Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:32:44 (3091808): wrapper (7.7.26015): starting
04:32:44 (3091808): wrapper: running run_atlas (--nthreads 4)
[2026-01-08 04:32:44] Arguments: --nthreads 4
[2026-01-08 04:32:44] Threads: 4
[2026-01-08 04:32:44] Checking for CVMFS
[2026-01-08 04:32:44] No cvmfs_config command found, will try listing directly
[2026-01-08 04:32:45] CVMFS is ok
[2026-01-08 04:32:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-08 04:32:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-08 04:32:45] Further information can be found at the LHC@home message board.
[2026-01-08 04:32:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-08 04:32:45] Checking for apptainer binary...
[2026-01-08 04:32:45] which: no apptainer in ((null))
[2026-01-08 04:32:45] apptainer is not installed, using version from CVMFS
[2026-01-08 04:32:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-08 04:32:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-01-08 04:32:45] apptainer works
[2026-01-08 04:32:45] Set ATHENA_PROC_NUMBER=4
[2026-01-08 04:32:45] Set ATHENA_CORE_NUMBER=4
[2026-01-08 04:32:45] Starting ATLAS job with PandaID=6962016410
[2026-01-08 04:32:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 10:01:38]  *** The last 200 lines of the pilot log: ***
[2026-01-08 10:01:38] 2026-01-08 08:49:39,861 | INFO     | time since job start (18999s) is within the limit (174528.0s)
[2026-01-08 10:01:38] 2026-01-08 08:49:40,092 | INFO     | monitor loop #1383: job 0:6962016410 is in state 'finished'
[2026-01-08 10:01:38] 2026-01-08 08:49:40,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 10:01:38] 2026-01-08 08:49:41,867 | INFO     | time since job start (19001s) is within the limit (174528.0s)
[2026-01-08 10:01:38] 2026-01-08 08:49:42,595 | INFO     | monitor loop #1384: job 0:6962016410 is in state 'finished'
[2026-01-08 10:01:38] 2026-01-08 08:49:42,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 10:01:38] 2026-01-08 08:49:43,872 | INFO     | time since job start (19003s) is within the limit (174528.0s)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,099 | INFO     | monitor loop #1385: job 0:6962016410 is in state 'finished'
[2026-01-08 10:01:38] 2026-01-08 08:49:45,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,278 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 10:01:38] 2026-01-08 08:49:45,285 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2534.6488
[2026-01-08 10:01:38] 2026-01-08 08:49:45,294 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6962016410/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,295 | INFO     | extracted standard info from prmon json
[2026-01-08 10:01:38] 2026-01-08 08:49:45,295 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 10:01:38] 2026-01-08 08:49:45,295 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 10:01:38] 2026-01-08 08:49:45,295 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 10:01:38] 2026-01-08 08:49:45,296 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 10:01:38] 2026-01-08 08:49:45,302 | INFO     | fitting pss+swap vs Time
[2026-01-08 10:01:38] 2026-01-08 08:49:45,303 | INFO     | sum of square deviations: 9327281860.0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,306 | INFO     | sum of deviations: -49826725221.00001
[2026-01-08 10:01:38] 2026-01-08 08:49:45,306 | INFO     | mean x: 1767852662.0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,306 | INFO     | mean y: 2418582.8745980705
[2026-01-08 10:01:38] 2026-01-08 08:49:45,307 | INFO     | intersect: 9446360573.996906
[2026-01-08 10:01:38] 2026-01-08 08:49:45,307 | INFO     | chi2: 1.7943943330763952
[2026-01-08 10:01:38] 2026-01-08 08:49:45,308 | INFO     | sum of square deviations: 8884603792.5
