Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:14:56 (365175): wrapper (7.7.26015): starting
23:14:56 (365175): wrapper: running run_atlas (--nthreads 4)
[2026-01-07 23:14:56] Arguments: --nthreads 4
[2026-01-07 23:14:56] Threads: 4
[2026-01-07 23:14:56] Checking for CVMFS
[2026-01-07 23:14:56] No cvmfs_config command found, will try listing directly
[2026-01-07 23:14:56] CVMFS is ok
[2026-01-07 23:14:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 23:14:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 23:14:56] Further information can be found at the LHC@home message board.
[2026-01-07 23:14:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:14:56] Checking for apptainer binary...
[2026-01-07 23:14:56] which: no apptainer in ((null))
[2026-01-07 23:14:56] apptainer is not installed, using version from CVMFS
[2026-01-07 23:14:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:14:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-01-07 23:14:57] apptainer works
[2026-01-07 23:14:57] Set ATHENA_PROC_NUMBER=4
[2026-01-07 23:14:57] Set ATHENA_CORE_NUMBER=4
[2026-01-07 23:14:57] Starting ATLAS job with PandaID=6962314337
[2026-01-07 23:14:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 03:39:02]  *** The last 200 lines of the pilot log: ***
[2026-01-08 03:39:02] 2026-01-08 02:16:39,107 | INFO     | executing command: lscpu
[2026-01-08 03:39:02] 2026-01-08 02:16:39,166 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 03:39:02] 2026-01-08 02:16:40,483 | INFO     | time since job start (14490s) is within the limit (174528.0s)
[2026-01-08 03:39:02] 2026-01-08 02:16:40,844 | INFO     | monitor loop #1052: job 0:6962314337 is in state 'finished'
[2026-01-08 03:39:02] 2026-01-08 02:16:40,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 03:39:02] 2026-01-08 02:16:42,489 | INFO     | time since job start (14492s) is within the limit (174528.0s)
[2026-01-08 03:39:02] 2026-01-08 02:16:43,348 | INFO     | monitor loop #1053: job 0:6962314337 is in state 'finished'
[2026-01-08 03:39:02] 2026-01-08 02:16:43,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 03:39:02] 2026-01-08 02:16:44,494 | INFO     | time since job start (14494s) is within the limit (174528.0s)
[2026-01-08 03:39:02] 2026-01-08 02:16:45,573 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-08 03:39:02] 2026-01-08 02:16:45,583 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2781.6669218750008
[2026-01-08 03:39:02] 2026-01-08 02:16:45,596 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6962314337/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 03:39:02] 2026-01-08 02:16:45,596 | INFO     | extracted standard info from prmon json
[2026-01-08 03:39:02] 2026-01-08 02:16:45,597 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 03:39:02] 2026-01-08 02:16:45,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 03:39:02] 2026-01-08 02:16:45,597 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 03:39:02] 2026-01-08 02:16:45,597 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 03:39:02] 2026-01-08 02:16:45,602 | INFO     | fitting pss+swap vs Time
[2026-01-08 03:39:02] 2026-01-08 02:16:45,603 | INFO     | sum of square deviations: 4127772278.0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,605 | INFO     | sum of deviations: -80241097690.99988
[2026-01-08 03:39:02] 2026-01-08 02:16:45,605 | INFO     | mean x: 1767831336.0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,605 | INFO     | mean y: 2410401.9493670887
[2026-01-08 03:39:02] 2026-01-08 02:16:45,605 | INFO     | intersect: 34367854370.17082
[2026-01-08 03:39:02] 2026-01-08 02:16:45,606 | INFO     | chi2: 1.7360877386795046
