Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:21:13 (861085): wrapper (7.7.26015): starting
11:21:13 (861085): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 11:21:13] Arguments: --nthreads 8
[2026-01-07 11:21:13] Threads: 8
[2026-01-07 11:21:13] Checking for CVMFS
[2026-01-07 11:21:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 11:21:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 11:21:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 11:21:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 11:21:15] 2.13.3.0 12755 90756 383708 154874 1 20 23798189 40960001 13100 16776704 0 124578840 99.595 147219373 11809 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-07 11:21:15] CVMFS is ok
[2026-01-07 11:21:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 11:21:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 11:21:15] Further information can be found at the LHC@home message board.
[2026-01-07 11:21:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 11:21:15] Checking for apptainer binary...
[2026-01-07 11:21:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 11:21:15] Running /usr/bin/apptainer --version
[2026-01-07 11:21:15] apptainer version 1.4.5-2.el9
[2026-01-07 11:21:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 11:21:15] c7-10-13.aglt2.org
[2026-01-07 11:21:15] apptainer works
[2026-01-07 11:21:15] Set ATHENA_PROC_NUMBER=8
[2026-01-07 11:21:15] Set ATHENA_CORE_NUMBER=8
[2026-01-07 11:21:15] Starting ATLAS job with PandaID=6962016252
[2026-01-07 11:21:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 08:15:25]  *** The last 200 lines of the pilot log: ***
[2026-01-08 08:15:25] 2026-01-08 13:14:39,657 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 08:15:25] 2026-01-08 13:14:39,657 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 08:15:25] 2026-01-08 13:14:39,916 | INFO     | fitting pss+swap vs Time
[2026-01-08 08:15:25] 2026-01-08 13:14:39,921 | INFO     | sum of square deviations: 578464989110.0974
[2026-01-08 08:15:25] 2026-01-08 13:14:40,067 | INFO     | monitor loop #4159: job 0:6962016252 is in state 'finished'
[2026-01-08 08:15:25] 2026-01-08 13:14:40,068 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 08:15:25] 2026-01-08 13:14:40,981 | INFO     | sum of deviations: 158456319238.74677
[2026-01-08 08:15:25] 2026-01-08 13:14:40,981 | INFO     | mean x: 1767840499.3501217
[2026-01-08 08:15:25] 2026-01-08 13:14:40,981 | INFO     | mean y: 2497668.6896831845
[2026-01-08 08:15:25] 2026-01-08 13:14:40,982 | INFO     | intersect: -481758948.048954
[2026-01-08 08:15:25] 2026-01-08 13:14:40,990 | INFO     | chi2: 4.308913776990935
[2026-01-08 08:15:25] 2026-01-08 13:14:40,998 | INFO     | sum of square deviations: 571445314825.6852
[2026-01-08 08:15:25] 2026-01-08 13:14:41,680 | INFO     | sum of deviations: 312607847401.811
[2026-01-08 08:15:25] 2026-01-08 13:14:41,681 | INFO     | mean x: 1767840346.850734
[2026-01-08 08:15:25] 2026-01-08 13:14:41,681 | INFO     | mean y: 2501009.3760195756
[2026-01-08 08:15:25] 2026-01-08 13:14:41,709 | INFO     | intersect: -964591993.2985363
[2026-01-08 08:15:25] 2026-01-08 13:14:41,743 | INFO     | chi2: 2.932879906305854
[2026-01-08 08:15:25] 2026-01-08 13:14:41,744 | INFO     | current chi2=2.932879906305854 (change=31.934588202551907 %)
[2026-01-08 08:15:25] 2026-01-08 13:14:41,779 | INFO     | sum of square deviations: 564480794060.3254
