Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:59:34 (587429): wrapper (7.7.26015): starting
13:59:34 (587429): wrapper: running run_atlas (--nthreads 12)
[2026-01-07 13:59:34] Arguments: --nthreads 12
[2026-01-07 13:59:34] Threads: 12
[2026-01-07 13:59:34] Checking for CVMFS
[2026-01-07 13:59:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 13:59:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 13:59:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 13:59:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 13:59:36] 2.11.3.0 826709 54279 244600 154880 1 378 38228908 45568000 14300 130560 0 406820058 99.777 266975941 26093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-07 13:59:36] CVMFS is ok
[2026-01-07 13:59:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 13:59:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 13:59:36] Further information can be found at the LHC@home message board.
[2026-01-07 13:59:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 13:59:36] Checking for apptainer binary...
[2026-01-07 13:59:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 13:59:36] Running /usr/bin/apptainer --version
[2026-01-07 13:59:36] apptainer version 1.4.1-1.el9
[2026-01-07 13:59:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 13:59:47] wns0171.triumf.lcg
[2026-01-07 13:59:47] apptainer works
[2026-01-07 13:59:47] Set ATHENA_PROC_NUMBER=12
[2026-01-07 13:59:47] Set ATHENA_CORE_NUMBER=12
[2026-01-07 13:59:47] Starting ATLAS job with PandaID=6962314881
[2026-01-07 13:59:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-07 14:04:21]  *** The last 200 lines of the pilot log: ***
[2026-01-07 14:04:21] 2026-01-07 22:03:46,693 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 14:04:21] 2026-01-07 22:03:46,700 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 14:04:21] 2026-01-07 22:03:46,700 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 14:04:21] 2026-01-07 22:03:46,700 | WARNING  | wrong length of table data, x=[1767823270.0], y=[34734.0] (must be same and length>=4)
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | could have reported an average CPU frequency of 3057 MHz (4 samples)
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | ..............................
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . Timing measurements:
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . get job = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . initial setup = 3 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . payload setup = 5 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . stage-in = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . payload execution = 40 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . stage-out = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . log creation = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | ..............................
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962314881/pilotlog.txt
[2026-01-07 14:04:21] 2026-01-07 22:03:46,820 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-07 14:04:21] - Log from pilotlog.txt -
[2026-01-07 14:04:21] 2026-01-07 22:03:46,692 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962314881/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 14:04:21] 2026-01-07 22:03:46,693 | INFO     | extracted standard info from prmon json
[2026-01-07 14:04:21] 2026-01-07 22:03:46,693 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 14:04:21] 2026-01-07 22:03:46,693 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 14:04:21] 2026-01-07 22:03:46,700 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 14:04:21] 2026-01-07 22:03:46,700 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 14:04:21] 2026-01-07 22:03:46,700 | WARNING  | wrong length of table data, x=[1767823270.0], y=[34734.0] (must be same and length>=4)
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | could have reported an average CPU frequency of 3057 MHz (4 samples)
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | ..............................
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . Timing measurements:
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . get job = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . initial setup = 3 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . payload setup = 5 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . stage-in = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . payload execution = 40 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . stage-out = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . log creation = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | ..............................
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962314881/pilotlog.txt
[2026-01-07 14:04:21] 2026-01-07 22:03:46,821 | WARNING  | 
[2026-01-07 14:04:21] [begin log extracts]
[2026-01-07 14:04:21] - Log from pilotlog.txt -
[2026-01-07 14:04:21] 2026-01-07 22:03:46,692 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6962314881/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 14:04:21] 2026-01-07 22:03:46,693 | INFO     | extracted standard info from prmon json
[2026-01-07 14:04:21] 2026-01-07 22:03:46,693 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 14:04:21] 2026-01-07 22:03:46,693 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 14:04:21] 2026-01-07 22:03:46,700 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 14:04:21] 2026-01-07 22:03:46,700 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 14:04:21] 2026-01-07 22:03:46,700 | WARNING  | wrong length of table data, x=[1767823270.0], y=[34734.0] (must be same and length>=4)
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | could have reported an average CPU frequency of 3057 MHz (4 samples)
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | ..............................
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . Timing measurements:
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . get job = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . initial setup = 3 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . payload setup = 5 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . stage-in = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . payload execution = 40 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . stage-out = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | . log creation = 0 s
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | ..............................
