Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:18:18 (17573): wrapper (7.7.26015): starting
21:18:18 (17573): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 21:18:18] Arguments: --nthreads 8
[2026-01-07 21:18:18] Threads: 8
[2026-01-07 21:18:18] Checking for CVMFS
[2026-01-07 21:18:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 21:18:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 21:18:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 21:18:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 21:18:21] 2.11.2.0 898 32988 99044 154878 0 100 18160461 25165824 1034 130560 0 13527331 99.802 12552326 3887 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-07 21:18:21] CVMFS is ok
[2026-01-07 21:18:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 21:18:21] Checking for apptainer binary...
[2026-01-07 21:18:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 21:18:21] Running /usr/bin/apptainer --version
[2026-01-07 21:18:21] apptainer version 1.3.2-1.el7
[2026-01-07 21:18:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 21:18:36] cg-vwn390.simple-grid.lan
[2026-01-07 21:18:36] apptainer works
[2026-01-07 21:18:36] Set ATHENA_PROC_NUMBER=8
[2026-01-07 21:18:36] Set ATHENA_CORE_NUMBER=8
[2026-01-07 21:18:36] Starting ATLAS job with PandaID=6962017054
[2026-01-07 21:18:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 02:35:37]  *** The last 200 lines of the pilot log: ***
[2026-01-08 02:35:37] 2026-01-08 01:34:42,750 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 02:35:37] 2026-01-08 01:34:42,751 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 02:35:37] 2026-01-08 01:34:42,753 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6962017054/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 02:35:37] 2026-01-08 01:34:42,754 | INFO     | extracted standard info from prmon json
[2026-01-08 02:35:37] 2026-01-08 01:34:42,754 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 02:35:37] 2026-01-08 01:34:42,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 02:35:37] 2026-01-08 01:34:42,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 02:35:37] 2026-01-08 01:34:42,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 02:35:37] 2026-01-08 01:34:42,761 | INFO     | fitting pss+swap vs Time
[2026-01-08 02:35:37] 2026-01-08 01:34:42,762 | INFO     | sum of square deviations: 8041713570.0
[2026-01-08 02:35:37] 2026-01-08 01:34:42,765 | INFO     | sum of deviations: 121839941825.5
[2026-01-08 02:35:37] 2026-01-08 01:34:42,765 | INFO     | mean x: 1767826913.5
[2026-01-08 02:35:37] 2026-01-08 01:34:42,765 | INFO     | mean y: 2450023.4155405406
[2026-01-08 02:35:37] 2026-01-08 01:34:42,766 | INFO     | intersect: -26781882248.99008
[2026-01-08 02:35:37] 2026-01-08 01:34:42,766 | INFO     | chi2: 8.084822189819175
[2026-01-08 02:35:37] 2026-01-08 01:34:42,767 | INFO     | sum of square deviations: 7641036290.0
[2026-01-08 02:35:37] 2026-01-08 01:34:42,770 | INFO     | sum of deviations: 139411023636.99997
[2026-01-08 02:35:37] 2026-01-08 01:34:42,770 | INFO     | mean x: 1767826761.0
[2026-01-08 02:35:37] 2026-01-08 01:34:42,770 | INFO     | mean y: 2456608.5498281787
