Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:13:09 (39908): wrapper (7.7.26015): starting
17:13:09 (39908): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 17:13:09] Arguments: --nthreads 8
[2026-01-07 17:13:09] Threads: 8
[2026-01-07 17:13:09] Checking for CVMFS
[2026-01-07 17:13:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 17:13:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 17:13:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 17:13:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 17:13:11] 2.13.3.0 6428 19219 151372 154880 0 226 38489894 39288832 7522 16776704 0 7817435 99.612 8906575 37545 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-07 17:13:11] CVMFS is ok
[2026-01-07 17:13:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 17:13:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 17:13:11] Further information can be found at the LHC@home message board.
[2026-01-07 17:13:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 17:13:11] Checking for apptainer binary...
[2026-01-07 17:13:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 17:13:11] Running /usr/bin/apptainer --version
[2026-01-07 17:13:11] apptainer version 1.4.5-2.el9
[2026-01-07 17:13:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 17:13:12] c-211-3.aglt2.org
[2026-01-07 17:13:12] apptainer works
[2026-01-07 17:13:12] Set ATHENA_PROC_NUMBER=8
[2026-01-07 17:13:12] Set ATHENA_CORE_NUMBER=8
[2026-01-07 17:13:12] Starting ATLAS job with PandaID=6962314083
[2026-01-07 17:13:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 04:29:40]  *** The last 200 lines of the pilot log: ***
[2026-01-08 04:29:40] 2026-01-08 08:53:40,170 | INFO     | time since job start (38370s) is within the limit (174528.0s)
[2026-01-08 04:29:40] 2026-01-08 08:53:40,602 | INFO     | monitor loop #2127: job 0:6962314083 is in state 'finished'
[2026-01-08 04:29:40] 2026-01-08 08:53:40,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 04:29:40] 2026-01-08 08:53:41,650 | INFO     | PID=44934 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 04:29:40] 2026-01-08 08:53:41,650 | INFO     | .. there are 8 such processes running
[2026-01-08 04:29:40] 2026-01-08 08:53:42,651 | INFO     | time since job start (38372s) is within the limit (174528.0s)
[2026-01-08 04:29:40] 2026-01-08 08:53:43,108 | INFO     | monitor loop #2128: job 0:6962314083 is in state 'finished'
[2026-01-08 04:29:40] 2026-01-08 08:53:43,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 04:29:40] 2026-01-08 08:53:44,657 | INFO     | time since job start (38374s) is within the limit (174528.0s)
[2026-01-08 04:29:40] 2026-01-08 08:53:44,992 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 04:29:40] 2026-01-08 08:53:45,000 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.0716500000003
[2026-01-08 04:29:40] 2026-01-08 08:53:45,008 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962314083/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 04:29:40] 2026-01-08 08:53:45,009 | INFO     | extracted standard info from prmon json
[2026-01-08 04:29:40] 2026-01-08 08:53:45,009 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 04:29:40] 2026-01-08 08:53:45,009 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 04:29:40] 2026-01-08 08:53:45,010 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 04:29:40] 2026-01-08 08:53:45,010 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 04:29:40] 2026-01-08 08:53:45,023 | INFO     | fitting pss+swap vs Time
