Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:31:55 (29943): wrapper (7.7.26015): starting
12:31:55 (29943): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 12:31:55] Arguments: --nthreads 8
[2026-01-07 12:31:55] Threads: 8
[2026-01-07 12:31:55] Checking for CVMFS
[2026-01-07 12:31:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 12:31:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 12:31:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 12:31:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 12:31:56] 2.11.2.0 12825 178443 134060 154875 1 58 10453156 18432001 34 130560 0 115613764 99.980 6635562 26106 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-07 12:31:56] CVMFS is ok
[2026-01-07 12:31:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 12:31:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 12:31:56] Further information can be found at the LHC@home message board.
[2026-01-07 12:31:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 12:31:56] Checking for apptainer binary...
[2026-01-07 12:31:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 12:31:56] Running /usr/bin/apptainer --version
[2026-01-07 12:31:56] apptainer version 1.3.2-1.el7
[2026-01-07 12:31:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 12:31:56] c-206-8.aglt2.org
[2026-01-07 12:31:56] apptainer works
[2026-01-07 12:31:56] Set ATHENA_PROC_NUMBER=8
[2026-01-07 12:31:56] Set ATHENA_CORE_NUMBER=8
[2026-01-07 12:31:56] Starting ATLAS job with PandaID=6962016643
[2026-01-07 12:31:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-07 15:43:31]  *** The last 200 lines of the pilot log: ***
[2026-01-07 15:43:31] 2026-01-07 20:42:38,173 | INFO     | PID=4450 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-07 15:43:31] 2026-01-07 20:42:38,173 | INFO     | .. there are 2 such processes running
[2026-01-07 15:43:31] 2026-01-07 20:42:38,642 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-07 15:43:31] 2026-01-07 20:42:38,646 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2039.7083333333333
[2026-01-07 15:43:31] 2026-01-07 20:42:38,649 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962016643/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 15:43:31] 2026-01-07 20:42:38,650 | INFO     | extracted standard info from prmon json
[2026-01-07 15:43:31] 2026-01-07 20:42:38,650 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 15:43:31] 2026-01-07 20:42:38,650 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 15:43:31] 2026-01-07 20:42:38,651 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 15:43:31] 2026-01-07 20:42:38,651 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 15:43:31] 2026-01-07 20:42:38,654 | INFO     | fitting pss+swap vs Time
[2026-01-07 15:43:31] 2026-01-07 20:42:38,654 | INFO     | sum of square deviations: 2027639878.0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,655 | INFO     | sum of deviations: 18843267159.000004
[2026-01-07 15:43:31] 2026-01-07 20:42:38,655 | INFO     | mean x: 1767812829.0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,655 | INFO     | mean y: 2502980.5401069517
[2026-01-07 15:43:31] 2026-01-07 20:42:38,656 | INFO     | intersect: -16426138902.757174
[2026-01-07 15:43:31] 2026-01-07 20:42:38,656 | INFO     | chi2: 1.6293876811914858
[2026-01-07 15:43:31] 2026-01-07 20:42:38,656 | INFO     | sum of square deviations: 1869302025.5
[2026-01-07 15:43:31] 2026-01-07 20:42:38,657 | INFO     | sum of deviations: 18396485773.999996
[2026-01-07 15:43:31] 2026-01-07 20:42:38,657 | INFO     | mean x: 1767812676.5
[2026-01-07 15:43:31] 2026-01-07 20:42:38,657 | INFO     | mean y: 2502550.10989011
[2026-01-07 15:43:31] 2026-01-07 20:42:38,657 | INFO     | intersect: -17395189374.83748
[2026-01-07 15:43:31] 2026-01-07 20:42:38,658 | INFO     | chi2: 1.6307312974272705