[2026-01-08 02:35:37] 2026-01-08 01:34:42,770 | INFO     | intersect: -32251615877.198322
[2026-01-08 02:35:37] 2026-01-08 01:34:42,771 | INFO     | chi2: 7.3717753867366635
[2026-01-08 02:35:37] 2026-01-08 01:34:42,771 | INFO     | current chi2=7.3717753867366635 (change=8.819573100573768 %)
[2026-01-08 02:35:37] 2026-01-08 01:34:42,771 | INFO     | right removable region: 290
[2026-01-08 02:35:37] 2026-01-08 01:34:42,772 | INFO     | sum of square deviations: 7641036290.0
[2026-01-08 02:35:37] 2026-01-08 01:34:42,775 | INFO     | sum of deviations: 21025380570.000008
[2026-01-08 02:35:37] 2026-01-08 01:34:42,775 | INFO     | mean x: 1767827066.0
[2026-01-08 02:35:37] 2026-01-08 01:34:42,775 | INFO     | mean y: 2488369.3127147765
[2026-01-08 02:35:37] 2026-01-08 01:34:42,775 | INFO     | intersect: -4861935176.645411
[2026-01-08 02:35:37] 2026-01-08 01:34:42,776 | INFO     | chi2: 3.4139501469063074
[2026-01-08 02:35:37] 2026-01-08 01:34:42,776 | INFO     | current chi2=3.4139501469063074 (change=57.773342854647694 %)
[2026-01-08 02:35:37] 2026-01-08 01:34:42,777 | INFO     | sum of square deviations: 7253894147.5
[2026-01-08 02:35:37] 2026-01-08 01:34:42,780 | INFO     | sum of deviations: -51226880516.5
[2026-01-08 02:35:37] 2026-01-08 01:34:42,780 | INFO     | mean x: 1767827218.5
[2026-01-08 02:35:37] 2026-01-08 01:34:42,780 | INFO     | mean y: 2516780.1293706293
[2026-01-08 02:35:37] 2026-01-08 01:34:42,780 | INFO     | intersect: 12486883363.714954
[2026-01-08 02:35:37] 2026-01-08 01:34:42,781 | INFO     | chi2: 1.0773569891407413
[2026-01-08 02:35:37] 2026-01-08 01:34:42,781 | INFO     | current chi2=1.0773569891407413 (change=68.44250962138292 %)
[2026-01-08 02:35:37] 2026-01-08 01:34:42,781 | INFO     | sum of square deviations: 6880054580.0
[2026-01-08 02:35:37] 2026-01-08 01:34:42,784 | INFO     | sum of deviations: -61391809771.0
[2026-01-08 02:35:37] 2026-01-08 01:34:42,784 | INFO     | mean x: 1767827371.0
[2026-01-08 02:35:37] 2026-01-08 01:34:42,785 | INFO     | mean y: 2520899.334519573
[2026-01-08 02:35:37] 2026-01-08 01:34:42,785 | INFO     | intersect: 15777122743.902887
[2026-01-08 02:35:37] 2026-01-08 01:34:42,785 | INFO     | chi2: 0.9891939633259625
[2026-01-08 02:35:37] 2026-01-08 01:34:42,785 | INFO     | current chi2=0.9891939633259625 (change=8.183269492231558 %)
[2026-01-08 02:35:37] 2026-01-08 01:34:42,786 | INFO     | left removable region: 30
[2026-01-08 02:35:37] 2026-01-08 01:34:42,786 | INFO     | sum of square deviations: 5449944045.0
[2026-01-08 02:35:37] 2026-01-08 01:34:42,789 | INFO     | sum of deviations: -16424180856.500002
[2026-01-08 02:35:37] 2026-01-08 01:34:42,789 | INFO     | mean x: 1767827645.5
[2026-01-08 02:35:37] 2026-01-08 01:34:42,789 | INFO     | mean y: 2517649.0115384613
[2026-01-08 02:35:37] 2026-01-08 01:34:42,789 | INFO     | intersect: 5330117479.958532
[2026-01-08 02:35:37] 2026-01-08 01:34:42,790 | INFO     | chi2: 0.13918464324675273
[2026-01-08 02:35:37] 2026-01-08 01:34:42,790 | INFO     | current memory leak: -3.01 B/s (using 260 data points, chi2=0.14)
[2026-01-08 02:35:37] 2026-01-08 01:34:42,791 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-08 02:35:37] 2026-01-08 01:34:42,791 | INFO     | ..............................
