Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:07:34 (8830): wrapper (7.7.26015): starting
21:07:34 (8830): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 21:07:34] Arguments: --nthreads 8
[2026-01-07 21:07:34] Threads: 8
[2026-01-07 21:07:34] Checking for CVMFS
[2026-01-07 21:07:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 21:07:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 21:07:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 21:07:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 21:07:37] 2.11.2.0 24263 32995 103716 154878 3 100 13510134 25165824 1034 130560 0 16333736 99.816 10330542 3290 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-07 21:07:37] CVMFS is ok
[2026-01-07 21:07:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 21:07:37] Checking for apptainer binary...
[2026-01-07 21:07:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 21:07:37] Running /usr/bin/apptainer --version
[2026-01-07 21:07:37] apptainer version 1.3.2-1.el7
[2026-01-07 21:07:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 21:08:02] cg-vwn484.simple-grid.lan
[2026-01-07 21:08:02] apptainer works
[2026-01-07 21:08:02] Set ATHENA_PROC_NUMBER=8
[2026-01-07 21:08:02] Set ATHENA_CORE_NUMBER=8
[2026-01-07 21:08:02] Starting ATLAS job with PandaID=6962014825
[2026-01-07 21:08:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 02:03:57]  *** The last 200 lines of the pilot log: ***
[2026-01-08 02:03:57] 2026-01-08 01:03:16,984 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 02:03:57] 2026-01-08 01:03:16,985 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2026-01-08 02:03:57] 2026-01-08 01:03:16,987 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6962014825/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 02:03:57] 2026-01-08 01:03:16,988 | INFO     | extracted standard info from prmon json
[2026-01-08 02:03:57] 2026-01-08 01:03:16,988 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 02:03:57] 2026-01-08 01:03:16,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 02:03:57] 2026-01-08 01:03:16,989 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 02:03:57] 2026-01-08 01:03:16,989 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 02:03:57] 2026-01-08 01:03:16,995 | INFO     | fitting pss+swap vs Time
[2026-01-08 02:03:57] 2026-01-08 01:03:16,995 | INFO     | sum of square deviations: 6590404498.0
[2026-01-08 02:03:57] 2026-01-08 01:03:16,998 | INFO     | sum of deviations: 86654442247.00003
[2026-01-08 02:03:57] 2026-01-08 01:03:16,998 | INFO     | mean x: 1767825729.0
[2026-01-08 02:03:57] 2026-01-08 01:03:16,998 | INFO     | mean y: 2473902.205776173
[2026-01-08 02:03:57] 2026-01-08 01:03:16,998 | INFO     | intersect: -23241919151.798725
[2026-01-08 02:03:57] 2026-01-08 01:03:16,999 | INFO     | chi2: 6.577548392377918
[2026-01-08 02:03:57] 2026-01-08 01:03:16,999 | INFO     | sum of square deviations: 6239923508.0
[2026-01-08 02:03:57] 2026-01-08 01:03:17,002 | INFO     | sum of deviations: 84825797575.49997
[2026-01-08 02:03:57] 2026-01-08 01:03:17,002 | INFO     | mean x: 1767825576.5
[2026-01-08 02:03:57] 2026-01-08 01:03:17,002 | INFO     | mean y: 2473108.3860294116