[2026-01-08 10:01:38] 2026-01-08 08:49:45,311 | INFO     | sum of deviations: -48780926001.49999
[2026-01-08 10:01:38] 2026-01-08 08:49:45,311 | INFO     | mean x: 1767852509.5
[2026-01-08 10:01:38] 2026-01-08 08:49:45,311 | INFO     | mean y: 2418943.179738562
[2026-01-08 10:01:38] 2026-01-08 08:49:45,311 | INFO     | intersect: 9708814913.282934
[2026-01-08 10:01:38] 2026-01-08 08:49:45,312 | INFO     | chi2: 1.7925029535558377
[2026-01-08 10:01:38] 2026-01-08 08:49:45,312 | INFO     | current chi2=1.7925029535558377 (change=0.10540489822629126 %)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,312 | INFO     | right removable region: 305
[2026-01-08 10:01:38] 2026-01-08 08:49:45,313 | INFO     | sum of square deviations: 8884603792.5
[2026-01-08 10:01:38] 2026-01-08 08:49:45,315 | INFO     | sum of deviations: -86190409452.00002
[2026-01-08 10:01:38] 2026-01-08 08:49:45,316 | INFO     | mean x: 1767852814.5
[2026-01-08 10:01:38] 2026-01-08 08:49:45,316 | INFO     | mean y: 2430984.4640522874
[2026-01-08 10:01:38] 2026-01-08 08:49:45,316 | INFO     | intersect: 17152543864.146032
[2026-01-08 10:01:38] 2026-01-08 08:49:45,317 | INFO     | chi2: 0.5040420527219694
[2026-01-08 10:01:38] 2026-01-08 08:49:45,317 | INFO     | current chi2=0.5040420527219694 (change=71.91018476647685 %)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,317 | INFO     | sum of square deviations: 8456158550.0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,320 | INFO     | sum of deviations: -78246895695.00002
[2026-01-08 10:01:38] 2026-01-08 08:49:45,320 | INFO     | mean x: 1767852967.0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,321 | INFO     | mean y: 2428156.684385382
[2026-01-08 10:01:38] 2026-01-08 08:49:45,321 | INFO     | intersect: 16360802458.091648
[2026-01-08 10:01:38] 2026-01-08 08:49:45,321 | INFO     | chi2: 0.49968763895969326
[2026-01-08 10:01:38] 2026-01-08 08:49:45,322 | INFO     | current chi2=0.49968763895969326 (change=0.8638989026334457 %)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,322 | INFO     | left removable region: 20
[2026-01-08 10:01:38] 2026-01-08 08:49:45,322 | INFO     | sum of square deviations: 7178069470.0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,325 | INFO     | sum of deviations: -49693071720.0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,325 | INFO     | mean x: 1767853089.0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,325 | INFO     | mean y: 2418311.712280702
[2026-01-08 10:01:38] 2026-01-08 08:49:45,325 | INFO     | intersect: 12241092053.901703
[2026-01-08 10:01:38] 2026-01-08 08:49:45,326 | INFO     | chi2: 0.4119839909918097
[2026-01-08 10:01:38] 2026-01-08 08:49:45,326 | INFO     | current memory leak: -6.92 B/s (using 285 data points, chi2=0.41)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,327 | INFO     | could have reported an average CPU frequency of 2519 MHz (14 samples)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,327 | INFO     | ..............................
[2026-01-08 10:01:38] 2026-01-08 08:49:45,327 | INFO     | . Timing measurements:
[2026-01-08 10:01:38] 2026-01-08 08:49:45,327 | INFO     | . get job = 0 s
[2026-01-08 10:01:38] 2026-01-08 08:49:45,328 | INFO     | . initial setup = 1 s
[2026-01-08 10:01:38] 2026-01-08 08:49:45,328 | INFO     | . payload setup = 6 s
[2026-01-08 10:01:38] 2026-01-08 08:49:45,328 | INFO     | . stage-in = 0 s
[2026-01-08 10:01:38] 2026-01-08 08:49:45,328 | INFO     | . payload execution = 18967 s
[2026-01-08 10:01:38] 2026-01-08 08:49:45,328 | INFO     | . stage-out = 1 s
[2026-01-08 10:01:38] 2026-01-08 08:49:45,328 | INFO     | . log creation = 0 s
[2026-01-08 10:01:38] 2026-01-08 08:49:45,328 | INFO     | ..............................
