Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:14 (1513831): wrapper (7.7.26015): starting
18:33:14 (1513831): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 18:33:14] Arguments: --nthreads 4
[2026-01-12 18:33:14] Threads: 4
[2026-01-12 18:33:14] Checking for CVMFS
[2026-01-12 18:33:14] No cvmfs_config command found, will try listing directly
[2026-01-12 18:33:14] CVMFS is ok
[2026-01-12 18:33:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 18:33:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 18:33:14] Further information can be found at the LHC@home message board.
[2026-01-12 18:33:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 18:33:14] Checking for apptainer binary...
[2026-01-12 18:33:14] which: no apptainer in ((null))
[2026-01-12 18:33:14] apptainer is not installed, using version from CVMFS
[2026-01-12 18:33:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 18:33:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-01-12 18:33:15] apptainer works
[2026-01-12 18:33:15] Set ATHENA_PROC_NUMBER=4
[2026-01-12 18:33:15] Set ATHENA_CORE_NUMBER=4
[2026-01-12 18:33:15] Starting ATLAS job with PandaID=6962314234
[2026-01-12 18:33:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 22:01:32]  *** The last 200 lines of the pilot log: ***
[2026-01-12 22:01:32] 2026-01-12 20:51:53,048 | INFO     | monitor loop #871: job 0:6962314234 is in state 'finished'
[2026-01-12 22:01:32] 2026-01-12 20:51:53,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 22:01:32] 2026-01-12 20:51:53,108 | INFO     | PID=1518007 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-12 22:01:32] 2026-01-12 20:51:53,108 | INFO     | .. there are 2 such processes running
[2026-01-12 22:01:32] 2026-01-12 20:51:54,109 | INFO     | time since job start (11910s) is within the limit (174528.0s)
[2026-01-12 22:01:32] 2026-01-12 20:51:55,551 | INFO     | monitor loop #872: job 0:6962314234 is in state 'finished'
[2026-01-12 22:01:32] 2026-01-12 20:51:55,551 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 22:01:32] 2026-01-12 20:51:56,115 | INFO     | time since job start (11912s) is within the limit (174528.0s)
[2026-01-12 22:01:32] 2026-01-12 20:51:56,115 | INFO     | 11912s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-12 22:01:32] 2026-01-12 20:51:56,385 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-12 22:01:32] 2026-01-12 20:51:56,396 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2865.8722031250004
[2026-01-12 22:01:32] 2026-01-12 20:51:56,407 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6962314234/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 22:01:32] 2026-01-12 20:51:56,408 | INFO     | extracted standard info from prmon json
[2026-01-12 22:01:32] 2026-01-12 20:51:56,408 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 22:01:32] 2026-01-12 20:51:56,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 22:01:32] 2026-01-12 20:51:56,409 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 22:01:32] 2026-01-12 20:51:56,409 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 22:01:32] 2026-01-12 20:51:56,412 | INFO     | fitting pss+swap vs Time
[2026-01-12 22:01:32] 2026-01-12 20:51:56,413 | INFO     | sum of square deviations: 2299168690.0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,414 | INFO     | sum of deviations: -46309422398.999985
[2026-01-12 22:01:32] 2026-01-12 20:51:56,414 | INFO     | mean x: 1768245146.0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,414 | INFO     | mean y: 2446681.825641026
[2026-01-12 22:01:32] 2026-01-12 20:51:56,414 | INFO     | intersect: 35618107127.81727
[2026-01-12 22:01:32] 2026-01-12 20:51:56,414 | INFO     | chi2: 1.6249175963906644