[2026-01-08 03:39:02] 2026-01-08 02:16:45,606 | INFO     | sum of square deviations: 3871990738.0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,607 | INFO     | sum of deviations: -77561030116.99998
[2026-01-08 03:39:02] 2026-01-08 02:16:45,608 | INFO     | mean x: 1767831183.5
[2026-01-08 03:39:02] 2026-01-08 02:16:45,608 | INFO     | mean y: 2411999.827586207
[2026-01-08 03:39:02] 2026-01-08 02:16:45,608 | INFO     | intersect: 35414378851.80388
[2026-01-08 03:39:02] 2026-01-08 02:16:45,608 | INFO     | chi2: 1.7291662192949337
[2026-01-08 03:39:02] 2026-01-08 02:16:45,608 | INFO     | current chi2=1.7291662192949337 (change=0.3986848838547456 %)
[2026-01-08 03:39:02] 2026-01-08 02:16:45,608 | INFO     | right removable region: 231
[2026-01-08 03:39:02] 2026-01-08 02:16:45,609 | INFO     | sum of square deviations: 3871990738.0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,610 | INFO     | sum of deviations: -105962316515.99997
[2026-01-08 03:39:02] 2026-01-08 02:16:45,610 | INFO     | mean x: 1767831488.5
[2026-01-08 03:39:02] 2026-01-08 02:16:45,611 | INFO     | mean y: 2425518.4913793104
[2026-01-08 03:39:02] 2026-01-08 02:16:45,611 | INFO     | intersect: 48381549438.64481
[2026-01-08 03:39:02] 2026-01-08 02:16:45,611 | INFO     | chi2: 0.46576146745351205
[2026-01-08 03:39:02] 2026-01-08 02:16:45,611 | INFO     | current chi2=0.46576146745351205 (change=73.17177829919027 %)
[2026-01-08 03:39:02] 2026-01-08 02:16:45,612 | INFO     | sum of square deviations: 3627000098.0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,613 | INFO     | sum of deviations: -95914768555.00002
[2026-01-08 03:39:02] 2026-01-08 02:16:45,613 | INFO     | mean x: 1767831641.0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,613 | INFO     | mean y: 2419260.9030837
[2026-01-08 03:39:02] 2026-01-08 02:16:45,613 | INFO     | intersect: 46752118215.755684
[2026-01-08 03:39:02] 2026-01-08 02:16:45,614 | INFO     | chi2: 0.4584933318440834
[2026-01-08 03:39:02] 2026-01-08 02:16:45,614 | INFO     | current chi2=0.4584933318440834 (change=1.5604845220808363 %)
[2026-01-08 03:39:02] 2026-01-08 02:16:45,614 | INFO     | left removable region: 20
[2026-01-08 03:39:02] 2026-01-08 02:16:45,614 | INFO     | sum of square deviations: 2912836010.0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,616 | INFO     | sum of deviations: -71322424392.0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,616 | INFO     | mean x: 1767831763.0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,616 | INFO     | mean y: 2406638.7251184834
[2026-01-08 03:39:02] 2026-01-08 02:16:45,616 | INFO     | intersect: 43288759465.13898
[2026-01-08 03:39:02] 2026-01-08 02:16:45,616 | INFO     | chi2: 0.41577852283094363
[2026-01-08 03:39:02] 2026-01-08 02:16:45,616 | INFO     | current memory leak: -24.49 B/s (using 211 data points, chi2=0.42)
[2026-01-08 03:39:02] 2026-01-08 02:16:45,617 | INFO     | could have reported an average CPU frequency of 2745 MHz (11 samples)
[2026-01-08 03:39:02] 2026-01-08 02:16:45,617 | INFO     | ..............................
[2026-01-08 03:39:02] 2026-01-08 02:16:45,617 | INFO     | . Timing measurements:
[2026-01-08 03:39:02] 2026-01-08 02:16:45,617 | INFO     | . get job = 0 s
[2026-01-08 03:39:02] 2026-01-08 02:16:45,617 | INFO     | . initial setup = 1 s
[2026-01-08 03:39:02] 2026-01-08 02:16:45,618 | INFO     | . payload setup = 6 s
[2026-01-08 03:39:02] 2026-01-08 02:16:45,618 | INFO     | . stage-in = 0 s
[2026-01-08 03:39:02] 2026-01-08 02:16:45,618 | INFO     | . payload execution = 14458 s
[2026-01-08 03:39:02] 2026-01-08 02:16:45,618 | INFO     | . stage-out = 1 s
[2026-01-08 03:39:02] 2026-01-08 02:16:45,618 | INFO     | . log creation = 0 s
[2026-01-08 03:39:02] 2026-01-08 02:16:45,618 | INFO     | ..............................