[2026-01-08 02:35:37] 2026-01-08 01:34:42,791 | INFO     | . Timing measurements:
[2026-01-08 02:35:37] 2026-01-08 01:34:42,791 | INFO     | . get job = 0 s
[2026-01-08 02:35:37] 2026-01-08 01:34:42,791 | INFO     | . initial setup = 11 s
[2026-01-08 02:35:37] 2026-01-08 01:34:42,791 | INFO     | . payload setup = 141 s
[2026-01-08 02:35:37] 2026-01-08 01:34:42,791 | INFO     | . stage-in = 0 s
[2026-01-08 02:35:37] 2026-01-08 01:34:42,791 | INFO     | . payload execution = 18250 s
[2026-01-08 02:35:37] 2026-01-08 01:34:42,792 | INFO     | . stage-out = 5 s
[2026-01-08 02:35:37] 2026-01-08 01:34:42,792 | INFO     | . log creation = 1 s
[2026-01-08 02:35:37] 2026-01-08 01:34:42,792 | INFO     | ..............................
[2026-01-08 02:35:37] 2026-01-08 01:34:42,908 | INFO     | time since job start (18709s) is within the limit (174528.0s)
[2026-01-08 02:35:37] 2026-01-08 01:34:43,141 | INFO     | 
[2026-01-08 02:35:37] 2026-01-08 01:34:43,141 | INFO     | job summary report
[2026-01-08 02:35:37] 2026-01-08 01:34:43,141 | INFO     | --------------------------------------------------
[2026-01-08 02:35:37] 2026-01-08 01:34:43,141 | INFO     | PanDA job id: 6962017054
[2026-01-08 02:35:37] 2026-01-08 01:34:43,142 | INFO     | task id: 47898826
[2026-01-08 02:35:37] 2026-01-08 01:34:43,142 | INFO     | errors: (none)
[2026-01-08 02:35:37] 2026-01-08 01:34:43,142 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 02:35:37] 2026-01-08 01:34:43,142 | INFO     | pilot state: finished 
[2026-01-08 02:35:37] 2026-01-08 01:34:43,142 | INFO     | transexitcode: 0
[2026-01-08 02:35:37] 2026-01-08 01:34:43,142 | INFO     | exeerrorcode: 0
[2026-01-08 02:35:37] 2026-01-08 01:34:43,142 | INFO     | exeerrordiag: 
[2026-01-08 02:35:37] 2026-01-08 01:34:43,142 | INFO     | exitcode: 0
[2026-01-08 02:35:37] 2026-01-08 01:34:43,142 | INFO     | exitmsg: OK
[2026-01-08 02:35:37] 2026-01-08 01:34:43,143 | INFO     | cpuconsumptiontime: 80342 s
[2026-01-08 02:35:37] 2026-01-08 01:34:43,143 | INFO     | nevents: 400
[2026-01-08 02:35:37] 2026-01-08 01:34:43,143 | INFO     | neventsw: 0
[2026-01-08 02:35:37] 2026-01-08 01:34:43,143 | INFO     | pid: 27830
[2026-01-08 02:35:37] 2026-01-08 01:34:43,143 | INFO     | pgrp: 27830
[2026-01-08 02:35:37] 2026-01-08 01:34:43,143 | INFO     | corecount: 8
[2026-01-08 02:35:37] 2026-01-08 01:34:43,143 | INFO     | event service: False
[2026-01-08 02:35:37] 2026-01-08 01:34:43,143 | INFO     | sizes: {0: 2283793, 1: 2283992, 12: 2283992, 23: 2284020, 33: 2284048, 44: 2284104, 55: 2284260, 66: 2284288, 77: 2284316, 87: 2284372, 97: 2284662, 98: 2284970, 1
[2026-01-08 02:35:37] 2026-01-08 01:34:43,143 | INFO     | --------------------------------------------------
[2026-01-08 02:35:37] 2026-01-08 01:34:43,144 | INFO     | 
[2026-01-08 02:35:37] 2026-01-08 01:34:43,144 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-08 02:35:37] 2026-01-08 01:34:43,180 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,180 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,180 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,180 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,181 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,182 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 02:35:37] 2026-01-08 01:34:43,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,182 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 02:35:37] 2026-01-08 01:34:43,182 | INFO     | job 6962017054 has completed (purged errors)
[2026-01-08 02:35:37] 2026-01-08 01:34:43,183 | INFO     | overall cleanup function is called
[2026-01-08 02:35:37] 2026-01-08 01:34:44,191 | INFO     | --- collectZombieJob: --- 10, [27830]
[2026-01-08 02:35:37] 2026-01-08 01:34:44,192 | INFO     | zombie collector waiting for pid 27830