[2026-01-08 04:29:40] 2026-01-08 08:53:45,024 | INFO     | sum of square deviations: 76432482873.81764
[2026-01-08 04:29:40] 2026-01-08 08:53:45,035 | INFO     | sum of deviations: -27375647977.27276
[2026-01-08 04:29:40] 2026-01-08 08:53:45,035 | INFO     | mean x: 1767843290.090909
[2026-01-08 04:29:40] 2026-01-08 08:53:45,035 | INFO     | mean y: 2526758.0398724084
[2026-01-08 04:29:40] 2026-01-08 08:53:45,036 | INFO     | intersect: 635711155.1555479
[2026-01-08 04:29:40] 2026-01-08 08:53:45,037 | INFO     | chi2: 2.7759625376005674
[2026-01-08 04:29:40] 2026-01-08 08:53:45,038 | INFO     | sum of square deviations: 74618504300.27664
[2026-01-08 04:29:40] 2026-01-08 08:53:45,050 | INFO     | sum of deviations: 12292548096.045
[2026-01-08 04:29:40] 2026-01-08 08:53:45,050 | INFO     | mean x: 1767843137.5916398
[2026-01-08 04:29:40] 2026-01-08 08:53:45,050 | INFO     | mean y: 2530071.70096463
[2026-01-08 04:29:40] 2026-01-08 08:53:45,050 | INFO     | intersect: -288701935.6796465
[2026-01-08 04:29:40] 2026-01-08 08:53:45,051 | INFO     | chi2: 2.0929877667540264
[2026-01-08 04:29:40] 2026-01-08 08:53:45,051 | INFO     | current chi2=2.0929877667540264 (change=24.603169588768207 %)
[2026-01-08 04:29:40] 2026-01-08 08:53:45,051 | INFO     | right removable region: 621
[2026-01-08 04:29:40] 2026-01-08 08:53:45,052 | INFO     | sum of square deviations: 74618124322.49673
[2026-01-08 04:29:40] 2026-01-08 08:53:45,063 | INFO     | sum of deviations: -149654924202.8794
[2026-01-08 04:29:40] 2026-01-08 08:53:45,064 | INFO     | mean x: 1767843442.6061094
[2026-01-08 04:29:40] 2026-01-08 08:53:45,064 | INFO     | mean y: 2537010.0209003217
[2026-01-08 04:29:40] 2026-01-08 08:53:45,064 | INFO     | intersect: 3548143105.161114
[2026-01-08 04:29:40] 2026-01-08 08:53:45,065 | INFO     | chi2: 1.0010287210092548
[2026-01-08 04:29:40] 2026-01-08 08:53:45,065 | INFO     | current chi2=1.0010287210092548 (change=63.93940093029842 %)
[2026-01-08 04:29:40] 2026-01-08 08:53:45,066 | INFO     | sum of square deviations: 72832734857.1248
[2026-01-08 04:29:40] 2026-01-08 08:53:45,077 | INFO     | sum of deviations: -165931944055.24475
[2026-01-08 04:29:40] 2026-01-08 08:53:45,077 | INFO     | mean x: 1767843595.1199353
[2026-01-08 04:29:40] 2026-01-08 08:53:45,077 | INFO     | mean y: 2538397.8816855755
[2026-01-08 04:29:40] 2026-01-08 08:53:45,078 | INFO     | intersect: 4030146658.0865126
[2026-01-08 04:29:40] 2026-01-08 08:53:45,079 | INFO     | chi2: 0.962637926056535
[2026-01-08 04:29:40] 2026-01-08 08:53:45,079 | INFO     | current chi2=0.962637926056535 (change=3.835134212134645 %)
[2026-01-08 04:29:40] 2026-01-08 08:53:45,079 | INFO     | left removable region: 20
[2026-01-08 04:29:40] 2026-01-08 08:53:45,080 | INFO     | sum of square deviations: 67311614311.298004
[2026-01-08 04:29:40] 2026-01-08 08:53:45,090 | INFO     | sum of deviations: -92652855095.17992
[2026-01-08 04:29:40] 2026-01-08 08:53:45,090 | INFO     | mean x: 1767843717.156406
[2026-01-08 04:29:40] 2026-01-08 08:53:45,091 | INFO     | mean y: 2538917.9168053246
[2026-01-08 04:29:40] 2026-01-08 08:53:45,091 | INFO     | intersect: 2435934245.4914136
[2026-01-08 04:29:40] 2026-01-08 08:53:45,092 | INFO     | chi2: 0.23868414810513985
[2026-01-08 04:29:40] 2026-01-08 08:53:45,092 | INFO     | current memory leak: -1.38 B/s (using 601 data points, chi2=0.24)
[2026-01-08 04:29:40] 2026-01-08 08:53:45,093 | INFO     | could have reported an average CPU frequency of 2600 MHz (24 samples)
[2026-01-08 04:29:40] 2026-01-08 08:53:45,094 | INFO     | ..............................