[2026-01-08 02:03:57] 2026-01-08 01:03:17,002 | INFO     | intersect: -24029426370.62607
[2026-01-08 02:03:57] 2026-01-08 01:03:17,003 | INFO     | chi2: 6.5853869593018555
[2026-01-08 02:03:57] 2026-01-08 01:03:17,003 | INFO     | current chi2=6.5853869593018555 (change=-0.11917155840344615 %)
[2026-01-08 02:03:57] 2026-01-08 01:03:17,003 | INFO     | right removable region: 271
[2026-01-08 02:03:57] 2026-01-08 01:03:17,003 | INFO     | sum of square deviations: 6239923508.0
[2026-01-08 02:03:57] 2026-01-08 01:03:17,006 | INFO     | sum of deviations: -10620640154.999998
[2026-01-08 02:03:57] 2026-01-08 01:03:17,006 | INFO     | mean x: 1767825881.5
[2026-01-08 02:03:57] 2026-01-08 01:03:17,006 | INFO     | mean y: 2516204.536764706
[2026-01-08 02:03:57] 2026-01-08 01:03:17,006 | INFO     | intersect: 3011438111.998578
[2026-01-08 02:03:57] 2026-01-08 01:03:17,007 | INFO     | chi2: 1.7175284215630064
[2026-01-08 02:03:57] 2026-01-08 01:03:17,007 | INFO     | current chi2=1.7175284215630064 (change=73.88801542603194 %)
[2026-01-08 02:03:57] 2026-01-08 01:03:17,007 | INFO     | sum of square deviations: 5902093918.0
[2026-01-08 02:03:57] 2026-01-08 01:03:17,010 | INFO     | sum of deviations: -59106028751.00001
[2026-01-08 02:03:57] 2026-01-08 01:03:17,010 | INFO     | mean x: 1767826034.0
[2026-01-08 02:03:57] 2026-01-08 01:03:17,010 | INFO     | mean y: 2537980.5168539328
[2026-01-08 02:03:57] 2026-01-08 01:03:17,010 | INFO     | intersect: 17706284793.779667
[2026-01-08 02:03:57] 2026-01-08 01:03:17,011 | INFO     | chi2: 0.25707821216559884
[2026-01-08 02:03:57] 2026-01-08 01:03:17,011 | INFO     | current chi2=0.25707821216559884 (change=85.03208395633713 %)
[2026-01-08 02:03:57] 2026-01-08 01:03:17,011 | INFO     | sum of square deviations: 5576683165.5
[2026-01-08 02:03:57] 2026-01-08 01:03:17,014 | INFO     | sum of deviations: -61019488036.0
[2026-01-08 02:03:57] 2026-01-08 01:03:17,014 | INFO     | mean x: 1767826186.5
[2026-01-08 02:03:57] 2026-01-08 01:03:17,014 | INFO     | mean y: 2538851.396946565
[2026-01-08 02:03:57] 2026-01-08 01:03:17,014 | INFO     | intersect: 19345909388.244106
[2026-01-08 02:03:57] 2026-01-08 01:03:17,015 | INFO     | chi2: 0.23077419549422198
[2026-01-08 02:03:57] 2026-01-08 01:03:17,015 | INFO     | current chi2=0.23077419549422198 (change=10.2319120900191 %)
[2026-01-08 02:03:57] 2026-01-08 01:03:17,015 | INFO     | left removable region: 30
[2026-01-08 02:03:57] 2026-01-08 01:03:17,015 | INFO     | sum of square deviations: 4340323240.0
[2026-01-08 02:03:57] 2026-01-08 01:03:17,017 | INFO     | sum of deviations: -36287443442.00001
[2026-01-08 02:03:57] 2026-01-08 01:03:17,017 | INFO     | mean x: 1767826461.0
[2026-01-08 02:03:57] 2026-01-08 01:03:17,018 | INFO     | mean y: 2526801.6804979253
[2026-01-08 02:03:57] 2026-01-08 01:03:17,018 | INFO     | intersect: 14782509575.223541
[2026-01-08 02:03:57] 2026-01-08 01:03:17,018 | INFO     | chi2: 0.18932308387310662
[2026-01-08 02:03:57] 2026-01-08 01:03:17,018 | INFO     | current memory leak: -8.36 B/s (using 241 data points, chi2=0.19)
[2026-01-08 02:03:57] 2026-01-08 01:03:17,019 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-01-08 02:03:57] 2026-01-08 01:03:17,019 | INFO     | ..............................
