Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:11:15 (2421511): wrapper (7.7.26015): starting
01:11:15 (2421511): wrapper: running run_atlas (--nthreads 4)
[2026-01-09 01:11:15] Arguments: --nthreads 4
[2026-01-09 01:11:15] Threads: 4
[2026-01-09 01:11:15] Checking for CVMFS
[2026-01-09 01:11:15] No cvmfs_config command found, will try listing directly
[2026-01-09 01:11:15] CVMFS is ok
[2026-01-09 01:11:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 01:11:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 01:11:15] Further information can be found at the LHC@home message board.
[2026-01-09 01:11:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 01:11:15] Checking for apptainer binary...
[2026-01-09 01:11:15] which: no apptainer in ((null))
[2026-01-09 01:11:15] apptainer is not installed, using version from CVMFS
[2026-01-09 01:11:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 01:11:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2026-01-09 01:11:15] apptainer works
[2026-01-09 01:11:15] Set ATHENA_PROC_NUMBER=4
[2026-01-09 01:11:15] Set ATHENA_CORE_NUMBER=4
[2026-01-09 01:11:15] Starting ATLAS job with PandaID=6962016993
[2026-01-09 01:11:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 06:49:05]  *** The last 200 lines of the pilot log: ***
[2026-01-09 06:49:05] 2026-01-09 05:42:09,859 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6962016993/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:49:05] 2026-01-09 05:42:10,022 | INFO     | time since job start (19842s) is within the limit (174528.0s)
[2026-01-09 06:49:05] 2026-01-09 05:42:10,184 | INFO     | number of running child processes to parent process 2432237: 1
[2026-01-09 06:49:05] 2026-01-09 05:42:10,184 | INFO     | maximum number of monitored processes: 6
[2026-01-09 06:49:05] 2026-01-09 05:42:11,453 | INFO     | PID=2425507 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-09 06:49:05] 2026-01-09 05:42:12,453 | INFO     | time since job start (19844s) is within the limit (174528.0s)
[2026-01-09 06:49:05] 2026-01-09 05:42:12,687 | INFO     | monitor loop #1424: job 0:6962016993 is in state 'finished'
[2026-01-09 06:49:05] 2026-01-09 05:42:12,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 06:49:05] 2026-01-09 05:42:14,458 | INFO     | time since job start (19846s) is within the limit (174528.0s)
[2026-01-09 06:49:05] 2026-01-09 05:42:14,858 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 06:49:05] 2026-01-09 05:42:14,865 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2644.612899999999
[2026-01-09 06:49:05] 2026-01-09 05:42:14,872 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6962016993/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 06:49:05] 2026-01-09 05:42:14,873 | INFO     | extracted standard info from prmon json
[2026-01-09 06:49:05] 2026-01-09 05:42:14,873 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 06:49:05] 2026-01-09 05:42:14,873 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 06:49:05] 2026-01-09 05:42:14,874 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 06:49:05] 2026-01-09 05:42:14,874 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 06:49:05] 2026-01-09 05:42:14,880 | INFO     | fitting pss+swap vs Time
[2026-01-09 06:49:05] 2026-01-09 05:42:14,881 | INFO     | sum of square deviations: 10644478650.0
[2026-01-09 06:49:05] 2026-01-09 05:42:14,884 | INFO     | sum of deviations: 19584205550.0