[2026-01-08 04:29:40] 2026-01-08 08:53:45,094 | INFO     | . Timing measurements:
[2026-01-08 04:29:40] 2026-01-08 08:53:45,094 | INFO     | . get job = 0 s
[2026-01-08 04:29:40] 2026-01-08 08:53:45,094 | INFO     | . initial setup = 5 s
[2026-01-08 04:29:40] 2026-01-08 08:53:45,094 | INFO     | . payload setup = 53 s
[2026-01-08 04:29:40] 2026-01-08 08:53:45,095 | INFO     | . stage-in = 0 s
[2026-01-08 04:29:40] 2026-01-08 08:53:45,095 | INFO     | . payload execution = 38240 s
[2026-01-08 04:29:40] 2026-01-08 08:53:45,095 | INFO     | . stage-out = 4 s
[2026-01-08 04:29:40] 2026-01-08 08:53:45,095 | INFO     | . log creation = 0 s
[2026-01-08 04:29:40] 2026-01-08 08:53:45,095 | INFO     | ..............................
[2026-01-08 04:29:40] 2026-01-08 08:53:45,218 | INFO     | 
[2026-01-08 04:29:40] 2026-01-08 08:53:45,219 | INFO     | job summary report
[2026-01-08 04:29:40] 2026-01-08 08:53:45,219 | INFO     | --------------------------------------------------
[2026-01-08 04:29:40] 2026-01-08 08:53:45,219 | INFO     | PanDA job id: 6962314083
[2026-01-08 04:29:40] 2026-01-08 08:53:45,220 | INFO     | task id: 47898826
[2026-01-08 04:29:40] 2026-01-08 08:53:45,220 | INFO     | errors: (none)
[2026-01-08 04:29:40] 2026-01-08 08:53:45,220 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 04:29:40] 2026-01-08 08:53:45,220 | INFO     | pilot state: finished 
[2026-01-08 04:29:40] 2026-01-08 08:53:45,220 | INFO     | transexitcode: 0
[2026-01-08 04:29:40] 2026-01-08 08:53:45,220 | INFO     | exeerrorcode: 0
[2026-01-08 04:29:40] 2026-01-08 08:53:45,220 | INFO     | exeerrordiag: 
[2026-01-08 04:29:40] 2026-01-08 08:53:45,220 | INFO     | exitcode: 0
[2026-01-08 04:29:40] 2026-01-08 08:53:45,221 | INFO     | exitmsg: OK
[2026-01-08 04:29:40] 2026-01-08 08:53:45,221 | INFO     | cpuconsumptiontime: 69429 s
[2026-01-08 04:29:40] 2026-01-08 08:53:45,221 | INFO     | nevents: 400
[2026-01-08 04:29:40] 2026-01-08 08:53:45,221 | INFO     | neventsw: 0
[2026-01-08 04:29:40] 2026-01-08 08:53:45,221 | INFO     | pid: 53747
[2026-01-08 04:29:40] 2026-01-08 08:53:45,221 | INFO     | pgrp: 53747
[2026-01-08 04:29:40] 2026-01-08 08:53:45,221 | INFO     | corecount: 8
[2026-01-08 04:29:40] 2026-01-08 08:53:45,221 | INFO     | event service: False
[2026-01-08 04:29:40] 2026-01-08 08:53:45,221 | INFO     | sizes: {0: 2283793, 1: 2283821, 2: 2283992, 13: 2284020, 23: 2284076, 31: 2284366, 34: 2284522, 38300: 2326075, 38305: 2335073, 38306: 2335129, 38313: 2335323}
[2026-01-08 04:29:40] 2026-01-08 08:53:45,222 | INFO     | --------------------------------------------------
[2026-01-08 04:29:40] 2026-01-08 08:53:45,222 | INFO     | 
[2026-01-08 04:29:40] 2026-01-08 08:53:45,222 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-08 04:29:40] 2026-01-08 08:53:45,249 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,249 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,249 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,269 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,272 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 04:29:40] 2026-01-08 08:53:45,272 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,272 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 04:29:40] 2026-01-08 08:53:45,272 | INFO     | job 6962314083 has completed (purged errors)
[2026-01-08 04:29:40] 2026-01-08 08:53:45,273 | INFO     | overall cleanup function is called
[2026-01-08 04:29:40] 2026-01-08 08:53:46,281 | INFO     | --- collectZombieJob: --- 10, [53747]
[2026-01-08 04:29:40] 2026-01-08 08:53:46,281 | INFO     | zombie collector waiting for pid 53747
[2026-01-08 04:29:40] 2026-01-08 08:53:46,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 04:29:40] 2026-01-08 08:53:46,282 | INFO     | collected zombie processes
