01-08 10:09:45,640 | INFO     | ***************************************
[2026-01-08 11:10:51] 2026-01-08 10:09:45,640 | INFO     | 
[2026-01-08 11:10:51] 2026-01-08 10:09:45,646 | INFO     | pilot is running in a VM
[2026-01-08 11:10:51] 2026-01-08 10:09:45,646 | INFO     | architecture information:
[2026-01-08 11:10:51] 2026-01-08 10:09:45,660 | INFO     | executing command: cat /etc/os-release
[2026-01-08 11:10:51] 2026-01-08 10:09:46,000 | INFO     | cat /etc/os-release:
[2026-01-08 11:10:51] NAME="CentOS Linux"
[2026-01-08 11:10:51] VERSION="7 (Core)"
[2026-01-08 11:10:51] ID="centos"
[2026-01-08 11:10:51] ID_LIKE="rhel fedora"
[2026-01-08 11:10:51] VERSION_ID="7"
[2026-01-08 11:10:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 11:10:51] ANSI_COLOR="0;31"
[2026-01-08 11:10:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 11:10:51] HOME_URL="https://www.centos.org/"
[2026-01-08 11:10:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 11:10:51] 
[2026-01-08 11:10:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 11:10:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 11:10:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 11:10:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 11:10:51] 
[2026-01-08 11:10:51] 2026-01-08 10:09:46,001 | INFO     | ***************************************
[2026-01-08 11:10:51] 2026-01-08 10:09:46,504 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-08 11:10:51] 2026-01-08 10:09:46,843 | INFO     | sufficient remaining disk space (496390635520 B)
[2026-01-08 11:10:51] 2026-01-08 10:09:46,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 11:10:51] 2026-01-08 10:09:46,843 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 11:10:51] 2026-01-08 10:09:46,844 | INFO     | update_server=False
[2026-01-08 11:10:51] 2026-01-08 10:09:46,844 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 11:10:51] 2026-01-08 10:09:46,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 11:10:51] 2026-01-08 10:09:46,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:10:51] 2026-01-08 10:09:46,998 | INFO     | aborting loop
[2026-01-08 11:10:51] 2026-01-08 10:09:47,011 | INFO     | all data control threads have been joined
[2026-01-08 11:10:51] 2026-01-08 10:09:47,853 | INFO     | [job] retrieve thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:47,884 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:47,959 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:48,004 | INFO     | [job] job monitor thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:48,017 | INFO     | [data] control thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:48,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 11:10:51] 2026-01-08 10:09:48,211 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:48,335 | INFO     | all payload control threads have been joined
[2026-01-08 11:10:51] 2026-01-08 10:09:48,356 | INFO     | [data] copytool_in thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:48,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 11:10:51] 2026-01-08 10:09:48,473 | INFO     | all job control threads have been joined
[2026-01-08 11:10:51] 2026-01-08 10:09:48,564 | INFO     | [payload] validate_post thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:48,820 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:48,856 | INFO     | [data] copytool_out thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:48,871 | INFO     | [payload] failed_post thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:49,107 | INFO     | [job] queue monitor thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:49,247 | INFO     | [job] validate thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:49,341 | INFO     | [payload] control thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:49,479 | INFO     | [job] control thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:09:52,427 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 11:10:51] 2026-01-08 10:10:16,830 | INFO     | PID=6865 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 11:10:51] 2026-01-08 10:10:16,830 | INFO     | .. there are 2 such processes running
[2026-01-08 11:10:51] 2026-01-08 10:10:16,830 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 11:10:51] 2026-01-08 10:10:16,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 11:10:51] 2026-01-08 10:10:16,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 11:10:51] 2026-01-08 10:10:39,342 | INFO     | [monitor] cgroup control has ended
[2026-01-08 11:10:51] 2026-01-08 10:10:39,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716754949952)>', '<ExcThread(monitor, started 140716298704640)>']
[2026-01-08 11:10:51] 2026-01-08 10:10:39,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 11:10:51] 2026-01-08 10:10:39,967 | INFO     | [monitor] control thread has ended
[2026-01-08 11:10:51] 2026-01-08 10:10:44,942 | INFO     | all workflow threads have been joined
[2026-01-08 11:10:51] 2026-01-08 10:10:44,942 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 11:10:51] 2026-01-08 10:10:44,943 | INFO     | traces error code: 0
