Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:20:12 (2872209): wrapper (7.7.26015): starting
13:20:12 (2872209): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 13:20:12] Arguments: --nthreads 8
[2026-01-07 13:20:12] Threads: 8
[2026-01-07 13:20:12] Checking for CVMFS
[2026-01-07 13:20:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 13:20:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 13:20:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 13:20:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 13:20:15] 2.13.3.0 6317 18981 171916 154876 0 292 32257426 39288833 5880 16776704 0 5428848 99.311 10933651 39453 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-07 13:20:15] CVMFS is ok
[2026-01-07 13:20:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 13:20:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 13:20:15] Further information can be found at the LHC@home message board.
[2026-01-07 13:20:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 13:20:15] Checking for apptainer binary...
[2026-01-07 13:20:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 13:20:15] Running /usr/bin/apptainer --version
[2026-01-07 13:20:16] apptainer version 1.4.5-2.el9
[2026-01-07 13:20:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 13:20:17] c-211-18.aglt2.org
[2026-01-07 13:20:17] apptainer works
[2026-01-07 13:20:18] Set ATHENA_PROC_NUMBER=8
[2026-01-07 13:20:18] Set ATHENA_CORE_NUMBER=8
[2026-01-07 13:20:18] Starting ATLAS job with PandaID=6962016237
[2026-01-07 13:20:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 09:56:35]  *** The last 200 lines of the pilot log: ***
[2026-01-08 09:56:35] 2026-01-08 13:30:57,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 09:56:35] 2026-01-08 13:30:57,964 | INFO     | fitting pss+swap vs Time
[2026-01-08 09:56:35] 2026-01-08 13:30:57,966 | INFO     | sum of square deviations: 441496307476.3855
[2026-01-08 09:56:35] 2026-01-08 13:30:57,998 | INFO     | sum of deviations: 879993521648.824
[2026-01-08 09:56:35] 2026-01-08 13:30:57,999 | INFO     | mean x: 1767844674.0924444
[2026-01-08 09:56:35] 2026-01-08 13:30:57,999 | INFO     | mean y: 2511653.944
[2026-01-08 09:56:35] 2026-01-08 13:30:57,999 | INFO     | intersect: -3521168689.783309
[2026-01-08 09:56:35] 2026-01-08 13:30:58,001 | INFO     | chi2: 5.5244594651483565
[2026-01-08 09:56:35] 2026-01-08 13:30:58,003 | INFO     | sum of square deviations: 435635727350.343
[2026-01-08 09:56:35] 2026-01-08 13:30:58,035 | INFO     | sum of deviations: 874181111310.5731
[2026-01-08 09:56:35] 2026-01-08 13:30:58,035 | INFO     | mean x: 1767844521.5928571
[2026-01-08 09:56:35] 2026-01-08 13:30:58,036 | INFO     | mean y: 2511502.6964285714
[2026-01-08 09:56:35] 2026-01-08 13:30:58,036 | INFO     | intersect: -3544985159.0443373
[2026-01-08 09:56:35] 2026-01-08 13:30:58,037 | INFO     | chi2: 5.5247958819845415
[2026-01-08 09:56:35] 2026-01-08 13:30:58,038 | INFO     | current chi2=5.5247958819845415 (change=-0.006089588281122122 %)
[2026-01-08 09:56:35] 2026-01-08 13:30:58,038 | INFO     | right removable region: 1119
[2026-01-08 09:56:35] 2026-01-08 13:30:58,040 | INFO     | sum of square deviations: 435635388797.5856
[2026-01-08 09:56:35] 2026-01-08 13:30:58,124 | INFO     | sum of deviations: 528685332655.96826
[2026-01-08 09:56:35] 2026-01-08 13:30:58,124 | INFO     | mean x: 1767844826.5964286
