Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:05:29 (1594374): wrapper (7.7.26015): starting
00:05:29 (1594374): wrapper: running run_atlas (--nthreads 3)
[2026-01-08 00:05:29] Arguments: --nthreads 3
[2026-01-08 00:05:29] Threads: 3
[2026-01-08 00:05:29] Checking for CVMFS
[2026-01-08 00:05:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-08 00:05:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-08 00:05:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-08 00:05:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-08 00:05:29] 2.9.2.0 1566360 112 51372 154883 3 9 22464329 36864001 0 130560 0 71561 99.960 8376 22699 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-08 00:05:29] CVMFS is ok
[2026-01-08 00:05:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 00:05:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 00:05:29] Further information can be found at the LHC@home message board.
[2026-01-08 00:05:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 00:05:29] Checking for apptainer binary...
[2026-01-08 00:05:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-08 00:05:29] Running /usr/bin/apptainer --version
[2026-01-08 00:05:29] apptainer version 1.4.1-1.1
[2026-01-08 00:05:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 00:05:29] magicA161a
[2026-01-08 00:05:29] apptainer works
[2026-01-08 00:05:29] Set ATHENA_PROC_NUMBER=3
[2026-01-08 00:05:29] Set ATHENA_CORE_NUMBER=3
[2026-01-08 00:05:29] Starting ATLAS job with PandaID=6962314780
[2026-01-08 00:05:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 01:58:49]  *** The last 200 lines of the pilot log: ***
[2026-01-08 01:58:49] 2026-01-08 00:58:04,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 01:58:49] 2026-01-08 00:58:04,568 | INFO     | ***************************************
[2026-01-08 01:58:49] 2026-01-08 00:58:04,568 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 01:58:49] 2026-01-08 00:58:04,568 | INFO     | ***************************************
[2026-01-08 01:58:49] 2026-01-08 00:58:04,568 | INFO     | 
[2026-01-08 01:58:49] 2026-01-08 00:58:04,568 | INFO     | architecture information:
[2026-01-08 01:58:49] 2026-01-08 00:58:04,568 | INFO     | executing command: cat /etc/os-release
[2026-01-08 01:58:49] 2026-01-08 00:58:04,577 | INFO     | cat /etc/os-release:
[2026-01-08 01:58:49] NAME="CentOS Linux"
[2026-01-08 01:58:49] VERSION="7 (Core)"
[2026-01-08 01:58:49] ID="centos"
[2026-01-08 01:58:49] ID_LIKE="rhel fedora"
[2026-01-08 01:58:49] VERSION_ID="7"
[2026-01-08 01:58:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 01:58:49] ANSI_COLOR="0;31"
[2026-01-08 01:58:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 01:58:49] HOME_URL="https://www.centos.org/"
[2026-01-08 01:58:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 01:58:49] 
[2026-01-08 01:58:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 01:58:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 01:58:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 01:58:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 01:58:49] 
[2026-01-08 01:58:49] 2026-01-08 00:58:04,577 | INFO     | ***************************************
[2026-01-08 01:58:49] 2026-01-08 00:58:05,080 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-08 01:58:49] 2026-01-08 00:58:05,092 | INFO     | sufficient remaining disk space (383642501120 B)
[2026-01-08 01:58:49] 2026-01-08 00:58:05,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 01:58:49] 2026-01-08 00:58:05,092 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 01:58:49] 2026-01-08 00:58:05,093 | INFO     | update_server=False
[2026-01-08 01:58:49] 2026-01-08 00:58:05,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 01:58:49] 2026-01-08 00:58:05,093 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 01:58:49] 2026-01-08 00:58:05,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 01:58:49] 2026-01-08 00:58:05,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 01:58:49] 2026-01-08 00:58:05,220 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 01:58:49] 2026-01-08 00:58:05,220 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 01:58:49] 2026-01-08 00:58:05,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 01:58:49] 2026-01-08 00:58:05,220 | INFO     | will abort loop