[2026-01-08 10:01:38] 2026-01-08 08:49:45,871 | INFO     | 
[2026-01-08 10:01:38] 2026-01-08 08:49:45,872 | INFO     | job summary report
[2026-01-08 10:01:38] 2026-01-08 08:49:45,872 | INFO     | --------------------------------------------------
[2026-01-08 10:01:38] 2026-01-08 08:49:45,872 | INFO     | PanDA job id: 6962016410
[2026-01-08 10:01:38] 2026-01-08 08:49:45,872 | INFO     | task id: 47898826
[2026-01-08 10:01:38] 2026-01-08 08:49:45,872 | INFO     | errors: (none)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,872 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 10:01:38] 2026-01-08 08:49:45,872 | INFO     | pilot state: finished 
[2026-01-08 10:01:38] 2026-01-08 08:49:45,873 | INFO     | transexitcode: 0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,873 | INFO     | exeerrorcode: 0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,873 | INFO     | exeerrordiag: 
[2026-01-08 10:01:38] 2026-01-08 08:49:45,873 | INFO     | exitcode: 0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,873 | INFO     | exitmsg: OK
[2026-01-08 10:01:38] 2026-01-08 08:49:45,873 | INFO     | cpuconsumptiontime: 72639 s
[2026-01-08 10:01:38] 2026-01-08 08:49:45,873 | INFO     | nevents: 400
[2026-01-08 10:01:38] 2026-01-08 08:49:45,873 | INFO     | neventsw: 0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,873 | INFO     | pid: 3103299
[2026-01-08 10:01:38] 2026-01-08 08:49:45,874 | INFO     | pgrp: 3103299
[2026-01-08 10:01:38] 2026-01-08 08:49:45,874 | INFO     | corecount: 4
[2026-01-08 10:01:38] 2026-01-08 08:49:45,874 | INFO     | event service: False
[2026-01-08 10:01:38] 2026-01-08 08:49:45,874 | INFO     | sizes: {0: 2283748, 1: 2284003, 2: 2284003, 6: 2284293, 12: 2284321, 18978: 2317029, 18979: 2326049, 18981: 2326105, 18989: 2326299}
[2026-01-08 10:01:38] 2026-01-08 08:49:45,874 | INFO     | --------------------------------------------------
[2026-01-08 10:01:38] 2026-01-08 08:49:45,874 | INFO     | 
[2026-01-08 10:01:38] 2026-01-08 08:49:45,874 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-01-08 10:01:38] 2026-01-08 08:49:45,881 | INFO     | time since job start (19005s) is within the limit (174528.0s)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,897 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,897 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,897 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,898 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,900 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,900 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 10:01:38] 2026-01-08 08:49:45,900 | INFO     | job 6962016410 has completed (purged errors)
[2026-01-08 10:01:38] 2026-01-08 08:49:45,900 | INFO     | overall cleanup function is called
[2026-01-08 10:01:38] 2026-01-08 08:49:46,909 | INFO     | --- collectZombieJob: --- 10, [3103299]
[2026-01-08 10:01:38] 2026-01-08 08:49:46,909 | INFO     | zombie collector waiting for pid 3103299
[2026-01-08 10:01:38] 2026-01-08 08:49:46,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 10:01:38] 2026-01-08 08:49:46,909 | INFO     | collected zombie processes
[2026-01-08 10:01:38] 2026-01-08 08:49:46,910 | INFO     | will attempt to kill all subprocesses of pid=3103299
[2026-01-08 10:01:38] 2026-01-08 08:49:47,245 | INFO     | process IDs to be killed: [3103299] (in reverse order)
[2026-01-08 10:01:38] 2026-01-08 08:49:47,330 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 10:01:38] 2026-01-08 08:49:47,330 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 10:01:38] 2026-01-08 08:49:47,340 | INFO     | did not find any defunct processes belonging to 3103299
[2026-01-08 10:01:38] 2026-01-08 08:49:47,350 | INFO     | did not find any defunct processes belonging to 3103299
[2026-01-08 10:01:38] 2026-01-08 08:49:47,351 | INFO     | ready for new job
[2026-01-08 10:01:38] 2026-01-08 08:49:47,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 10:01:38] 2026-01-08 08:49:47,354 | INFO     | ***************************************
[2026-01-08 10:01:38] 2026-01-08 08:49:47,354 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 10:01:38] 2026-01-08 08:49:47,354 | INFO     | ***************************************
[2026-01-08 10:01:38] 2026-01-08 08:49:47,354 | INFO     | 
[2026-01-08 10:01:38] 2026-01-08 08:49:47,357 | INFO     | architecture information:
[2026-01-08 10:01:38] 2026-01-08 08:49:47,358 | INFO     | executing command: cat /etc/os-release
[2026-01-08 10:01:38] 2026-01-08 08:49:47,374 | INFO     | cat /etc/os-release:
[2026-01-08 10:01:38] NAME="CentOS Linux"
[2026-01-08 10:01:38] VERSION="7 (Core)"
[2026-01-08 10:01:38] ID="centos"
[2026-01-08 10:01:38] ID_LIKE="rhel fedora"
[2026-01-08 10:01:38] VERSION_ID="7"