[2026-01-08 02:03:57] 2026-01-08 01:03:17,020 | INFO     | . Timing measurements:
[2026-01-08 02:03:57] 2026-01-08 01:03:17,020 | INFO     | . get job = 0 s
[2026-01-08 02:03:57] 2026-01-08 01:03:17,020 | INFO     | . initial setup = 5 s
[2026-01-08 02:03:57] 2026-01-08 01:03:17,020 | INFO     | . payload setup = 153 s
[2026-01-08 02:03:57] 2026-01-08 01:03:17,020 | INFO     | . stage-in = 0 s
[2026-01-08 02:03:57] 2026-01-08 01:03:17,020 | INFO     | . payload execution = 17057 s
[2026-01-08 02:03:57] 2026-01-08 01:03:17,020 | INFO     | . stage-out = 1 s
[2026-01-08 02:03:57] 2026-01-08 01:03:17,020 | INFO     | . log creation = 0 s
[2026-01-08 02:03:57] 2026-01-08 01:03:17,020 | INFO     | ..............................
[2026-01-08 02:03:57] 2026-01-08 01:03:17,153 | INFO     | 
[2026-01-08 02:03:57] 2026-01-08 01:03:17,154 | INFO     | job summary report
[2026-01-08 02:03:57] 2026-01-08 01:03:17,154 | INFO     | --------------------------------------------------
[2026-01-08 02:03:57] 2026-01-08 01:03:17,154 | INFO     | PanDA job id: 6962014825
[2026-01-08 02:03:57] 2026-01-08 01:03:17,154 | INFO     | task id: 47898826
[2026-01-08 02:03:57] 2026-01-08 01:03:17,154 | INFO     | errors: (none)
[2026-01-08 02:03:57] 2026-01-08 01:03:17,154 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 02:03:57] 2026-01-08 01:03:17,154 | INFO     | pilot state: finished 
[2026-01-08 02:03:57] 2026-01-08 01:03:17,154 | INFO     | transexitcode: 0
[2026-01-08 02:03:57] 2026-01-08 01:03:17,155 | INFO     | exeerrorcode: 0
[2026-01-08 02:03:57] 2026-01-08 01:03:17,155 | INFO     | exeerrordiag: 
[2026-01-08 02:03:57] 2026-01-08 01:03:17,155 | INFO     | exitcode: 0
[2026-01-08 02:03:57] 2026-01-08 01:03:17,155 | INFO     | exitmsg: OK
[2026-01-08 02:03:57] 2026-01-08 01:03:17,155 | INFO     | cpuconsumptiontime: 72124 s
[2026-01-08 02:03:57] 2026-01-08 01:03:17,155 | INFO     | nevents: 400
[2026-01-08 02:03:57] 2026-01-08 01:03:17,155 | INFO     | neventsw: 0
[2026-01-08 02:03:57] 2026-01-08 01:03:17,155 | INFO     | pid: 19058
[2026-01-08 02:03:57] 2026-01-08 01:03:17,155 | INFO     | pgrp: 19058
[2026-01-08 02:03:57] 2026-01-08 01:03:17,155 | INFO     | corecount: 8
[2026-01-08 02:03:57] 2026-01-08 01:03:17,156 | INFO     | event service: False
[2026-01-08 02:03:57] 2026-01-08 01:03:17,156 | INFO     | sizes: {0: 2283794, 1: 2283993, 12: 2283993, 23: 2284021, 33: 2284049, 44: 2284105, 55: 2284261, 65: 2284289, 76: 2284317, 87: 2284373, 98: 2284401, 108: 2284709, 
[2026-01-08 02:03:57] 2026-01-08 01:03:17,156 | INFO     | --------------------------------------------------
[2026-01-08 02:03:57] 2026-01-08 01:03:17,156 | INFO     | 
[2026-01-08 02:03:57] 2026-01-08 01:03:17,156 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-01-08 02:03:57] 2026-01-08 01:03:17,179 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,179 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,179 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,180 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,180 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,180 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,180 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,181 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 02:03:57] 2026-01-08 01:03:17,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,181 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 02:03:57] 2026-01-08 01:03:17,182 | INFO     | job 6962014825 has completed (purged errors)
[2026-01-08 02:03:57] 2026-01-08 01:03:17,182 | INFO     | overall cleanup function is called
[2026-01-08 02:03:57] 2026-01-08 01:03:18,188 | INFO     | --- collectZombieJob: --- 10, [19058]
[2026-01-08 02:03:57] 2026-01-08 01:03:18,188 | INFO     | zombie collector waiting for pid 19058