[2026-01-07 15:43:31] 2026-01-07 20:42:38,658 | INFO     | current chi2=1.6307312974272705 (change=-0.08246142101689395 %)
[2026-01-07 15:43:31] 2026-01-07 20:42:38,658 | INFO     | right removable region: 181
[2026-01-07 15:43:31] 2026-01-07 20:42:38,658 | INFO     | sum of square deviations: 1869302025.5
[2026-01-07 15:43:31] 2026-01-07 20:42:38,659 | INFO     | sum of deviations: -12030290741.0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,659 | INFO     | mean x: 1767812981.5
[2026-01-07 15:43:31] 2026-01-07 20:42:38,659 | INFO     | mean y: 2532390.681318681
[2026-01-07 15:43:31] 2026-01-07 20:42:38,660 | INFO     | intersect: 11379668804.723606
[2026-01-07 15:43:31] 2026-01-07 20:42:38,660 | INFO     | chi2: 0.06976707539052533
[2026-01-07 15:43:31] 2026-01-07 20:42:38,660 | INFO     | current chi2=0.06976707539052533 (change=95.71820284418081 %)
[2026-01-07 15:43:31] 2026-01-07 20:42:38,660 | INFO     | sum of square deviations: 1719429448.0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,661 | INFO     | sum of deviations: -14175949210.000002
[2026-01-07 15:43:31] 2026-01-07 20:42:38,661 | INFO     | mean x: 1767813134.0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,661 | INFO     | mean y: 2534517.2711864407
[2026-01-07 15:43:31] 2026-01-07 20:42:38,661 | INFO     | intersect: 14577386209.793165
[2026-01-07 15:43:31] 2026-01-07 20:42:38,662 | INFO     | chi2: 0.043044483302017406
[2026-01-07 15:43:31] 2026-01-07 20:42:38,662 | INFO     | current chi2=0.043044483302017406 (change=38.3025831868781 %)
[2026-01-07 15:43:31] 2026-01-07 20:42:38,662 | INFO     | sum of square deviations: 1577789583.0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,663 | INFO     | sum of deviations: -12214162797.0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,663 | INFO     | mean x: 1767813286.5
[2026-01-07 15:43:31] 2026-01-07 20:42:38,663 | INFO     | mean y: 2532401.7790697673
[2026-01-07 15:43:31] 2026-01-07 20:42:38,663 | INFO     | intersect: 13687728139.321598
[2026-01-07 15:43:31] 2026-01-07 20:42:38,663 | INFO     | chi2: 0.0423139026814748
[2026-01-07 15:43:31] 2026-01-07 20:42:38,664 | INFO     | current chi2=0.0423139026814748 (change=1.69726888209241 %)
[2026-01-07 15:43:31] 2026-01-07 20:42:38,664 | INFO     | left removable region: 30
[2026-01-07 15:43:31] 2026-01-07 20:42:38,664 | INFO     | sum of square deviations: 1067554900.0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,665 | INFO     | sum of deviations: -3635568158.0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,665 | INFO     | mean x: 1767813561.0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,665 | INFO     | mean y: 2522200.0066225166
[2026-01-07 15:43:31] 2026-01-07 20:42:38,665 | INFO     | intersect: 6022827752.11658
[2026-01-07 15:43:31] 2026-01-07 20:42:38,665 | INFO     | chi2: 0.025646762330092002
[2026-01-07 15:43:31] 2026-01-07 20:42:38,665 | INFO     | current memory leak: -3.41 B/s (using 151 data points, chi2=0.03)
[2026-01-07 15:43:31] 2026-01-07 20:42:38,666 | INFO     | could have reported an average CPU frequency of 2217 MHz (10 samples)
[2026-01-07 15:43:31] 2026-01-07 20:42:38,666 | INFO     | ..............................
[2026-01-07 15:43:31] 2026-01-07 20:42:38,666 | INFO     | . Timing measurements:
[2026-01-07 15:43:31] 2026-01-07 20:42:38,666 | INFO     | . get job = 0 s
[2026-01-07 15:43:31] 2026-01-07 20:42:38,666 | INFO     | . initial setup = 2 s
[2026-01-07 15:43:31] 2026-01-07 20:42:38,666 | INFO     | . payload setup = 6 s
[2026-01-07 15:43:31] 2026-01-07 20:42:38,666 | INFO     | . stage-in = 0 s
[2026-01-07 15:43:31] 2026-01-07 20:42:38,666 | INFO     | . payload execution = 11394 s
[2026-01-07 15:43:31] 2026-01-07 20:42:38,666 | INFO     | . stage-out = 2 s
[2026-01-07 15:43:31] 2026-01-07 20:42:38,667 | INFO     | . log creation = 0 s
[2026-01-07 15:43:31] 2026-01-07 20:42:38,667 | INFO     | ..............................