[2026-01-08 02:35:37] 2026-01-08 01:34:44,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 02:35:37] 2026-01-08 01:34:44,192 | INFO     | collected zombie processes
[2026-01-08 02:35:37] 2026-01-08 01:34:44,192 | INFO     | will attempt to kill all subprocesses of pid=27830
[2026-01-08 02:35:37] 2026-01-08 01:34:44,273 | INFO     | process IDs to be killed: [27830] (in reverse order)
[2026-01-08 02:35:37] 2026-01-08 01:34:44,506 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 02:35:37] 2026-01-08 01:34:44,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 02:35:37] 2026-01-08 01:34:44,509 | INFO     | did not find any defunct processes belonging to 27830
[2026-01-08 02:35:37] 2026-01-08 01:34:44,511 | INFO     | did not find any defunct processes belonging to 27830
[2026-01-08 02:35:37] 2026-01-08 01:34:44,511 | INFO     | ready for new job
[2026-01-08 02:35:37] 2026-01-08 01:34:44,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 02:35:37] 2026-01-08 01:34:44,514 | INFO     | ***************************************
[2026-01-08 02:35:37] 2026-01-08 01:34:44,514 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 02:35:37] 2026-01-08 01:34:44,514 | INFO     | ***************************************
[2026-01-08 02:35:37] 2026-01-08 01:34:44,514 | INFO     | 
[2026-01-08 02:35:37] 2026-01-08 01:34:44,515 | INFO     | pilot is running in a VM
[2026-01-08 02:35:37] 2026-01-08 01:34:44,515 | INFO     | architecture information:
[2026-01-08 02:35:37] 2026-01-08 01:34:44,516 | INFO     | executing command: cat /etc/os-release
[2026-01-08 02:35:37] 2026-01-08 01:34:44,606 | INFO     | cat /etc/os-release:
[2026-01-08 02:35:37] NAME="CentOS Linux"
[2026-01-08 02:35:37] VERSION="7 (Core)"
[2026-01-08 02:35:37] ID="centos"
[2026-01-08 02:35:37] ID_LIKE="rhel fedora"
[2026-01-08 02:35:37] VERSION_ID="7"
[2026-01-08 02:35:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 02:35:37] ANSI_COLOR="0;31"
[2026-01-08 02:35:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 02:35:37] HOME_URL="https://www.centos.org/"
[2026-01-08 02:35:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 02:35:37] 
[2026-01-08 02:35:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 02:35:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 02:35:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 02:35:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 02:35:37] 
[2026-01-08 02:35:37] 2026-01-08 01:34:44,606 | INFO     | ***************************************
[2026-01-08 02:35:37] 2026-01-08 01:34:45,110 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-08 02:35:37] 2026-01-08 01:34:45,311 | INFO     | sufficient remaining disk space (498046337024 B)
[2026-01-08 02:35:37] 2026-01-08 01:34:45,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 02:35:37] 2026-01-08 01:34:45,312 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 02:35:37] 2026-01-08 01:34:45,312 | INFO     | update_server=False
[2026-01-08 02:35:37] 2026-01-08 01:34:45,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 02:35:37] 2026-01-08 01:34:45,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 02:35:37] 2026-01-08 01:34:45,315 | INFO     | aborting loop
[2026-01-08 02:35:37] 2026-01-08 01:34:45,378 | INFO     | all data control threads have been joined
[2026-01-08 02:35:37] 2026-01-08 01:34:45,777 | INFO     | all job control threads have been joined
[2026-01-08 02:35:37] 2026-01-08 01:34:46,275 | INFO     | all payload control threads have been joined