[2026-01-08 09:56:35] 2026-01-08 13:30:58,124 | INFO     | mean y: 2520791.5419642855
[2026-01-08 09:56:35] 2026-01-08 13:30:58,124 | INFO     | intersect: -2142928486.1509812
[2026-01-08 09:56:35] 2026-01-08 13:30:58,127 | INFO     | chi2: 2.037994812806768
[2026-01-08 09:56:35] 2026-01-08 13:30:58,128 | INFO     | current chi2=2.037994812806768 (change=63.1096069097135 %)
[2026-01-08 09:56:35] 2026-01-08 13:30:58,129 | INFO     | sum of square deviations: 429826633049.9493
[2026-01-08 09:56:35] 2026-01-08 13:30:58,206 | INFO     | sum of deviations: 292750225097.86487
[2026-01-08 09:56:35] 2026-01-08 13:30:58,206 | INFO     | mean x: 1767844979.0995517
[2026-01-08 09:56:35] 2026-01-08 13:30:58,206 | INFO     | mean y: 2526983.929147982
[2026-01-08 09:56:35] 2026-01-08 13:30:58,207 | INFO     | intersect: -1201532922.4968505
[2026-01-08 09:56:35] 2026-01-08 13:30:58,208 | INFO     | chi2: 0.5181503906325489
[2026-01-08 09:56:35] 2026-01-08 13:30:58,209 | INFO     | current chi2=0.5181503906325489 (change=74.57548039982782 %)
[2026-01-08 09:56:35] 2026-01-08 13:30:58,210 | INFO     | sum of square deviations: 424069942422.4003
[2026-01-08 09:56:35] 2026-01-08 13:30:58,357 | INFO     | sum of deviations: 197532772286.1999
[2026-01-08 09:56:35] 2026-01-08 13:30:58,357 | INFO     | mean x: 1767845131.6
[2026-01-08 09:56:35] 2026-01-08 13:30:58,357 | INFO     | mean y: 2529504.0927927927
[2026-01-08 09:56:35] 2026-01-08 13:30:58,357 | INFO     | intersect: -820936898.2248169
[2026-01-08 09:56:35] 2026-01-08 13:30:58,363 | INFO     | chi2: 0.24234494750124436
[2026-01-08 09:56:35] 2026-01-08 13:30:58,363 | INFO     | current chi2=0.24234494750124436 (change=53.228840143226776 %)
[2026-01-08 09:56:35] 2026-01-08 13:30:58,365 | INFO     | sum of square deviations: 418364947767.0496
[2026-01-08 09:56:35] 2026-01-08 13:30:58,464 | INFO     | sum of deviations: 158137845465.5788
[2026-01-08 09:56:35] 2026-01-08 13:30:58,481 | INFO     | mean x: 1767845284.0995476
[2026-01-08 09:56:35] 2026-01-08 13:30:58,481 | INFO     | mean y: 2530555.958371041
[2026-01-08 09:56:35] 2026-01-08 13:30:58,481 | INFO     | intersect: -665697616.2059244
[2026-01-08 09:56:35] 2026-01-08 13:30:58,483 | INFO     | chi2: 0.19528809355831203
[2026-01-08 09:56:35] 2026-01-08 13:30:58,483 | INFO     | current chi2=0.19528809355831203 (change=19.41730348749718 %)
[2026-01-08 09:56:35] 2026-01-08 13:30:58,483 | INFO     | left removable region: 40
[2026-01-08 09:56:35] 2026-01-08 13:30:58,489 | INFO     | sum of square deviations: 389522102423.1905
[2026-01-08 09:56:35] 2026-01-08 13:30:58,628 | INFO     | sum of deviations: 265160276998.28348
[2026-01-08 09:56:35] 2026-01-08 13:30:58,629 | INFO     | mean x: 1767845711.1000926
[2026-01-08 09:56:35] 2026-01-08 13:30:58,629 | INFO     | mean y: 2527418.1640407783
[2026-01-08 09:56:35] 2026-01-08 13:30:58,629 | INFO     | intersect: -1200902260.227477
[2026-01-08 09:56:35] 2026-01-08 13:30:58,635 | INFO     | chi2: 0.00931634156468555
[2026-01-08 09:56:35] 2026-01-08 13:30:58,635 | INFO     | current memory leak: 0.68 B/s (using 1079 data points, chi2=0.01)
[2026-01-08 09:56:35] 2026-01-08 13:30:58,636 | INFO     | could have reported an average CPU frequency of 2899 MHz (41 samples)
[2026-01-08 09:56:35] 2026-01-08 13:30:58,637 | INFO     | ..............................