[2026-01-12 22:01:32] 2026-01-12 20:51:56,415 | INFO     | sum of square deviations: 2126802667.5
[2026-01-12 22:01:32] 2026-01-12 20:51:56,416 | INFO     | sum of deviations: -44617034464.500015
[2026-01-12 22:01:32] 2026-01-12 20:51:56,416 | INFO     | mean x: 1768244993.5
[2026-01-12 22:01:32] 2026-01-12 20:51:56,416 | INFO     | mean y: 2448179.9
[2026-01-12 22:01:32] 2026-01-12 20:51:56,416 | INFO     | intersect: 37097496546.28499
[2026-01-12 22:01:32] 2026-01-12 20:51:56,416 | INFO     | chi2: 1.6180990067351866
[2026-01-12 22:01:32] 2026-01-12 20:51:56,416 | INFO     | current chi2=1.6180990067351866 (change=0.4196267964986968 %)
[2026-01-12 22:01:32] 2026-01-12 20:51:56,417 | INFO     | right removable region: 189
[2026-01-12 22:01:32] 2026-01-12 20:51:56,417 | INFO     | sum of square deviations: 2126802667.5
[2026-01-12 22:01:32] 2026-01-12 20:51:56,418 | INFO     | sum of deviations: -65738622709.5
[2026-01-12 22:01:32] 2026-01-12 20:51:56,418 | INFO     | mean x: 1768245298.5
[2026-01-12 22:01:32] 2026-01-12 20:51:56,418 | INFO     | mean y: 2463537.3421052634
[2026-01-12 22:01:32] 2026-01-12 20:51:56,418 | INFO     | intersect: 54658220891.915146
[2026-01-12 22:01:32] 2026-01-12 20:51:56,418 | INFO     | chi2: 0.3950489554489465
[2026-01-12 22:01:32] 2026-01-12 20:51:56,419 | INFO     | current chi2=0.3950489554489465 (change=75.68806219303393 %)
[2026-01-12 22:01:32] 2026-01-12 20:51:56,419 | INFO     | sum of square deviations: 1963274020.0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,420 | INFO     | sum of deviations: -58345141896.0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,420 | INFO     | mean x: 1768245451.0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,420 | INFO     | mean y: 2456621.8378378376
[2026-01-12 22:01:32] 2026-01-12 20:51:56,420 | INFO     | intersect: 52551683420.831245
[2026-01-12 22:01:32] 2026-01-12 20:51:56,420 | INFO     | chi2: 0.38726016893651366
[2026-01-12 22:01:32] 2026-01-12 20:51:56,421 | INFO     | current chi2=0.38726016893651366 (change=1.9716003307948087 %)
[2026-01-12 22:01:32] 2026-01-12 20:51:56,421 | INFO     | left removable region: 20
[2026-01-12 22:01:32] 2026-01-12 20:51:56,421 | INFO     | sum of square deviations: 1496660620.0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,422 | INFO     | sum of deviations: -39036898638.000046
[2026-01-12 22:01:32] 2026-01-12 20:51:56,422 | INFO     | mean x: 1768245573.0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,422 | INFO     | mean y: 2440387.49704142
[2026-01-12 22:01:32] 2026-01-12 20:51:56,422 | INFO     | intersect: 46122998567.409134
[2026-01-12 22:01:32] 2026-01-12 20:51:56,422 | INFO     | chi2: 0.3374735373158837
[2026-01-12 22:01:32] 2026-01-12 20:51:56,423 | INFO     | current memory leak: -26.08 B/s (using 169 data points, chi2=0.34)
[2026-01-12 22:01:32] 2026-01-12 20:51:56,423 | INFO     | could have reported an average CPU frequency of 2822 MHz (10 samples)
[2026-01-12 22:01:32] 2026-01-12 20:51:56,423 | INFO     | ..............................
[2026-01-12 22:01:32] 2026-01-12 20:51:56,423 | INFO     | . Timing measurements:
[2026-01-12 22:01:32] 2026-01-12 20:51:56,423 | INFO     | . get job = 0 s
[2026-01-12 22:01:32] 2026-01-12 20:51:56,423 | INFO     | . initial setup = 1 s
[2026-01-12 22:01:32] 2026-01-12 20:51:56,423 | INFO     | . payload setup = 5 s
[2026-01-12 22:01:32] 2026-01-12 20:51:56,423 | INFO     | . stage-in = 0 s
[2026-01-12 22:01:32] 2026-01-12 20:51:56,424 | INFO     | . payload execution = 11875 s
[2026-01-12 22:01:32] 2026-01-12 20:51:56,424 | INFO     | . stage-out = 1 s
[2026-01-12 22:01:32] 2026-01-12 20:51:56,424 | INFO     | . log creation = 0 s
[2026-01-12 22:01:32] 2026-01-12 20:51:56,424 | INFO     | ..............................