[2026-01-07 15:43:31] 2026-01-07 20:42:38,748 | INFO     | 
[2026-01-07 15:43:31] 2026-01-07 20:42:38,749 | INFO     | job summary report
[2026-01-07 15:43:31] 2026-01-07 20:42:38,749 | INFO     | --------------------------------------------------
[2026-01-07 15:43:31] 2026-01-07 20:42:38,749 | INFO     | PanDA job id: 6962016643
[2026-01-07 15:43:31] 2026-01-07 20:42:38,749 | INFO     | task id: 47898826
[2026-01-07 15:43:31] 2026-01-07 20:42:38,749 | INFO     | errors: (none)
[2026-01-07 15:43:31] 2026-01-07 20:42:38,749 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-07 15:43:31] 2026-01-07 20:42:38,749 | INFO     | pilot state: finished 
[2026-01-07 15:43:31] 2026-01-07 20:42:38,749 | INFO     | transexitcode: 0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,749 | INFO     | exeerrorcode: 0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,749 | INFO     | exeerrordiag: 
[2026-01-07 15:43:31] 2026-01-07 20:42:38,750 | INFO     | exitcode: 0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,750 | INFO     | exitmsg: OK
[2026-01-07 15:43:31] 2026-01-07 20:42:38,750 | INFO     | cpuconsumptiontime: 86675 s
[2026-01-07 15:43:31] 2026-01-07 20:42:38,750 | INFO     | nevents: 400
[2026-01-07 15:43:31] 2026-01-07 20:42:38,750 | INFO     | neventsw: 0
[2026-01-07 15:43:31] 2026-01-07 20:42:38,750 | INFO     | pid: 19268
[2026-01-07 15:43:31] 2026-01-07 20:42:38,750 | INFO     | pgrp: 19268
[2026-01-07 15:43:31] 2026-01-07 20:42:38,750 | INFO     | corecount: 8
[2026-01-07 15:43:31] 2026-01-07 20:42:38,751 | INFO     | event service: False
[2026-01-07 15:43:31] 2026-01-07 20:42:38,751 | INFO     | sizes: {0: 2283964, 5: 2284226, 11: 2284282, 11404: 2313759, 11406: 2322757, 11410: 2322813, 11414: 2323135}
[2026-01-07 15:43:31] 2026-01-07 20:42:38,751 | INFO     | --------------------------------------------------
[2026-01-07 15:43:31] 2026-01-07 20:42:38,751 | INFO     | 
[2026-01-07 15:43:31] 2026-01-07 20:42:38,751 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-07 15:43:31] 2026-01-07 20:42:38,767 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,767 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,767 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,767 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,769 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-07 15:43:31] 2026-01-07 20:42:38,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,769 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-07 15:43:31] 2026-01-07 20:42:38,769 | INFO     | job 6962016643 has completed (purged errors)
[2026-01-07 15:43:31] 2026-01-07 20:42:38,769 | INFO     | overall cleanup function is called
[2026-01-07 15:43:31] 2026-01-07 20:42:39,776 | INFO     | --- collectZombieJob: --- 10, [19268]
[2026-01-07 15:43:31] 2026-01-07 20:42:39,776 | INFO     | zombie collector waiting for pid 19268
[2026-01-07 15:43:31] 2026-01-07 20:42:39,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-07 15:43:31] 2026-01-07 20:42:39,776 | INFO     | collected zombie processes
[2026-01-07 15:43:31] 2026-01-07 20:42:39,776 | INFO     | will attempt to kill all subprocesses of pid=19268
[2026-01-07 15:43:31] 2026-01-07 20:42:39,876 | INFO     | process IDs to be killed: [19268] (in reverse order)
[2026-01-07 15:43:31] 2026-01-07 20:42:39,919 | WARNING  | found no corresponding commands to process id(s)
[2026-01-07 15:43:31] 2026-01-07 20:42:39,919 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-07 15:43:31] 2026-01-07 20:42:39,922 | INFO     | did not find any defunct processes belonging to 19268
[2026-01-07 15:43:31] 2026-01-07 20:42:39,924 | INFO     | did not find any defunct processes belonging to 19268
[2026-01-07 15:43:31] 2026-01-07 20:42:39,924 | INFO     | ready for new job
[2026-01-07 15:43:31] 2026-01-07 20:42:39,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-07 15:43:31] 2026-01-07 20:42:39,926 | INFO     | ***************************************
[2026-01-07 15:43:31] 2026-01-07 20:42:39,926 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-07 15:43:31] 2026-01-07 20:42:39,926 | INFO     | ***************************************
[2026-01-07 15:43:31] 2026-01-07 20:42:39,926 | INFO     | 
[2026-01-07 15:43:31] 2026-01-07 20:42:39,927 | INFO     | architecture information:
[2026-01-07 15:43:31] 2026-01-07 20:42:39,927 | INFO     | executing command: cat /etc/os-release
[2026-01-07 15:43:31] 2026-01-07 20:42:39,939 | INFO     | cat /etc/os-release:
[2026-01-07 15:43:31] NAME="CentOS Linux"
[2026-01-07 15:43:31] VERSION="7 (Core)"
[2026-01-07 15:43:31] ID="centos"
[2026-01-07 15:43:31] ID_LIKE="rhel fedora"
[2026-01-07 15:43:31] VERSION_ID="7"
[2026-01-07 15:43:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-07 15:43:31] ANSI_COLOR="0;31"
[2026-01-07 15:43:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-07 15:43:31] HOME_URL="https://www.centos.org/"