[2026-01-08 02:03:57] 2026-01-08 01:03:18,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 02:03:57] 2026-01-08 01:03:18,188 | INFO     | collected zombie processes
[2026-01-08 02:03:57] 2026-01-08 01:03:18,189 | INFO     | will attempt to kill all subprocesses of pid=19058
[2026-01-08 02:03:57] 2026-01-08 01:03:18,257 | INFO     | process IDs to be killed: [19058] (in reverse order)
[2026-01-08 02:03:57] 2026-01-08 01:03:18,301 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 02:03:57] 2026-01-08 01:03:18,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 02:03:57] 2026-01-08 01:03:18,303 | INFO     | did not find any defunct processes belonging to 19058
[2026-01-08 02:03:57] 2026-01-08 01:03:18,304 | INFO     | did not find any defunct processes belonging to 19058
[2026-01-08 02:03:57] 2026-01-08 01:03:18,304 | INFO     | ready for new job
[2026-01-08 02:03:57] 2026-01-08 01:03:18,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 02:03:57] 2026-01-08 01:03:18,306 | INFO     | ***************************************
[2026-01-08 02:03:57] 2026-01-08 01:03:18,307 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 02:03:57] 2026-01-08 01:03:18,307 | INFO     | ***************************************
[2026-01-08 02:03:57] 2026-01-08 01:03:18,307 | INFO     | 
[2026-01-08 02:03:57] 2026-01-08 01:03:18,307 | INFO     | pilot is running in a VM
[2026-01-08 02:03:57] 2026-01-08 01:03:18,308 | INFO     | architecture information:
[2026-01-08 02:03:57] 2026-01-08 01:03:18,308 | INFO     | executing command: cat /etc/os-release
[2026-01-08 02:03:57] 2026-01-08 01:03:18,329 | INFO     | cat /etc/os-release:
[2026-01-08 02:03:57] NAME="CentOS Linux"
[2026-01-08 02:03:57] VERSION="7 (Core)"
[2026-01-08 02:03:57] ID="centos"
[2026-01-08 02:03:57] ID_LIKE="rhel fedora"
[2026-01-08 02:03:57] VERSION_ID="7"
[2026-01-08 02:03:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 02:03:57] ANSI_COLOR="0;31"
[2026-01-08 02:03:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 02:03:57] HOME_URL="https://www.centos.org/"
[2026-01-08 02:03:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 02:03:57] 
[2026-01-08 02:03:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 02:03:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 02:03:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 02:03:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 02:03:57] 
[2026-01-08 02:03:57] 2026-01-08 01:03:18,330 | INFO     | ***************************************
[2026-01-08 02:03:57] 2026-01-08 01:03:18,833 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-01-08 02:03:57] 2026-01-08 01:03:18,851 | INFO     | sufficient remaining disk space (497767415808 B)
[2026-01-08 02:03:57] 2026-01-08 01:03:18,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 02:03:57] 2026-01-08 01:03:18,851 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 02:03:57] 2026-01-08 01:03:18,852 | INFO     | update_server=False
[2026-01-08 02:03:57] 2026-01-08 01:03:18,852 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 02:03:57] 2026-01-08 01:03:18,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 02:03:57] 2026-01-08 01:03:18,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 02:03:57] 2026-01-08 01:03:18,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 02:03:57] 2026-01-08 01:03:18,853 | INFO     | aborting loop
[2026-01-08 02:03:57] 2026-01-08 01:03:19,059 | INFO     | all data control threads have been joined
[2026-01-08 02:03:57] 2026-01-08 01:03:19,296 | INFO     | all job control threads have been joined
[2026-01-08 02:03:57] 2026-01-08 01:03:19,327 | INFO     | all payload control threads have been joined
[2026-01-08 02:03:57] 2026-01-08 01:03:19,857 | INFO     | [job] retrieve thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:19,859 | INFO     | [job] queue monitor thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:19,858 | INFO     | [job] job monitor thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:20,065 | INFO     | [data] control thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:20,273 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:20,285 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:20,301 | INFO     | [job] control thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:20,333 | INFO     | [payload] control thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:20,420 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:20,543 | INFO     | [data] copytool_in thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:20,749 | INFO     | [job] validate thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:20,858 | INFO     | [data] copytool_out thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:21,343 | INFO     | [payload] validate_post thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:21,432 | INFO     | [payload] failed_post thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:21,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 02:03:57] 2026-01-08 01:03:25,698 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:29,224 | INFO     | job.realtimelogging is not enabled
[2026-01-08 02:03:57] 2026-01-08 01:03:30,230 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 02:03:57] 2026-01-08 01:03:48,300 | INFO     | PID=12576 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-08 02:03:57] 2026-01-08 01:03:48,301 | INFO     | .. there are 2 such processes running
[2026-01-08 02:03:57] 2026-01-08 01:03:48,301 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 02:03:57] 2026-01-08 01:03:48,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 02:03:57] 2026-01-08 01:03:48,302 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 02:03:57] 2026-01-08 01:03:52,203 | INFO     | [monitor] cgroup control has ended
[2026-01-08 02:03:57] 2026-01-08 01:03:52,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139842276243264)>', '<ExcThread(monitor, started 139841702450944)>']
[2026-01-08 02:03:57] 2026-01-08 01:03:52,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 02:03:57] 2026-01-08 01:03:52,322 | INFO     | [monitor] control thread has ended
[2026-01-08 02:03:57] 2026-01-08 01:03:57,240 | INFO     | all workflow threads have been joined
[2026-01-08 02:03:57] 2026-01-08 01:03:57,240 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 02:03:57] 2026-01-08 01:03:57,240 | INFO     | traces error code: 0
[2026-01-08 02:03:57] 2026-01-08 01:03:57,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 02:03:57] 2026-01-08 01:03:57,377 [wrapper] ==== pilot stdout END ====
[2026-01-08 02:03:57] 2026-01-08 01:03:57,389 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 02:03:57] 2026-01-08 01:03:57,399 [wrapper] pilotpid: 12576
[2026-01-08 02:03:57] 2026-01-08 01:03:57,413 [wrapper] Pilot exit status: 0
[2026-01-08 02:03:57] 2026-01-08 01:03:57,457 [wrapper] pandaids: 6962014825
[2026-01-08 02:03:57] 2026-01-08 01:03:57,532 [wrapper] cleanup supervisor_pilot 22326 12577
[2026-01-08 02:03:57] 2026-01-08 01:03:57,542 [wrapper] Test setup, not cleaning
[2026-01-08 02:03:57] 2026-01-08 01:03:57,552 [wrapper] apfmon messages muted
[2026-01-08 02:03:57] 2026-01-08 01:03:57,557 [wrapper] ==== wrapper stdout END ====
[2026-01-08 02:03:57] 2026-01-08 01:03:57,562 [wrapper] ==== wrapper stderr END ====
[2026-01-08 02:03:57]  *** Error codes and diagnostics ***
[2026-01-08 02:03:57]     "exeErrorCode": 0,
[2026-01-08 02:03:57]     "exeErrorDiag": "",
[2026-01-08 02:03:57]     "pilotErrorCode": 0,
[2026-01-08 02:03:57]     "pilotErrorDiag": "",
[2026-01-08 02:03:57]  *** Listing of results directory ***
[2026-01-08 02:03:57] total 440024
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc    579449 Jan  7 16:25 pilot3.tar.gz
[2026-01-08 02:03:57] -rwx------. 1 boinc boinc     36322 Jan  7 16:31 runpilot2-wrapper.sh
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc      5112 Jan  7 16:31 queuedata.json
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc       100 Jan  7 21:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 02:03:57] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 21:07 run_atlas
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc       105 Jan  7 21:07 job.xml
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc      6392 Jan  7 21:07 init_data.xml
[2026-01-08 02:03:57] -rw-r--r--. 2 boinc boinc 224036341 Jan  7 21:07 EVNT.47898824._000364.pool.root.1
[2026-01-08 02:03:57] -rw-r--r--. 2 boinc boinc     15847 Jan  7 21:07 start_atlas.sh
[2026-01-08 02:03:57] drwxrwx--x. 2 boinc boinc        68 Jan  7 21:07 shared
[2026-01-08 02:03:57] -rw-r--r--. 2 boinc boinc    592391 Jan  7 21:07 input.tar.gz
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc         0 Jan  7 21:07 boinc_lockfile
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc      2516 Jan  7 21:08 pandaJob.out
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc    989785 Jan  7 21:12 agis_schedconf.cvmfs.json
[2026-01-08 02:03:57] drwx------. 5 boinc boinc      4096 Jan  7 21:12 pilot3
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc 216953896 Jan  8 02:02 HITS.47898826._008677.pool.root.1
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc       531 Jan  8 02:02 boinc_task_state.xml
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc      1021 Jan  8 02:03 memory_monitor_summary.json
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc   1516240 Jan  8 02:03 agis_ddmendpoints.agis.ALL.json
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc    508838 Jan  8 02:03 log.47898826._008677.job.log.tgz.1
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc      7785 Jan  8 02:03 heartbeat.json
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc        95 Jan  8 02:03 pilot_heartbeat.json
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc      8192 Jan  8 02:03 boinc_mmap_file
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc        28 Jan  8 02:03 wrapper_checkpoint.txt
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc      4957 Jan  8 02:03 pilotlog.txt
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc   2334762 Jan  8 02:03 log.47898826._008677.job.log.1
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc       357 Jan  8 02:03 output.list
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc       620 Jan  8 02:03 runtime_log
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc   2867200 Jan  8 02:03 result.tar.gz
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc      8833 Jan  8 02:03 runtime_log.err
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc       657 Jan  8 02:03 A2JODmegkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcAdKDmaexwWm.diag
[2026-01-08 02:03:57] -rw-r--r--. 1 boinc boinc     20763 Jan  8 02:03 stderr.txt
[2026-01-08 02:03:57] HITS file was successfully produced:
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc 216953896 Jan  8 02:02 shared/HITS.pool.root.1
[2026-01-08 02:03:57]  *** Contents of shared directory: ***
[2026-01-08 02:03:57] total 434056
[2026-01-08 02:03:57] -rw-r--r--. 2 boinc boinc 224036341 Jan  7 21:07 ATLAS.root_0
[2026-01-08 02:03:57] -rw-r--r--. 2 boinc boinc     15847 Jan  7 21:07 start_atlas.sh
[2026-01-08 02:03:57] -rw-r--r--. 2 boinc boinc    592391 Jan  7 21:07 input.tar.gz
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc 216953896 Jan  8 02:02 HITS.pool.root.1
[2026-01-08 02:03:57] -rw-------. 1 boinc boinc   2867200 Jan  8 02:03 result.tar.gz
02:03:58 (8830): run_atlas exited; CPU time 72280.579779
02:03:58 (8830): called boinc_finish(0)

</stderr_txt>
]]>

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