[2026-01-08 02:35:37] 2026-01-08 01:34:46,318 | INFO     | [job] retrieve thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:46,321 | INFO     | [job] job monitor thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:46,379 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:46,384 | INFO     | [data] control thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:46,608 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:46,655 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:46,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 02:35:37] 2026-01-08 01:34:46,783 | INFO     | [job] control thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:47,158 | INFO     | [data] copytool_in thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:47,162 | INFO     | [job] validate thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:47,281 | INFO     | [payload] control thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:47,332 | INFO     | [payload] validate_post thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:47,333 | INFO     | [payload] failed_post thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:47,347 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:48,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 02:35:37] 2026-01-08 01:34:48,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 02:35:37] 2026-01-08 01:34:48,688 | INFO     | [data] copytool_out thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:49,161 | INFO     | [job] queue monitor thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:34:52,120 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 02:35:37] 2026-01-08 01:35:16,118 | INFO     | PID=21318 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 02:35:37] 2026-01-08 01:35:16,118 | INFO     | .. there are 2 such processes running
[2026-01-08 02:35:37] 2026-01-08 01:35:16,118 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 02:35:37] 2026-01-08 01:35:16,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 02:35:37] 2026-01-08 01:35:16,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 02:35:37] 2026-01-08 01:35:25,335 | INFO     | [monitor] cgroup control has ended
[2026-01-08 02:35:37] 2026-01-08 01:35:26,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564919506752)>', '<ExcThread(monitor, started 140564204873472)>']
[2026-01-08 02:35:37] 2026-01-08 01:35:27,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 02:35:37] 2026-01-08 01:35:27,185 | INFO     | [monitor] control thread has ended
[2026-01-08 02:35:37] 2026-01-08 01:35:31,272 | INFO     | all workflow threads have been joined
[2026-01-08 02:35:37] 2026-01-08 01:35:31,273 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 02:35:37] 2026-01-08 01:35:31,273 | INFO     | traces error code: 0
[2026-01-08 02:35:37] 2026-01-08 01:35:31,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 02:35:37] 2026-01-08 01:35:31,912 [wrapper] ==== pilot stdout END ====
[2026-01-08 02:35:37] 2026-01-08 01:35:32,033 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 02:35:37] 2026-01-08 01:35:32,125 [wrapper] pilotpid: 21318
[2026-01-08 02:35:37] 2026-01-08 01:35:32,252 [wrapper] Pilot exit status: 0
[2026-01-08 02:35:37] 2026-01-08 01:35:32,759 [wrapper] pandaids: 6962017054
[2026-01-08 02:35:37] 2026-01-08 01:35:33,528 [wrapper] cleanup supervisor_pilot  4281 21319
[2026-01-08 02:35:37] 2026-01-08 01:35:33,628 [wrapper] Test setup, not cleaning
[2026-01-08 02:35:37] 2026-01-08 01:35:33,699 [wrapper] apfmon messages muted
[2026-01-08 02:35:37] 2026-01-08 01:35:33,781 [wrapper] ==== wrapper stdout END ====
[2026-01-08 02:35:37] 2026-01-08 01:35:33,892 [wrapper] ==== wrapper stderr END ====
[2026-01-08 02:35:37]  *** Error codes and diagnostics ***
[2026-01-08 02:35:37]     "exeErrorCode": 0,
[2026-01-08 02:35:37]     "exeErrorDiag": "",
[2026-01-08 02:35:37]     "pilotErrorCode": 0,
[2026-01-08 02:35:37]     "pilotErrorDiag": "",
[2026-01-08 02:35:37]  *** Listing of results directory ***
[2026-01-08 02:35:37] total 440972
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc    579449 Jan  7 16:25 pilot3.tar.gz