[2026-01-08 03:39:02] 2026-01-08 02:16:45,743 | INFO     | 
[2026-01-08 03:39:02] 2026-01-08 02:16:45,744 | INFO     | job summary report
[2026-01-08 03:39:02] 2026-01-08 02:16:45,744 | INFO     | --------------------------------------------------
[2026-01-08 03:39:02] 2026-01-08 02:16:45,744 | INFO     | PanDA job id: 6962314337
[2026-01-08 03:39:02] 2026-01-08 02:16:45,744 | INFO     | task id: 47898826
[2026-01-08 03:39:02] 2026-01-08 02:16:45,744 | INFO     | errors: (none)
[2026-01-08 03:39:02] 2026-01-08 02:16:45,744 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 03:39:02] 2026-01-08 02:16:45,744 | INFO     | pilot state: finished 
[2026-01-08 03:39:02] 2026-01-08 02:16:45,744 | INFO     | transexitcode: 0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,744 | INFO     | exeerrorcode: 0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | exeerrordiag: 
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | exitcode: 0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | exitmsg: OK
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | cpuconsumptiontime: 56136 s
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | nevents: 400
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | neventsw: 0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | pid: 376534
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | pgrp: 376534
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | corecount: 4
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | event service: False
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | sizes: {0: 2283975, 5: 2284237, 11: 2284293, 14468: 2315002, 14470: 2324022, 14472: 2324078, 14479: 2324400}
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | --------------------------------------------------
[2026-01-08 03:39:02] 2026-01-08 02:16:45,745 | INFO     | 
[2026-01-08 03:39:02] 2026-01-08 02:16:45,746 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2026-01-08 03:39:02] 2026-01-08 02:16:45,769 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,769 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,770 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,771 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 03:39:02] 2026-01-08 02:16:45,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,771 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 03:39:02] 2026-01-08 02:16:45,771 | INFO     | job 6962314337 has completed (purged errors)
[2026-01-08 03:39:02] 2026-01-08 02:16:45,771 | INFO     | overall cleanup function is called
[2026-01-08 03:39:02] 2026-01-08 02:16:46,778 | INFO     | --- collectZombieJob: --- 10, [376534]
[2026-01-08 03:39:02] 2026-01-08 02:16:46,779 | INFO     | zombie collector waiting for pid 376534
[2026-01-08 03:39:02] 2026-01-08 02:16:46,779 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 03:39:02] 2026-01-08 02:16:46,779 | INFO     | collected zombie processes
[2026-01-08 03:39:02] 2026-01-08 02:16:46,779 | INFO     | will attempt to kill all subprocesses of pid=376534
[2026-01-08 03:39:02] 2026-01-08 02:16:47,128 | INFO     | process IDs to be killed: [376534] (in reverse order)
[2026-01-08 03:39:02] 2026-01-08 02:16:47,241 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 03:39:02] 2026-01-08 02:16:47,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 03:39:02] 2026-01-08 02:16:47,255 | INFO     | did not find any defunct processes belonging to 376534
[2026-01-08 03:39:02] 2026-01-08 02:16:47,268 | INFO     | did not find any defunct processes belonging to 376534
[2026-01-08 03:39:02] 2026-01-08 02:16:47,269 | INFO     | ready for new job
[2026-01-08 03:39:02] 2026-01-08 02:16:47,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 03:39:02] 2026-01-08 02:16:47,272 | INFO     | ***************************************
[2026-01-08 03:39:02] 2026-01-08 02:16:47,272 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 03:39:02] 2026-01-08 02:16:47,272 | INFO     | ***************************************
[2026-01-08 03:39:02] 2026-01-08 02:16:47,272 | INFO     | 
[2026-01-08 03:39:02] 2026-01-08 02:16:47,276 | INFO     | architecture information:
[2026-01-08 03:39:02] 2026-01-08 02:16:47,277 | INFO     | executing command: cat /etc/os-release
[2026-01-08 03:39:02] 2026-01-08 02:16:47,293 | INFO     | cat /etc/os-release:
[2026-01-08 03:39:02] NAME="CentOS Linux"
[2026-01-08 03:39:02] VERSION="7 (Core)"
[2026-01-08 03:39:02] ID="centos"
[2026-01-08 03:39:02] ID_LIKE="rhel fedora"
[2026-01-08 03:39:02] VERSION_ID="7"
[2026-01-08 03:39:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 03:39:02] ANSI_COLOR="0;31"
[2026-01-08 03:39:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 03:39:02] HOME_URL="https://www.centos.org/"