[2026-01-09 06:49:05] 2026-01-09 05:42:14,884 | INFO     | mean x: 1767927397.0
[2026-01-09 06:49:05] 2026-01-09 05:42:14,884 | INFO     | mean y: 2371766.9076923076
[2026-01-09 06:49:05] 2026-01-09 05:42:14,885 | INFO     | intersect: -3250343061.0115175
[2026-01-09 06:49:05] 2026-01-09 05:42:14,885 | INFO     | chi2: 1.29207821637415
[2026-01-09 06:49:05] 2026-01-09 05:42:14,886 | INFO     | sum of square deviations: 10160711440.0
[2026-01-09 06:49:05] 2026-01-09 05:42:14,889 | INFO     | sum of deviations: 19174335722.5
[2026-01-09 06:49:05] 2026-01-09 05:42:14,889 | INFO     | mean x: 1767927244.5
[2026-01-09 06:49:05] 2026-01-09 05:42:14,889 | INFO     | mean y: 2371637.703125
[2026-01-09 06:49:05] 2026-01-09 05:42:14,889 | INFO     | intersect: -3333893811.736441
[2026-01-09 06:49:05] 2026-01-09 05:42:14,889 | INFO     | chi2: 1.2923185050678654
[2026-01-09 06:49:05] 2026-01-09 05:42:14,890 | INFO     | current chi2=1.2923185050678654 (change=-0.018597070260165653 %)
[2026-01-09 06:49:05] 2026-01-09 05:42:14,890 | INFO     | right removable region: 319
[2026-01-09 06:49:05] 2026-01-09 05:42:14,890 | INFO     | sum of square deviations: 10160711440.0
[2026-01-09 06:49:05] 2026-01-09 05:42:14,893 | INFO     | sum of deviations: -15730308174.499989
[2026-01-09 06:49:05] 2026-01-09 05:42:14,893 | INFO     | mean x: 1767927549.5
[2026-01-09 06:49:05] 2026-01-09 05:42:14,893 | INFO     | mean y: 2382781.678125
[2026-01-09 06:49:05] 2026-01-09 05:42:14,894 | INFO     | intersect: 2739400297.434244
[2026-01-09 06:49:05] 2026-01-09 05:42:14,894 | INFO     | chi2: 0.047691152291292595
[2026-01-09 06:49:05] 2026-01-09 05:42:14,894 | INFO     | current chi2=0.047691152291292595 (change=96.3089577947437 %)
[2026-01-09 06:49:05] 2026-01-09 05:42:14,895 | INFO     | sum of square deviations: 9691828230.0
[2026-01-09 06:49:05] 2026-01-09 05:42:14,898 | INFO     | sum of deviations: -13595664139.999996
[2026-01-09 06:49:05] 2026-01-09 05:42:14,898 | INFO     | mean x: 1767927702.0
[2026-01-09 06:49:05] 2026-01-09 05:42:14,898 | INFO     | mean y: 2382093.9206349207
[2026-01-09 06:49:05] 2026-01-09 05:42:14,898 | INFO     | intersect: 2482425145.6322517
[2026-01-09 06:49:05] 2026-01-09 05:42:14,899 | INFO     | chi2: 0.04254925142243005
[2026-01-09 06:49:05] 2026-01-09 05:42:14,899 | INFO     | current chi2=0.04254925142243005 (change=10.781666245882143 %)
[2026-01-09 06:49:05] 2026-01-09 05:42:14,899 | INFO     | left removable region: 20
[2026-01-09 06:49:05] 2026-01-09 05:42:14,899 | INFO     | sum of square deviations: 8288713550.0
[2026-01-09 06:49:05] 2026-01-09 05:42:14,902 | INFO     | sum of deviations: -10710575748.999998
[2026-01-09 06:49:05] 2026-01-09 05:42:14,902 | INFO     | mean x: 1767927824.0
[2026-01-09 06:49:05] 2026-01-09 05:42:14,902 | INFO     | mean y: 2381147.8193979934
[2026-01-09 06:49:05] 2026-01-09 05:42:14,902 | INFO     | intersect: 2286876173.916269
[2026-01-09 06:49:05] 2026-01-09 05:42:14,903 | INFO     | chi2: 0.041788230515587915
[2026-01-09 06:49:05] 2026-01-09 05:42:14,903 | INFO     | current memory leak: -1.29 B/s (using 299 data points, chi2=0.04)
[2026-01-09 06:49:05] 2026-01-09 05:42:14,904 | INFO     | could have reported an average CPU frequency of 2558 MHz (14 samples)
[2026-01-09 06:49:05] 2026-01-09 05:42:14,904 | INFO     | ..............................
