Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:10:38 (298371): wrapper (7.7.26015): starting
23:10:38 (298371): wrapper: running run_atlas (--nthreads 4)
[2026-01-07 23:10:38] Arguments: --nthreads 4
[2026-01-07 23:10:38] Threads: 4
[2026-01-07 23:10:38] Checking for CVMFS
[2026-01-07 23:10:38] No cvmfs_config command found, will try listing directly
[2026-01-07 23:10:39] CVMFS is ok
[2026-01-07 23:10:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 23:10:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 23:10:39] Further information can be found at the LHC@home message board.
[2026-01-07 23:10:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:10:39] Checking for apptainer binary...
[2026-01-07 23:10:39] which: no apptainer in ((null))
[2026-01-07 23:10:39] apptainer is not installed, using version from CVMFS
[2026-01-07 23:10:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:10:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2026-01-07 23:10:39] apptainer works
[2026-01-07 23:10:39] Set ATHENA_PROC_NUMBER=4
[2026-01-07 23:10:39] Set ATHENA_CORE_NUMBER=4
[2026-01-07 23:10:39] Starting ATLAS job with PandaID=6962017335
[2026-01-07 23:10:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 04:19:58]  *** The last 200 lines of the pilot log: ***
[2026-01-08 04:19:58] 2026-01-08 03:13:18,056 | INFO     | job 6962017335 has finished - writing final server update
[2026-01-08 04:19:58] 2026-01-08 03:13:18,057 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4006236/.job.ad'
[2026-01-08 04:19:58] 2026-01-08 03:13:18,057 | INFO     | total number of processed events: 400 (read)
[2026-01-08 04:19:58] 2026-01-08 03:13:18,057 | INFO     | executing command: lscpu
[2026-01-08 04:19:58] 2026-01-08 03:13:18,111 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 04:19:58] 2026-01-08 03:13:19,720 | INFO     | time since job start (18147s) is within the limit (174528.0s)
[2026-01-08 04:19:58] 2026-01-08 03:13:20,527 | INFO     | monitor loop #1318: job 0:6962017335 is in state 'finished'
[2026-01-08 04:19:58] 2026-01-08 03:13:20,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 04:19:58] 2026-01-08 03:13:21,727 | INFO     | time since job start (18149s) is within the limit (174528.0s)
[2026-01-08 04:19:58] 2026-01-08 03:13:22,556 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 04:19:58] 2026-01-08 03:13:22,564 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2538.8
[2026-01-08 04:19:58] 2026-01-08 03:13:22,573 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6962017335/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 04:19:58] 2026-01-08 03:13:22,574 | INFO     | extracted standard info from prmon json
[2026-01-08 04:19:58] 2026-01-08 03:13:22,574 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 04:19:58] 2026-01-08 03:13:22,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 04:19:58] 2026-01-08 03:13:22,575 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 04:19:58] 2026-01-08 03:13:22,575 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 04:19:58] 2026-01-08 03:13:22,582 | INFO     | fitting pss+swap vs Time
[2026-01-08 04:19:58] 2026-01-08 03:13:22,583 | INFO     | sum of square deviations: 8123493708.0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,586 | INFO     | sum of deviations: -16540415289.000002
[2026-01-08 04:19:58] 2026-01-08 03:13:22,586 | INFO     | mean x: 1767832906.0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,586 | INFO     | mean y: 2413742.292929293
[2026-01-08 04:19:58] 2026-01-08 03:13:22,586 | INFO     | intersect: 3601935263.187754
[2026-01-08 04:19:58] 2026-01-08 03:13:22,587 | INFO     | chi2: 1.2779945265957418
[2026-01-08 04:19:58] 2026-01-08 03:13:22,587 | INFO     | sum of square deviations: 7720081493.0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,590 | INFO     | sum of deviations: -15438471455.999996
[2026-01-08 04:19:58] 2026-01-08 03:13:22,591 | INFO     | mean x: 1767832753.5
[2026-01-08 04:19:58] 2026-01-08 03:13:22,591 | INFO     | mean y: 2414158.2260273974
[2026-01-08 04:19:58] 2026-01-08 03:13:22,591 | INFO     | intersect: 3537692319.29707
[2026-01-08 04:19:58] 2026-01-08 03:13:22,592 | INFO     | chi2: 1.278154650193192
[2026-01-08 04:19:58] 2026-01-08 03:13:22,592 | INFO     | current chi2=1.278154650193192 (change=-0.012529286637615085 %)
[2026-01-08 04:19:58] 2026-01-08 03:13:22,592 | INFO     | right removable region: 291
[2026-01-08 04:19:58] 2026-01-08 03:13:22,592 | INFO     | sum of square deviations: 7720081493.0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,595 | INFO     | sum of deviations: -51404344034.50001
[2026-01-08 04:19:58] 2026-01-08 03:13:22,596 | INFO     | mean x: 1767833058.5
[2026-01-08 04:19:58] 2026-01-08 03:13:22,596 | INFO     | mean y: 2426795.352739726
[2026-01-08 04:19:58] 2026-01-08 03:13:22,596 | INFO     | intersect: 11773584757.49271
[2026-01-08 04:19:58] 2026-01-08 03:13:22,596 | INFO     | chi2: 0.05505215145287118
[2026-01-08 04:19:58] 2026-01-08 03:13:22,597 | INFO     | current chi2=0.05505215145287118 (change=95.6923014686521 %)
[2026-01-08 04:19:58] 2026-01-08 03:13:22,597 | INFO     | sum of square deviations: 7330250928.0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,600 | INFO     | sum of deviations: -52601595274.0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,600 | INFO     | mean x: 1767833211.0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,600 | INFO     | mean y: 2427253.031358885
[2026-01-08 04:19:58] 2026-01-08 03:13:22,601 | INFO     | intersect: 12688329548.920383
[2026-01-08 04:19:58] 2026-01-08 03:13:22,601 | INFO     | chi2: 0.044697271838334086
[2026-01-08 04:19:58] 2026-01-08 03:13:22,601 | INFO     | current chi2=0.044697271838334086 (change=18.809218788482145 %)
[2026-01-08 04:19:58] 2026-01-08 03:13:22,601 | INFO     | left removable region: 20
[2026-01-08 04:19:58] 2026-01-08 03:13:22,602 | INFO     | sum of square deviations: 6171352920.0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,604 | INFO     | sum of deviations: -45835246523.999985
[2026-01-08 04:19:58] 2026-01-08 03:13:22,605 | INFO     | mean x: 1767833333.0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,605 | INFO     | mean y: 2425976.826568266
[2026-01-08 04:19:58] 2026-01-08 03:13:22,605 | INFO     | intersect: 13132298418.378584
[2026-01-08 04:19:58] 2026-01-08 03:13:22,606 | INFO     | chi2: 0.04386645552622514
[2026-01-08 04:19:58] 2026-01-08 03:13:22,606 | INFO     | current memory leak: -7.43 B/s (using 271 data points, chi2=0.04)
[2026-01-08 04:19:58] 2026-01-08 03:13:22,606 | INFO     | could have reported an average CPU frequency of 2474 MHz (14 samples)
[2026-01-08 04:19:58] 2026-01-08 03:13:22,607 | INFO     | ..............................
[2026-01-08 04:19:58] 2026-01-08 03:13:22,607 | INFO     | . Timing measurements:
[2026-01-08 04:19:58] 2026-01-08 03:13:22,607 | INFO     | . get job = 0 s
[2026-01-08 04:19:58] 2026-01-08 03:13:22,607 | INFO     | . initial setup = 1 s
[2026-01-08 04:19:58] 2026-01-08 03:13:22,607 | INFO     | . payload setup = 5 s
[2026-01-08 04:19:58] 2026-01-08 03:13:22,607 | INFO     | . stage-in = 0 s
[2026-01-08 04:19:58] 2026-01-08 03:13:22,607 | INFO     | . payload execution = 18117 s
[2026-01-08 04:19:58] 2026-01-08 03:13:22,608 | INFO     | . stage-out = 1 s
[2026-01-08 04:19:58] 2026-01-08 03:13:22,608 | INFO     | . log creation = 0 s
[2026-01-08 04:19:58] 2026-01-08 03:13:22,608 | INFO     | ..............................
[2026-01-08 04:19:58] 2026-01-08 03:13:22,758 | INFO     | 
[2026-01-08 04:19:58] 2026-01-08 03:13:22,758 | INFO     | job summary report
[2026-01-08 04:19:58] 2026-01-08 03:13:22,759 | INFO     | --------------------------------------------------
[2026-01-08 04:19:58] 2026-01-08 03:13:22,759 | INFO     | PanDA job id: 6962017335
[2026-01-08 04:19:58] 2026-01-08 03:13:22,759 | INFO     | task id: 47898826
[2026-01-08 04:19:58] 2026-01-08 03:13:22,759 | INFO     | errors: (none)
[2026-01-08 04:19:58] 2026-01-08 03:13:22,759 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 04:19:58] 2026-01-08 03:13:22,759 | INFO     | pilot state: finished 
[2026-01-08 04:19:58] 2026-01-08 03:13:22,760 | INFO     | transexitcode: 0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,760 | INFO     | exeerrorcode: 0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,760 | INFO     | exeerrordiag: 
[2026-01-08 04:19:58] 2026-01-08 03:13:22,760 | INFO     | exitcode: 0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,760 | INFO     | exitmsg: OK
[2026-01-08 04:19:58] 2026-01-08 03:13:22,760 | INFO     | cpuconsumptiontime: 70351 s
[2026-01-08 04:19:58] 2026-01-08 03:13:22,760 | INFO     | nevents: 400
[2026-01-08 04:19:58] 2026-01-08 03:13:22,761 | INFO     | neventsw: 0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,761 | INFO     | pid: 309566
[2026-01-08 04:19:58] 2026-01-08 03:13:22,761 | INFO     | pgrp: 309566
[2026-01-08 04:19:58] 2026-01-08 03:13:22,761 | INFO     | corecount: 4
[2026-01-08 04:19:58] 2026-01-08 03:13:22,761 | INFO     | event service: False
[2026-01-08 04:19:58] 2026-01-08 03:13:22,761 | INFO     | sizes: {0: 2283748, 1: 2284003, 5: 2284265, 12: 2284321, 18127: 2316736, 18128: 2325756, 18129: 2325940, 18135: 2326134}
[2026-01-08 04:19:58] 2026-01-08 03:13:22,762 | INFO     | --------------------------------------------------
[2026-01-08 04:19:58] 2026-01-08 03:13:22,762 | INFO     | 
[2026-01-08 04:19:58] 2026-01-08 03:13:22,762 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-01-08 04:19:58] 2026-01-08 03:13:22,787 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,787 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,788 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,788 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,790 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 04:19:58] 2026-01-08 03:13:22,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,790 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 04:19:58] 2026-01-08 03:13:22,791 | INFO     | job 6962017335 has completed (purged errors)
[2026-01-08 04:19:58] 2026-01-08 03:13:22,791 | INFO     | overall cleanup function is called
[2026-01-08 04:19:58] 2026-01-08 03:13:23,800 | INFO     | --- collectZombieJob: --- 10, [309566]
[2026-01-08 04:19:58] 2026-01-08 03:13:23,800 | INFO     | zombie collector waiting for pid 309566
[2026-01-08 04:19:58] 2026-01-08 03:13:23,800 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 04:19:58] 2026-01-08 03:13:23,800 | INFO     | collected zombie processes
[2026-01-08 04:19:58] 2026-01-08 03:13:23,801 | INFO     | will attempt to kill all subprocesses of pid=309566
[2026-01-08 04:19:58] 2026-01-08 03:13:24,164 | INFO     | process IDs to be killed: [309566] (in reverse order)
[2026-01-08 04:19:58] 2026-01-08 03:13:24,261 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 04:19:58] 2026-01-08 03:13:24,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 04:19:58] 2026-01-08 03:13:24,272 | INFO     | did not find any defunct processes belonging to 309566
[2026-01-08 04:19:58] 2026-01-08 03:13:24,283 | INFO     | did not find any defunct processes belonging to 309566
[2026-01-08 04:19:58] 2026-01-08 03:13:24,283 | INFO     | ready for new job
[2026-01-08 04:19:58] 2026-01-08 03:13:24,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 04:19:58] 2026-01-08 03:13:24,286 | INFO     | ***************************************
[2026-01-08 04:19:58] 2026-01-08 03:13:24,287 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 04:19:58] 2026-01-08 03:13:24,287 | INFO     | ***************************************
[2026-01-08 04:19:58] 2026-01-08 03:13:24,287 | INFO     | 
[2026-01-08 04:19:58] 2026-01-08 03:13:24,290 | INFO     | architecture information:
[2026-01-08 04:19:58] 2026-01-08 03:13:24,291 | INFO     | executing command: cat /etc/os-release
[2026-01-08 04:19:58] 2026-01-08 03:13:24,307 | INFO     | cat /etc/os-release:
[2026-01-08 04:19:58] NAME="CentOS Linux"
[2026-01-08 04:19:58] VERSION="7 (Core)"
[2026-01-08 04:19:58] ID="centos"
[2026-01-08 04:19:58] ID_LIKE="rhel fedora"
[2026-01-08 04:19:58] VERSION_ID="7"
[2026-01-08 04:19:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 04:19:58] ANSI_COLOR="0;31"
[2026-01-08 04:19:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 04:19:58] HOME_URL="https://www.centos.org/"
[2026-01-08 04:19:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 04:19:58] 
[2026-01-08 04:19:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 04:19:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 04:19:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 04:19:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 04:19:58] 
[2026-01-08 04:19:58] 2026-01-08 03:13:24,307 | INFO     | ***************************************
[2026-01-08 04:19:58] 2026-01-08 03:13:24,810 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-08 04:19:58] 2026-01-08 03:13:24,830 | INFO     | sufficient remaining disk space (1669468258304 B)
[2026-01-08 04:19:58] 2026-01-08 03:13:24,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 04:19:58] 2026-01-08 03:13:24,831 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 04:19:58] 2026-01-08 03:13:24,831 | INFO     | update_server=False
[2026-01-08 04:19:58] 2026-01-08 03:13:24,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 04:19:58] 2026-01-08 03:13:24,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 04:19:58] 2026-01-08 03:13:24,831 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:19:58] 2026-01-08 03:13:24,832 | INFO     | aborting loop
[2026-01-08 04:19:58] 2026-01-08 03:13:25,242 | INFO     | all data control threads have been joined
[2026-01-08 04:19:58] 2026-01-08 03:13:25,814 | INFO     | all job control threads have been joined
[2026-01-08 04:19:58] 2026-01-08 03:13:25,837 | INFO     | [job] retrieve thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:25,837 | INFO     | [job] job monitor thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:25,875 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:26,081 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:26,141 | INFO     | [payload] failed_post thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:26,202 | INFO     | all payload control threads have been joined
[2026-01-08 04:19:58] 2026-01-08 03:13:26,247 | INFO     | [data] control thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:26,458 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:26,820 | INFO     | [job] control thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:26,836 | INFO     | [data] copytool_out thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:26,847 | INFO     | [job] validate thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:27,124 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:27,208 | INFO     | [payload] control thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:27,268 | INFO     | [data] copytool_in thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:27,286 | INFO     | [payload] validate_post thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:27,741 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 04:19:58] 2026-01-08 03:13:27,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 04:19:58] 2026-01-08 03:13:28,747 | INFO     | [job] queue monitor thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:31,870 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 04:19:58] 2026-01-08 03:13:55,235 | INFO     | PID=302718 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 04:19:58] 2026-01-08 03:13:55,235 | INFO     | .. there are 2 such processes running
[2026-01-08 04:19:58] 2026-01-08 03:13:55,236 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 04:19:58] 2026-01-08 03:13:55,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 04:19:58] 2026-01-08 03:13:55,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 04:19:58] 2026-01-08 03:14:19,206 | INFO     | [monitor] cgroup control has ended
[2026-01-08 04:19:58] 2026-01-08 03:14:20,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22895984740160)>', '<ExcThread(monitor, started 22895745005312)>']
[2026-01-08 04:19:58] 2026-01-08 03:14:21,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 04:19:58] 2026-01-08 03:14:21,363 | INFO     | [monitor] control thread has ended
[2026-01-08 04:19:58] 2026-01-08 03:14:25,750 | INFO     | all workflow threads have been joined
[2026-01-08 04:19:58] 2026-01-08 03:14:25,751 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 04:19:58] 2026-01-08 03:14:25,751 | INFO     | traces error code: 0
[2026-01-08 04:19:58] 2026-01-08 03:14:25,751 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 04:19:58] 2026-01-08 03:14:25,921 [wrapper] ==== pilot stdout END ====
[2026-01-08 04:19:58] 2026-01-08 03:14:25,924 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 04:19:58] 2026-01-08 03:14:25,927 [wrapper] pilotpid: 302718
[2026-01-08 04:19:58] 2026-01-08 03:14:25,930 [wrapper] Pilot exit status: 0
[2026-01-08 04:19:58] 2026-01-08 03:14:25,941 [wrapper] pandaids: 6962017335
[2026-01-08 04:19:58] 2026-01-08 03:14:26,002 [wrapper] cleanup supervisor_pilot  473893 302719
[2026-01-08 04:19:58] 2026-01-08 03:14:26,005 [wrapper] Test setup, not cleaning
[2026-01-08 04:19:58] 2026-01-08 03:14:26,008 [wrapper] apfmon messages muted
[2026-01-08 04:19:58] 2026-01-08 03:14:26,012 [wrapper] ==== wrapper stdout END ====
[2026-01-08 04:19:58] 2026-01-08 03:14:26,015 [wrapper] ==== wrapper stderr END ====
[2026-01-08 04:19:58]  *** Error codes and diagnostics ***
[2026-01-08 04:19:58]     "exeErrorCode": 0,
[2026-01-08 04:19:58]     "exeErrorDiag": "",
[2026-01-08 04:19:58]     "pilotErrorCode": 0,
[2026-01-08 04:19:58]     "pilotErrorDiag": "",
[2026-01-08 04:19:58]  *** Listing of results directory ***
[2026-01-08 04:19:58] total 442452
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc    579449 Jan  7 16:25 pilot3.tar.gz
[2026-01-08 04:19:58] -rwx------ 1 boinc boinc     36322 Jan  7 16:35 runpilot2-wrapper.sh
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc      5112 Jan  7 16:36 queuedata.json
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc       100 Jan  7 23:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 04:19:58] -rwxr-xr-x 1 boinc boinc      7986 Jan  7 23:10 run_atlas
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc       105 Jan  7 23:10 job.xml
[2026-01-08 04:19:58] -rw-r--r-- 2 boinc boinc 224433219 Jan  7 23:10 EVNT.47898824._000503.pool.root.1
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc      6423 Jan  7 23:10 init_data.xml
[2026-01-08 04:19:58] -rw-r--r-- 2 boinc boinc     15847 Jan  7 23:10 start_atlas.sh
[2026-01-08 04:19:58] drwxrwx--x 2 boinc boinc      4096 Jan  7 23:10 shared
[2026-01-08 04:19:58] -rw-r--r-- 2 boinc boinc    592394 Jan  7 23:10 input.tar.gz
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc         0 Jan  7 23:10 boinc_lockfile
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc      2516 Jan  7 23:10 pandaJob.out
[2026-01-08 04:19:58] -rw------- 1 boinc boinc    989785 Jan  7 23:10 agis_schedconf.cvmfs.json
[2026-01-08 04:19:58] drwx------ 5 boinc boinc      4096 Jan  7 23:10 pilot3
[2026-01-08 04:19:58] -rw------- 1 boinc boinc 218736812 Jan  8 04:12 HITS.47898826._009998.pool.root.1
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc       527 Jan  8 04:12 boinc_task_state.xml
[2026-01-08 04:19:58] -rw------- 1 boinc boinc      1034 Jan  8 04:13 memory_monitor_summary.json
[2026-01-08 04:19:58] -rw------- 1 boinc boinc   1516240 Jan  8 04:13 agis_ddmendpoints.agis.ALL.json
[2026-01-08 04:19:58] -rw------- 1 boinc boinc    481584 Jan  8 04:13 log.47898826._009998.job.log.tgz.1
[2026-01-08 04:19:58] -rw------- 1 boinc boinc      7828 Jan  8 04:13 heartbeat.json
[2026-01-08 04:19:58] -rw------- 1 boinc boinc        95 Jan  8 04:13 pilot_heartbeat.json
[2026-01-08 04:19:58] -rw------- 1 boinc boinc      4833 Jan  8 04:14 pilotlog.txt
[2026-01-08 04:19:58] -rw------- 1 boinc boinc   2510909 Jan  8 04:14 log.47898826._009998.job.log.1
[2026-01-08 04:19:58] -rw------- 1 boinc boinc       357 Jan  8 04:14 output.list
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc       620 Jan  8 04:14 runtime_log
[2026-01-08 04:19:58] -rw------- 1 boinc boinc   3010560 Jan  8 04:14 result.tar.gz
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc      9206 Jan  8 04:14 runtime_log.err
[2026-01-08 04:19:58] -rw------- 1 boinc boinc       665 Jan  8 04:14 YwNKDm4jkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCJdKDmKRVIyn.diag
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc        27 Jan  8 04:19 wrapper_checkpoint.txt
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc      8192 Jan  8 04:19 boinc_mmap_file
[2026-01-08 04:19:58] -rw-r--r-- 1 boinc boinc     21192 Jan  8 04:19 stderr.txt
[2026-01-08 04:19:58] HITS file was successfully produced:
[2026-01-08 04:19:58] -rw------- 1 boinc boinc 218736812 Jan  8 04:12 shared/HITS.pool.root.1
[2026-01-08 04:19:58]  *** Contents of shared directory: ***
[2026-01-08 04:19:58] total 436332
[2026-01-08 04:19:58] -rw-r--r-- 2 boinc boinc 224433219 Jan  7 23:10 ATLAS.root_0
[2026-01-08 04:19:58] -rw-r--r-- 2 boinc boinc     15847 Jan  7 23:10 start_atlas.sh
[2026-01-08 04:19:58] -rw-r--r-- 2 boinc boinc    592394 Jan  7 23:10 input.tar.gz
[2026-01-08 04:19:58] -rw------- 1 boinc boinc 218736812 Jan  8 04:12 HITS.pool.root.1
[2026-01-08 04:19:58] -rw------- 1 boinc boinc   3010560 Jan  8 04:14 result.tar.gz
04:20:00 (298371): run_atlas exited; CPU time 71089.821200
04:20:00 (298371): called boinc_finish(0)

</stderr_txt>
]]>

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