[2026-01-08 08:15:25] 2026-01-08 13:14:43,008 | INFO     | monitor loop #4160: job 0:6962016252 is in state 'finished'
[2026-01-08 08:15:25] 2026-01-08 13:14:43,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 08:15:25] 2026-01-08 13:14:43,698 | INFO     | sum of deviations: 309893775087.48535
[2026-01-08 08:15:25] 2026-01-08 13:14:43,699 | INFO     | mean x: 1767840194.3308764
[2026-01-08 08:15:25] 2026-01-08 13:14:43,699 | INFO     | mean y: 2500949.9393939395
[2026-01-08 08:15:25] 2026-01-08 13:14:43,699 | INFO     | intersect: -968023959.5653955
[2026-01-08 08:15:25] 2026-01-08 13:14:43,746 | INFO     | chi2: 2.9329607769962687
[2026-01-08 08:15:25] 2026-01-08 13:14:43,746 | INFO     | current chi2=2.9329607769962687 (change=-0.002757381583904528 %)
[2026-01-08 08:15:25] 2026-01-08 13:14:43,747 | INFO     | right removable region: 1220
[2026-01-08 08:15:25] 2026-01-08 13:14:43,826 | INFO     | sum of square deviations: 571444750573.4451
[2026-01-08 08:15:25] 2026-01-08 13:14:44,330 | INFO     | sum of deviations: -133016019568.76755
[2026-01-08 08:15:25] 2026-01-08 13:14:44,330 | INFO     | mean x: 1767840651.855628
[2026-01-08 08:15:25] 2026-01-08 13:14:44,330 | INFO     | mean y: 2503995.5097879283
[2026-01-08 08:15:25] 2026-01-08 13:14:44,330 | INFO     | intersect: 414006816.2211808
[2026-01-08 08:15:25] 2026-01-08 13:14:44,334 | INFO     | chi2: 2.1056944052814806
[2026-01-08 08:15:25] 2026-01-08 13:14:44,335 | INFO     | current chi2=2.1056944052814806 (change=51.13166532768357 %)
[2026-01-08 08:15:25] 2026-01-08 13:14:44,338 | INFO     | sum of square deviations: 564481536361.7207
[2026-01-08 08:15:25] 2026-01-08 13:14:44,968 | INFO     | sum of deviations: -223359048866.79358
[2026-01-08 08:15:25] 2026-01-08 13:14:44,969 | INFO     | mean x: 1767840804.3611794
[2026-01-08 08:15:25] 2026-01-08 13:14:44,969 | INFO     | mean y: 2505973.19000819
[2026-01-08 08:15:25] 2026-01-08 13:14:44,969 | INFO     | intersect: 702020864.598239
[2026-01-08 08:15:25] 2026-01-08 13:14:44,977 | INFO     | chi2: 1.9015731197001613
[2026-01-08 08:15:25] 2026-01-08 13:14:44,978 | INFO     | current chi2=1.9015731197001613 (change=9.693775367847508 %)
[2026-01-08 08:15:25] 2026-01-08 13:14:44,978 | INFO     | left removable region: 20
[2026-01-08 08:15:25] 2026-01-08 13:14:44,981 | INFO     | sum of square deviations: 535852484320.39874
[2026-01-08 08:15:25] 2026-01-08 13:14:45,643 | INFO     | monitor loop #4161: job 0:6962016252 is in state 'finished'
[2026-01-08 08:15:25] 2026-01-08 13:14:45,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-08 08:15:25] 2026-01-08 13:14:45,712 | INFO     | sum of deviations: -169450274962.8735
[2026-01-08 08:15:25] 2026-01-08 13:14:45,712 | INFO     | mean x: 1767840773.8483334
[2026-01-08 08:15:25] 2026-01-08 13:14:45,712 | INFO     | mean y: 2511580.3633333333
[2026-01-08 08:15:25] 2026-01-08 13:14:45,713 | INFO     | intersect: 561548095.0472226
[2026-01-08 08:15:25] 2026-01-08 13:14:45,733 | INFO     | chi2: 0.3741778637615249
[2026-01-08 08:15:25] 2026-01-08 13:14:45,733 | INFO     | current memory leak: -0.32 B/s (using 1200 data points, chi2=0.37)
[2026-01-08 08:15:25] 2026-01-08 13:14:45,799 | INFO     | could have reported an average CPU frequency of 3292 MHz (44 samples)
[2026-01-08 08:15:25] 2026-01-08 13:14:45,799 | INFO     | ..............................