[2026-01-08 03:39:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 03:39:02] 
[2026-01-08 03:39:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 03:39:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 03:39:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 03:39:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 03:39:02] 
[2026-01-08 03:39:02] 2026-01-08 02:16:47,294 | INFO     | ***************************************
[2026-01-08 03:39:02] 2026-01-08 02:16:47,797 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-01-08 03:39:02] 2026-01-08 02:16:47,814 | INFO     | sufficient remaining disk space (687510388736 B)
[2026-01-08 03:39:02] 2026-01-08 02:16:47,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 03:39:02] 2026-01-08 02:16:47,815 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 03:39:02] 2026-01-08 02:16:47,815 | INFO     | update_server=False
[2026-01-08 03:39:02] 2026-01-08 02:16:47,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 03:39:02] 2026-01-08 02:16:47,815 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 03:39:02] 2026-01-08 02:16:47,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 03:39:02] 2026-01-08 02:16:47,816 | INFO     | aborting loop
[2026-01-08 03:39:02] 2026-01-08 02:16:48,440 | INFO     | all payload control threads have been joined
[2026-01-08 03:39:02] 2026-01-08 02:16:48,542 | INFO     | all job control threads have been joined
[2026-01-08 03:39:02] 2026-01-08 02:16:48,820 | INFO     | [job] retrieve thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:48,822 | INFO     | [job] job monitor thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:48,843 | INFO     | all data control threads have been joined
[2026-01-08 03:39:02] 2026-01-08 02:16:49,004 | INFO     | [payload] validate_post thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:49,202 | INFO     | [payload] failed_post thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:49,221 | INFO     | [job] validate thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:49,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 03:39:02] 2026-01-08 02:16:49,444 | INFO     | [payload] control thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:49,547 | INFO     | [job] control thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:49,585 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:49,588 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:49,613 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:49,670 | INFO     | [data] copytool_in thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:49,821 | INFO     | [data] copytool_out thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:49,848 | INFO     | [data] control thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:49,979 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:50,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 03:39:02] 2026-01-08 02:16:51,731 | INFO     | [job] queue monitor thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:16:53,361 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 03:39:02] 2026-01-08 02:17:18,019 | INFO     | PID=369567 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 03:39:02] 2026-01-08 02:17:18,020 | INFO     | .. there are 3 such processes running
[2026-01-08 03:39:02] 2026-01-08 02:17:18,021 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 03:39:02] 2026-01-08 02:17:18,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 03:39:02] 2026-01-08 02:17:18,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 03:39:02] 2026-01-08 02:17:32,497 | INFO     | [monitor] cgroup control has ended
[2026-01-08 03:39:02] 2026-01-08 02:17:33,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22428973410112)>', '<ExcThread(monitor, started 22428732319488)>']
[2026-01-08 03:39:02] 2026-01-08 02:17:34,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 03:39:02] 2026-01-08 02:17:34,089 | INFO     | [monitor] control thread has ended
[2026-01-08 03:39:02] 2026-01-08 02:17:38,135 | INFO     | all workflow threads have been joined
[2026-01-08 03:39:02] 2026-01-08 02:17:38,135 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 03:39:02] 2026-01-08 02:17:38,136 | INFO     | traces error code: 0
[2026-01-08 03:39:02] 2026-01-08 02:17:38,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 03:39:02] 2026-01-08 02:17:38,359 [wrapper] ==== pilot stdout END ====
[2026-01-08 03:39:02] 2026-01-08 02:17:38,362 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 03:39:02] 2026-01-08 02:17:38,366 [wrapper] pilotpid: 369567
[2026-01-08 03:39:02] 2026-01-08 02:17:38,369 [wrapper] Pilot exit status: 0