[2026-01-08 01:58:49] 2026-01-08 00:58:05,554 | INFO     | all data control threads have been joined
[2026-01-08 01:58:49] 2026-01-08 00:58:05,772 | INFO     | all payload control threads have been joined
[2026-01-08 01:58:49] 2026-01-08 00:58:06,098 | INFO     | [job] retrieve thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:06,099 | INFO     | [job] queue monitor thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:06,114 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:06,123 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:06,226 | INFO     | [job] job monitor thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:06,353 | INFO     | all job control threads have been joined
[2026-01-08 01:58:49] 2026-01-08 00:58:06,443 | INFO     | [payload] failed_post thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:06,559 | INFO     | [data] control thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:06,602 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:06,778 | INFO     | [payload] control thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:06,969 | INFO     | [data] copytool_in thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:07,099 | INFO     | [data] copytool_out thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:07,131 | INFO     | [payload] validate_post thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:07,359 | INFO     | [job] control thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:07,522 | INFO     | [job] validate thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:09,100 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:15,255 | INFO     | job.realtimelogging is not enabled
[2026-01-08 01:58:49] 2026-01-08 00:58:16,260 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 01:58:49] 2026-01-08 00:58:35,427 | INFO     | PID=1598093 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 01:58:49] 2026-01-08 00:58:35,428 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 01:58:49] 2026-01-08 00:58:35,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 01:58:49] 2026-01-08 00:58:35,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 01:58:49] 2026-01-08 00:58:42,784 | INFO     | [monitor] cgroup control has ended
[2026-01-08 01:58:49] 2026-01-08 00:58:43,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139766666118976)>', '<ExcThread(monitor, started 139765953328896)>']
[2026-01-08 01:58:49] 2026-01-08 00:58:44,476 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 01:58:49] 2026-01-08 00:58:44,476 | INFO     | [monitor] control thread has ended
[2026-01-08 01:58:49] 2026-01-08 00:58:48,894 | INFO     | all workflow threads have been joined
[2026-01-08 01:58:49] 2026-01-08 00:58:48,894 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 01:58:49] 2026-01-08 00:58:48,894 | INFO     | traces error code: 0
[2026-01-08 01:58:49] 2026-01-08 00:58:48,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 01:58:49] 2026-01-08 00:58:48,944 [wrapper] ==== pilot stdout END ====
[2026-01-08 01:58:49] 2026-01-08 00:58:48,946 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 01:58:49] 2026-01-08 00:58:48,948 [wrapper] pilotpid: 1598093
[2026-01-08 01:58:49] 2026-01-08 00:58:48,951 [wrapper] Pilot exit status: 0
[2026-01-08 01:58:49] 2026-01-08 00:58:48,958 [wrapper] pandaids: 6962314780
[2026-01-08 01:58:49] 2026-01-08 00:58:48,973 [wrapper] cleanup supervisor_pilot 1619028 1598094
[2026-01-08 01:58:49] 2026-01-08 00:58:48,975 [wrapper] Test setup, not cleaning
[2026-01-08 01:58:49] 2026-01-08 00:58:48,978 [wrapper] apfmon messages muted
[2026-01-08 01:58:49] 2026-01-08 00:58:48,980 [wrapper] ==== wrapper stdout END ====
[2026-01-08 01:58:49] 2026-01-08 00:58:48,982 [wrapper] ==== wrapper stderr END ====
[2026-01-08 01:58:49]  *** Error codes and diagnostics ***
[2026-01-08 01:58:49]     "exeErrorCode": 0,
[2026-01-08 01:58:49]     "exeErrorDiag": "",
[2026-01-08 01:58:49]     "pilotErrorCode": 0,