[2026-01-08 10:01:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 10:01:38] ANSI_COLOR="0;31"
[2026-01-08 10:01:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 10:01:38] HOME_URL="https://www.centos.org/"
[2026-01-08 10:01:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 10:01:38] 
[2026-01-08 10:01:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 10:01:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 10:01:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 10:01:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 10:01:38] 
[2026-01-08 10:01:38] 2026-01-08 08:49:47,374 | INFO     | ***************************************
[2026-01-08 10:01:38] 2026-01-08 08:49:47,877 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-08 10:01:38] 2026-01-08 08:49:47,895 | INFO     | sufficient remaining disk space (1668702797824 B)
[2026-01-08 10:01:38] 2026-01-08 08:49:47,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 10:01:38] 2026-01-08 08:49:47,895 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 10:01:38] 2026-01-08 08:49:47,896 | INFO     | update_server=False
[2026-01-08 10:01:38] 2026-01-08 08:49:47,896 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 10:01:38] 2026-01-08 08:49:47,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 10:01:38] 2026-01-08 08:49:48,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 10:01:38] 2026-01-08 08:49:48,478 | INFO     | all payload control threads have been joined
[2026-01-08 10:01:38] 2026-01-08 08:49:48,586 | INFO     | all data control threads have been joined
[2026-01-08 10:01:38] 2026-01-08 08:49:48,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 10:01:38] 2026-01-08 08:49:48,607 | INFO     | aborting loop
[2026-01-08 10:01:38] 2026-01-08 08:49:48,901 | INFO     | [job] retrieve thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:49,283 | INFO     | [payload] validate_post thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:49,296 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:49,480 | INFO     | [payload] control thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:49,491 | INFO     | all job control threads have been joined
[2026-01-08 10:01:38] 2026-01-08 08:49:49,591 | INFO     | [data] control thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:49,612 | INFO     | [job] job monitor thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:49,689 | INFO     | [job] validate thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:49,777 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:50,044 | INFO     | [payload] failed_post thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:50,118 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:50,218 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:50,342 | INFO     | [data] copytool_out thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:50,356 | INFO     | [data] copytool_in thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:50,450 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 10:01:38] 2026-01-08 08:49:50,495 | INFO     | [job] control thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:51,456 | INFO     | [job] queue monitor thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:49:51,902 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 10:01:38] 2026-01-08 08:50:19,402 | INFO     | PID=3096013 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 10:01:38] 2026-01-08 08:50:19,404 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 10:01:38] 2026-01-08 08:50:19,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 10:01:38] 2026-01-08 08:50:19,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 10:01:38] 2026-01-08 08:50:28,485 | INFO     | [monitor] cgroup control has ended
[2026-01-08 10:01:38] 2026-01-08 08:50:29,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23137801549632)>', '<ExcThread(monitor, started 23137557108480)>']
[2026-01-08 10:01:38] 2026-01-08 08:50:29,454 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 10:01:38] 2026-01-08 08:50:29,454 | INFO     | [monitor] control thread has ended
[2026-01-08 10:01:38] 2026-01-08 08:50:34,074 | INFO     | all workflow threads have been joined
[2026-01-08 10:01:38] 2026-01-08 08:50:34,074 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 10:01:38] 2026-01-08 08:50:34,074 | INFO     | traces error code: 0
[2026-01-08 10:01:38] 2026-01-08 08:50:34,075 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 10:01:38] 2026-01-08 08:50:34,246 [wrapper] ==== pilot stdout END ====
[2026-01-08 10:01:38] 2026-01-08 08:50:34,249 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 10:01:38] 2026-01-08 08:50:34,251 [wrapper] pilotpid: 3096013