[2026-01-09 06:49:05] 2026-01-09 05:42:14,904 | INFO     | . Timing measurements:
[2026-01-09 06:49:05] 2026-01-09 05:42:14,904 | INFO     | . get job = 0 s
[2026-01-09 06:49:05] 2026-01-09 05:42:14,904 | INFO     | . initial setup = 1 s
[2026-01-09 06:49:05] 2026-01-09 05:42:14,904 | INFO     | . payload setup = 6 s
[2026-01-09 06:49:05] 2026-01-09 05:42:14,905 | INFO     | . stage-in = 0 s
[2026-01-09 06:49:05] 2026-01-09 05:42:14,905 | INFO     | . payload execution = 19815 s
[2026-01-09 06:49:05] 2026-01-09 05:42:14,905 | INFO     | . stage-out = 1 s
[2026-01-09 06:49:05] 2026-01-09 05:42:14,905 | INFO     | . log creation = 0 s
[2026-01-09 06:49:05] 2026-01-09 05:42:14,905 | INFO     | ..............................
[2026-01-09 06:49:05] 2026-01-09 05:42:15,013 | INFO     | 
[2026-01-09 06:49:05] 2026-01-09 05:42:15,013 | INFO     | job summary report
[2026-01-09 06:49:05] 2026-01-09 05:42:15,013 | INFO     | --------------------------------------------------
[2026-01-09 06:49:05] 2026-01-09 05:42:15,013 | INFO     | PanDA job id: 6962016993
[2026-01-09 06:49:05] 2026-01-09 05:42:15,014 | INFO     | task id: 47898826
[2026-01-09 06:49:05] 2026-01-09 05:42:15,014 | INFO     | errors: (none)
[2026-01-09 06:49:05] 2026-01-09 05:42:15,014 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 06:49:05] 2026-01-09 05:42:15,014 | INFO     | pilot state: finished 
[2026-01-09 06:49:05] 2026-01-09 05:42:15,014 | INFO     | transexitcode: 0
[2026-01-09 06:49:05] 2026-01-09 05:42:15,014 | INFO     | exeerrorcode: 0
[2026-01-09 06:49:05] 2026-01-09 05:42:15,014 | INFO     | exeerrordiag: 
[2026-01-09 06:49:05] 2026-01-09 05:42:15,015 | INFO     | exitcode: 0
[2026-01-09 06:49:05] 2026-01-09 05:42:15,015 | INFO     | exitmsg: OK
[2026-01-09 06:49:05] 2026-01-09 05:42:15,015 | INFO     | cpuconsumptiontime: 76168 s
[2026-01-09 06:49:05] 2026-01-09 05:42:15,015 | INFO     | nevents: 400
[2026-01-09 06:49:05] 2026-01-09 05:42:15,015 | INFO     | neventsw: 0
[2026-01-09 06:49:05] 2026-01-09 05:42:15,015 | INFO     | pid: 2432237
[2026-01-09 06:49:05] 2026-01-09 05:42:15,015 | INFO     | pgrp: 2432237
[2026-01-09 06:49:05] 2026-01-09 05:42:15,015 | INFO     | corecount: 4
[2026-01-09 06:49:05] 2026-01-09 05:42:15,016 | INFO     | event service: False
[2026-01-09 06:49:05] 2026-01-09 05:42:15,016 | INFO     | sizes: {0: 2283975, 5: 2284237, 11: 2284293, 19822: 2317641, 19823: 2326661, 19825: 2326717, 19831: 2327039}
[2026-01-09 06:49:05] 2026-01-09 05:42:15,016 | INFO     | --------------------------------------------------
[2026-01-09 06:49:05] 2026-01-09 05:42:15,016 | INFO     | 
[2026-01-09 06:49:05] 2026-01-09 05:42:15,016 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-01-09 06:49:05] 2026-01-09 05:42:15,035 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,035 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,036 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,036 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,037 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 06:49:05] 2026-01-09 05:42:15,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,038 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 06:49:05] 2026-01-09 05:42:15,038 | INFO     | job 6962016993 has completed (purged errors)
[2026-01-09 06:49:05] 2026-01-09 05:42:15,038 | INFO     | overall cleanup function is called
[2026-01-09 06:49:05] 2026-01-09 05:42:16,046 | INFO     | --- collectZombieJob: --- 10, [2432237]
[2026-01-09 06:49:05] 2026-01-09 05:42:16,046 | INFO     | zombie collector waiting for pid 2432237
[2026-01-09 06:49:05] 2026-01-09 05:42:16,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 06:49:05] 2026-01-09 05:42:16,047 | INFO     | collected zombie processes
