Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-08 13:20:59 (16304): vboxwrapper version 26210
2026-01-08 13:20:59 (16304): BOINC client version: 8.2.8
2026-01-08 13:20:59 (16304): Detected: VirtualBox VboxManage Interface (Version: 6.1.2)
2026-01-08 13:20:59 (16304): Successfully copied 'init_data.xml' to the shared directory.
2026-01-08 13:21:00 (16304): Create VM. (boinc_3e5d00dedb4451d5, slot#4)
2026-01-08 13:21:00 (16304): Setting Memory Size for VM. (4400MB)
2026-01-08 13:21:01 (16304): Setting CPU Count for VM. (4)
2026-01-08 13:21:01 (16304): Setting Chipset Options for VM.
2026-01-08 13:21:01 (16304): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-08 13:21:02 (16304): Setting Boot Options for VM.
2026-01-08 13:21:02 (16304): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-08 13:21:02 (16304): Enabling VM Network Access.
2026-01-08 13:21:03 (16304): Disabling USB Support for VM.
2026-01-08 13:21:03 (16304): Disabling COM Port Support for VM.
2026-01-08 13:21:03 (16304): Disabling LPT Port Support for VM.
2026-01-08 13:21:03 (16304): Disabling Audio Support for VM.
2026-01-08 13:21:04 (16304): Disabling Clipboard Support for VM.
2026-01-08 13:21:05 (16304): Disabling Drag and Drop Support for VM.
2026-01-08 13:21:05 (16304): Adding storage controller(s) to VM.
2026-01-08 13:21:05 (16304): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-08 13:21:06 (16304): Adding VirtualBox Guest Additions to VM.
2026-01-08 13:21:06 (16304): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-08 13:21:07 (16304): forwarding host port 62581 to guest port 80
2026-01-08 13:21:07 (16304): Enabling remote desktop for VM.
2026-01-08 13:21:07 (16304): Required extension pack not installed, remote desktop not enabled.
2026-01-08 13:21:07 (16304): Enabling shared directory for VM.
2026-01-08 13:21:08 (16304): Starting VM using VBoxManage interface. (boinc_3e5d00dedb4451d5, slot#4)
2026-01-08 13:21:12 (16304): Successfully started VM. (PID = '14380')
2026-01-08 13:21:12 (16304): Reporting VM Process ID to BOINC.
2026-01-08 13:21:12 (16304): Guest Log: BIOS: VirtualBox 6.1.2
2026-01-08 13:21:12 (16304): Guest Log: CPUID EDX: 0x178bfbff
2026-01-08 13:21:12 (16304): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-08 13:21:12 (16304): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-08 13:21:12 (16304): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-08 13:21:12 (16304): Detected: Web Application Enabled (http://localhost:62581)
2026-01-08 13:21:12 (16304): Preference change detected
2026-01-08 13:21:12 (16304): Setting CPU throttle for VM. (90%)
2026-01-08 13:21:12 (16304): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-08 13:21:14 (16304): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-08 13:21:14 (16304): Guest Log: BIOS: Booting from Hard Disk...
2026-01-08 13:21:17 (16304): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-08 13:21:17 (16304): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-08 13:21:17 (16304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-08 13:21:26 (16304): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-08 13:21:26 (16304): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-01-08 13:21:36 (16304): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-08 13:21:36 (16304): Guest Log: 00:00:00.000177 main     Log opened 2026-01-08T13:21:34.876585000Z
2026-01-08 13:21:36 (16304): Guest Log: 00:00:00.000248 main     OS Product: Linux
2026-01-08 13:21:36 (16304): Guest Log: 00:00:00.000275 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-08 13:21:36 (16304): Guest Log: 00:00:00.000298 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-08 13:21:36 (16304): Guest Log: 00:00:00.000321 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-08 13:21:36 (16304): Guest Log: 00:00:00.000322 main     Process ID: 1308
2026-01-08 13:21:36 (16304): Guest Log: 00:00:00.000323 main     Package type: LINUX_64BITS_GENERIC
2026-01-08 13:21:36 (16304): Guest Log: 00:00:00.002430 main     5.2.32 r132073 started. Verbose level = 0
2026-01-08 13:21:36 (16304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-08 13:21:36 (16304): Guest Log: [INFO] Mounting shared directory
2026-01-08 13:21:36 (16304): Guest Log: [INFO] Checking for init_data.xml
2026-01-08 13:21:46 (16304): Guest Log: 00:00:10.149666 timesync vgsvcTimeSyncWorker: Radical guest time change: -37 788 665 221 000ns (GuestNow=1 767 840 706 215 913 000 ns GuestLast=1 767 878 494 881 134 000 ns fSetTimeLastLoop=true )
2026-01-08 13:22:52 (16304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-08 13:22:52 (16304): Guest Log: [INFO] Detected branch: prod
2026-01-08 13:22:53 (16304): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-08 13:22:53 (16304): Guest Log: Copying input files
2026-01-08 13:22:54 (16304): Guest Log: Copied input files into RunAtlas.