[2026-01-08 08:15:25] 2026-01-08 13:14:45,800 | INFO     | . Timing measurements:
[2026-01-08 08:15:25] 2026-01-08 13:14:45,800 | INFO     | . get job = 0 s
[2026-01-08 08:15:25] 2026-01-08 13:14:45,800 | INFO     | . initial setup = 3 s
[2026-01-08 08:15:25] 2026-01-08 13:14:45,800 | INFO     | . payload setup = 20 s
[2026-01-08 08:15:25] 2026-01-08 13:14:45,800 | INFO     | . stage-in = 0 s
[2026-01-08 08:15:25] 2026-01-08 13:14:45,800 | INFO     | . payload execution = 75061 s
[2026-01-08 08:15:25] 2026-01-08 13:14:45,800 | INFO     | . stage-out = 10 s
[2026-01-08 08:15:25] 2026-01-08 13:14:45,801 | INFO     | . log creation = 1 s
[2026-01-08 08:15:25] 2026-01-08 13:14:45,801 | INFO     | ..............................
[2026-01-08 08:15:25] 2026-01-08 13:14:47,089 | INFO     | PID=864805 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 08:15:25] 2026-01-08 13:14:47,089 | INFO     | .. there are 12 such processes running
[2026-01-08 08:15:25] 2026-01-08 13:14:47,090 | INFO     | 
[2026-01-08 08:15:25] 2026-01-08 13:14:47,090 | INFO     | job summary report
[2026-01-08 08:15:25] 2026-01-08 13:14:47,090 | INFO     | --------------------------------------------------
[2026-01-08 08:15:25] 2026-01-08 13:14:47,090 | INFO     | PanDA job id: 6962016252
[2026-01-08 08:15:25] 2026-01-08 13:14:47,090 | INFO     | task id: 47898826
[2026-01-08 08:15:25] 2026-01-08 13:14:47,091 | INFO     | errors: (none)
[2026-01-08 08:15:25] 2026-01-08 13:14:47,091 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 08:15:25] 2026-01-08 13:14:47,095 | INFO     | pilot state: finished 
[2026-01-08 08:15:25] 2026-01-08 13:14:47,095 | INFO     | transexitcode: 0
[2026-01-08 08:15:25] 2026-01-08 13:14:47,095 | INFO     | exeerrorcode: 0
[2026-01-08 08:15:25] 2026-01-08 13:14:47,095 | INFO     | exeerrordiag: 
[2026-01-08 08:15:25] 2026-01-08 13:14:47,096 | INFO     | exitcode: 0
[2026-01-08 08:15:25] 2026-01-08 13:14:47,096 | INFO     | exitmsg: OK
[2026-01-08 08:15:25] 2026-01-08 13:14:47,096 | INFO     | cpuconsumptiontime: 144843 s
[2026-01-08 08:15:25] 2026-01-08 13:14:47,096 | INFO     | nevents: 400
[2026-01-08 08:15:25] 2026-01-08 13:14:47,096 | INFO     | neventsw: 0
[2026-01-08 08:15:25] 2026-01-08 13:14:47,096 | INFO     | pid: 871310
[2026-01-08 08:15:25] 2026-01-08 13:14:47,096 | INFO     | pgrp: 871310
[2026-01-08 08:15:25] 2026-01-08 13:14:47,097 | INFO     | corecount: 8
[2026-01-08 08:15:25] 2026-01-08 13:14:47,097 | INFO     | event service: False
[2026-01-08 08:15:25] 2026-01-08 13:14:47,097 | INFO     | sizes: {0: 2283136, 1: 2283821, 2: 2284020, 13: 2284020, 15: 2284338, 24: 2284366, 75088: 2342637, 75089: 2342636, 75100: 2351690, 75102: 2351746, 75140: 2351940}
[2026-01-08 08:15:25] 2026-01-08 13:14:47,097 | INFO     | --------------------------------------------------
[2026-01-08 08:15:25] 2026-01-08 13:14:47,097 | INFO     | 
[2026-01-08 08:15:25] 2026-01-08 13:14:47,097 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-08 08:15:25] 2026-01-08 13:14:47,153 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,153 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,154 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,154 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,156 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 08:15:25] 2026-01-08 13:14:47,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,156 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 08:15:25] 2026-01-08 13:14:47,157 | INFO     | job 6962016252 has completed (purged errors)
[2026-01-08 08:15:25] 2026-01-08 13:14:47,157 | INFO     | overall cleanup function is called
[2026-01-08 08:15:25] 2026-01-08 13:14:48,177 | INFO     | --- collectZombieJob: --- 10, [871310]
[2026-01-08 08:15:25] 2026-01-08 13:14:48,177 | INFO     | zombie collector waiting for pid 871310