[2026-01-09 06:49:05] 2026-01-09 05:42:16,047 | INFO     | will attempt to kill all subprocesses of pid=2432237
[2026-01-09 06:49:05] 2026-01-09 05:42:16,371 | INFO     | process IDs to be killed: [2432237] (in reverse order)
[2026-01-09 06:49:05] 2026-01-09 05:42:16,447 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 06:49:05] 2026-01-09 05:42:16,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 06:49:05] 2026-01-09 05:42:16,458 | INFO     | did not find any defunct processes belonging to 2432237
[2026-01-09 06:49:05] 2026-01-09 05:42:16,468 | INFO     | did not find any defunct processes belonging to 2432237
[2026-01-09 06:49:05] 2026-01-09 05:42:16,468 | INFO     | ready for new job
[2026-01-09 06:49:05] 2026-01-09 05:42:16,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 06:49:05] 2026-01-09 05:42:16,471 | INFO     | ***************************************
[2026-01-09 06:49:05] 2026-01-09 05:42:16,471 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 06:49:05] 2026-01-09 05:42:16,472 | INFO     | ***************************************
[2026-01-09 06:49:05] 2026-01-09 05:42:16,472 | INFO     | 
[2026-01-09 06:49:05] 2026-01-09 05:42:16,474 | INFO     | architecture information:
[2026-01-09 06:49:05] 2026-01-09 05:42:16,475 | INFO     | executing command: cat /etc/os-release
[2026-01-09 06:49:05] 2026-01-09 05:42:16,487 | INFO     | cat /etc/os-release:
[2026-01-09 06:49:05] NAME="CentOS Linux"
[2026-01-09 06:49:05] VERSION="7 (Core)"
[2026-01-09 06:49:05] ID="centos"
[2026-01-09 06:49:05] ID_LIKE="rhel fedora"
[2026-01-09 06:49:05] VERSION_ID="7"
[2026-01-09 06:49:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 06:49:05] ANSI_COLOR="0;31"
[2026-01-09 06:49:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 06:49:05] HOME_URL="https://www.centos.org/"
[2026-01-09 06:49:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 06:49:05] 
[2026-01-09 06:49:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 06:49:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 06:49:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 06:49:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 06:49:05] 
[2026-01-09 06:49:05] 2026-01-09 05:42:16,487 | INFO     | ***************************************
[2026-01-09 06:49:05] 2026-01-09 05:42:16,990 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-09 06:49:05] 2026-01-09 05:42:17,005 | INFO     | sufficient remaining disk space (1667313434624 B)
[2026-01-09 06:49:05] 2026-01-09 05:42:17,006 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 06:49:05] 2026-01-09 05:42:17,006 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 06:49:05] 2026-01-09 05:42:17,006 | INFO     | update_server=False
[2026-01-09 06:49:05] 2026-01-09 05:42:17,006 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 06:49:05] 2026-01-09 05:42:17,007 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:49:05] 2026-01-09 05:42:17,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 06:49:05] 2026-01-09 05:42:17,007 | INFO     | aborting loop
[2026-01-09 06:49:05] 2026-01-09 05:42:17,056 | INFO     | all payload control threads have been joined
[2026-01-09 06:49:05] 2026-01-09 05:42:17,073 | INFO     | all data control threads have been joined
[2026-01-09 06:49:05] 2026-01-09 05:42:18,012 | INFO     | [job] job monitor thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:18,012 | INFO     | [job] retrieve thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:18,013 | INFO     | [job] queue monitor thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:18,062 | INFO     | [payload] control thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:18,078 | INFO     | [data] control thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:18,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 06:49:05] 2026-01-09 05:42:18,205 | INFO     | [job] validate thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:18,388 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:18,388 | INFO     | [data] copytool_in thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:18,459 | INFO     | all job control threads have been joined