[2026-01-08 11:10:51] 2026-01-08 10:10:44,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 11:10:51] 2026-01-08 10:10:45,323 [wrapper] ==== pilot stdout END ====
[2026-01-08 11:10:51] 2026-01-08 10:10:45,419 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 11:10:51] 2026-01-08 10:10:45,525 [wrapper] pilotpid: 6865
[2026-01-08 11:10:51] 2026-01-08 10:10:45,629 [wrapper] Pilot exit status: 0
[2026-01-08 11:10:51] 2026-01-08 10:10:46,163 [wrapper] pandaids: 6962316296
[2026-01-08 11:10:51] 2026-01-08 10:10:47,277 [wrapper] cleanup supervisor_pilot 12620 6866
[2026-01-08 11:10:51] 2026-01-08 10:10:47,385 [wrapper] Test setup, not cleaning
[2026-01-08 11:10:51] 2026-01-08 10:10:47,477 [wrapper] apfmon messages muted
[2026-01-08 11:10:51] 2026-01-08 10:10:47,551 [wrapper] ==== wrapper stdout END ====
[2026-01-08 11:10:51] 2026-01-08 10:10:47,657 [wrapper] ==== wrapper stderr END ====
[2026-01-08 11:10:51]  *** Error codes and diagnostics ***
[2026-01-08 11:10:51]     "exeErrorCode": 0,
[2026-01-08 11:10:51]     "exeErrorDiag": "",
[2026-01-08 11:10:51]     "pilotErrorCode": 0,
[2026-01-08 11:10:51]     "pilotErrorDiag": "",
[2026-01-08 11:10:51]  *** Listing of results directory ***
[2026-01-08 11:10:51] total 444608
[2026-01-08 11:10:51] -rwx------. 1 boinc boinc     36322 Jan  7 21:55 runpilot2-wrapper.sh
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc      5112 Jan  7 21:56 queuedata.json
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc       100 Jan  8 04:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 11:10:51] -rwxr-xr-x. 1 boinc boinc      7986 Jan  8 04:58 run_atlas
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc       105 Jan  8 04:58 job.xml
[2026-01-08 11:10:51] -rw-r--r--. 2 boinc boinc 224304844 Jan  8 04:58 EVNT.47898824._000474.pool.root.1
[2026-01-08 11:10:51] drwxrwx--x. 2 boinc boinc        68 Jan  8 04:58 shared
[2026-01-08 11:10:51] -rw-r--r--. 2 boinc boinc    592394 Jan  8 04:58 input.tar.gz
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc      6390 Jan  8 04:58 init_data.xml
[2026-01-08 11:10:51] -rw-r--r--. 2 boinc boinc     15847 Jan  8 04:58 start_atlas.sh
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc         0 Jan  8 04:58 boinc_lockfile
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc      2518 Jan  8 04:58 pandaJob.out
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc    989835 Jan  8 05:02 agis_schedconf.cvmfs.json
[2026-01-08 11:10:51] drwx------. 5 boinc boinc      4096 Jan  8 05:03 pilot3
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc 220167256 Jan  8 11:06 HITS.47898826._012144.pool.root.1
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc       531 Jan  8 11:06 boinc_task_state.xml
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc      1016 Jan  8 11:07 memory_monitor_summary.json
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc   1516240 Jan  8 11:07 agis_ddmendpoints.agis.ALL.json
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc    542851 Jan  8 11:07 log.47898826._012144.job.log.tgz.1
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc        95 Jan  8 11:09 pilot_heartbeat.json
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc      7784 Jan  8 11:09 heartbeat.json
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc        28 Jan  8 11:10 wrapper_checkpoint.txt
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc      8192 Jan  8 11:10 boinc_mmap_file
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc      4883 Jan  8 11:10 pilotlog.txt
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc   2913035 Jan  8 11:10 log.47898826._012144.job.log.1
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc       357 Jan  8 11:10 output.list
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc       620 Jan  8 11:10 runtime_log
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc   3471360 Jan  8 11:10 result.tar.gz
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc      8817 Jan  8 11:10 runtime_log.err
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc       657 Jan  8 11:10 lRdLDmDkpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhdiKDmZsWLPn.diag
[2026-01-08 11:10:51] -rw-r--r--. 1 boinc boinc     20716 Jan  8 11:10 stderr.txt
[2026-01-08 11:10:51] HITS file was successfully produced:
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc 220167256 Jan  8 11:06 shared/HITS.pool.root.1
[2026-01-08 11:10:51]  *** Contents of shared directory: ***
[2026-01-08 11:10:51] total 438044
[2026-01-08 11:10:51] -rw-r--r--. 2 boinc boinc 224304844 Jan  8 04:58 ATLAS.root_0
[2026-01-08 11:10:51] -rw-r--r--. 2 boinc boinc    592394 Jan  8 04:58 input.tar.gz
[2026-01-08 11:10:51] -rw-r--r--. 2 boinc boinc     15847 Jan  8 04:58 start_atlas.sh
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc 220167256 Jan  8 11:06 HITS.pool.root.1
[2026-01-08 11:10:51] -rw-------. 1 boinc boinc   3471360 Jan  8 11:10 result.tar.gz
11:10:52 (3103): run_atlas exited; CPU time 81406.112973
11:10:52 (3103): called boinc_finish(0)

</stderr_txt>
]]>

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