[2026-01-08 08:15:25] 2026-01-08 13:14:48,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 08:15:25] 2026-01-08 13:14:48,205 | INFO     | collected zombie processes
[2026-01-08 08:15:25] 2026-01-08 13:14:48,205 | INFO     | will attempt to kill all subprocesses of pid=871310
[2026-01-08 08:15:25] 2026-01-08 13:14:52,734 | INFO     | process IDs to be killed: [871310] (in reverse order)
[2026-01-08 08:15:25] 2026-01-08 13:14:53,147 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 08:15:25] 2026-01-08 13:14:53,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 08:15:25] 2026-01-08 13:14:53,360 | INFO     | did not find any defunct processes belonging to 871310
[2026-01-08 08:15:25] 2026-01-08 13:14:53,490 | INFO     | did not find any defunct processes belonging to 871310
[2026-01-08 08:15:25] 2026-01-08 13:14:53,491 | INFO     | ready for new job
[2026-01-08 08:15:25] 2026-01-08 13:14:53,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 08:15:25] 2026-01-08 13:14:53,546 | INFO     | ***************************************
[2026-01-08 08:15:25] 2026-01-08 13:14:53,547 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 08:15:25] 2026-01-08 13:14:53,547 | INFO     | ***************************************
[2026-01-08 08:15:25] 2026-01-08 13:14:53,547 | INFO     | 
[2026-01-08 08:15:25] 2026-01-08 13:14:53,601 | INFO     | architecture information:
[2026-01-08 08:15:25] 2026-01-08 13:14:53,614 | INFO     | executing command: cat /etc/os-release
[2026-01-08 08:15:25] 2026-01-08 13:14:53,668 | INFO     | cat /etc/os-release:
[2026-01-08 08:15:25] NAME="CentOS Linux"
[2026-01-08 08:15:25] VERSION="7 (Core)"
[2026-01-08 08:15:25] ID="centos"
[2026-01-08 08:15:25] ID_LIKE="rhel fedora"
[2026-01-08 08:15:25] VERSION_ID="7"
[2026-01-08 08:15:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 08:15:25] ANSI_COLOR="0;31"
[2026-01-08 08:15:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 08:15:25] HOME_URL="https://www.centos.org/"
[2026-01-08 08:15:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 08:15:25] 
[2026-01-08 08:15:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 08:15:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 08:15:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 08:15:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 08:15:25] 
[2026-01-08 08:15:25] 2026-01-08 13:14:53,669 | INFO     | ***************************************
[2026-01-08 08:15:25] 2026-01-08 13:14:54,174 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-08 08:15:25] 2026-01-08 13:14:54,270 | INFO     | sufficient remaining disk space (84749058048 B)
[2026-01-08 08:15:25] 2026-01-08 13:14:54,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 08:15:25] 2026-01-08 13:14:54,272 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 08:15:25] 2026-01-08 13:14:54,272 | INFO     | update_server=False
[2026-01-08 08:15:25] 2026-01-08 13:14:54,272 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 08:15:25] 2026-01-08 13:14:54,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 08:15:25] 2026-01-08 13:14:54,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:15:25] 2026-01-08 13:14:54,533 | INFO     | aborting loop
[2026-01-08 08:15:25] 2026-01-08 13:14:54,763 | INFO     | all data control threads have been joined
[2026-01-08 08:15:25] 2026-01-08 13:14:55,064 | INFO     | all job control threads have been joined
[2026-01-08 08:15:25] 2026-01-08 13:14:55,282 | INFO     | [job] retrieve thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:55,534 | INFO     | [data] copytool_in thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:55,536 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:55,536 | INFO     | [job] validate thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:55,540 | INFO     | [job] job monitor thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:55,769 | INFO     | [data] control thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:55,775 | INFO     | all payload control threads have been joined