[2026-01-07 15:43:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-07 15:43:31] 
[2026-01-07 15:43:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-07 15:43:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-07 15:43:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-07 15:43:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-07 15:43:31] 
[2026-01-07 15:43:31] 2026-01-07 20:42:39,939 | INFO     | ***************************************
[2026-01-07 15:43:31] 2026-01-07 20:42:40,442 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-07 15:43:31] 2026-01-07 20:42:40,455 | INFO     | sufficient remaining disk space (28451012608 B)
[2026-01-07 15:43:31] 2026-01-07 20:42:40,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-07 15:43:31] 2026-01-07 20:42:40,455 | INFO     | current server update state: UPDATING_FINAL
[2026-01-07 15:43:31] 2026-01-07 20:42:40,455 | INFO     | update_server=False
[2026-01-07 15:43:31] 2026-01-07 20:42:40,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-07 15:43:31] 2026-01-07 20:42:40,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-07 15:43:31] 2026-01-07 20:42:40,456 | INFO     | aborting loop
[2026-01-07 15:43:31] 2026-01-07 20:42:40,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-07 15:43:31] 2026-01-07 20:42:40,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-07 15:43:31] 2026-01-07 20:42:40,650 | INFO     | all data control threads have been joined
[2026-01-07 15:43:31] 2026-01-07 20:42:41,461 | INFO     | [job] retrieve thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:41,461 | INFO     | [job] job monitor thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:41,461 | INFO     | [job] queue monitor thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:41,655 | INFO     | [data] control thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:41,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-07 15:43:31] 2026-01-07 20:42:41,939 | INFO     | all payload control threads have been joined
[2026-01-07 15:43:31] 2026-01-07 20:42:42,057 | INFO     | all job control threads have been joined
[2026-01-07 15:43:31] 2026-01-07 20:42:42,081 | INFO     | [payload] failed_post thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:42,091 | INFO     | [payload] execute_payloads thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:42,230 | INFO     | [job] validate thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:42,261 | INFO     | [job] create_data_payload thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:42,554 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:42,669 | INFO     | [payload] validate_pre thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:42,842 | INFO     | [data] copytool_in thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:42,944 | INFO     | [payload] control thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:43,028 | INFO     | [payload] validate_post thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:43,062 | INFO     | [job] control thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:43,761 | INFO     | [data] copytool_out thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:42:44,612 | INFO     | [data] queue_monitor thread has finished
[2026-01-07 15:43:31] 2026-01-07 20:43:10,382 | INFO     | PID=4450 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-07 15:43:31] 2026-01-07 20:43:10,383 | INFO     | .. there are 2 such processes running
[2026-01-07 15:43:31] 2026-01-07 20:43:10,384 | INFO     | found 0 job(s) in 20 queues
[2026-01-07 15:43:31] 2026-01-07 20:43:10,384 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-07 15:43:31] 2026-01-07 20:43:10,384 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-07 15:43:31] 2026-01-07 20:43:25,099 | INFO     | [monitor] cgroup control has ended
[2026-01-07 15:43:31] 2026-01-07 20:43:25,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860521420608)>', '<ExcThread(monitor, started 139860081886976)>']
[2026-01-07 15:43:31] 2026-01-07 20:43:26,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-07 15:43:31] 2026-01-07 20:43:26,465 | INFO     | [monitor] control thread has ended
[2026-01-07 15:43:31] 2026-01-07 20:43:30,884 | INFO     | all workflow threads have been joined
[2026-01-07 15:43:31] 2026-01-07 20:43:30,884 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-07 15:43:31] 2026-01-07 20:43:30,885 | INFO     | traces error code: 0
[2026-01-07 15:43:31] 2026-01-07 20:43:30,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-07 15:43:31] 2026-01-07 20:43:30,982 [wrapper] ==== pilot stdout END ====
[2026-01-07 15:43:31] 2026-01-07 20:43:30,984 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-07 15:43:31] 2026-01-07 20:43:30,986 [wrapper] pilotpid: 4450
[2026-01-07 15:43:31] 2026-01-07 20:43:30,989 [wrapper] Pilot exit status: 0