[2026-01-08 03:39:02] 2026-01-08 02:17:38,381 [wrapper] pandaids: 6962314337
[2026-01-08 03:39:02] 2026-01-08 02:17:38,456 [wrapper] cleanup supervisor_pilot  578217 369568
[2026-01-08 03:39:02] 2026-01-08 02:17:38,459 [wrapper] Test setup, not cleaning
[2026-01-08 03:39:02] 2026-01-08 02:17:38,462 [wrapper] apfmon messages muted
[2026-01-08 03:39:02] 2026-01-08 02:17:38,466 [wrapper] ==== wrapper stdout END ====
[2026-01-08 03:39:02] 2026-01-08 02:17:38,469 [wrapper] ==== wrapper stderr END ====
[2026-01-08 03:39:02]  *** Error codes and diagnostics ***
[2026-01-08 03:39:02]     "exeErrorCode": 0,
[2026-01-08 03:39:02]     "exeErrorDiag": "",
[2026-01-08 03:39:02]     "pilotErrorCode": 0,
[2026-01-08 03:39:02]     "pilotErrorDiag": "",
[2026-01-08 03:39:02]  *** Listing of results directory ***
[2026-01-08 03:39:02] total 444392
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc    579449 Jan  7 21:49 pilot3.tar.gz
[2026-01-08 03:39:02] -rwx------ 1 boinc boinc     36322 Jan  7 21:54 runpilot2-wrapper.sh
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc      5112 Jan  7 21:55 queuedata.json
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc       100 Jan  7 22:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 03:39:02] -rwxr-xr-x 1 boinc boinc      7986 Jan  7 22:16 run_atlas
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc       105 Jan  7 22:16 job.xml
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc      6637 Jan  7 23:14 init_data.xml
[2026-01-08 03:39:02] -rw-r--r-- 2 boinc boinc 227288816 Jan  7 23:14 EVNT.47898824._000272.pool.root.1
[2026-01-08 03:39:02] drwxrwx--x 2 boinc boinc      4096 Jan  7 23:14 shared
[2026-01-08 03:39:02] -rw-r--r-- 2 boinc boinc    592398 Jan  7 23:14 input.tar.gz
[2026-01-08 03:39:02] -rw-r--r-- 2 boinc boinc     15847 Jan  7 23:14 start_atlas.sh
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc         0 Jan  7 23:14 boinc_lockfile
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc      2516 Jan  7 23:14 pandaJob.out
[2026-01-08 03:39:02] -rw------- 1 boinc boinc    989785 Jan  7 23:15 agis_schedconf.cvmfs.json
[2026-01-08 03:39:02] drwx------ 5 boinc boinc      4096 Jan  7 23:15 pilot3
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc       528 Jan  8 03:15 boinc_task_state.xml
[2026-01-08 03:39:02] -rw------- 1 boinc boinc 218976848 Jan  8 03:15 HITS.47898826._011098.pool.root.1
[2026-01-08 03:39:02] -rw------- 1 boinc boinc      1033 Jan  8 03:16 memory_monitor_summary.json
[2026-01-08 03:39:02] -rw------- 1 boinc boinc   1516240 Jan  8 03:16 agis_ddmendpoints.agis.ALL.json
[2026-01-08 03:39:02] -rw------- 1 boinc boinc    401345 Jan  8 03:16 log.47898826._011098.job.log.tgz.1
[2026-01-08 03:39:02] -rw------- 1 boinc boinc      7828 Jan  8 03:16 heartbeat.json
[2026-01-08 03:39:02] -rw------- 1 boinc boinc        95 Jan  8 03:17 pilot_heartbeat.json
[2026-01-08 03:39:02] -rw------- 1 boinc boinc      4832 Jan  8 03:17 pilotlog.txt
[2026-01-08 03:39:02] -rw------- 1 boinc boinc   2036547 Jan  8 03:17 log.47898826._011098.job.log.1
[2026-01-08 03:39:02] -rw------- 1 boinc boinc       357 Jan  8 03:17 output.list
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc       620 Jan  8 03:17 runtime_log
[2026-01-08 03:39:02] -rw------- 1 boinc boinc   2457600 Jan  8 03:17 result.tar.gz
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc      9206 Jan  8 03:17 runtime_log.err
[2026-01-08 03:39:02] -rw------- 1 boinc boinc       666 Jan  8 03:17 cZqMDm3ipx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTYiKDmRarJPn.diag
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc        26 Jan  8 03:38 wrapper_checkpoint.txt
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc      8192 Jan  8 03:39 boinc_mmap_file
[2026-01-08 03:39:02] -rw-r--r-- 1 boinc boinc     21165 Jan  8 03:39 stderr.txt
[2026-01-08 03:39:02] HITS file was successfully produced:
[2026-01-08 03:39:02] -rw------- 1 boinc boinc 218976848 Jan  8 03:15 shared/HITS.pool.root.1
[2026-01-08 03:39:02]  *** Contents of shared directory: ***
[2026-01-08 03:39:02] total 438816
[2026-01-08 03:39:02] -rw-r--r-- 2 boinc boinc 227288816 Jan  7 23:14 ATLAS.root_0
[2026-01-08 03:39:02] -rw-r--r-- 2 boinc boinc    592398 Jan  7 23:14 input.tar.gz
[2026-01-08 03:39:02] -rw-r--r-- 2 boinc boinc     15847 Jan  7 23:14 start_atlas.sh
[2026-01-08 03:39:02] -rw------- 1 boinc boinc 218976848 Jan  8 03:15 HITS.pool.root.1
[2026-01-08 03:39:02] -rw------- 1 boinc boinc   2457600 Jan  8 03:17 result.tar.gz
03:39:04 (365175): run_atlas exited; CPU time 56774.541755
03:39:04 (365175): called boinc_finish(0)

</stderr_txt>
]]>

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