[2026-01-08 09:56:35] 2026-01-08 13:30:58,637 | INFO     | . Timing measurements:
[2026-01-08 09:56:35] 2026-01-08 13:30:58,637 | INFO     | . get job = 2 s
[2026-01-08 09:56:35] 2026-01-08 13:30:58,637 | INFO     | . initial setup = 10 s
[2026-01-08 09:56:35] 2026-01-08 13:30:58,637 | INFO     | . payload setup = 76 s
[2026-01-08 09:56:35] 2026-01-08 13:30:58,637 | INFO     | . stage-in = 0 s
[2026-01-08 09:56:35] 2026-01-08 13:30:58,642 | INFO     | . payload execution = 68666 s
[2026-01-08 09:56:35] 2026-01-08 13:30:58,642 | INFO     | . stage-out = 4 s
[2026-01-08 09:56:35] 2026-01-08 13:30:58,642 | INFO     | . log creation = 1 s
[2026-01-08 09:56:35] 2026-01-08 13:30:58,642 | INFO     | ..............................
[2026-01-08 09:56:35] 2026-01-08 13:30:59,139 | INFO     | 
[2026-01-08 09:56:35] 2026-01-08 13:30:59,139 | INFO     | job summary report
[2026-01-08 09:56:35] 2026-01-08 13:30:59,139 | INFO     | --------------------------------------------------
[2026-01-08 09:56:35] 2026-01-08 13:30:59,139 | INFO     | PanDA job id: 6962016237
[2026-01-08 09:56:35] 2026-01-08 13:30:59,139 | INFO     | task id: 47898826
[2026-01-08 09:56:35] 2026-01-08 13:30:59,139 | INFO     | errors: (none)
[2026-01-08 09:56:35] 2026-01-08 13:30:59,140 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 09:56:35] 2026-01-08 13:30:59,140 | INFO     | pilot state: finished 
[2026-01-08 09:56:35] 2026-01-08 13:30:59,140 | INFO     | transexitcode: 0
[2026-01-08 09:56:35] 2026-01-08 13:30:59,140 | INFO     | exeerrorcode: 0
[2026-01-08 09:56:35] 2026-01-08 13:30:59,140 | INFO     | exeerrordiag: 
[2026-01-08 09:56:35] 2026-01-08 13:30:59,140 | INFO     | exitcode: 0
[2026-01-08 09:56:35] 2026-01-08 13:30:59,140 | INFO     | exitmsg: OK
[2026-01-08 09:56:35] 2026-01-08 13:30:59,141 | INFO     | cpuconsumptiontime: 111066 s
[2026-01-08 09:56:35] 2026-01-08 13:30:59,141 | INFO     | nevents: 400
[2026-01-08 09:56:35] 2026-01-08 13:30:59,141 | INFO     | neventsw: 0
[2026-01-08 09:56:35] 2026-01-08 13:30:59,141 | INFO     | pid: 2885100
[2026-01-08 09:56:35] 2026-01-08 13:30:59,141 | INFO     | pgrp: 2885100
[2026-01-08 09:56:35] 2026-01-08 13:30:59,141 | INFO     | corecount: 8
[2026-01-08 09:56:35] 2026-01-08 13:30:59,141 | INFO     | event service: False
[2026-01-08 09:56:35] 2026-01-08 13:30:59,142 | INFO     | sizes: {0: 2283136, 1: 2283821, 3: 2283821, 4: 2284020, 5: 2284104, 17: 2284104, 30: 2284260, 42: 2284288, 53: 2284344, 58: 2284634, 65: 2284662, 68747: 2339974, 6
[2026-01-08 09:56:35] 2026-01-08 13:30:59,142 | INFO     | --------------------------------------------------
[2026-01-08 09:56:35] 2026-01-08 13:30:59,142 | INFO     | 
[2026-01-08 09:56:35] 2026-01-08 13:30:59,142 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-08 09:56:35] 2026-01-08 13:30:59,246 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,251 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,251 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,251 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,251 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,254 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 09:56:35] 2026-01-08 13:30:59,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,254 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 09:56:35] 2026-01-08 13:30:59,254 | INFO     | job 6962016237 has completed (purged errors)