2026-01-08 13:22:54 (16304): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-08 13:22:54 (16304): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-08 13:22:54 (16304): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-08 13:22:54 (16304): Guest Log: Further information can be found at the LHC@home message board.
2026-01-08 13:23:07 (16304): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-08 13:23:08 (16304): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-08 13:23:08 (16304): Guest Log: 2.6.3.0 1607 0 30124 154887 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-08 13:23:10 (16304): Guest Log: copied the webapp to /var/www
2026-01-08 13:23:10 (16304): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-08 13:23:10 (16304): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-08 13:23:12 (16304): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-08 13:23:12 (16304): Guest Log:  *** Starting ATLAS job. (PandaID=6962018104 taskID=47898826) ***
2026-01-08 15:01:18 (16304): Status Report: Elapsed Time: '6000.000000'
2026-01-08 15:01:18 (16304): Status Report: CPU Time: '15088.312500'
2026-01-08 16:41:22 (16304): Status Report: Elapsed Time: '12000.000000'
2026-01-08 16:41:22 (16304): Status Report: CPU Time: '36700.515625'
2026-01-08 18:21:27 (16304): Status Report: Elapsed Time: '18000.000000'
2026-01-08 18:21:27 (16304): Status Report: CPU Time: '58319.234375'
2026-01-08 18:26:33 (16304): Guest Log:  *** Job finished ***
2026-01-08 18:26:33 (16304): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:05,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:09,848 | INFO     | [data] queue_monitor thread has finished
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:18,002 | INFO     | [monitor] cgroup control has ended
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:19,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139810590947136)>', '<ExcThread(monitor, started 139810144499456)>']
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:20,945 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:20,945 | INFO     | [monitor] control thread has ended
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:24,996 | INFO     | all workflow threads have been joined
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:24,996 | INFO     | end of generic workflow (traces error code: 0)
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:24,997 | INFO     | traces error code: 0
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:24,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:25,495 [wrapper] ==== pilot stdout END ====
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:25,500 [wrapper] ==== wrapper stdout RESUME ====
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:25,504 [wrapper] pilotpid: 6044
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:25,509 [wrapper] Pilot exit status: 0
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:28,056 [wrapper] pandaids: 6962018104
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:28,092 [wrapper] cleanup supervisor_pilot 16327 6045
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:28,097 [wrapper] Test setup, not cleaning
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:28,104 [wrapper] apfmon messages muted
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:28,109 [wrapper] ==== wrapper stdout END ====
2026-01-08 18:26:33 (16304): Guest Log: 2026-01-08 07:56:28,115 [wrapper] ==== wrapper stderr END ====
2026-01-08 18:26:33 (16304): Guest Log:  *** Error codes and diagnostics ***
2026-01-08 18:26:33 (16304): Guest Log:     "exeErrorCode": 0,
2026-01-08 18:26:33 (16304): Guest Log:     "exeErrorDiag": "",
2026-01-08 18:26:33 (16304): Guest Log:     "pilotErrorCode": 0,
2026-01-08 18:26:33 (16304): Guest Log:     "pilotErrorDiag": "",
2026-01-08 18:26:33 (16304): Guest Log:  *** Listing of results directory ***
2026-01-08 18:26:33 (16304): Guest Log: total 226444
2026-01-08 18:26:33 (16304): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  7 15:25 pilot3.tar.gz