[2026-01-09 06:49:05] 2026-01-09 05:42:18,488 | INFO     | [payload] validate_post thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:18,724 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:19,039 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:19,231 | INFO     | [payload] failed_post thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:19,464 | INFO     | [job] control thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:19,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 06:49:05] 2026-01-09 05:42:20,100 | INFO     | [data] copytool_out thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:24,000 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:27,892 | INFO     | job.realtimelogging is not enabled
[2026-01-09 06:49:05] 2026-01-09 05:42:28,897 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 06:49:05] 2026-01-09 05:42:47,935 | INFO     | PID=2425507 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 06:49:05] 2026-01-09 05:42:47,936 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 06:49:05] 2026-01-09 05:42:47,936 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 06:49:05] 2026-01-09 05:42:47,936 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 06:49:05] 2026-01-09 05:43:00,521 | INFO     | [monitor] cgroup control has ended
[2026-01-09 06:49:05] 2026-01-09 05:43:01,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23390101509952)>', '<ExcThread(monitor, started 23389244737280)>']
[2026-01-09 06:49:05] 2026-01-09 05:43:02,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 06:49:05] 2026-01-09 05:43:02,002 | INFO     | [monitor] control thread has ended
[2026-01-09 06:49:05] 2026-01-09 05:43:06,658 | INFO     | all workflow threads have been joined
[2026-01-09 06:49:05] 2026-01-09 05:43:06,658 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 06:49:05] 2026-01-09 05:43:06,659 | INFO     | traces error code: 0
[2026-01-09 06:49:05] 2026-01-09 05:43:06,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 06:49:05] 2026-01-09 05:43:06,789 [wrapper] ==== pilot stdout END ====
[2026-01-09 06:49:05] 2026-01-09 05:43:06,793 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 06:49:05] 2026-01-09 05:43:06,796 [wrapper] pilotpid: 2425507
[2026-01-09 06:49:05] 2026-01-09 05:43:06,798 [wrapper] Pilot exit status: 0
[2026-01-09 06:49:05] 2026-01-09 05:43:06,808 [wrapper] pandaids: 6962016993
[2026-01-09 06:49:05] 2026-01-09 05:43:06,866 [wrapper] cleanup supervisor_pilot 2629738 2425508
[2026-01-09 06:49:05] 2026-01-09 05:43:06,869 [wrapper] Test setup, not cleaning
[2026-01-09 06:49:05] 2026-01-09 05:43:06,872 [wrapper] apfmon messages muted
[2026-01-09 06:49:05] 2026-01-09 05:43:06,874 [wrapper] ==== wrapper stdout END ====
[2026-01-09 06:49:05] 2026-01-09 05:43:06,877 [wrapper] ==== wrapper stderr END ====
[2026-01-09 06:49:05]  *** Error codes and diagnostics ***
[2026-01-09 06:49:05]     "exeErrorCode": 0,
[2026-01-09 06:49:05]     "exeErrorDiag": "",
[2026-01-09 06:49:05]     "pilotErrorCode": 0,
[2026-01-09 06:49:05]     "pilotErrorDiag": "",
[2026-01-09 06:49:05]  *** Listing of results directory ***
[2026-01-09 06:49:05] total 443000
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc    579449 Jan  7 16:25 pilot3.tar.gz