[2026-01-08 08:15:25] 2026-01-08 13:14:56,070 | INFO     | [job] control thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:56,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 08:15:25] 2026-01-08 13:14:56,284 | INFO     | [data] copytool_out thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:56,387 | INFO     | [payload] failed_post thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:56,481 | INFO     | [payload] validate_post thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:56,560 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:56,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 08:15:25] 2026-01-08 13:14:56,787 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:56,788 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:56,804 | INFO     | [payload] control thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:14:57,120 | INFO     | [job] queue monitor thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:15:00,795 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 08:15:25] 2026-01-08 13:15:05,576 | INFO     | [monitor] cgroup control has ended
[2026-01-08 08:15:25] 2026-01-08 13:15:05,850 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140219725469504)>', '<ExcThread(monitor, started 140218938160896)>']
[2026-01-08 08:15:25] 2026-01-08 13:15:10,876 | INFO     | all workflow threads have been joined
[2026-01-08 08:15:25] 2026-01-08 13:15:10,876 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 08:15:25] 2026-01-08 13:15:10,877 | INFO     | traces error code: 0
[2026-01-08 08:15:25] 2026-01-08 13:15:10,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 08:15:25] 2026-01-08 13:15:22,715 | INFO     | PID=864805 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-08 08:15:25] 2026-01-08 13:15:22,716 | INFO     | .. there are 12 such processes running
[2026-01-08 08:15:25] 2026-01-08 13:15:22,717 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 08:15:25] 2026-01-08 13:15:22,718 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 08:15:25] 2026-01-08 13:15:22,718 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 08:15:25] 2026-01-08 13:15:22,718 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 08:15:25] 2026-01-08 13:15:22,718 | INFO     | [monitor] control thread has ended
[2026-01-08 08:15:25] 2026-01-08 13:15:23,697 [wrapper] ==== pilot stdout END ====
[2026-01-08 08:15:25] 2026-01-08 13:15:23,705 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 08:15:25] 2026-01-08 13:15:23,712 [wrapper] pilotpid: 864805
[2026-01-08 08:15:25] 2026-01-08 13:15:23,717 [wrapper] Pilot exit status: 0
[2026-01-08 08:15:25] 2026-01-08 13:15:23,828 [wrapper] pandaids: 6962016252
[2026-01-08 08:15:25] 2026-01-08 13:15:24,630 [wrapper] cleanup supervisor_pilot 2639794 864806
[2026-01-08 08:15:25] 2026-01-08 13:15:24,635 [wrapper] Test setup, not cleaning
[2026-01-08 08:15:25] 2026-01-08 13:15:24,645 [wrapper] apfmon messages muted
[2026-01-08 08:15:25] 2026-01-08 13:15:24,651 [wrapper] ==== wrapper stdout END ====
[2026-01-08 08:15:25] 2026-01-08 13:15:24,658 [wrapper] ==== wrapper stderr END ====
[2026-01-08 08:15:25]  *** Error codes and diagnostics ***
[2026-01-08 08:15:25]     "exeErrorCode": 0,
[2026-01-08 08:15:25]     "exeErrorDiag": "",
[2026-01-08 08:15:25]     "pilotErrorCode": 0,
[2026-01-08 08:15:25]     "pilotErrorDiag": "",
[2026-01-08 08:15:25]  *** Listing of results directory ***
[2026-01-08 08:15:25] total 463668
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 10:31 queuedata.json
[2026-01-08 08:15:25] -rwx------. 1 boincer umatlas     36322 Jan  7 10:31 runpilot2-wrapper.sh
