Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:04:22 (3967010): wrapper (7.7.26015): starting
17:04:22 (3967010): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 17:04:22] Arguments: --nthreads 8
[2026-01-07 17:04:22] Threads: 8
[2026-01-07 17:04:22] Checking for CVMFS
[2026-01-07 17:04:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 17:04:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 17:04:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 17:04:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 17:04:25] 2.13.3.0 512609 14597 172076 154880 3 303 20331899 39288832 8541 16776704 0 6560678 99.176 16470086 41667 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-07 17:04:25] CVMFS is ok
[2026-01-07 17:04:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 17:04:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 17:04:25] Further information can be found at the LHC@home message board.
[2026-01-07 17:04:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 17:04:25] Checking for apptainer binary...
[2026-01-07 17:04:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 17:04:25] Running /usr/bin/apptainer --version
[2026-01-07 17:04:25] apptainer version 1.4.5-2.el9
[2026-01-07 17:04:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 17:04:26] c-210-7.aglt2.org
[2026-01-07 17:04:26] apptainer works
[2026-01-07 17:04:26] Set ATHENA_PROC_NUMBER=8
[2026-01-07 17:04:26] Set ATHENA_CORE_NUMBER=8
[2026-01-07 17:04:26] Starting ATLAS job with PandaID=6962314657
[2026-01-07 17:04:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 00:44:41]  *** The last 200 lines of the pilot log: ***
[2026-01-08 00:44:41] 2026-01-08 05:43:35,745 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 00:44:41] 2026-01-08 05:43:35,752 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.182575
[2026-01-08 00:44:41] 2026-01-08 05:43:35,760 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962314657/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 00:44:41] 2026-01-08 05:43:35,761 | INFO     | extracted standard info from prmon json
[2026-01-08 00:44:41] 2026-01-08 05:43:35,761 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 00:44:41] 2026-01-08 05:43:35,761 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 00:44:41] 2026-01-08 05:43:35,761 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 00:44:41] 2026-01-08 05:43:35,761 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 00:44:41] 2026-01-08 05:43:35,771 | INFO     | fitting pss+swap vs Time
[2026-01-08 00:44:41] 2026-01-08 05:43:35,772 | INFO     | sum of square deviations: 27876402560.25
[2026-01-08 00:44:41] 2026-01-08 05:43:35,778 | INFO     | sum of deviations: 271508240238.8753
[2026-01-08 00:44:41] 2026-01-08 05:43:35,778 | INFO     | mean x: 1767837349.8125
[2026-01-08 00:44:41] 2026-01-08 05:43:35,778 | INFO     | mean y: 2462503.629464286
[2026-01-08 00:44:41] 2026-01-08 05:43:35,778 | INFO     | intersect: -17215770976.775703
[2026-01-08 00:44:41] 2026-01-08 05:43:35,779 | INFO     | chi2: 5.734207017872764
[2026-01-08 00:44:41] 2026-01-08 05:43:35,780 | INFO     | sum of square deviations: 26953439001.539467
[2026-01-08 00:44:41] 2026-01-08 05:43:35,785 | INFO     | sum of deviations: 296275018327.7202
[2026-01-08 00:44:41] 2026-01-08 05:43:35,786 | INFO     | mean x: 1767837197.3273137