[2026-01-08 01:58:49]     "pilotErrorDiag": "",
[2026-01-08 01:58:49]  *** Listing of results directory ***
[2026-01-08 01:58:49] total 438024
[2026-01-08 01:58:49] -rwx------ 1 boinc boinc     36322 Jan  7 21:54 runpilot2-wrapper.sh
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc      5112 Jan  7 21:55 queuedata.json
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc    579449 Jan  7 21:55 pilot3.tar.gz
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc       100 Jan  8 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 01:58:49] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 00:05 run_atlas
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc       105 Jan  8 00:05 job.xml
[2026-01-08 01:58:49] -rw-r--r-- 2 boinc boinc 223187333 Jan  8 00:05 EVNT.47898824._000287.pool.root.1
[2026-01-08 01:58:49] -rw-r--r-- 2 boinc boinc    592394 Jan  8 00:05 input.tar.gz
[2026-01-08 01:58:49] -rw-r--r-- 2 boinc boinc     15847 Jan  8 00:05 start_atlas.sh
[2026-01-08 01:58:49] drwxrwx--x 2 boinc boinc      4096 Jan  8 00:05 shared
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc         0 Jan  8 00:05 boinc_setup_complete
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc      6447 Jan  8 00:05 init_data.xml
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc         0 Jan  8 00:05 boinc_lockfile
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc      2516 Jan  8 00:05 pandaJob.out
[2026-01-08 01:58:49] -rw------- 1 boinc boinc    989785 Jan  8 00:05 agis_schedconf.cvmfs.json
[2026-01-08 01:58:49] -rw------- 1 boinc boinc   1516240 Jan  8 00:05 agis_ddmendpoints.agis.ALL.json
[2026-01-08 01:58:49] drwx------ 5 boinc boinc      4096 Jan  8 00:05 pilot3
[2026-01-08 01:58:49] -rw------- 1 boinc boinc 218941941 Jan  8 01:57 HITS.47898826._011472.pool.root.1
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc       529 Jan  8 01:57 boinc_task_state.xml
[2026-01-08 01:58:49] -rw------- 1 boinc boinc      1028 Jan  8 01:57 memory_monitor_summary.json
[2026-01-08 01:58:49] -rw------- 1 boinc boinc    274690 Jan  8 01:57 log.47898826._011472.job.log.tgz.1
[2026-01-08 01:58:49] -rw------- 1 boinc boinc      7746 Jan  8 01:58 heartbeat.json
[2026-01-08 01:58:49] -rw------- 1 boinc boinc        95 Jan  8 01:58 pilot_heartbeat.json
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc        27 Jan  8 01:58 wrapper_checkpoint.txt
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc      8192 Jan  8 01:58 boinc_mmap_file
[2026-01-08 01:58:49] -rw------- 1 boinc boinc      5010 Jan  8 01:58 pilotlog.txt
[2026-01-08 01:58:49] -rw------- 1 boinc boinc    975369 Jan  8 01:58 log.47898826._011472.job.log.1
[2026-01-08 01:58:49] -rw------- 1 boinc boinc       357 Jan  8 01:58 output.list
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc       620 Jan  8 01:58 runtime_log
[2026-01-08 01:58:49] -rw------- 1 boinc boinc   1269760 Jan  8 01:58 result.tar.gz
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc      8917 Jan  8 01:58 runtime_log.err
[2026-01-08 01:58:49] -rw------- 1 boinc boinc       663 Jan  8 01:58 diqMDmEjpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxZiKDmcserim.diag
[2026-01-08 01:58:49] -rw-r--r-- 1 boinc boinc      9772 Jan  8 01:58 stderr.txt
[2026-01-08 01:58:49] HITS file was successfully produced:
[2026-01-08 01:58:49] -rw------- 1 boinc boinc 218941941 Jan  8 01:57 shared/HITS.pool.root.1
[2026-01-08 01:58:49]  *** Contents of shared directory: ***
[2026-01-08 01:58:49] total 433616
[2026-01-08 01:58:49] -rw-r--r-- 2 boinc boinc 223187333 Jan  8 00:05 ATLAS.root_0
[2026-01-08 01:58:49] -rw-r--r-- 2 boinc boinc    592394 Jan  8 00:05 input.tar.gz
[2026-01-08 01:58:49] -rw-r--r-- 2 boinc boinc     15847 Jan  8 00:05 start_atlas.sh
[2026-01-08 01:58:49] -rw------- 1 boinc boinc 218941941 Jan  8 01:57 HITS.pool.root.1
[2026-01-08 01:58:49] -rw------- 1 boinc boinc   1269760 Jan  8 01:58 result.tar.gz
01:58:50 (1594374): run_atlas exited; CPU time 19521.124294
01:58:50 (1594374): called boinc_finish(0)

</stderr_txt>
]]>

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