[2026-01-07 15:43:31] 2026-01-07 20:43:30,998 [wrapper] pandaids: 6962016643
[2026-01-07 15:43:31] 2026-01-07 20:43:31,026 [wrapper] cleanup supervisor_pilot  3842 4451
[2026-01-07 15:43:31] 2026-01-07 20:43:31,029 [wrapper] Test setup, not cleaning
[2026-01-07 15:43:31] 2026-01-07 20:43:31,031 [wrapper] apfmon messages muted
[2026-01-07 15:43:31] 2026-01-07 20:43:31,034 [wrapper] ==== wrapper stdout END ====
[2026-01-07 15:43:31] 2026-01-07 20:43:31,036 [wrapper] ==== wrapper stderr END ====
[2026-01-07 15:43:31]  *** Error codes and diagnostics ***
[2026-01-07 15:43:31]     "exeErrorCode": 0,
[2026-01-07 15:43:31]     "exeErrorDiag": "",
[2026-01-07 15:43:31]     "pilotErrorCode": 0,
[2026-01-07 15:43:31]     "pilotErrorDiag": "",
[2026-01-07 15:43:31]  *** Listing of results directory ***
[2026-01-07 15:43:31] total 448252
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-07 15:43:31] -rwx------ 1 boincer umatlas     36322 Jan  7 10:32 runpilot2-wrapper.sh
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 10:33 queuedata.json
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas       100 Jan  7 12:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-07 15:43:31] -rwxr-xr-x 1 boincer umatlas      7986 Jan  7 12:31 run_atlas
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas       105 Jan  7 12:31 job.xml
[2026-01-07 15:43:31] -rw-r--r-- 2 boincer umatlas 227551671 Jan  7 12:31 EVNT.47898824._000425.pool.root.1
[2026-01-07 15:43:31] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 12:31 start_atlas.sh
[2026-01-07 15:43:31] drwxrwx--x 2 boincer umatlas      4096 Jan  7 12:31 shared
[2026-01-07 15:43:31] -rw-r--r-- 2 boincer umatlas    592386 Jan  7 12:31 input.tar.gz
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas         0 Jan  7 12:31 boinc_lockfile
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas      2516 Jan  7 12:31 pandaJob.out
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas        57 Jan  7 12:31 setup.sh.local
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas    989801 Jan  7 12:32 agis_schedconf.cvmfs.json
[2026-01-07 15:43:31] drwx------ 5 boincer umatlas      4096 Jan  7 12:32 pilot3
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas      5950 Jan  7 15:37 init_data.xml
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas 223426564 Jan  7 15:41 HITS.47898826._009337.pool.root.1
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas       530 Jan  7 15:42 boinc_task_state.xml
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas      1046 Jan  7 15:42 memory_monitor_summary.json
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas   1516240 Jan  7 15:42 agis_ddmendpoints.agis.ALL.json
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas    420527 Jan  7 15:42 log.47898826._009337.job.log.tgz.1
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas      7845 Jan  7 15:42 heartbeat.json
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas        95 Jan  7 15:43 pilot_heartbeat.json
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas        28 Jan  7 15:43 wrapper_checkpoint.txt
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas      8192 Jan  7 15:43 boinc_mmap_file
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas      4820 Jan  7 15:43 pilotlog.txt
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas   1635127 Jan  7 15:43 log.47898826._009337.job.log.1
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas       357 Jan  7 15:43 output.list
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas       620 Jan  7 15:43 runtime_log
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas   2078720 Jan  7 15:43 result.tar.gz
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas      9338 Jan  7 15:43 runtime_log.err
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas       661 Jan  7 15:43 pniKDmwhkx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRJiKDmid4SKo.diag
[2026-01-07 15:43:31] -rw-r--r-- 1 boincer umatlas     21145 Jan  7 15:43 stderr.txt
[2026-01-07 15:43:31] HITS file was successfully produced:
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas 223426564 Jan  7 15:41 shared/HITS.pool.root.1
[2026-01-07 15:43:31]  *** Contents of shared directory: ***
[2026-01-07 15:43:31] total 443044
[2026-01-07 15:43:31] -rw-r--r-- 2 boincer umatlas 227551671 Jan  7 12:31 ATLAS.root_0
[2026-01-07 15:43:31] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 12:31 start_atlas.sh
[2026-01-07 15:43:31] -rw-r--r-- 2 boincer umatlas    592386 Jan  7 12:31 input.tar.gz
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas 223426564 Jan  7 15:41 HITS.pool.root.1
[2026-01-07 15:43:31] -rw------- 1 boincer umatlas   2078720 Jan  7 15:43 result.tar.gz
15:43:32 (29943): run_atlas exited; CPU time 86831.369498
15:43:32 (29943): called boinc_finish(0)

</stderr_txt>
]]>

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