[2026-01-08 00:44:41] 2026-01-08 05:43:35,786 | INFO     | mean y: 2466552.39503386
[2026-01-08 00:44:41] 2026-01-08 05:43:35,786 | INFO     | intersect: -19429784671.972294
[2026-01-08 00:44:41] 2026-01-08 05:43:35,787 | INFO     | chi2: 5.037758493918219
[2026-01-08 00:44:41] 2026-01-08 05:43:35,787 | INFO     | current chi2=5.037758493918219 (change=12.145507160515951 %)
[2026-01-08 00:44:41] 2026-01-08 05:43:35,787 | INFO     | right removable region: 442
[2026-01-08 00:44:41] 2026-01-08 05:43:35,788 | INFO     | sum of square deviations: 26953107407.191887
[2026-01-08 00:44:41] 2026-01-08 05:43:35,793 | INFO     | sum of deviations: 140384156942.83063
[2026-01-08 00:44:41] 2026-01-08 05:43:35,794 | INFO     | mean x: 1767837502.3250563
[2026-01-08 00:44:41] 2026-01-08 05:43:35,794 | INFO     | mean y: 2484140.7720090295
[2026-01-08 00:44:41] 2026-01-08 05:43:35,794 | INFO     | intersect: -9205225145.824074
[2026-01-08 00:44:41] 2026-01-08 05:43:35,795 | INFO     | chi2: 2.4875511184226777
[2026-01-08 00:44:41] 2026-01-08 05:43:35,795 | INFO     | current chi2=2.4875511184226777 (change=56.61909117216539 %)
[2026-01-08 00:44:41] 2026-01-08 05:43:35,796 | INFO     | sum of square deviations: 26050498731.49777
[2026-01-08 00:44:41] 2026-01-08 05:43:35,801 | INFO     | sum of deviations: 55528210837.36988
[2026-01-08 00:44:41] 2026-01-08 05:43:35,802 | INFO     | mean x: 1767837654.8310502
[2026-01-08 00:44:41] 2026-01-08 05:43:35,802 | INFO     | mean y: 2498466.3698630137
[2026-01-08 00:44:41] 2026-01-08 05:43:35,802 | INFO     | intersect: -3765754227.579851
[2026-01-08 00:44:41] 2026-01-08 05:43:35,803 | INFO     | chi2: 1.1934289077835525
[2026-01-08 00:44:41] 2026-01-08 05:43:35,803 | INFO     | current chi2=1.1934289077835525 (change=52.02394439474717 %)
[2026-01-08 00:44:41] 2026-01-08 05:43:35,803 | INFO     | sum of square deviations: 25168289128.443424
[2026-01-08 00:44:41] 2026-01-08 05:43:35,809 | INFO     | sum of deviations: 15327011078.415665
[2026-01-08 00:44:41] 2026-01-08 05:43:35,809 | INFO     | mean x: 1767837807.334873
[2026-01-08 00:44:41] 2026-01-08 05:43:35,809 | INFO     | mean y: 2505411.376443418
[2026-01-08 00:44:41] 2026-01-08 05:43:35,809 | INFO     | intersect: -1074074308.4282708
[2026-01-08 00:44:41] 2026-01-08 05:43:35,810 | INFO     | chi2: 0.9112416680248911
[2026-01-08 00:44:41] 2026-01-08 05:43:35,810 | INFO     | current chi2=0.9112416680248911 (change=23.6450816565808 %)
[2026-01-08 00:44:41] 2026-01-08 05:43:35,810 | INFO     | left removable region: 30
[2026-01-08 00:44:41] 2026-01-08 05:43:35,811 | INFO     | sum of square deviations: 21680794766.104347
[2026-01-08 00:44:41] 2026-01-08 05:43:35,816 | INFO     | sum of deviations: 18255948355.378654
[2026-01-08 00:44:41] 2026-01-08 05:43:35,816 | INFO     | mean x: 1767838081.8373787
[2026-01-08 00:44:41] 2026-01-08 05:43:35,816 | INFO     | mean y: 2514307.572815534
[2026-01-08 00:44:41] 2026-01-08 05:43:35,816 | INFO     | intersect: -1486063997.3678865
[2026-01-08 00:44:41] 2026-01-08 05:43:35,817 | INFO     | chi2: 0.06996882320840923
[2026-01-08 00:44:41] 2026-01-08 05:43:35,817 | INFO     | current memory leak: 0.84 B/s (using 412 data points, chi2=0.07)
[2026-01-08 00:44:41] 2026-01-08 05:43:35,818 | INFO     | could have reported an average CPU frequency of 2600 MHz (18 samples)
[2026-01-08 00:44:41] 2026-01-08 05:43:35,818 | INFO     | ..............................