[2026-01-08 10:01:38] 2026-01-08 08:50:34,255 [wrapper] Pilot exit status: 0
[2026-01-08 10:01:38] 2026-01-08 08:50:34,265 [wrapper] pandaids: 6962016410
[2026-01-08 10:01:38] 2026-01-08 08:50:34,325 [wrapper] cleanup supervisor_pilot 3253710 3096014
[2026-01-08 10:01:38] 2026-01-08 08:50:34,327 [wrapper] Test setup, not cleaning
[2026-01-08 10:01:38] 2026-01-08 08:50:34,330 [wrapper] apfmon messages muted
[2026-01-08 10:01:38] 2026-01-08 08:50:34,332 [wrapper] ==== wrapper stdout END ====
[2026-01-08 10:01:38] 2026-01-08 08:50:34,335 [wrapper] ==== wrapper stderr END ====
[2026-01-08 10:01:38]  *** Error codes and diagnostics ***
[2026-01-08 10:01:38]     "exeErrorCode": 0,
[2026-01-08 10:01:38]     "exeErrorDiag": "",
[2026-01-08 10:01:38]     "pilotErrorCode": 0,
[2026-01-08 10:01:38]     "pilotErrorDiag": "",
[2026-01-08 10:01:38]  *** Listing of results directory ***
[2026-01-08 10:01:38] total 444164
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc    579449 Jan  7 16:25 pilot3.tar.gz
[2026-01-08 10:01:38] -rwx------ 1 boinc boinc     36322 Jan  7 16:32 runpilot2-wrapper.sh
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc      5112 Jan  7 16:33 queuedata.json
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc       100 Jan  8 04:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 10:01:38] -rwxr-xr-x 1 boinc boinc      7986 Jan  8 04:32 run_atlas
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc       105 Jan  8 04:32 job.xml
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc      6424 Jan  8 04:32 init_data.xml
[2026-01-08 10:01:38] -rw-r--r-- 2 boinc boinc 224047656 Jan  8 04:32 EVNT.47898824._000415.pool.root.1
[2026-01-08 10:01:38] -rw-r--r-- 2 boinc boinc     15847 Jan  8 04:32 start_atlas.sh
[2026-01-08 10:01:38] drwxrwx--x 2 boinc boinc      4096 Jan  8 04:32 shared
[2026-01-08 10:01:38] -rw-r--r-- 2 boinc boinc    592397 Jan  8 04:32 input.tar.gz
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc         0 Jan  8 04:32 boinc_lockfile
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc      2516 Jan  8 04:32 pandaJob.out
[2026-01-08 10:01:38] -rw------- 1 boinc boinc    989835 Jan  8 04:32 agis_schedconf.cvmfs.json
[2026-01-08 10:01:38] drwx------ 5 boinc boinc      4096 Jan  8 04:33 pilot3
[2026-01-08 10:01:38] -rw------- 1 boinc boinc 220677762 Jan  8 09:48 HITS.47898826._009203.pool.root.1
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc       528 Jan  8 09:49 boinc_task_state.xml
[2026-01-08 10:01:38] -rw------- 1 boinc boinc      1037 Jan  8 09:49 memory_monitor_summary.json
[2026-01-08 10:01:38] -rw------- 1 boinc boinc   1516240 Jan  8 09:49 agis_ddmendpoints.agis.ALL.json
[2026-01-08 10:01:38] -rw------- 1 boinc boinc    481431 Jan  8 09:49 log.47898826._009203.job.log.tgz.1
[2026-01-08 10:01:38] -rw------- 1 boinc boinc      7830 Jan  8 09:49 heartbeat.json
[2026-01-08 10:01:38] -rw------- 1 boinc boinc        95 Jan  8 09:50 pilot_heartbeat.json
[2026-01-08 10:01:38] -rw------- 1 boinc boinc      4759 Jan  8 09:50 pilotlog.txt
[2026-01-08 10:01:38] -rw------- 1 boinc boinc   2608917 Jan  8 09:50 log.47898826._009203.job.log.1
[2026-01-08 10:01:38] -rw------- 1 boinc boinc       357 Jan  8 09:50 output.list
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc       620 Jan  8 09:50 runtime_log
[2026-01-08 10:01:38] -rw------- 1 boinc boinc   3112960 Jan  8 09:50 result.tar.gz
[2026-01-08 10:01:38] -rw------- 1 boinc boinc       665 Jan  8 09:50 tdWMDmShkx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcIiKDm3x0oQm.diag
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc      9206 Jan  8 09:50 runtime_log.err
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc        26 Jan  8 10:01 wrapper_checkpoint.txt
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc      8192 Jan  8 10:01 boinc_mmap_file
[2026-01-08 10:01:38] -rw-r--r-- 1 boinc boinc     21169 Jan  8 10:01 stderr.txt
[2026-01-08 10:01:38] HITS file was successfully produced:
[2026-01-08 10:01:38] -rw------- 1 boinc boinc 220677762 Jan  8 09:48 shared/HITS.pool.root.1
[2026-01-08 10:01:38]  *** Contents of shared directory: ***
[2026-01-08 10:01:38] total 437952
[2026-01-08 10:01:38] -rw-r--r-- 2 boinc boinc 224047656 Jan  8 04:32 ATLAS.root_0
[2026-01-08 10:01:38] -rw-r--r-- 2 boinc boinc     15847 Jan  8 04:32 start_atlas.sh
[2026-01-08 10:01:38] -rw-r--r-- 2 boinc boinc    592397 Jan  8 04:32 input.tar.gz
[2026-01-08 10:01:38] -rw------- 1 boinc boinc 220677762 Jan  8 09:48 HITS.pool.root.1
[2026-01-08 10:01:38] -rw------- 1 boinc boinc   3112960 Jan  8 09:50 result.tar.gz
10:01:40 (3091808): run_atlas exited; CPU time 73396.661036
10:01:40 (3091808): called boinc_finish(0)

</stderr_txt>
]]>

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