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-07 14:04:21] 2026-01-07 22:03:46,701 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6962314881/pilotlog.txt
[2026-01-07 14:04:21] [end log extracts]
[2026-01-07 14:04:21] 2026-01-07 22:03:46,821 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-07 14:04:21] 2026-01-07 22:03:46,822 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | 
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | job summary report
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | --------------------------------------------------
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | PanDA job id: 6962314881
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | task id: 47898826
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-07 14:01:23,026 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | pilot state: failed 
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | transexitcode: 65
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | exeerrorcode: 65
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-07 14:04:21] 2026-01-07 22:03:47,111 | INFO     | exitcode: 65
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | cpuconsumptiontime: 12 s
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | nevents: 0
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | neventsw: 0
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | pid: 598203
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | pgrp: 598203
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | corecount: 12
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | event service: False
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | sizes: {0: 2283140, 1: 2283738, 2: 2284021, 10: 2284283, 13: 2284311, 50: 2307662, 52: 2311954, 53: 2311982, 185: 2312148}
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | --------------------------------------------------
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | 
[2026-01-07 14:04:21] 2026-01-07 22:03:47,112 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-07 14:04:21] 2026-01-07 22:03:47,210 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,210 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,210 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,210 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | job 6962314881 has completed (purged errors)
[2026-01-07 14:04:21] 2026-01-07 22:03:47,211 | INFO     | overall cleanup function is called
[2026-01-07 14:04:21] 2026-01-07 22:03:48,218 | INFO     | --- collectZombieJob: --- 10, [598203]
[2026-01-07 14:04:21] 2026-01-07 22:03:48,218 | INFO     | zombie collector waiting for pid 598203
[2026-01-07 14:04:21] 2026-01-07 22:03:48,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-07 14:04:21] 2026-01-07 22:03:48,218 | INFO     | collected zombie processes
[2026-01-07 14:04:21] 2026-01-07 22:03:48,218 | INFO     | will attempt to kill all subprocesses of pid=598203
[2026-01-07 14:04:21] 2026-01-07 22:03:48,537 | INFO     | process IDs to be killed: [598203] (in reverse order)
[2026-01-07 14:04:21] 2026-01-07 22:03:48,598 | WARNING  | found no corresponding commands to process id(s)
[2026-01-07 14:04:21] 2026-01-07 22:03:48,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-07 14:04:21] 2026-01-07 22:03:48,628 | INFO     | did not find any defunct processes belonging to 598203
[2026-01-07 14:04:21] 2026-01-07 22:03:48,636 | INFO     | did not find any defunct processes belonging to 598203
[2026-01-07 14:04:21] 2026-01-07 22:03:48,636 | INFO     | ready for new job
[2026-01-07 14:04:21] 2026-01-07 22:03:48,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-07 14:04:21] 2026-01-07 22:03:48,638 | INFO     | ***************************************
[2026-01-07 14:04:21] 2026-01-07 22:03:48,638 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-07 14:04:21] 2026-01-07 22:03:48,638 | INFO     | ***************************************
[2026-01-07 14:04:21] 2026-01-07 22:03:48,638 | INFO     | 
[2026-01-07 14:04:21] 2026-01-07 22:03:48,640 | INFO     | architecture information:
[2026-01-07 14:04:21] 2026-01-07 22:03:48,640 | INFO     | executing command: cat /etc/os-release
[2026-01-07 14:04:21] 2026-01-07 22:03:48,698 | INFO     | cat /etc/os-release:
[2026-01-07 14:04:21] NAME="CentOS Linux"
[2026-01-07 14:04:21] VERSION="7 (Core)"
[2026-01-07 14:04:21] ID="centos"
[2026-01-07 14:04:21] ID_LIKE="rhel fedora"
[2026-01-07 14:04:21] VERSION_ID="7"
[2026-01-07 14:04:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-07 14:04:21] ANSI_COLOR="0;31"
[2026-01-07 14:04:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-07 14:04:21] HOME_URL="https://www.centos.org/"