[2026-01-12 22:01:32] 2026-01-12 20:51:56,512 | INFO     | 
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | job summary report
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | --------------------------------------------------
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | PanDA job id: 6962314234
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | task id: 47898826
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | errors: (none)
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | pilot state: finished 
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | transexitcode: 0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | exeerrorcode: 0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | exeerrordiag: 
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | exitcode: 0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | exitmsg: OK
[2026-01-12 22:01:32] 2026-01-12 20:51:56,513 | INFO     | cpuconsumptiontime: 45960 s
[2026-01-12 22:01:32] 2026-01-12 20:51:56,514 | INFO     | nevents: 400
[2026-01-12 22:01:32] 2026-01-12 20:51:56,514 | INFO     | neventsw: 0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,514 | INFO     | pid: 1524948
[2026-01-12 22:01:32] 2026-01-12 20:51:56,514 | INFO     | pgrp: 1524948
[2026-01-12 22:01:32] 2026-01-12 20:51:56,514 | INFO     | corecount: 4
[2026-01-12 22:01:32] 2026-01-12 20:51:56,514 | INFO     | event service: False
[2026-01-12 22:01:32] 2026-01-12 20:51:56,514 | INFO     | sizes: {0: 2283861, 1: 2284003, 5: 2284265, 11: 2284321, 11884: 2313891, 11885: 2322911, 11888: 2323095, 11897: 2323289}
[2026-01-12 22:01:32] 2026-01-12 20:51:56,514 | INFO     | --------------------------------------------------
[2026-01-12 22:01:32] 2026-01-12 20:51:56,514 | INFO     | 
[2026-01-12 22:01:32] 2026-01-12 20:51:56,515 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-01-12 22:01:32] 2026-01-12 20:51:56,536 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,536 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,536 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,536 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 22:01:32] 2026-01-12 20:51:56,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,538 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 22:01:32] 2026-01-12 20:51:56,538 | INFO     | job 6962314234 has completed (purged errors)
[2026-01-12 22:01:32] 2026-01-12 20:51:56,538 | INFO     | overall cleanup function is called
[2026-01-12 22:01:32] 2026-01-12 20:51:57,546 | INFO     | --- collectZombieJob: --- 10, [1524948]
[2026-01-12 22:01:32] 2026-01-12 20:51:57,546 | INFO     | zombie collector waiting for pid 1524948
[2026-01-12 22:01:32] 2026-01-12 20:51:57,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 22:01:32] 2026-01-12 20:51:57,546 | INFO     | collected zombie processes
[2026-01-12 22:01:32] 2026-01-12 20:51:57,546 | INFO     | will attempt to kill all subprocesses of pid=1524948
[2026-01-12 22:01:32] 2026-01-12 20:51:57,876 | INFO     | process IDs to be killed: [1524948] (in reverse order)
[2026-01-12 22:01:32] 2026-01-12 20:51:57,971 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 22:01:32] 2026-01-12 20:51:57,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 22:01:32] 2026-01-12 20:51:57,983 | INFO     | did not find any defunct processes belonging to 1524948
[2026-01-12 22:01:32] 2026-01-12 20:51:57,994 | INFO     | did not find any defunct processes belonging to 1524948
[2026-01-12 22:01:32] 2026-01-12 20:51:57,994 | INFO     | ready for new job
[2026-01-12 22:01:32] 2026-01-12 20:51:57,994 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 22:01:32] 2026-01-12 20:51:57,996 | INFO     | ***************************************
[2026-01-12 22:01:32] 2026-01-12 20:51:57,996 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 22:01:32] 2026-01-12 20:51:57,996 | INFO     | ***************************************
[2026-01-12 22:01:32] 2026-01-12 20:51:57,996 | INFO     | 
[2026-01-12 22:01:32] 2026-01-12 20:51:58,000 | INFO     | architecture information:
[2026-01-12 22:01:32] 2026-01-12 20:51:58,001 | INFO     | executing command: cat /etc/os-release
[2026-01-12 22:01:32] 2026-01-12 20:51:58,015 | INFO     | cat /etc/os-release:
[2026-01-12 22:01:32] NAME="CentOS Linux"
[2026-01-12 22:01:32] VERSION="7 (Core)"
[2026-01-12 22:01:32] ID="centos"
[2026-01-12 22:01:32] ID_LIKE="rhel fedora"
[2026-01-12 22:01:32] VERSION_ID="7"
[2026-01-12 22:01:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 22:01:32] ANSI_COLOR="0;31"
[2026-01-12 22:01:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 22:01:32] HOME_URL="https://www.centos.org/"