[2026-01-08 02:35:37] -rwx------. 1 boinc boinc     36322 Jan  7 16:33 runpilot2-wrapper.sh
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc      5112 Jan  7 16:36 queuedata.json
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc       100 Jan  7 21:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 02:35:37] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 21:18 run_atlas
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc       105 Jan  7 21:18 job.xml
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc      6390 Jan  7 21:18 init_data.xml
[2026-01-08 02:35:37] -rw-r--r--. 2 boinc boinc 224441152 Jan  7 21:18 EVNT.47898824._000493.pool.root.1
[2026-01-08 02:35:37] -rw-r--r--. 2 boinc boinc     15847 Jan  7 21:18 start_atlas.sh
[2026-01-08 02:35:37] drwxrwx--x. 2 boinc boinc        68 Jan  7 21:18 shared
[2026-01-08 02:35:37] -rw-r--r--. 2 boinc boinc    592396 Jan  7 21:18 input.tar.gz
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc         0 Jan  7 21:18 boinc_lockfile
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc      2516 Jan  7 21:18 pandaJob.out
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc    989785 Jan  7 21:22 agis_schedconf.cvmfs.json
[2026-01-08 02:35:37] drwx------. 5 boinc boinc      4096 Jan  7 21:22 pilot3
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc 217203487 Jan  8 02:31 HITS.47898826._009736.pool.root.1
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc       531 Jan  8 02:31 boinc_task_state.xml
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc      1021 Jan  8 02:32 memory_monitor_summary.json
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc   1516240 Jan  8 02:32 agis_ddmendpoints.agis.ALL.json
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc    505639 Jan  8 02:33 log.47898826._009736.job.log.tgz.1
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc        95 Jan  8 02:34 pilot_heartbeat.json
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc      7785 Jan  8 02:34 heartbeat.json
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc      8192 Jan  8 02:35 boinc_mmap_file
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc        28 Jan  8 02:35 wrapper_checkpoint.txt
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc      4884 Jan  8 02:35 pilotlog.txt
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc   2499057 Jan  8 02:35 log.47898826._009736.job.log.1
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc       357 Jan  8 02:35 output.list
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc       620 Jan  8 02:35 runtime_log
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc   3020800 Jan  8 02:35 result.tar.gz
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc      8817 Jan  8 02:35 runtime_log.err
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc       657 Jan  8 02:35 lHIODmlikx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfFdKDmN9D0Um.diag
[2026-01-08 02:35:37] -rw-r--r--. 1 boinc boinc     20777 Jan  8 02:35 stderr.txt
[2026-01-08 02:35:37] HITS file was successfully produced:
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc 217203487 Jan  8 02:31 shared/HITS.pool.root.1
[2026-01-08 02:35:37]  *** Contents of shared directory: ***
[2026-01-08 02:35:37] total 434848
[2026-01-08 02:35:37] -rw-r--r--. 2 boinc boinc 224441152 Jan  7 21:18 ATLAS.root_0
[2026-01-08 02:35:37] -rw-r--r--. 2 boinc boinc     15847 Jan  7 21:18 start_atlas.sh
[2026-01-08 02:35:37] -rw-r--r--. 2 boinc boinc    592396 Jan  7 21:18 input.tar.gz
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc 217203487 Jan  8 02:31 HITS.pool.root.1
[2026-01-08 02:35:37] -rw-------. 1 boinc boinc   3020800 Jan  8 02:35 result.tar.gz
02:35:38 (17573): run_atlas exited; CPU time 80527.055834
02:35:38 (17573): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN