Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:58:41 (3776554): wrapper (7.7.26015): starting
19:58:41 (3776554): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 19:58:41] Arguments: --nthreads 8
[2026-01-07 19:58:41] Threads: 8
[2026-01-07 19:58:41] Checking for CVMFS
[2026-01-07 19:58:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 19:58:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 19:58:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 19:59:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 19:59:03] 2.13.3.0 6048 91147 343176 154885 2 265 23668231 25181184 18494 16776704 0 554333996 99.619 508728014 27720 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-07 19:59:03] CVMFS is ok
[2026-01-07 19:59:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 19:59:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 19:59:03] Further information can be found at the LHC@home message board.
[2026-01-07 19:59:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 19:59:03] Checking for apptainer binary...
[2026-01-07 19:59:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 19:59:03] Running /usr/bin/apptainer --version
[2026-01-07 19:59:03] apptainer version 1.4.5-2.el9
[2026-01-07 19:59:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 19:59:05] c-16-35.aglt2.org
[2026-01-07 19:59:05] apptainer works
[2026-01-07 19:59:05] Set ATHENA_PROC_NUMBER=8
[2026-01-07 19:59:05] Set ATHENA_CORE_NUMBER=8
[2026-01-07 19:59:05] Starting ATLAS job with PandaID=6962016329
[2026-01-07 19:59:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 10:44:07]  *** The last 200 lines of the pilot log: ***
[2026-01-08 10:44:07] 2026-01-08 15:43:00,667 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962016329/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 10:44:07] 2026-01-08 15:43:00,669 | INFO     | extracted standard info from prmon json
[2026-01-08 10:44:07] 2026-01-08 15:43:00,670 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 10:44:07] 2026-01-08 15:43:00,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 10:44:07] 2026-01-08 15:43:00,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 10:44:07] 2026-01-08 15:43:00,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 10:44:07] 2026-01-08 15:43:00,689 | INFO     | fitting pss+swap vs Time
[2026-01-08 10:44:07] 2026-01-08 15:43:00,690 | INFO     | sum of square deviations: 200691926088.13425
[2026-01-08 10:44:07] 2026-01-08 15:43:00,720 | INFO     | sum of deviations: 232464990742.0173
[2026-01-08 10:44:07] 2026-01-08 15:43:00,720 | INFO     | mean x: 1767860538.6277456
[2026-01-08 10:44:07] 2026-01-08 15:43:00,721 | INFO     | mean y: 2514877.6242774567
[2026-01-08 10:44:07] 2026-01-08 15:43:00,721 | INFO     | intersect: -2045229103.6896508
[2026-01-08 10:44:07] 2026-01-08 15:43:00,722 | INFO     | chi2: 3.7784464929819452
[2026-01-08 10:44:07] 2026-01-08 15:43:00,724 | INFO     | sum of square deviations: 197231884330.67352
[2026-01-08 10:44:07] 2026-01-08 15:43:00,754 | INFO     | sum of deviations: 344049383749.01746
[2026-01-08 10:44:07] 2026-01-08 15:43:00,754 | INFO     | mean x: 1767860386.1290698
[2026-01-08 10:44:07] 2026-01-08 15:43:00,754 | INFO     | mean y: 2519778.4593023257
[2026-01-08 10:44:07] 2026-01-08 15:43:00,755 | INFO     | intersect: -3081318711.7832932
[2026-01-08 10:44:07] 2026-01-08 15:43:00,756 | INFO     | chi2: 2.3276802172416975
[2026-01-08 10:44:07] 2026-01-08 15:43:00,756 | INFO     | current chi2=2.3276802172416975 (change=38.395840153748075 %)
[2026-01-08 10:44:07] 2026-01-08 15:43:00,757 | INFO     | sum of square deviations: 193811790985.4694
[2026-01-08 10:44:07] 2026-01-08 15:43:00,780 | INFO     | sum of deviations: 341886070803.258
[2026-01-08 10:44:07] 2026-01-08 15:43:00,780 | INFO     | mean x: 1767860233.6292398
[2026-01-08 10:44:07] 2026-01-08 15:43:00,780 | INFO     | mean y: 2519681.9976608185
[2026-01-08 10:44:07] 2026-01-08 15:43:00,780 | INFO     | intersect: -3116004665.420111
[2026-01-08 10:44:07] 2026-01-08 15:43:00,782 | INFO     | chi2: 2.32760544674261
[2026-01-08 10:44:07] 2026-01-08 15:43:00,782 | INFO     | current chi2=2.32760544674261 (change=0.003212232442132102 %)
[2026-01-08 10:44:07] 2026-01-08 15:43:00,782 | INFO     | right removable region: 854
[2026-01-08 10:44:07] 2026-01-08 15:43:00,783 | INFO     | sum of square deviations: 197231658386.15143
[2026-01-08 10:44:07] 2026-01-08 15:43:00,824 | INFO     | sum of deviations: 32514964755.30696
[2026-01-08 10:44:07] 2026-01-08 15:43:00,825 | INFO     | mean x: 1767860691.1313953
[2026-01-08 10:44:07] 2026-01-08 15:43:00,825 | INFO     | mean y: 2523675.9441860467
[2026-01-08 10:44:07] 2026-01-08 15:43:00,825 | INFO     | intersect: -288920043.2577715
[2026-01-08 10:44:07] 2026-01-08 15:43:00,826 | INFO     | chi2: 1.5232236571943032
[2026-01-08 10:44:07] 2026-01-08 15:43:00,827 | INFO     | current chi2=1.5232236571943032 (change=59.68650978587296 %)
[2026-01-08 10:44:07] 2026-01-08 15:43:00,828 | INFO     | sum of square deviations: 193811391434.1474
[2026-01-08 10:44:07] 2026-01-08 15:43:00,853 | INFO     | sum of deviations: 9927959707.354324
[2026-01-08 10:44:07] 2026-01-08 15:43:00,853 | INFO     | mean x: 1767860843.6350877
[2026-01-08 10:44:07] 2026-01-08 15:43:00,853 | INFO     | mean y: 2524681.4081871347
[2026-01-08 10:44:07] 2026-01-08 15:43:00,854 | INFO     | intersect: -88033727.43426773
[2026-01-08 10:44:07] 2026-01-08 15:43:00,855 | INFO     | chi2: 1.493847743018435
[2026-01-08 10:44:07] 2026-01-08 15:43:00,855 | INFO     | current chi2=1.493847743018435 (change=1.9285358415439224 %)
[2026-01-08 10:44:07] 2026-01-08 15:43:00,855 | INFO     | left removable region: 20
[2026-01-08 10:44:07] 2026-01-08 15:43:00,856 | INFO     | sum of square deviations: 179878456427.8654
[2026-01-08 10:44:07] 2026-01-08 15:43:00,893 | INFO     | sum of deviations: 89047332604.26605
[2026-01-08 10:44:07] 2026-01-08 15:43:00,893 | INFO     | mean x: 1767860813.1390886
[2026-01-08 10:44:07] 2026-01-08 15:43:00,893 | INFO     | mean y: 2531112.9028776977
[2026-01-08 10:44:07] 2026-01-08 15:43:00,893 | INFO     | intersect: -872633667.5374877
[2026-01-08 10:44:07] 2026-01-08 15:43:00,911 | INFO     | chi2: 0.009922035294054308
[2026-01-08 10:44:07] 2026-01-08 15:43:00,911 | INFO     | current memory leak: 0.50 B/s (using 834 data points, chi2=0.01)
[2026-01-08 10:44:07] 2026-01-08 15:43:00,912 | INFO     | could have reported an average CPU frequency of 2712 MHz (32 samples)
[2026-01-08 10:44:07] 2026-01-08 15:43:00,912 | INFO     | ..............................
[2026-01-08 10:44:07] 2026-01-08 15:43:00,912 | INFO     | . Timing measurements:
[2026-01-08 10:44:07] 2026-01-08 15:43:00,913 | INFO     | . get job = 0 s
[2026-01-08 10:44:07] 2026-01-08 15:43:00,913 | INFO     | . initial setup = 5 s
[2026-01-08 10:44:07] 2026-01-08 15:43:00,913 | INFO     | . payload setup = 48 s
[2026-01-08 10:44:07] 2026-01-08 15:43:00,913 | INFO     | . stage-in = 0 s
[2026-01-08 10:44:07] 2026-01-08 15:43:00,913 | INFO     | . payload execution = 52777 s
[2026-01-08 10:44:07] 2026-01-08 15:43:00,913 | INFO     | . stage-out = 6 s
[2026-01-08 10:44:07] 2026-01-08 15:43:00,913 | INFO     | . log creation = 0 s
[2026-01-08 10:44:07] 2026-01-08 15:43:00,913 | INFO     | ..............................
[2026-01-08 10:44:07] 2026-01-08 15:43:01,582 | INFO     | 
[2026-01-08 10:44:07] 2026-01-08 15:43:01,583 | INFO     | job summary report
[2026-01-08 10:44:07] 2026-01-08 15:43:01,583 | INFO     | --------------------------------------------------
[2026-01-08 10:44:07] 2026-01-08 15:43:01,583 | INFO     | PanDA job id: 6962016329
[2026-01-08 10:44:07] 2026-01-08 15:43:01,583 | INFO     | task id: 47898826
[2026-01-08 10:44:07] 2026-01-08 15:43:01,583 | INFO     | errors: (none)
[2026-01-08 10:44:07] 2026-01-08 15:43:01,583 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 10:44:07] 2026-01-08 15:43:01,583 | INFO     | pilot state: finished 
[2026-01-08 10:44:07] 2026-01-08 15:43:01,583 | INFO     | transexitcode: 0
[2026-01-08 10:44:07] 2026-01-08 15:43:01,583 | INFO     | exeerrorcode: 0
[2026-01-08 10:44:07] 2026-01-08 15:43:01,583 | INFO     | exeerrordiag: 
[2026-01-08 10:44:07] 2026-01-08 15:43:01,584 | INFO     | exitcode: 0
[2026-01-08 10:44:07] 2026-01-08 15:43:01,584 | INFO     | exitmsg: OK
[2026-01-08 10:44:07] 2026-01-08 15:43:01,584 | INFO     | cpuconsumptiontime: 75388 s
[2026-01-08 10:44:07] 2026-01-08 15:43:01,584 | INFO     | nevents: 400
[2026-01-08 10:44:07] 2026-01-08 15:43:01,584 | INFO     | neventsw: 0
[2026-01-08 10:44:07] 2026-01-08 15:43:01,584 | INFO     | pid: 3797031
[2026-01-08 10:44:07] 2026-01-08 15:43:01,584 | INFO     | pgrp: 3797031
[2026-01-08 10:44:07] 2026-01-08 15:43:01,584 | INFO     | corecount: 8
[2026-01-08 10:44:07] 2026-01-08 15:43:01,584 | INFO     | event service: False
[2026-01-08 10:44:07] 2026-01-08 15:43:01,584 | INFO     | sizes: {0: 2283136, 1: 2283821, 2: 2284020, 3: 2284048, 14: 2284048, 25: 2284076, 37: 2284232, 40: 2284522, 48: 2284550, 52830: 2332142, 52832: 2332141, 52839: 234
[2026-01-08 10:44:07] 2026-01-08 15:43:01,585 | INFO     | --------------------------------------------------
[2026-01-08 10:44:07] 2026-01-08 15:43:01,585 | INFO     | 
[2026-01-08 10:44:07] 2026-01-08 15:43:01,585 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 10:44:07] 2026-01-08 15:43:01,968 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,969 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,969 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,969 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,969 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,969 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,970 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,971 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 10:44:07] 2026-01-08 15:43:01,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,971 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 10:44:07] 2026-01-08 15:43:01,971 | INFO     | job 6962016329 has completed (purged errors)
[2026-01-08 10:44:07] 2026-01-08 15:43:01,971 | INFO     | overall cleanup function is called
[2026-01-08 10:44:07] 2026-01-08 15:43:02,458 | INFO     | PID=3783932 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 10:44:07] 2026-01-08 15:43:02,458 | INFO     | .. there are 35 such processes running
[2026-01-08 10:44:07] 2026-01-08 15:43:03,059 | INFO     | --- collectZombieJob: --- 10, [3797031]
[2026-01-08 10:44:07] 2026-01-08 15:43:03,059 | INFO     | zombie collector waiting for pid 3797031
[2026-01-08 10:44:07] 2026-01-08 15:43:03,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 10:44:07] 2026-01-08 15:43:03,060 | INFO     | collected zombie processes
[2026-01-08 10:44:07] 2026-01-08 15:43:03,060 | INFO     | will attempt to kill all subprocesses of pid=3797031
[2026-01-08 10:44:07] 2026-01-08 15:43:04,535 | INFO     | process IDs to be killed: [3797031] (in reverse order)
[2026-01-08 10:44:07] 2026-01-08 15:43:04,762 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 10:44:07] 2026-01-08 15:43:04,762 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 10:44:07] 2026-01-08 15:43:04,914 | INFO     | did not find any defunct processes belonging to 3797031
[2026-01-08 10:44:07] 2026-01-08 15:43:05,092 | INFO     | did not find any defunct processes belonging to 3797031
[2026-01-08 10:44:07] 2026-01-08 15:43:05,092 | INFO     | ready for new job
[2026-01-08 10:44:07] 2026-01-08 15:43:05,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 10:44:07] 2026-01-08 15:43:05,120 | INFO     | ***************************************
[2026-01-08 10:44:07] 2026-01-08 15:43:05,166 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 10:44:07] 2026-01-08 15:43:05,166 | INFO     | ***************************************
[2026-01-08 10:44:07] 2026-01-08 15:43:05,167 | INFO     | 
[2026-01-08 10:44:07] 2026-01-08 15:43:05,169 | INFO     | architecture information:
[2026-01-08 10:44:07] 2026-01-08 15:43:05,209 | INFO     | executing command: cat /etc/os-release
[2026-01-08 10:44:07] 2026-01-08 15:43:05,384 | INFO     | cat /etc/os-release:
[2026-01-08 10:44:07] NAME="CentOS Linux"
[2026-01-08 10:44:07] VERSION="7 (Core)"
[2026-01-08 10:44:07] ID="centos"
[2026-01-08 10:44:07] ID_LIKE="rhel fedora"
[2026-01-08 10:44:07] VERSION_ID="7"
[2026-01-08 10:44:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 10:44:07] ANSI_COLOR="0;31"
[2026-01-08 10:44:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 10:44:07] HOME_URL="https://www.centos.org/"
[2026-01-08 10:44:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 10:44:07] 
[2026-01-08 10:44:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 10:44:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 10:44:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 10:44:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 10:44:07] 
[2026-01-08 10:44:07] 2026-01-08 15:43:05,385 | INFO     | ***************************************
[2026-01-08 10:44:07] 2026-01-08 15:43:05,888 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 10:44:07] 2026-01-08 15:43:05,962 | INFO     | sufficient remaining disk space (63123226624 B)
[2026-01-08 10:44:07] 2026-01-08 15:43:05,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 10:44:07] 2026-01-08 15:43:05,977 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 10:44:07] 2026-01-08 15:43:05,978 | INFO     | update_server=False
[2026-01-08 10:44:07] 2026-01-08 15:43:05,978 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 10:44:07] 2026-01-08 15:43:06,005 | INFO     | all payload control threads have been joined
[2026-01-08 10:44:07] 2026-01-08 15:43:06,365 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 10:44:07] 2026-01-08 15:43:06,365 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 10:44:07] 2026-01-08 15:43:06,366 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 10:44:07] 2026-01-08 15:43:06,366 | INFO     | will abort loop
[2026-01-08 10:44:07] 2026-01-08 15:43:06,383 | INFO     | all data control threads have been joined
[2026-01-08 10:44:07] 2026-01-08 15:43:06,422 | INFO     | all job control threads have been joined
[2026-01-08 10:44:07] 2026-01-08 15:43:06,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 10:44:07] 2026-01-08 15:43:06,984 | INFO     | [job] retrieve thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:07,011 | INFO     | [payload] control thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:07,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 10:44:07] 2026-01-08 15:43:07,169 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:07,173 | INFO     | [job] validate thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:07,372 | INFO     | [job] job monitor thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:07,389 | INFO     | [data] control thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:07,428 | INFO     | [job] control thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:07,488 | INFO     | [payload] failed_post thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:07,542 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:07,615 | INFO     | [job] queue monitor thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:08,052 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:08,089 | INFO     | [data] copytool_in thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:08,209 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:08,543 | INFO     | [payload] validate_post thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:09,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 10:44:07] 2026-01-08 15:43:09,186 | INFO     | [data] copytool_out thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:13,095 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 10:44:07] 2026-01-08 15:43:37,781 | INFO     | PID=3783932 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 10:44:07] 2026-01-08 15:43:37,782 | INFO     | .. there are 35 such processes running
[2026-01-08 10:44:07] 2026-01-08 15:43:37,782 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 10:44:07] 2026-01-08 15:43:37,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 10:44:07] 2026-01-08 15:43:37,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 10:44:07] 2026-01-08 15:43:58,127 | INFO     | [monitor] cgroup control has ended
[2026-01-08 10:44:07] 2026-01-08 15:43:59,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139961930692416)>', '<ExcThread(monitor, started 139961657431808)>']
[2026-01-08 10:44:07] 2026-01-08 15:43:59,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 10:44:07] 2026-01-08 15:43:59,931 | INFO     | [monitor] control thread has ended
[2026-01-08 10:44:07] 2026-01-08 15:44:04,619 | INFO     | all workflow threads have been joined
[2026-01-08 10:44:07] 2026-01-08 15:44:04,619 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 10:44:07] 2026-01-08 15:44:04,621 | INFO     | traces error code: 0
[2026-01-08 10:44:07] 2026-01-08 15:44:04,621 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 10:44:07] 2026-01-08 15:44:06,389 [wrapper] ==== pilot stdout END ====
[2026-01-08 10:44:07] 2026-01-08 15:44:06,593 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 10:44:07] 2026-01-08 15:44:06,615 [wrapper] pilotpid: 3783932
[2026-01-08 10:44:07] 2026-01-08 15:44:06,668 [wrapper] Pilot exit status: 0
[2026-01-08 10:44:07] 2026-01-08 15:44:06,886 [wrapper] pandaids: 6962016329
[2026-01-08 10:44:07] 2026-01-08 15:44:06,989 [wrapper] cleanup supervisor_pilot  175287 3783933
[2026-01-08 10:44:07] 2026-01-08 15:44:07,010 [wrapper] Test setup, not cleaning
[2026-01-08 10:44:07] 2026-01-08 15:44:07,013 [wrapper] apfmon messages muted
[2026-01-08 10:44:07] 2026-01-08 15:44:07,016 [wrapper] ==== wrapper stdout END ====
[2026-01-08 10:44:07] 2026-01-08 15:44:07,019 [wrapper] ==== wrapper stderr END ====
[2026-01-08 10:44:07]  *** Error codes and diagnostics ***
[2026-01-08 10:44:07]     "exeErrorCode": 0,
[2026-01-08 10:44:07]     "exeErrorDiag": "",
[2026-01-08 10:44:07]     "pilotErrorCode": 0,
[2026-01-08 10:44:07]     "pilotErrorDiag": "",
[2026-01-08 10:44:07]  *** Listing of results directory ***
[2026-01-08 10:44:07] total 455132
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas    597923 Jan  7 08:01 pilot3.tar.gz
[2026-01-08 10:44:07] -rwx------. 1 boincer umatlas     36322 Jan  7 10:32 runpilot2-wrapper.sh
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 10:33 queuedata.json
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas       100 Jan  7 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 10:44:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 19:58 run_atlas
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas       105 Jan  7 19:58 job.xml
[2026-01-08 10:44:07] -rw-r--r--. 2 boincer umatlas 223788233 Jan  7 19:58 EVNT.47898824._000412.pool.root.1
[2026-01-08 10:44:07] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 19:58 start_atlas.sh
[2026-01-08 10:44:07] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 19:58 shared
[2026-01-08 10:44:07] -rw-r--r--. 2 boincer umatlas    610537 Jan  7 19:58 input.tar.gz
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas         0 Jan  7 19:58 boinc_lockfile
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas      2516 Jan  7 19:59 pandaJob.out
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas        57 Jan  7 19:59 setup.sh.local
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas    989777 Jan  7 20:00 agis_schedconf.cvmfs.json
[2026-01-08 10:44:07] drwx------. 7 boincer umatlas      4096 Jan  7 20:00 pilot3
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas      6612 Jan  8 10:39 init_data.xml
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas 224481291 Jan  8 10:40 HITS.47898826._009122.pool.root.1
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas       531 Jan  8 10:40 boinc_task_state.xml
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas      1058 Jan  8 10:42 memory_monitor_summary.json
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas   1516240 Jan  8 10:42 agis_ddmendpoints.agis.ALL.json
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas    918154 Jan  8 10:42 log.47898826._009122.job.log.tgz.1
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas        95 Jan  8 10:42 pilot_heartbeat.json
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas      7823 Jan  8 10:43 heartbeat.json
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas      5010 Jan  8 10:44 pilotlog.txt
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 10:44 boinc_mmap_file
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas        28 Jan  8 10:44 wrapper_checkpoint.txt
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas   5997332 Jan  8 10:44 log.47898826._009122.job.log.1
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas       357 Jan  8 10:44 output.list
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas       620 Jan  8 10:44 runtime_log
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas   6932480 Jan  8 10:44 result.tar.gz
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas      9338 Jan  8 10:44 runtime_log.err
[2026-01-08 10:44:07] -rw-------. 1 boincer umatlas       657 Jan  8 10:44 dsoLDmShkx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0HiKDm5PR6Cn.diag
[2026-01-08 10:44:07] -rw-r--r--. 1 boincer umatlas     21306 Jan  8 10:44 stderr.txt
[2026-01-08 10:44:08] HITS file was successfully produced:
[2026-01-08 10:44:08] -rw-------. 1 boincer umatlas 224481291 Jan  8 10:40 shared/HITS.pool.root.1
[2026-01-08 10:44:08]  *** Contents of shared directory: ***
[2026-01-08 10:44:08] total 445160
[2026-01-08 10:44:08] -rw-r--r--. 2 boincer umatlas 223788233 Jan  7 19:58 ATLAS.root_0
[2026-01-08 10:44:08] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 19:58 start_atlas.sh
[2026-01-08 10:44:08] -rw-r--r--. 2 boincer umatlas    610537 Jan  7 19:58 input.tar.gz
[2026-01-08 10:44:08] -rw-------. 1 boincer umatlas 224481291 Jan  8 10:40 HITS.pool.root.1
[2026-01-08 10:44:08] -rw-------. 1 boincer umatlas   6932480 Jan  8 10:44 result.tar.gz
10:44:09 (3776554): run_atlas exited; CPU time 77994.617575
10:44:09 (3776554): called boinc_finish(0)

</stderr_txt>
]]>

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