[2026-01-12 22:01:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 22:01:32] 
[2026-01-12 22:01:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 22:01:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 22:01:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 22:01:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 22:01:32] 
[2026-01-12 22:01:32] 2026-01-12 20:51:58,015 | INFO     | ***************************************
[2026-01-12 22:01:32] 2026-01-12 20:51:58,518 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-01-12 22:01:32] 2026-01-12 20:51:58,532 | INFO     | sufficient remaining disk space (705676967936 B)
[2026-01-12 22:01:32] 2026-01-12 20:51:58,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 22:01:32] 2026-01-12 20:51:58,533 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 22:01:32] 2026-01-12 20:51:58,533 | INFO     | update_server=False
[2026-01-12 22:01:32] 2026-01-12 20:51:58,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 22:01:32] 2026-01-12 20:51:58,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 22:01:32] 2026-01-12 20:51:58,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 22:01:32] 2026-01-12 20:51:58,554 | INFO     | all payload control threads have been joined
[2026-01-12 22:01:32] 2026-01-12 20:51:59,001 | INFO     | all data control threads have been joined
[2026-01-12 22:01:32] 2026-01-12 20:51:59,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:01:32] 2026-01-12 20:51:59,059 | INFO     | aborting loop
[2026-01-12 22:01:32] 2026-01-12 20:51:59,536 | INFO     | [payload] validate_post thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:51:59,538 | INFO     | [job] retrieve thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:51:59,559 | INFO     | [payload] control thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:51:59,615 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:51:59,617 | INFO     | all job control threads have been joined
[2026-01-12 22:01:32] 2026-01-12 20:52:00,006 | INFO     | [data] control thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:00,020 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:00,064 | INFO     | [job] job monitor thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:00,539 | INFO     | [data] copytool_out thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:00,546 | INFO     | [payload] failed_post thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:00,622 | INFO     | [job] control thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:00,836 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:00,866 | INFO     | [data] copytool_in thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:01,017 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:01,031 | INFO     | [job] validate thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:01,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:01:32] 2026-01-12 20:52:02,528 | INFO     | [job] queue monitor thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:02,538 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 22:01:32] 2026-01-12 20:52:29,617 | INFO     | PID=1518007 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 22:01:32] 2026-01-12 20:52:29,617 | INFO     | .. there are 2 such processes running
[2026-01-12 22:01:32] 2026-01-12 20:52:29,618 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 22:01:32] 2026-01-12 20:52:29,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 22:01:32] 2026-01-12 20:52:29,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 22:01:32] 2026-01-12 20:52:41,822 | INFO     | [monitor] cgroup control has ended
[2026-01-12 22:01:32] 2026-01-12 20:52:42,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22772316550976)>', '<ExcThread(monitor, started 22772078049024)>']
[2026-01-12 22:01:32] 2026-01-12 20:52:42,676 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 22:01:32] 2026-01-12 20:52:42,676 | INFO     | [monitor] control thread has ended
[2026-01-12 22:01:32] 2026-01-12 20:52:47,174 | INFO     | all workflow threads have been joined
[2026-01-12 22:01:32] 2026-01-12 20:52:47,174 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 22:01:32] 2026-01-12 20:52:47,174 | INFO     | traces error code: 0
[2026-01-12 22:01:32] 2026-01-12 20:52:47,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 22:01:32] 2026-01-12 20:52:47,319 [wrapper] ==== pilot stdout END ====
[2026-01-12 22:01:32] 2026-01-12 20:52:47,321 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 22:01:32] 2026-01-12 20:52:47,324 [wrapper] pilotpid: 1518007
[2026-01-12 22:01:32] 2026-01-12 20:52:47,327 [wrapper] Pilot exit status: 0