[2026-01-08 04:29:40] 2026-01-08 08:53:46,282 | INFO     | will attempt to kill all subprocesses of pid=53747
[2026-01-08 04:29:40] 2026-01-08 08:53:46,526 | INFO     | process IDs to be killed: [53747] (in reverse order)
[2026-01-08 04:29:40] 2026-01-08 08:53:46,596 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 04:29:40] 2026-01-08 08:53:46,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 04:29:40] 2026-01-08 08:53:46,605 | INFO     | did not find any defunct processes belonging to 53747
[2026-01-08 04:29:40] 2026-01-08 08:53:46,613 | INFO     | did not find any defunct processes belonging to 53747
[2026-01-08 04:29:40] 2026-01-08 08:53:46,613 | INFO     | ready for new job
[2026-01-08 04:29:40] 2026-01-08 08:53:46,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 04:29:40] 2026-01-08 08:53:46,617 | INFO     | ***************************************
[2026-01-08 04:29:40] 2026-01-08 08:53:46,617 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 04:29:40] 2026-01-08 08:53:46,617 | INFO     | ***************************************
[2026-01-08 04:29:40] 2026-01-08 08:53:46,617 | INFO     | 
[2026-01-08 04:29:40] 2026-01-08 08:53:46,619 | INFO     | architecture information:
[2026-01-08 04:29:40] 2026-01-08 08:53:46,619 | INFO     | executing command: cat /etc/os-release
[2026-01-08 04:29:40] 2026-01-08 08:53:46,638 | INFO     | cat /etc/os-release:
[2026-01-08 04:29:40] NAME="CentOS Linux"
[2026-01-08 04:29:40] VERSION="7 (Core)"
[2026-01-08 04:29:40] ID="centos"
[2026-01-08 04:29:40] ID_LIKE="rhel fedora"
[2026-01-08 04:29:40] VERSION_ID="7"
[2026-01-08 04:29:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 04:29:40] ANSI_COLOR="0;31"
[2026-01-08 04:29:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 04:29:40] HOME_URL="https://www.centos.org/"
[2026-01-08 04:29:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 04:29:40] 
[2026-01-08 04:29:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 04:29:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 04:29:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 04:29:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 04:29:40] 
[2026-01-08 04:29:40] 2026-01-08 08:53:46,638 | INFO     | ***************************************
[2026-01-08 04:29:40] 2026-01-08 08:53:47,145 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-08 04:29:40] 2026-01-08 08:53:47,191 | INFO     | sufficient remaining disk space (52641660928 B)
[2026-01-08 04:29:40] 2026-01-08 08:53:47,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 04:29:40] 2026-01-08 08:53:47,192 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 04:29:40] 2026-01-08 08:53:47,192 | INFO     | update_server=False
[2026-01-08 04:29:40] 2026-01-08 08:53:47,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 04:29:40] 2026-01-08 08:53:47,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:29:40] 2026-01-08 08:53:47,193 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:29:40] 2026-01-08 08:53:47,193 | INFO     | aborting loop
[2026-01-08 04:29:40] 2026-01-08 08:53:47,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 04:29:40] 2026-01-08 08:53:47,839 | INFO     | all data control threads have been joined
[2026-01-08 04:29:40] 2026-01-08 08:53:48,132 | INFO     | all payload control threads have been joined
[2026-01-08 04:29:40] 2026-01-08 08:53:48,198 | INFO     | [job] retrieve thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:48,203 | INFO     | [job] queue monitor thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:48,207 | INFO     | [job] job monitor thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:48,237 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:48,248 | INFO     | all job control threads have been joined