[2026-01-08 00:44:41] 2026-01-08 05:43:35,819 | INFO     | . Timing measurements:
[2026-01-08 00:44:41] 2026-01-08 05:43:35,819 | INFO     | . get job = 0 s
[2026-01-08 00:44:41] 2026-01-08 05:43:35,819 | INFO     | . initial setup = 4 s
[2026-01-08 00:44:41] 2026-01-08 05:43:35,819 | INFO     | . payload setup = 57 s
[2026-01-08 00:44:41] 2026-01-08 05:43:35,819 | INFO     | . stage-in = 0 s
[2026-01-08 00:44:41] 2026-01-08 05:43:35,819 | INFO     | . payload execution = 27333 s
[2026-01-08 00:44:41] 2026-01-08 05:43:35,819 | INFO     | . stage-out = 2 s
[2026-01-08 00:44:41] 2026-01-08 05:43:35,819 | INFO     | . log creation = 0 s
[2026-01-08 00:44:41] 2026-01-08 05:43:35,819 | INFO     | ..............................
[2026-01-08 00:44:41] 2026-01-08 05:43:36,015 | INFO     | 
[2026-01-08 00:44:41] 2026-01-08 05:43:36,015 | INFO     | job summary report
[2026-01-08 00:44:41] 2026-01-08 05:43:36,015 | INFO     | --------------------------------------------------
[2026-01-08 00:44:41] 2026-01-08 05:43:36,015 | INFO     | PanDA job id: 6962314657
[2026-01-08 00:44:41] 2026-01-08 05:43:36,015 | INFO     | task id: 47898826
[2026-01-08 00:44:41] 2026-01-08 05:43:36,016 | INFO     | errors: (none)
[2026-01-08 00:44:41] 2026-01-08 05:43:36,016 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 00:44:41] 2026-01-08 05:43:36,016 | INFO     | pilot state: finished 
[2026-01-08 00:44:41] 2026-01-08 05:43:36,016 | INFO     | transexitcode: 0
[2026-01-08 00:44:41] 2026-01-08 05:43:36,016 | INFO     | exeerrorcode: 0
[2026-01-08 00:44:41] 2026-01-08 05:43:36,016 | INFO     | exeerrordiag: 
[2026-01-08 00:44:41] 2026-01-08 05:43:36,016 | INFO     | exitcode: 0
[2026-01-08 00:44:41] 2026-01-08 05:43:36,016 | INFO     | exitmsg: OK
[2026-01-08 00:44:41] 2026-01-08 05:43:36,016 | INFO     | cpuconsumptiontime: 70272 s
[2026-01-08 00:44:41] 2026-01-08 05:43:36,017 | INFO     | nevents: 400
[2026-01-08 00:44:41] 2026-01-08 05:43:36,017 | INFO     | neventsw: 0
[2026-01-08 00:44:41] 2026-01-08 05:43:36,017 | INFO     | pid: 3979890
[2026-01-08 00:44:41] 2026-01-08 05:43:36,017 | INFO     | pgrp: 3979890
[2026-01-08 00:44:41] 2026-01-08 05:43:36,017 | INFO     | corecount: 8
[2026-01-08 00:44:41] 2026-01-08 05:43:36,017 | INFO     | event service: False
[2026-01-08 00:44:41] 2026-01-08 05:43:36,017 | INFO     | sizes: {0: 2283793, 1: 2283992, 12: 2283992, 23: 2284020, 30: 2284310, 34: 2284338, 27395: 2320865, 27398: 2329863, 27400: 2329919, 27404: 2330113}
[2026-01-08 00:44:41] 2026-01-08 05:43:36,017 | INFO     | --------------------------------------------------
[2026-01-08 00:44:41] 2026-01-08 05:43:36,017 | INFO     | 
[2026-01-08 00:44:41] 2026-01-08 05:43:36,017 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 00:44:41] 2026-01-08 05:43:36,037 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,037 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,037 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,037 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,038 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,038 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,038 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,038 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,039 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,039 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,039 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 00:44:41] 2026-01-08 05:43:36,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,039 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 00:44:41] 2026-01-08 05:43:36,039 | INFO     | job 6962314657 has completed (purged errors)
[2026-01-08 00:44:41] 2026-01-08 05:43:36,039 | INFO     | overall cleanup function is called
[2026-01-08 00:44:41] 2026-01-08 05:43:37,048 | INFO     | --- collectZombieJob: --- 10, [3979890]
[2026-01-08 00:44:41] 2026-01-08 05:43:37,048 | INFO     | zombie collector waiting for pid 3979890