[2026-01-12 22:01:32] 2026-01-12 20:52:47,337 [wrapper] pandaids: 6962314234
[2026-01-12 22:01:32] 2026-01-12 20:52:47,403 [wrapper] cleanup supervisor_pilot 1630520 1518008
[2026-01-12 22:01:32] 2026-01-12 20:52:47,405 [wrapper] Test setup, not cleaning
[2026-01-12 22:01:32] 2026-01-12 20:52:47,408 [wrapper] apfmon messages muted
[2026-01-12 22:01:32] 2026-01-12 20:52:47,411 [wrapper] ==== wrapper stdout END ====
[2026-01-12 22:01:32] 2026-01-12 20:52:47,413 [wrapper] ==== wrapper stderr END ====
[2026-01-12 22:01:32]  *** Error codes and diagnostics ***
[2026-01-12 22:01:32]     "exeErrorCode": 0,
[2026-01-12 22:01:32]     "exeErrorDiag": "",
[2026-01-12 22:01:32]     "pilotErrorCode": 0,
[2026-01-12 22:01:32]     "pilotErrorDiag": "",
[2026-01-12 22:01:32]  *** Listing of results directory ***
[2026-01-12 22:01:32] total 445300
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc    579449 Jan  7 21:49 pilot3.tar.gz
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc      5112 Jan  7 21:53 queuedata.json
[2026-01-12 22:01:32] -rwx------ 1 boinc boinc     36322 Jan  7 21:53 runpilot2-wrapper.sh
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc       100 Jan 12 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 22:01:32] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 18:33 run_atlas
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc       105 Jan 12 18:33 job.xml
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc      6636 Jan 12 18:33 init_data.xml
[2026-01-12 22:01:32] -rw-r--r-- 2 boinc boinc 224707570 Jan 12 18:33 EVNT.47898824._000271.pool.root.1
[2026-01-12 22:01:32] drwxrwx--x 2 boinc boinc      4096 Jan 12 18:33 shared
[2026-01-12 22:01:32] -rw-r--r-- 2 boinc boinc    592394 Jan 12 18:33 input.tar.gz
[2026-01-12 22:01:32] -rw-r--r-- 2 boinc boinc     15847 Jan 12 18:33 start_atlas.sh
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc         0 Jan 12 18:33 boinc_lockfile
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc      2516 Jan 12 18:33 pandaJob.out
[2026-01-12 22:01:32] -rw------- 1 boinc boinc    988539 Jan 12 18:33 agis_schedconf.cvmfs.json
[2026-01-12 22:01:32] drwx------ 5 boinc boinc      4096 Jan 12 18:33 pilot3
[2026-01-12 22:01:32] -rw------- 1 boinc boinc 223243839 Jan 12 21:51 HITS.47898826._011072.pool.root.1
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc       528 Jan 12 21:51 boinc_task_state.xml
[2026-01-12 22:01:32] -rw------- 1 boinc boinc      1028 Jan 12 21:51 memory_monitor_summary.json
[2026-01-12 22:01:32] -rw------- 1 boinc boinc   1516240 Jan 12 21:51 agis_ddmendpoints.agis.ALL.json
[2026-01-12 22:01:32] -rw------- 1 boinc boinc    367691 Jan 12 21:51 log.47898826._011072.job.log.tgz.1
[2026-01-12 22:01:32] -rw------- 1 boinc boinc        95 Jan 12 21:51 pilot_heartbeat.json
[2026-01-12 22:01:32] -rw------- 1 boinc boinc      7825 Jan 12 21:51 heartbeat.json
[2026-01-12 22:01:32] -rw------- 1 boinc boinc      4833 Jan 12 21:52 pilotlog.txt
[2026-01-12 22:01:32] -rw------- 1 boinc boinc   1691759 Jan 12 21:52 log.47898826._011072.job.log.1
[2026-01-12 22:01:32] -rw------- 1 boinc boinc       357 Jan 12 21:52 output.list
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc       620 Jan 12 21:52 runtime_log
[2026-01-12 22:01:32] -rw------- 1 boinc boinc   2078720 Jan 12 21:52 result.tar.gz
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc      9206 Jan 12 21:52 runtime_log.err
[2026-01-12 22:01:32] -rw------- 1 boinc boinc       665 Jan 12 21:52 ceDODmbipx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMRdKDmmeuYFo.diag
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc        27 Jan 12 22:01 wrapper_checkpoint.txt
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc      8192 Jan 12 22:01 boinc_mmap_file
[2026-01-12 22:01:32] -rw-r--r-- 1 boinc boinc     21208 Jan 12 22:01 stderr.txt
[2026-01-12 22:01:32] HITS file was successfully produced:
[2026-01-12 22:01:32] -rw------- 1 boinc boinc 223243839 Jan 12 21:51 shared/HITS.pool.root.1
[2026-01-12 22:01:32]  *** Contents of shared directory: ***
[2026-01-12 22:01:32] total 440092
[2026-01-12 22:01:32] -rw-r--r-- 2 boinc boinc 224707570 Jan 12 18:33 ATLAS.root_0
[2026-01-12 22:01:32] -rw-r--r-- 2 boinc boinc    592394 Jan 12 18:33 input.tar.gz
[2026-01-12 22:01:32] -rw-r--r-- 2 boinc boinc     15847 Jan 12 18:33 start_atlas.sh
[2026-01-12 22:01:32] -rw------- 1 boinc boinc 223243839 Jan 12 21:51 HITS.pool.root.1
[2026-01-12 22:01:32] -rw------- 1 boinc boinc   2078720 Jan 12 21:52 result.tar.gz
22:01:34 (1513831): run_atlas exited; CPU time 46451.089718
22:01:34 (1513831): called boinc_finish(0)

</stderr_txt>
]]>

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