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas       100 Jan  7 11:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 08:15:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 11:21 run_atlas
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas       105 Jan  7 11:21 job.xml
[2026-01-08 08:15:25] -rw-r--r--. 2 boincer umatlas 226175586 Jan  7 11:21 EVNT.47898824._000408.pool.root.1
[2026-01-08 08:15:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 11:21 start_atlas.sh
[2026-01-08 08:15:25] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 11:21 shared
[2026-01-08 08:15:25] -rw-r--r--. 2 boincer umatlas    592394 Jan  7 11:21 input.tar.gz
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas         0 Jan  7 11:21 boinc_lockfile
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas      2516 Jan  7 11:21 pandaJob.out
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas        57 Jan  7 11:21 setup.sh.local
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas    989793 Jan  7 11:21 agis_schedconf.cvmfs.json
[2026-01-08 08:15:25] drwx------. 5 boincer umatlas      4096 Jan  7 11:21 pilot3
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas      6901 Jan  8 08:09 init_data.xml
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas 224486956 Jan  8 08:11 HITS.47898826._009045.pool.root.1
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas       532 Jan  8 08:11 boinc_task_state.xml
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas      1039 Jan  8 08:13 memory_monitor_summary.json
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas   1516240 Jan  8 08:13 agis_ddmendpoints.agis.ALL.json
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas   1200989 Jan  8 08:14 log.47898826._009045.job.log.tgz.1
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas        95 Jan  8 08:14 pilot_heartbeat.json
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas      7798 Jan  8 08:14 heartbeat.json
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 08:15 boinc_mmap_file
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas        29 Jan  8 08:15 wrapper_checkpoint.txt
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas       822 Jan  8 08:15 pilotlog.txt
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas   8909805 Jan  8 08:15 log.47898826._009045.job.log.1
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas       357 Jan  8 08:15 output.list
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas       620 Jan  8 08:15 runtime_log
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas  10127360 Jan  8 08:15 result.tar.gz
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas      9343 Jan  8 08:15 runtime_log.err
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas       663 Jan  8 08:15 fdwMDmxgkx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPGiKDmwlOcWo.diag
[2026-01-08 08:15:25] -rw-r--r--. 1 boincer umatlas     21369 Jan  8 08:15 stderr.txt
[2026-01-08 08:15:25] HITS file was successfully produced:
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas 224486956 Jan  8 08:11 shared/HITS.pool.root.1
[2026-01-08 08:15:25]  *** Contents of shared directory: ***
[2026-01-08 08:15:25] total 450596
[2026-01-08 08:15:25] -rw-r--r--. 2 boincer umatlas 226175586 Jan  7 11:21 ATLAS.root_0
[2026-01-08 08:15:25] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 11:21 start_atlas.sh
[2026-01-08 08:15:25] -rw-r--r--. 2 boincer umatlas    592394 Jan  7 11:21 input.tar.gz
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas 224486956 Jan  8 08:11 HITS.pool.root.1
[2026-01-08 08:15:25] -rw-------. 1 boincer umatlas  10127360 Jan  8 08:15 result.tar.gz
08:15:27 (861085): run_atlas exited; CPU time 147285.027619
08:15:27 (861085): called boinc_finish(0)

</stderr_txt>
]]>

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