[2026-01-07 14:04:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-07 14:04:21] 
[2026-01-07 14:04:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-07 14:04:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-07 14:04:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-07 14:04:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-07 14:04:21] 
[2026-01-07 14:04:21] 2026-01-07 22:03:48,698 | INFO     | ***************************************
[2026-01-07 14:04:21] 2026-01-07 22:03:49,201 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-07 14:04:21] 2026-01-07 22:03:49,401 | INFO     | sufficient remaining disk space (2475675353088 B)
[2026-01-07 14:04:21] 2026-01-07 22:03:49,401 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-07 14:04:21] 2026-01-07 22:03:49,401 | INFO     | current server update state: UPDATING_FINAL
[2026-01-07 14:04:21] 2026-01-07 22:03:49,401 | INFO     | update_server=False
[2026-01-07 14:04:21] 2026-01-07 22:03:49,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-07 14:04:21] 2026-01-07 22:03:49,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-07 14:04:21] 2026-01-07 22:03:49,402 | INFO     | aborting loop
[2026-01-07 14:04:21] 2026-01-07 22:03:49,669 | INFO     | all data control threads have been joined
[2026-01-07 14:04:21] 2026-01-07 22:03:50,080 | INFO     | all payload control threads have been joined
[2026-01-07 14:04:21] 2026-01-07 22:03:50,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-07 14:04:21] 2026-01-07 22:03:50,407 | INFO     | [job] retrieve thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:50,408 | INFO     | [job] job monitor thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:50,667 | INFO     | [job] create_data_payload thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:50,675 | INFO     | [data] control thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:50,933 | INFO     | all job control threads have been joined
[2026-01-07 14:04:21] 2026-01-07 22:03:51,014 | INFO     | [data] copytool_in thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:51,095 | INFO     | [payload] control thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:51,332 | INFO     | [payload] validate_pre thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:51,634 | INFO     | [job] validate thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:51,774 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:51,825 | INFO     | [payload] execute_payloads thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:51,870 | INFO     | [payload] validate_post thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:51,939 | INFO     | [job] control thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:51,981 | INFO     | [payload] failed_post thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:52,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-07 14:04:21] 2026-01-07 22:03:52,196 | INFO     | [data] copytool_out thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:52,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-07 14:04:21] 2026-01-07 22:03:53,026 | INFO     | [job] queue monitor thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:03:56,434 | INFO     | [data] queue_monitor thread has finished
[2026-01-07 14:04:21] 2026-01-07 22:04:11,810 | INFO     | [monitor] cgroup control has ended
[2026-01-07 14:04:21] 2026-01-07 22:04:12,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716833158976)>', '<ExcThread(monitor, started 139716504553216)>']
[2026-01-07 14:04:21] 2026-01-07 22:04:17,811 | INFO     | all workflow threads have been joined
[2026-01-07 14:04:21] 2026-01-07 22:04:17,812 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-07 14:04:21] 2026-01-07 22:04:17,812 | INFO     | traces error code: 0
[2026-01-07 14:04:21] 2026-01-07 22:04:17,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-07 14:04:21] 2026-01-07 22:04:19,748 | INFO     | PID=591314 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-07 14:04:21] 2026-01-07 22:04:19,748 | INFO     | .. there are 42 such processes running
[2026-01-07 14:04:21] 2026-01-07 22:04:19,748 | INFO     | found 0 job(s) in 20 queues
[2026-01-07 14:04:21] 2026-01-07 22:04:19,748 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-07 14:04:21] 2026-01-07 22:04:19,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-07 14:04:21] 2026-01-07 22:04:19,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-07 14:04:21] 2026-01-07 22:04:19,749 | INFO     | [monitor] control thread has ended
[2026-01-07 14:04:21] 2026-01-07 22:04:19,988 [wrapper] ==== pilot stdout END ====
[2026-01-07 14:04:21] 2026-01-07 22:04:19,998 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-07 14:04:21] 2026-01-07 22:04:20,021 [wrapper] pilotpid: 591314