[2026-01-08 00:44:41] 2026-01-08 05:43:37,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 00:44:41] 2026-01-08 05:43:37,048 | INFO     | collected zombie processes
[2026-01-08 00:44:41] 2026-01-08 05:43:37,048 | INFO     | will attempt to kill all subprocesses of pid=3979890
[2026-01-08 00:44:41] 2026-01-08 05:43:37,271 | INFO     | process IDs to be killed: [3979890] (in reverse order)
[2026-01-08 00:44:41] 2026-01-08 05:43:37,341 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 00:44:41] 2026-01-08 05:43:37,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 00:44:41] 2026-01-08 05:43:37,349 | INFO     | did not find any defunct processes belonging to 3979890
[2026-01-08 00:44:41] 2026-01-08 05:43:37,357 | INFO     | did not find any defunct processes belonging to 3979890
[2026-01-08 00:44:41] 2026-01-08 05:43:37,357 | INFO     | ready for new job
[2026-01-08 00:44:41] 2026-01-08 05:43:37,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 00:44:41] 2026-01-08 05:43:37,361 | INFO     | ***************************************
[2026-01-08 00:44:41] 2026-01-08 05:43:37,361 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 00:44:41] 2026-01-08 05:43:37,361 | INFO     | ***************************************
[2026-01-08 00:44:41] 2026-01-08 05:43:37,361 | INFO     | 
[2026-01-08 00:44:41] 2026-01-08 05:43:37,363 | INFO     | architecture information:
[2026-01-08 00:44:41] 2026-01-08 05:43:37,363 | INFO     | executing command: cat /etc/os-release
[2026-01-08 00:44:41] 2026-01-08 05:43:37,378 | INFO     | cat /etc/os-release:
[2026-01-08 00:44:41] NAME="CentOS Linux"
[2026-01-08 00:44:41] VERSION="7 (Core)"
[2026-01-08 00:44:41] ID="centos"
[2026-01-08 00:44:41] ID_LIKE="rhel fedora"
[2026-01-08 00:44:41] VERSION_ID="7"
[2026-01-08 00:44:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 00:44:41] ANSI_COLOR="0;31"
[2026-01-08 00:44:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 00:44:41] HOME_URL="https://www.centos.org/"
[2026-01-08 00:44:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 00:44:41] 
[2026-01-08 00:44:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 00:44:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 00:44:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 00:44:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 00:44:41] 
[2026-01-08 00:44:41] 2026-01-08 05:43:37,378 | INFO     | ***************************************
[2026-01-08 00:44:41] 2026-01-08 05:43:37,881 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 00:44:41] 2026-01-08 05:43:37,898 | INFO     | sufficient remaining disk space (53293875200 B)
[2026-01-08 00:44:41] 2026-01-08 05:43:37,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 00:44:41] 2026-01-08 05:43:37,898 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 00:44:41] 2026-01-08 05:43:37,898 | INFO     | update_server=False
[2026-01-08 00:44:41] 2026-01-08 05:43:37,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 00:44:41] 2026-01-08 05:43:37,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 00:44:41] 2026-01-08 05:43:37,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 00:44:41] 2026-01-08 05:43:37,991 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 00:44:41] 2026-01-08 05:43:37,991 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 00:44:41] 2026-01-08 05:43:37,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 00:44:41] 2026-01-08 05:43:37,992 | INFO     | will abort loop
[2026-01-08 00:44:41] 2026-01-08 05:43:38,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 00:44:41] 2026-01-08 05:43:38,529 | INFO     | all job control threads have been joined
[2026-01-08 00:44:41] 2026-01-08 05:43:38,709 | INFO     | all data control threads have been joined
[2026-01-08 00:44:41] 2026-01-08 05:43:38,903 | INFO     | [job] retrieve thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:38,905 | INFO     | [job] queue monitor thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:38,996 | INFO     | [job] job monitor thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:39,082 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:39,178 | INFO     | all payload control threads have been joined
[2026-01-08 00:44:41] 2026-01-08 05:43:39,231 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:39,376 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:39,417 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:39,468 | INFO     | [job] validate thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:39,534 | INFO     | [job] control thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:39,714 | INFO     | [data] control thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:39,870 | INFO     | [data] copytool_in thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:39,964 | INFO     | [payload] failed_post thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:40,023 | INFO     | [data] copytool_out thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:40,183 | INFO     | [payload] control thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:40,272 | INFO     | [payload] validate_post thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:43:41,905 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 00:44:41] 2026-01-08 05:44:08,456 | INFO     | PID=3971302 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 00:44:41] 2026-01-08 05:44:08,456 | INFO     | .. there are 7 such processes running
[2026-01-08 00:44:41] 2026-01-08 05:44:08,457 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 00:44:41] 2026-01-08 05:44:08,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 00:44:41] 2026-01-08 05:44:08,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 00:44:41] 2026-01-08 05:44:34,437 | INFO     | [monitor] cgroup control has ended
[2026-01-08 00:44:41] 2026-01-08 05:44:36,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140634333570880)>', '<ExcThread(monitor, started 140633956128512)>']
[2026-01-08 00:44:41] 2026-01-08 05:44:36,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 00:44:41] 2026-01-08 05:44:36,599 | INFO     | [monitor] control thread has ended
[2026-01-08 00:44:41] 2026-01-08 05:44:41,182 | INFO     | all workflow threads have been joined
[2026-01-08 00:44:41] 2026-01-08 05:44:41,182 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 00:44:41] 2026-01-08 05:44:41,183 | INFO     | traces error code: 0
[2026-01-08 00:44:41] 2026-01-08 05:44:41,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 00:44:41] 2026-01-08 05:44:41,327 [wrapper] ==== pilot stdout END ====
[2026-01-08 00:44:41] 2026-01-08 05:44:41,329 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 00:44:41] 2026-01-08 05:44:41,332 [wrapper] pilotpid: 3971302
[2026-01-08 00:44:41] 2026-01-08 05:44:41,334 [wrapper] Pilot exit status: 0
[2026-01-08 00:44:41] 2026-01-08 05:44:41,343 [wrapper] pandaids: 6962314657
[2026-01-08 00:44:41] 2026-01-08 05:44:41,388 [wrapper] cleanup supervisor_pilot  470264 3971303
[2026-01-08 00:44:41] 2026-01-08 05:44:41,391 [wrapper] Test setup, not cleaning
[2026-01-08 00:44:41] 2026-01-08 05:44:41,394 [wrapper] apfmon messages muted
[2026-01-08 00:44:41] 2026-01-08 05:44:41,397 [wrapper] ==== wrapper stdout END ====
[2026-01-08 00:44:41] 2026-01-08 05:44:41,399 [wrapper] ==== wrapper stderr END ====
[2026-01-08 00:44:41]  *** Error codes and diagnostics ***
[2026-01-08 00:44:41]     "exeErrorCode": 0,
[2026-01-08 00:44:41]     "exeErrorDiag": "",
[2026-01-08 00:44:41]     "pilotErrorCode": 0,
[2026-01-08 00:44:41]     "pilotErrorDiag": "",
[2026-01-08 00:44:41]  *** Listing of results directory ***
[2026-01-08 00:44:41] total 442164
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 15:49 pilot3.tar.gz
[2026-01-08 00:44:41] -rwx------. 1 boincer umatlas     36322 Jan  7 15:54 runpilot2-wrapper.sh