2026-01-08 18:26:33 (16304): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  7 15:35 runpilot2-wrapper.sh
2026-01-08 18:26:33 (16304): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  7 15:36 queuedata.json
2026-01-08 18:26:33 (16304): Guest Log: -rwxr-xr-x. 1 atlas atlas      5899 Jan  8 02:52 init_data.xml
2026-01-08 18:26:33 (16304): Guest Log: -rwxr-xr-x. 1 atlas atlas    592403 Jan  8 02:52 input.tar.gz
2026-01-08 18:26:33 (16304): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan  8 02:52 start_atlas.sh
2026-01-08 18:26:33 (16304): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  8 02:52 EVNT.47898824._000514.pool.root.1 -> /data/./ATLAS.root_0
2026-01-08 18:26:33 (16304): Guest Log: -rw-r--r--. 1 atlas atlas      2516 Jan  8 02:53 pandaJob.out
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas    989843 Jan  8 03:01 agis_schedconf.cvmfs.json
2026-01-08 18:26:33 (16304): Guest Log: drwx------. 5 atlas atlas      4096 Jan  8 03:01 pilot3
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas 222472814 Jan  8 07:55 HITS.47898826._010221.pool.root.1
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas        95 Jan  8 07:55 pilot_heartbeat.json
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas         0 Jan  8 07:55 memory_monitor_summary.json
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan  8 07:55 agis_ddmendpoints.agis.ALL.json
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas    443957 Jan  8 07:55 log.47898826._010221.job.log.tgz.1
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas      7393 Jan  8 07:56 heartbeat.json
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas      4798 Jan  8 07:56 pilotlog.txt
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas   2340384 Jan  8 07:56 log.47898826._010221.job.log.1
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas       357 Jan  8 07:56 output.list
2026-01-08 18:26:33 (16304): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan  8 07:56 runtime_log
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas   2805760 Jan  8 07:56 result.tar.gz
2026-01-08 18:26:33 (16304): Guest Log: -rw-r--r--. 1 atlas atlas      8780 Jan  8 07:56 runtime_log.err
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas       668 Jan  8 07:56 ipVNDmGkkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtKdKDmWMR0om.diag
2026-01-08 18:26:33 (16304): Guest Log: Looking for outputfile HITS.47898826._010221.pool.root.1
2026-01-08 18:26:33 (16304): Guest Log: HITS file was successfully produced
2026-01-08 18:26:33 (16304): Guest Log: -rw-------. 1 atlas atlas 222472814 Jan  8 07:55 /home/atlas/RunAtlas/HITS.47898826._010221.pool.root.1
2026-01-08 18:26:34 (16304): Guest Log: Successfully finished the ATLAS job!
2026-01-08 18:26:34 (16304): Guest Log: Copying the results back to the shared directory!
2026-01-08 18:26:34 (16304): Guest Log:  *** Contents of shared directory: ***
2026-01-08 18:26:35 (16304): Guest Log: total 438820
2026-01-08 18:26:35 (16304): Guest Log: -rwxrwxrwx. 1 root root 223451854 Jan  8 02:50 ATLAS.root_0
2026-01-08 18:26:35 (16304): Guest Log: -rwxrwxrwx. 1 root root 222472814 Jan  8 07:56 HITS.pool.root.1
2026-01-08 18:26:35 (16304): Guest Log: -rwxrwxrwx. 1 root root      5899 Jan  8 02:50 init_data.xml
2026-01-08 18:26:35 (16304): Guest Log: -rwxrwxrwx. 1 root root    592403 Jan  7 16:23 input.tar.gz
2026-01-08 18:26:35 (16304): Guest Log: -rwxrwxrwx. 1 root root   2805760 Jan  8 07:56 result.tar.gz
2026-01-08 18:26:35 (16304): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  7 16:23 start_atlas.sh
2026-01-08 18:26:35 (16304): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-08 18:26:35 (16304): VM Completion File Detected.
2026-01-08 18:26:35 (16304): Powering off VM.
2026-01-08 18:26:36 (16304): Successfully stopped VM.
2026-01-08 18:26:36 (16304): Deregistering VM. (boinc_3e5d00dedb4451d5, slot#4)
2026-01-08 18:26:36 (16304): Removing network bandwidth throttle group from VM.
2026-01-08 18:26:36 (16304): Removing VM from VirtualBox.
2026-01-08 18:26:41 (16304): called boinc_finish(0)

</stderr_txt>
]]>

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