[2026-01-08 04:29:40] 2026-01-08 08:53:48,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 04:29:40] 2026-01-08 08:53:48,690 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:48,856 | INFO     | [data] control thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:48,984 | INFO     | [payload] validate_post thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:49,108 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:49,119 | INFO     | [data] copytool_in thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:49,165 | INFO     | [job] validate thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:49,156 | INFO     | [payload] control thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:49,222 | INFO     | [data] copytool_out thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:49,254 | INFO     | [job] control thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:49,302 | INFO     | [payload] failed_post thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:49,590 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:53:52,510 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 04:29:40] 2026-01-08 08:54:18,466 | INFO     | PID=44934 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 04:29:40] 2026-01-08 08:54:18,467 | INFO     | .. there are 8 such processes running
[2026-01-08 04:29:40] 2026-01-08 08:54:18,468 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 04:29:40] 2026-01-08 08:54:18,468 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 04:29:40] 2026-01-08 08:54:18,468 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 04:29:40] 2026-01-08 08:54:25,182 | INFO     | [monitor] cgroup control has ended
[2026-01-08 04:29:40] 2026-01-08 08:54:26,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140688926992192)>', '<ExcThread(monitor, started 140688654046976)>']
[2026-01-08 04:29:40] 2026-01-08 08:54:26,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 04:29:40] 2026-01-08 08:54:26,513 | INFO     | [monitor] control thread has ended
[2026-01-08 04:29:40] 2026-01-08 08:54:31,318 | INFO     | all workflow threads have been joined
[2026-01-08 04:29:40] 2026-01-08 08:54:31,318 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 04:29:40] 2026-01-08 08:54:31,319 | INFO     | traces error code: 0
[2026-01-08 04:29:40] 2026-01-08 08:54:31,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 04:29:40] 2026-01-08 08:54:32,578 [wrapper] ==== pilot stdout END ====
[2026-01-08 04:29:40] 2026-01-08 08:54:32,581 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 04:29:40] 2026-01-08 08:54:32,583 [wrapper] pilotpid: 44934
[2026-01-08 04:29:40] 2026-01-08 08:54:32,619 [wrapper] Pilot exit status: 0
[2026-01-08 04:29:40] 2026-01-08 08:54:32,666 [wrapper] pandaids: 6962314083
[2026-01-08 04:29:40] 2026-01-08 08:54:32,718 [wrapper] cleanup supervisor_pilot  977836 44935
[2026-01-08 04:29:40] 2026-01-08 08:54:32,721 [wrapper] Test setup, not cleaning
[2026-01-08 04:29:40] 2026-01-08 08:54:32,724 [wrapper] apfmon messages muted
[2026-01-08 04:29:40] 2026-01-08 08:54:32,727 [wrapper] ==== wrapper stdout END ====
[2026-01-08 04:29:40] 2026-01-08 08:54:32,729 [wrapper] ==== wrapper stderr END ====
[2026-01-08 04:29:40]  *** Error codes and diagnostics ***
[2026-01-08 04:29:40]     "exeErrorCode": 0,
[2026-01-08 04:29:40]     "exeErrorDiag": "",
[2026-01-08 04:29:40]     "pilotErrorCode": 0,
[2026-01-08 04:29:40]     "pilotErrorDiag": "",
[2026-01-08 04:29:40]  *** Listing of results directory ***
[2026-01-08 04:29:40] total 437716
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 15:49 pilot3.tar.gz
[2026-01-08 04:29:40] -rwx------. 1 boincer umatlas     36322 Jan  7 15:53 runpilot2-wrapper.sh
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 15:53 queuedata.json
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas       100 Jan  7 17:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 04:29:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 17:13 run_atlas
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas       105 Jan  7 17:13 job.xml
[2026-01-08 04:29:40] -rw-r--r--. 2 boincer umatlas 224731790 Jan  7 17:13 EVNT.47898824._000697.pool.root.1
[2026-01-08 04:29:40] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 17:13 start_atlas.sh
[2026-01-08 04:29:40] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 17:13 shared
[2026-01-08 04:29:40] -rw-r--r--. 2 boincer umatlas    592396 Jan  7 17:13 input.tar.gz
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas         0 Jan  7 17:13 boinc_lockfile
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas      2516 Jan  7 17:13 pandaJob.out
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas        57 Jan  7 17:13 setup.sh.local
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas    989785 Jan  7 17:14 agis_schedconf.cvmfs.json
[2026-01-08 04:29:40] drwx------. 5 boincer umatlas      4096 Jan  7 17:14 pilot3
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas 209106905 Jan  8 03:52 HITS.47898826._010921.pool.root.1
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas       531 Jan  8 03:52 boinc_task_state.xml
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas      1053 Jan  8 03:53 memory_monitor_summary.json
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas   1516240 Jan  8 03:53 agis_ddmendpoints.agis.ALL.json
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas    735810 Jan  8 03:53 log.47898826._010921.job.log.tgz.1
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas      7814 Jan  8 03:53 heartbeat.json
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas        95 Jan  8 03:54 pilot_heartbeat.json
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas      4821 Jan  8 03:54 pilotlog.txt
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas   4506533 Jan  8 03:54 log.47898826._010921.job.log.1
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas       357 Jan  8 03:54 output.list
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas       620 Jan  8 03:54 runtime_log
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas   5263360 Jan  8 03:54 result.tar.gz
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas      9338 Jan  8 03:54 runtime_log.err
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas       657 Jan  8 03:54 EaMMDmRipx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyXiKDmar4MGn.diag
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas      6656 Jan  8 04:29 init_data.xml
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 04:29 boinc_mmap_file
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas        28 Jan  8 04:29 wrapper_checkpoint.txt
[2026-01-08 04:29:40] -rw-r--r--. 1 boincer umatlas      2133 Jan  8 04:29 stderr.txt
[2026-01-08 04:29:40] HITS file was successfully produced:
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas 209106905 Jan  8 03:52 shared/HITS.pool.root.1
[2026-01-08 04:29:40]  *** Contents of shared directory: ***
[2026-01-08 04:29:40] total 429416
[2026-01-08 04:29:40] -rw-r--r--. 2 boincer umatlas 224731790 Jan  7 17:13 ATLAS.root_0
[2026-01-08 04:29:40] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 17:13 start_atlas.sh
[2026-01-08 04:29:40] -rw-r--r--. 2 boincer umatlas    592396 Jan  7 17:13 input.tar.gz
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas 209106905 Jan  8 03:52 HITS.pool.root.1
[2026-01-08 04:29:40] -rw-------. 1 boincer umatlas   5263360 Jan  8 03:54 result.tar.gz
04:29:42 (39908): run_atlas exited; CPU time 70260.750203
04:29:42 (39908): called boinc_finish(0)

</stderr_txt>
]]>

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