[2026-01-09 06:49:05] -rwx------ 1 boinc boinc     36322 Jan  7 16:33 runpilot2-wrapper.sh
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc      5112 Jan  7 16:36 queuedata.json
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc       100 Jan  9 01:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 06:49:05] -rwxr-xr-x 1 boinc boinc      7986 Jan  9 01:11 run_atlas
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc       105 Jan  9 01:11 job.xml
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc      6425 Jan  9 01:11 init_data.xml
[2026-01-09 06:49:05] -rw-r--r-- 2 boinc boinc 225644631 Jan  9 01:11 EVNT.47898824._000490.pool.root.1
[2026-01-09 06:49:05] -rw-r--r-- 2 boinc boinc     15847 Jan  9 01:11 start_atlas.sh
[2026-01-09 06:49:05] drwxrwx--x 2 boinc boinc      4096 Jan  9 01:11 shared
[2026-01-09 06:49:05] -rw-r--r-- 2 boinc boinc    592397 Jan  9 01:11 input.tar.gz
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc         0 Jan  9 01:11 boinc_lockfile
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc      2516 Jan  9 01:11 pandaJob.out
[2026-01-09 06:49:05] -rw------- 1 boinc boinc    989837 Jan  9 01:11 agis_schedconf.cvmfs.json
[2026-01-09 06:49:05] drwx------ 5 boinc boinc      4096 Jan  9 01:11 pilot3
[2026-01-09 06:49:05] -rw------- 1 boinc boinc 217619507 Jan  9 06:41 HITS.47898826._009675.pool.root.1
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc       529 Jan  9 06:41 boinc_task_state.xml
[2026-01-09 06:49:05] -rw------- 1 boinc boinc      1038 Jan  9 06:42 memory_monitor_summary.json
[2026-01-09 06:49:05] -rw------- 1 boinc boinc   1516240 Jan  9 06:42 agis_ddmendpoints.agis.ALL.json
[2026-01-09 06:49:05] -rw------- 1 boinc boinc    487254 Jan  9 06:42 log.47898826._009675.job.log.tgz.1
[2026-01-09 06:49:05] -rw------- 1 boinc boinc      7826 Jan  9 06:42 heartbeat.json
[2026-01-09 06:49:05] -rw------- 1 boinc boinc        95 Jan  9 06:42 pilot_heartbeat.json
[2026-01-09 06:49:05] -rw------- 1 boinc boinc      4831 Jan  9 06:43 pilotlog.txt
[2026-01-09 06:49:05] -rw------- 1 boinc boinc   2743722 Jan  9 06:43 log.47898826._009675.job.log.1
[2026-01-09 06:49:05] -rw------- 1 boinc boinc       357 Jan  9 06:43 output.list
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc       620 Jan  9 06:43 runtime_log
[2026-01-09 06:49:05] -rw------- 1 boinc boinc   3246080 Jan  9 06:43 result.tar.gz
[2026-01-09 06:49:05] -rw------- 1 boinc boinc       667 Jan  9 06:43 uzQKDmcikx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyLiKDmf05kLo.diag
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc      9206 Jan  9 06:43 runtime_log.err
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc        26 Jan  9 06:48 wrapper_checkpoint.txt
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc      8192 Jan  9 06:49 boinc_mmap_file
[2026-01-09 06:49:05] -rw-r--r-- 1 boinc boinc     21229 Jan  9 06:49 stderr.txt
[2026-01-09 06:49:05] HITS file was successfully produced:
[2026-01-09 06:49:05] -rw------- 1 boinc boinc 217619507 Jan  9 06:41 shared/HITS.pool.root.1
[2026-01-09 06:49:05]  *** Contents of shared directory: ***
[2026-01-09 06:49:05] total 436652
[2026-01-09 06:49:05] -rw-r--r-- 2 boinc boinc 225644631 Jan  9 01:11 ATLAS.root_0
[2026-01-09 06:49:05] -rw-r--r-- 2 boinc boinc     15847 Jan  9 01:11 start_atlas.sh
[2026-01-09 06:49:05] -rw-r--r-- 2 boinc boinc    592397 Jan  9 01:11 input.tar.gz
[2026-01-09 06:49:05] -rw------- 1 boinc boinc 217619507 Jan  9 06:41 HITS.pool.root.1
[2026-01-09 06:49:05] -rw------- 1 boinc boinc   3246080 Jan  9 06:43 result.tar.gz
06:49:07 (2421511): run_atlas exited; CPU time 76921.938187
06:49:07 (2421511): called boinc_finish(0)

</stderr_txt>
]]>

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