[2026-01-07 14:04:21] 2026-01-07 22:04:20,032 [wrapper] Pilot exit status: 0
[2026-01-07 14:04:21] 2026-01-07 22:04:20,261 [wrapper] pandaids: 6962314881
[2026-01-07 14:04:21] 2026-01-07 22:04:20,515 [wrapper] cleanup supervisor_pilot  591320 591315
[2026-01-07 14:04:21] 2026-01-07 22:04:20,524 [wrapper] Test setup, not cleaning
[2026-01-07 14:04:21] 2026-01-07 22:04:20,555 [wrapper] apfmon messages muted
[2026-01-07 14:04:21] 2026-01-07 22:04:20,580 [wrapper] ==== wrapper stdout END ====
[2026-01-07 14:04:21] 2026-01-07 22:04:20,654 [wrapper] ==== wrapper stderr END ====
[2026-01-07 14:04:21]  *** Error codes and diagnostics ***
[2026-01-07 14:04:21]     "exeErrorCode": 65,
[2026-01-07 14:04:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-07 14:04:21]     "pilotErrorCode": 1305,
[2026-01-07 14:04:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-07 14:04:21]  *** Listing of results directory ***
[2026-01-07 14:04:21] total 223208
[2026-01-07 14:04:21] -rwx------. 1 boinc boinc     36322 Jan  7 12:54 runpilot2-wrapper.sh
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc      5112 Jan  7 12:55 queuedata.json
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc    579449 Jan  7 12:55 pilot3.tar.gz
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc       100 Jan  7 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-07 14:04:21] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 13:59 run_atlas
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc       105 Jan  7 13:59 job.xml
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc      6628 Jan  7 13:59 init_data.xml
[2026-01-07 14:04:21] -rw-r--r--. 2 boinc boinc 224428166 Jan  7 13:59 EVNT.47898824._000291.pool.root.1
[2026-01-07 14:04:21] -rw-r--r--. 2 boinc boinc     15847 Jan  7 13:59 start_atlas.sh
[2026-01-07 14:04:21] drwxrwx--x. 2 boinc boinc      4096 Jan  7 13:59 shared
[2026-01-07 14:04:21] -rw-r--r--. 2 boinc boinc    592393 Jan  7 13:59 input.tar.gz
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc         0 Jan  7 13:59 boinc_lockfile
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc      2518 Jan  7 13:59 pandaJob.out
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc    989785 Jan  7 14:00 agis_schedconf.cvmfs.json
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc   1516240 Jan  7 14:00 agis_ddmendpoints.agis.ALL.json
[2026-01-07 14:04:21] drwx------. 5 boinc boinc      4096 Jan  7 14:00 pilot3
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc       523 Jan  7 14:01 boinc_task_state.xml
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc       995 Jan  7 14:01 memory_monitor_summary.json
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc     21496 Jan  7 14:01 log.47898826._011573.job.log.tgz.1
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc      8403 Jan  7 14:03 heartbeat.json
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc      8192 Jan  7 14:04 boinc_mmap_file
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc        22 Jan  7 14:04 wrapper_checkpoint.txt
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc       822 Jan  7 14:04 pilotlog.txt
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc        95 Jan  7 14:04 pilot_heartbeat.json
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc     89093 Jan  7 14:04 log.47898826._011573.job.log.1
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc       188 Jan  7 14:04 output.list
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc       620 Jan  7 14:04 runtime_log
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc    133120 Jan  7 14:04 result.tar.gz
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc      8636 Jan  7 14:04 runtime_log.err
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc       644 Jan  7 14:04 gviNDmEjpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiaiKDmkFP1km.diag
[2026-01-07 14:04:21] -rw-r--r--. 1 boinc boinc     21793 Jan  7 14:04 stderr.txt
[2026-01-07 14:04:21] No HITS result produced
[2026-01-07 14:04:21]  *** Contents of shared directory: ***
[2026-01-07 14:04:21] total 219904
[2026-01-07 14:04:21] -rw-r--r--. 2 boinc boinc 224428166 Jan  7 13:59 ATLAS.root_0
[2026-01-07 14:04:21] -rw-r--r--. 2 boinc boinc     15847 Jan  7 13:59 start_atlas.sh
[2026-01-07 14:04:21] -rw-r--r--. 2 boinc boinc    592393 Jan  7 13:59 input.tar.gz
[2026-01-07 14:04:21] -rw-------. 1 boinc boinc    133120 Jan  7 14:04 result.tar.gz
14:04:22 (587429): run_atlas exited; CPU time 20.900454
14:04:22 (587429): called boinc_finish(0)

</stderr_txt>
]]>

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