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 15:55 queuedata.json
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas       100 Jan  7 17:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 00:44:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 17:04 run_atlas
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas       105 Jan  7 17:04 job.xml
[2026-01-08 00:44:41] -rw-r--r--. 2 boincer umatlas 225608600 Jan  7 17:04 EVNT.47898824._000282.pool.root.1
[2026-01-08 00:44:41] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 17:04 start_atlas.sh
[2026-01-08 00:44:41] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 17:04 shared
[2026-01-08 00:44:41] -rw-r--r--. 2 boincer umatlas    592396 Jan  7 17:04 input.tar.gz
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas         0 Jan  7 17:04 boinc_lockfile
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas      2516 Jan  7 17:04 pandaJob.out
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas        57 Jan  7 17:04 setup.sh.local
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas    989785 Jan  7 17:05 agis_schedconf.cvmfs.json
[2026-01-08 00:44:41] drwx------. 5 boincer umatlas      4096 Jan  7 17:05 pilot3
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas      6658 Jan  8 00:38 init_data.xml
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas 215280112 Jan  8 00:42 HITS.47898826._011349.pool.root.1
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas       531 Jan  8 00:42 boinc_task_state.xml
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas      1064 Jan  8 00:43 memory_monitor_summary.json
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas   1516240 Jan  8 00:43 agis_ddmendpoints.agis.ALL.json
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas    617665 Jan  8 00:43 log.47898826._011349.job.log.tgz.1
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas      7831 Jan  8 00:43 heartbeat.json
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas        95 Jan  8 00:44 pilot_heartbeat.json
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 00:44 boinc_mmap_file
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas        28 Jan  8 00:44 wrapper_checkpoint.txt
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas      5009 Jan  8 00:44 pilotlog.txt
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas   3368973 Jan  8 00:44 log.47898826._011349.job.log.1
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas       357 Jan  8 00:44 output.list
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas       620 Jan  8 00:44 runtime_log
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas   4003840 Jan  8 00:44 result.tar.gz
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas      9338 Jan  8 00:44 runtime_log.err
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas       660 Jan  8 00:44 6SYLDmDjpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJSdKDmbOpVsm.diag
[2026-01-08 00:44:41] -rw-r--r--. 1 boincer umatlas     21184 Jan  8 00:44 stderr.txt
[2026-01-08 00:44:41] HITS file was successfully produced:
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas 215280112 Jan  8 00:42 shared/HITS.pool.root.1
[2026-01-08 00:44:41]  *** Contents of shared directory: ***
[2026-01-08 00:44:41] total 435072
[2026-01-08 00:44:41] -rw-r--r--. 2 boincer umatlas 225608600 Jan  7 17:04 ATLAS.root_0
[2026-01-08 00:44:41] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 17:04 start_atlas.sh
[2026-01-08 00:44:41] -rw-r--r--. 2 boincer umatlas    592396 Jan  7 17:04 input.tar.gz
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas 215280112 Jan  8 00:42 HITS.pool.root.1
[2026-01-08 00:44:41] -rw-------. 1 boincer umatlas   4003840 Jan  8 00:44 result.tar.gz
00:44:42 (3967010): run_atlas exited; CPU time 70923.788294
00:44:42 (3967010): called boinc_finish(0)

</stderr_txt>
]]>

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