Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:15:03 (1368226): wrapper (7.7.26015): starting
23:15:03 (1368226): wrapper: running run_atlas (--nthreads 4)
[2026-01-07 23:15:03] Arguments: --nthreads 4
[2026-01-07 23:15:03] Threads: 4
[2026-01-07 23:15:03] Checking for CVMFS
[2026-01-07 23:15:03] No cvmfs_config command found, will try listing directly
[2026-01-07 23:15:04] CVMFS is ok
[2026-01-07 23:15:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 23:15:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 23:15:04] Further information can be found at the LHC@home message board.
[2026-01-07 23:15:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 23:15:04] Checking for apptainer binary...
[2026-01-07 23:15:04] which: no apptainer in ((null))
[2026-01-07 23:15:04] apptainer is not installed, using version from CVMFS
[2026-01-07 23:15:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 23:15:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2026-01-07 23:15:04] apptainer works
[2026-01-07 23:15:04] Set ATHENA_PROC_NUMBER=4
[2026-01-07 23:15:04] Set ATHENA_CORE_NUMBER=4
[2026-01-07 23:15:04] Starting ATLAS job with PandaID=6962016895
[2026-01-07 23:15:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
03:19:50 (1540189): wrapper (7.7.26015): starting
03:19:50 (1540189): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 03:19:50] Arguments: --nthreads 4
[2026-01-08 03:19:50] Threads: 4
[2026-01-08 03:19:50] This job has been restarted, cleaning up previous attempt
[2026-01-08 03:19:50] Checking for CVMFS
[2026-01-08 03:19:50] No cvmfs_config command found, will try listing directly
[2026-01-08 03:19:50] CVMFS is ok
[2026-01-08 03:19:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 03:19:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 03:19:50] Further information can be found at the LHC@home message board.
[2026-01-08 03:19:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 03:19:50] Checking for apptainer binary...
[2026-01-08 03:19:50] which: no apptainer in ((null))
[2026-01-08 03:19:50] apptainer is not installed, using version from CVMFS
[2026-01-08 03:19:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 03:19:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2026-01-08 03:19:50] apptainer works
[2026-01-08 03:19:50] Set ATHENA_PROC_NUMBER=4
[2026-01-08 03:19:50] Set ATHENA_CORE_NUMBER=4
[2026-01-08 03:19:50] Starting ATLAS job with PandaID=6962016895
[2026-01-08 03:19:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 08:49:07]  *** The last 200 lines of the pilot log: ***
[2026-01-08 08:49:07] 2026-01-08 07:47:58,723 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-08 08:49:07] 2026-01-08 07:48:00,119 | INFO     | monitor loop #1424: job 0:6962016895 is in state 'finished'
[2026-01-08 08:49:07] 2026-01-08 07:48:00,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 08:49:07] 2026-01-08 07:48:00,207 | INFO     | time since job start (19679s) is within the limit (174528.0s)
[2026-01-08 08:49:07] 2026-01-08 07:48:02,213 | INFO     | time since job start (19681s) is within the limit (174528.0s)
[2026-01-08 08:49:07] 2026-01-08 07:48:02,626 | INFO     | monitor loop #1425: job 0:6962016895 is in state 'finished'
[2026-01-08 08:49:07] 2026-01-08 07:48:02,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 08:49:07] 2026-01-08 07:48:02,888 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 08:49:07] 2026-01-08 07:48:02,895 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2443.461875
[2026-01-08 08:49:07] 2026-01-08 07:48:02,904 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6962016895/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 08:49:07] 2026-01-08 07:48:02,905 | INFO     | extracted standard info from prmon json
[2026-01-08 08:49:07] 2026-01-08 07:48:02,905 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 08:49:07] 2026-01-08 07:48:02,905 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 08:49:07] 2026-01-08 07:48:02,905 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 08:49:07] 2026-01-08 07:48:02,905 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 08:49:07] 2026-01-08 07:48:02,913 | INFO     | fitting pss+swap vs Time
[2026-01-08 08:49:07] 2026-01-08 07:48:02,913 | INFO     | sum of square deviations: 10352419220.5
[2026-01-08 08:49:07] 2026-01-08 07:48:02,917 | INFO     | sum of deviations: -51921396016.49999
[2026-01-08 08:49:07] 2026-01-08 07:48:02,917 | INFO     | mean x: 1767848618.5
[2026-01-08 08:49:07] 2026-01-08 07:48:02,917 | INFO     | mean y: 2371190.8291925467
[2026-01-08 08:49:07] 2026-01-08 07:48:02,918 | INFO     | intersect: 8868817406.279856
[2026-01-08 08:49:07] 2026-01-08 07:48:02,918 | INFO     | chi2: 1.6892349394482629
[2026-01-08 08:49:07] 2026-01-08 07:48:02,919 | INFO     | sum of square deviations: 9877610318.0
[2026-01-08 08:49:07] 2026-01-08 07:48:02,922 | INFO     | sum of deviations: -51133139467.999985
[2026-01-08 08:49:07] 2026-01-08 07:48:02,923 | INFO     | mean x: 1767848466.0
[2026-01-08 08:49:07] 2026-01-08 07:48:02,923 | INFO     | mean y: 2371444.022082019
[2026-01-08 08:49:07] 2026-01-08 07:48:02,923 | INFO     | intersect: 9153941435.150358
[2026-01-08 08:49:07] 2026-01-08 07:48:02,923 | INFO     | chi2: 1.68690334703555
[2026-01-08 08:49:07] 2026-01-08 07:48:02,924 | INFO     | current chi2=1.68690334703555 (change=0.1380265325008321 %)
[2026-01-08 08:49:07] 2026-01-08 07:48:02,924 | INFO     | right removable region: 316
[2026-01-08 08:49:07] 2026-01-08 07:48:02,924 | INFO     | sum of square deviations: 9877610318.0
[2026-01-08 08:49:07] 2026-01-08 07:48:02,928 | INFO     | sum of deviations: -91753199898.00002
[2026-01-08 08:49:07] 2026-01-08 07:48:02,928 | INFO     | mean x: 1767848771.0
[2026-01-08 08:49:07] 2026-01-08 07:48:02,928 | INFO     | mean y: 2383868.6940063094
[2026-01-08 08:49:07] 2026-01-08 07:48:02,929 | INFO     | intersect: 16423945000.682434
[2026-01-08 08:49:07] 2026-01-08 07:48:02,929 | INFO     | chi2: 0.33451629034821195
[2026-01-08 08:49:07] 2026-01-08 07:48:02,929 | INFO     | current chi2=0.33451629034821195 (change=80.19717195421784 %)
[2026-01-08 08:49:07] 2026-01-08 07:48:02,930 | INFO     | sum of square deviations: 9417545878.0
[2026-01-08 08:49:07] 2026-01-08 07:48:02,933 | INFO     | sum of deviations: -84420881314.00002
[2026-01-08 08:49:07] 2026-01-08 07:48:02,933 | INFO     | mean x: 1767848923.5
[2026-01-08 08:49:07] 2026-01-08 07:48:02,934 | INFO     | mean y: 2381429.3012820515
[2026-01-08 08:49:07] 2026-01-08 07:48:02,934 | INFO     | intersect: 15849754628.779758
[2026-01-08 08:49:07] 2026-01-08 07:48:02,934 | INFO     | chi2: 0.32757448808419903
[2026-01-08 08:49:07] 2026-01-08 07:48:02,934 | INFO     | current chi2=0.32757448808419903 (change=2.0751761466644596 %)
[2026-01-08 08:49:07] 2026-01-08 07:48:02,935 | INFO     | left removable region: 20
[2026-01-08 08:49:07] 2026-01-08 07:48:02,935 | INFO     | sum of square deviations: 8041713570.0
[2026-01-08 08:49:07] 2026-01-08 07:48:02,938 | INFO     | sum of deviations: -61165765273.500015
[2026-01-08 08:49:07] 2026-01-08 07:48:02,938 | INFO     | mean x: 1767849045.5
[2026-01-08 08:49:07] 2026-01-08 07:48:02,939 | INFO     | mean y: 2374064.0777027025
[2026-01-08 08:49:07] 2026-01-08 07:48:02,939 | INFO     | intersect: 13448742032.146732
[2026-01-08 08:49:07] 2026-01-08 07:48:02,939 | INFO     | chi2: 0.28387093117004353
[2026-01-08 08:49:07] 2026-01-08 07:48:02,940 | INFO     | current memory leak: -7.61 B/s (using 296 data points, chi2=0.28)
[2026-01-08 08:49:07] 2026-01-08 07:48:02,940 | INFO     | could have reported an average CPU frequency of 2540 MHz (14 samples)
[2026-01-08 08:49:07] 2026-01-08 07:48:02,940 | INFO     | ..............................
[2026-01-08 08:49:07] 2026-01-08 07:48:02,941 | INFO     | . Timing measurements:
[2026-01-08 08:49:07] 2026-01-08 07:48:02,941 | INFO     | . get job = 0 s
[2026-01-08 08:49:07] 2026-01-08 07:48:02,941 | INFO     | . initial setup = 1 s
[2026-01-08 08:49:07] 2026-01-08 07:48:02,941 | INFO     | . payload setup = 6 s
[2026-01-08 08:49:07] 2026-01-08 07:48:02,941 | INFO     | . stage-in = 0 s
[2026-01-08 08:49:07] 2026-01-08 07:48:02,941 | INFO     | . payload execution = 19645 s
[2026-01-08 08:49:07] 2026-01-08 07:48:02,941 | INFO     | . stage-out = 1 s
[2026-01-08 08:49:07] 2026-01-08 07:48:02,941 | INFO     | . log creation = 0 s
[2026-01-08 08:49:07] 2026-01-08 07:48:02,941 | INFO     | ..............................
[2026-01-08 08:49:07] 2026-01-08 07:48:03,056 | INFO     | 
[2026-01-08 08:49:07] 2026-01-08 07:48:03,056 | INFO     | job summary report
[2026-01-08 08:49:07] 2026-01-08 07:48:03,056 | INFO     | --------------------------------------------------
[2026-01-08 08:49:07] 2026-01-08 07:48:03,056 | INFO     | PanDA job id: 6962016895
[2026-01-08 08:49:07] 2026-01-08 07:48:03,057 | INFO     | task id: 47898826
[2026-01-08 08:49:07] 2026-01-08 07:48:03,057 | INFO     | errors: (none)
[2026-01-08 08:49:07] 2026-01-08 07:48:03,057 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 08:49:07] 2026-01-08 07:48:03,057 | INFO     | pilot state: finished 
[2026-01-08 08:49:07] 2026-01-08 07:48:03,057 | INFO     | transexitcode: 0
[2026-01-08 08:49:07] 2026-01-08 07:48:03,057 | INFO     | exeerrorcode: 0
[2026-01-08 08:49:07] 2026-01-08 07:48:03,057 | INFO     | exeerrordiag: 
[2026-01-08 08:49:07] 2026-01-08 07:48:03,058 | INFO     | exitcode: 0
[2026-01-08 08:49:07] 2026-01-08 07:48:03,058 | INFO     | exitmsg: OK
[2026-01-08 08:49:07] 2026-01-08 07:48:03,058 | INFO     | cpuconsumptiontime: 76228 s
[2026-01-08 08:49:07] 2026-01-08 07:48:03,058 | INFO     | nevents: 400
[2026-01-08 08:49:07] 2026-01-08 07:48:03,058 | INFO     | neventsw: 0
[2026-01-08 08:49:07] 2026-01-08 07:48:03,058 | INFO     | pid: 1551070
[2026-01-08 08:49:07] 2026-01-08 07:48:03,058 | INFO     | pgrp: 1551070
[2026-01-08 08:49:07] 2026-01-08 07:48:03,058 | INFO     | corecount: 4
[2026-01-08 08:49:07] 2026-01-08 07:48:03,059 | INFO     | event service: False
[2026-01-08 08:49:07] 2026-01-08 07:48:03,059 | INFO     | sizes: {0: 2283975, 1: 2283975, 5: 2284265, 11: 2284321, 19655: 2317357, 19657: 2326377, 19659: 2326561, 19666: 2326755}
[2026-01-08 08:49:07] 2026-01-08 07:48:03,059 | INFO     | --------------------------------------------------
[2026-01-08 08:49:07] 2026-01-08 07:48:03,059 | INFO     | 
[2026-01-08 08:49:07] 2026-01-08 07:48:03,059 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-01-08 08:49:07] 2026-01-08 07:48:03,081 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,081 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,082 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,082 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,084 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,084 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,084 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 08:49:07] 2026-01-08 07:48:03,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,084 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 08:49:07] 2026-01-08 07:48:03,084 | INFO     | job 6962016895 has completed (purged errors)
[2026-01-08 08:49:07] 2026-01-08 07:48:03,085 | INFO     | overall cleanup function is called
[2026-01-08 08:49:07] 2026-01-08 07:48:04,090 | INFO     | --- collectZombieJob: --- 10, [1551070]
[2026-01-08 08:49:07] 2026-01-08 07:48:04,090 | INFO     | zombie collector waiting for pid 1551070
[2026-01-08 08:49:07] 2026-01-08 07:48:04,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 08:49:07] 2026-01-08 07:48:04,091 | INFO     | collected zombie processes
[2026-01-08 08:49:07] 2026-01-08 07:48:04,091 | INFO     | will attempt to kill all subprocesses of pid=1551070
[2026-01-08 08:49:07] 2026-01-08 07:48:04,440 | INFO     | process IDs to be killed: [1551070] (in reverse order)
[2026-01-08 08:49:07] 2026-01-08 07:48:04,527 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 08:49:07] 2026-01-08 07:48:04,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 08:49:07] 2026-01-08 07:48:04,537 | INFO     | did not find any defunct processes belonging to 1551070
[2026-01-08 08:49:07] 2026-01-08 07:48:04,548 | INFO     | did not find any defunct processes belonging to 1551070
[2026-01-08 08:49:07] 2026-01-08 07:48:04,549 | INFO     | ready for new job
[2026-01-08 08:49:07] 2026-01-08 07:48:04,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 08:49:07] 2026-01-08 07:48:04,551 | INFO     | ***************************************
[2026-01-08 08:49:07] 2026-01-08 07:48:04,552 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 08:49:07] 2026-01-08 07:48:04,552 | INFO     | ***************************************
[2026-01-08 08:49:07] 2026-01-08 07:48:04,552 | INFO     | 
[2026-01-08 08:49:07] 2026-01-08 07:48:04,555 | INFO     | architecture information:
[2026-01-08 08:49:07] 2026-01-08 07:48:04,555 | INFO     | executing command: cat /etc/os-release
[2026-01-08 08:49:07] 2026-01-08 07:48:04,570 | INFO     | cat /etc/os-release:
[2026-01-08 08:49:07] NAME="CentOS Linux"
[2026-01-08 08:49:07] VERSION="7 (Core)"
[2026-01-08 08:49:07] ID="centos"
[2026-01-08 08:49:07] ID_LIKE="rhel fedora"
[2026-01-08 08:49:07] VERSION_ID="7"
[2026-01-08 08:49:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 08:49:07] ANSI_COLOR="0;31"
[2026-01-08 08:49:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 08:49:07] HOME_URL="https://www.centos.org/"
[2026-01-08 08:49:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 08:49:07] 
[2026-01-08 08:49:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 08:49:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 08:49:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 08:49:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 08:49:07] 
[2026-01-08 08:49:07] 2026-01-08 07:48:04,571 | INFO     | ***************************************
[2026-01-08 08:49:07] 2026-01-08 07:48:05,074 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-08 08:49:07] 2026-01-08 07:48:05,092 | INFO     | sufficient remaining disk space (1665573847040 B)
[2026-01-08 08:49:07] 2026-01-08 07:48:05,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 08:49:07] 2026-01-08 07:48:05,092 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 08:49:07] 2026-01-08 07:48:05,093 | INFO     | update_server=False
[2026-01-08 08:49:07] 2026-01-08 07:48:05,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 08:49:07] 2026-01-08 07:48:05,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 08:49:07] 2026-01-08 07:48:05,094 | INFO     | all data control threads have been joined
[2026-01-08 08:49:07] 2026-01-08 07:48:05,129 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-08 08:49:07] 2026-01-08 07:48:05,130 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-08 08:49:07] 2026-01-08 07:48:05,130 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:49:07] 2026-01-08 07:48:05,130 | INFO     | will abort loop
[2026-01-08 08:49:07] 2026-01-08 07:48:05,475 | INFO     | all job control threads have been joined
[2026-01-08 08:49:07] 2026-01-08 07:48:05,645 | INFO     | all payload control threads have been joined
[2026-01-08 08:49:07] 2026-01-08 07:48:06,098 | INFO     | [job] retrieve thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:06,100 | INFO     | [data] control thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:06,136 | INFO     | [job] job monitor thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:06,249 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:06,479 | INFO     | [job] control thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:06,637 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:06,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 08:49:07] 2026-01-08 07:48:06,650 | INFO     | [payload] control thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:06,938 | INFO     | [data] copytool_in thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:07,098 | INFO     | [data] copytool_out thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:07,217 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:07,237 | INFO     | [job] validate thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:07,460 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:07,579 | INFO     | [payload] failed_post thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:07,644 | INFO     | [payload] validate_post thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:08,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:49:07] 2026-01-08 07:48:09,070 | INFO     | [job] queue monitor thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:10,656 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 08:49:07] 2026-01-08 07:48:33,830 | INFO     | [monitor] cgroup control has ended
[2026-01-08 08:49:07] 2026-01-08 07:48:35,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23132945430336)>', '<ExcThread(monitor, started 23132702201600)>']
[2026-01-08 08:49:07] 2026-01-08 07:48:35,692 | INFO     | PID=1543854 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 08:49:07] 2026-01-08 07:48:35,692 | INFO     | .. there are 3 such processes running
[2026-01-08 08:49:07] 2026-01-08 07:48:35,693 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 08:49:07] 2026-01-08 07:48:35,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 08:49:07] 2026-01-08 07:48:35,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 08:49:07] 2026-01-08 07:48:35,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 08:49:07] 2026-01-08 07:48:35,693 | INFO     | [monitor] control thread has ended
[2026-01-08 08:49:07] 2026-01-08 07:48:40,163 | INFO     | all workflow threads have been joined
[2026-01-08 08:49:07] 2026-01-08 07:48:40,163 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 08:49:07] 2026-01-08 07:48:40,164 | INFO     | traces error code: 0
[2026-01-08 08:49:07] 2026-01-08 07:48:40,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 08:49:07] 2026-01-08 07:48:40,330 [wrapper] ==== pilot stdout END ====
[2026-01-08 08:49:07] 2026-01-08 07:48:40,333 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 08:49:07] 2026-01-08 07:48:40,336 [wrapper] pilotpid: 1543854
[2026-01-08 08:49:07] 2026-01-08 07:48:40,339 [wrapper] Pilot exit status: 0
[2026-01-08 08:49:07] 2026-01-08 07:48:40,350 [wrapper] pandaids: 6962016895 6962016895
[2026-01-08 08:49:07] 2026-01-08 07:48:40,410 [wrapper] cleanup supervisor_pilot 1757918 1543855
[2026-01-08 08:49:07] 2026-01-08 07:48:40,413 [wrapper] Test setup, not cleaning
[2026-01-08 08:49:07] 2026-01-08 07:48:40,416 [wrapper] apfmon messages muted
[2026-01-08 08:49:07] 2026-01-08 07:48:40,419 [wrapper] ==== wrapper stdout END ====
[2026-01-08 08:49:07] 2026-01-08 07:48:40,421 [wrapper] ==== wrapper stderr END ====
[2026-01-08 08:49:07]  *** Error codes and diagnostics ***
[2026-01-08 08:49:07]     "exeErrorCode": 0,
[2026-01-08 08:49:07]     "exeErrorDiag": "",
[2026-01-08 08:49:07]     "pilotErrorCode": 0,
[2026-01-08 08:49:07]     "pilotErrorDiag": "",
[2026-01-08 08:49:07]  *** Listing of results directory ***
[2026-01-08 08:49:07] total 668828
[2026-01-08 08:49:07] drwx------ 5 boinc boinc      4096 Dec  3 15:30 pilot3
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc    579449 Jan  7 16:25 pilot3.tar.gz
[2026-01-08 08:49:07] -rwx------ 1 boinc boinc     36322 Jan  7 16:33 runpilot2-wrapper.sh
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc      5112 Jan  7 16:36 queuedata.json
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc       100 Jan  7 23:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 08:49:07] -rwxr-xr-x 1 boinc boinc      7986 Jan  7 23:14 run_atlas
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc       105 Jan  7 23:14 job.xml
[2026-01-08 08:49:07] -rw-r--r-- 3 boinc boinc 223373966 Jan  7 23:15 EVNT.47898824._000486.pool.root.1
[2026-01-08 08:49:07] -rw-r--r-- 3 boinc boinc 223373966 Jan  7 23:15 ATLAS.root_0
[2026-01-08 08:49:07] -rw-r--r-- 2 boinc boinc     15847 Jan  7 23:15 start_atlas.sh
[2026-01-08 08:49:07] drwxrwx--x 2 boinc boinc      4096 Jan  7 23:15 shared
[2026-01-08 08:49:07] -rw-r--r-- 2 boinc boinc    592394 Jan  7 23:15 input.tar.gz
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc         0 Jan  7 23:15 boinc_lockfile
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc      2516 Jan  8 03:19 pandaJob.out
[2026-01-08 08:49:07] -rw------- 1 boinc boinc    989843 Jan  8 03:20 agis_schedconf.cvmfs.json
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc      6430 Jan  8 05:16 init_data.xml
[2026-01-08 08:49:07] -rw------- 1 boinc boinc 227710628 Jan  8 08:47 HITS.47898826._009577.pool.root.1
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc       530 Jan  8 08:47 boinc_task_state.xml
[2026-01-08 08:49:07] -rw------- 1 boinc boinc        96 Jan  8 08:47 pilot_heartbeat.json
[2026-01-08 08:49:07] -rw------- 1 boinc boinc      1034 Jan  8 08:47 memory_monitor_summary.json
[2026-01-08 08:49:07] -rw------- 1 boinc boinc   1516240 Jan  8 08:47 agis_ddmendpoints.agis.ALL.json
[2026-01-08 08:49:07] -rw------- 1 boinc boinc    490493 Jan  8 08:47 log.47898826._009577.job.log.tgz.1
[2026-01-08 08:49:07] -rw------- 1 boinc boinc      7842 Jan  8 08:48 heartbeat.json
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc        27 Jan  8 08:48 wrapper_checkpoint.txt
[2026-01-08 08:49:07] -rw------- 1 boinc boinc      5020 Jan  8 08:48 pilotlog.txt
[2026-01-08 08:49:07] -rw------- 1 boinc boinc   2763824 Jan  8 08:48 log.47898826._009577.job.log.1
[2026-01-08 08:49:07] -rw------- 1 boinc boinc       357 Jan  8 08:48 output.list
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc       620 Jan  8 08:48 runtime_log
[2026-01-08 08:49:07] -rw------- 1 boinc boinc   3276800 Jan  8 08:48 result.tar.gz
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc      9283 Jan  8 08:48 runtime_log.err
[2026-01-08 08:49:07] -rw------- 1 boinc boinc       791 Jan  8 08:48 T1qMDmbikx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSKiKDmqWVaUn.diag
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc      8192 Jan  8 08:49 boinc_mmap_file
[2026-01-08 08:49:07] -rw-r--r-- 1 boinc boinc     23132 Jan  8 08:49 stderr.txt
[2026-01-08 08:49:07] HITS file was successfully produced:
[2026-01-08 08:49:07] -rw------- 1 boinc boinc 227710628 Jan  8 08:47 shared/HITS.pool.root.1
[2026-01-08 08:49:07]  *** Contents of shared directory: ***
[2026-01-08 08:49:07] total 444316
[2026-01-08 08:49:07] -rw-r--r-- 3 boinc boinc 223373966 Jan  7 23:15 ATLAS.root_0
[2026-01-08 08:49:07] -rw-r--r-- 2 boinc boinc     15847 Jan  7 23:15 start_atlas.sh
[2026-01-08 08:49:07] -rw-r--r-- 2 boinc boinc    592394 Jan  7 23:15 input.tar.gz
[2026-01-08 08:49:07] -rw------- 1 boinc boinc 227710628 Jan  8 08:47 HITS.pool.root.1
[2026-01-08 08:49:07] -rw------- 1 boinc boinc   3276800 Jan  8 08:48 result.tar.gz
08:49:09 (1540189): run_atlas exited; CPU time 77029.254448
08:49:09 (1540189): called boinc_finish(0)

</stderr_txt>
]]>

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