[2026-01-08 09:56:35] 2026-01-08 13:30:59,254 | INFO     | overall cleanup function is called
[2026-01-08 09:56:35] 2026-01-08 13:30:59,695 | INFO     | PID=2876816 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 09:56:35] 2026-01-08 13:30:59,695 | INFO     | .. there are 8 such processes running
[2026-01-08 09:56:35] 2026-01-08 13:31:00,269 | INFO     | --- collectZombieJob: --- 10, [2885100]
[2026-01-08 09:56:35] 2026-01-08 13:31:00,269 | INFO     | zombie collector waiting for pid 2885100
[2026-01-08 09:56:35] 2026-01-08 13:31:00,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 09:56:35] 2026-01-08 13:31:00,269 | INFO     | collected zombie processes
[2026-01-08 09:56:35] 2026-01-08 13:31:00,270 | INFO     | will attempt to kill all subprocesses of pid=2885100
[2026-01-08 09:56:35] 2026-01-08 13:31:01,115 | INFO     | process IDs to be killed: [2885100] (in reverse order)
[2026-01-08 09:56:35] 2026-01-08 13:31:01,926 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 09:56:35] 2026-01-08 13:31:01,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 09:56:35] 2026-01-08 13:31:02,040 | INFO     | did not find any defunct processes belonging to 2885100
[2026-01-08 09:56:35] 2026-01-08 13:31:02,052 | INFO     | did not find any defunct processes belonging to 2885100
[2026-01-08 09:56:35] 2026-01-08 13:31:02,053 | INFO     | ready for new job
[2026-01-08 09:56:35] 2026-01-08 13:31:02,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 09:56:35] 2026-01-08 13:31:02,062 | INFO     | ***************************************
[2026-01-08 09:56:35] 2026-01-08 13:31:02,062 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 09:56:35] 2026-01-08 13:31:02,062 | INFO     | ***************************************
[2026-01-08 09:56:35] 2026-01-08 13:31:02,062 | INFO     | 
[2026-01-08 09:56:35] 2026-01-08 13:31:02,069 | INFO     | architecture information:
[2026-01-08 09:56:35] 2026-01-08 13:31:02,069 | INFO     | executing command: cat /etc/os-release
[2026-01-08 09:56:35] 2026-01-08 13:31:02,114 | INFO     | cat /etc/os-release:
[2026-01-08 09:56:35] NAME="CentOS Linux"
[2026-01-08 09:56:35] VERSION="7 (Core)"
[2026-01-08 09:56:35] ID="centos"
[2026-01-08 09:56:35] ID_LIKE="rhel fedora"
[2026-01-08 09:56:35] VERSION_ID="7"
[2026-01-08 09:56:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 09:56:35] ANSI_COLOR="0;31"
[2026-01-08 09:56:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 09:56:35] HOME_URL="https://www.centos.org/"
[2026-01-08 09:56:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 09:56:35] 
[2026-01-08 09:56:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 09:56:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 09:56:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 09:56:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 09:56:35] 
[2026-01-08 09:56:35] 2026-01-08 13:31:02,115 | INFO     | ***************************************
[2026-01-08 09:56:35] 2026-01-08 13:31:02,647 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-08 09:56:35] 2026-01-08 13:31:02,724 | INFO     | sufficient remaining disk space (52696186880 B)
[2026-01-08 09:56:35] 2026-01-08 13:31:02,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 09:56:35] 2026-01-08 13:31:02,725 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 09:56:35] 2026-01-08 13:31:02,725 | INFO     | update_server=False
[2026-01-08 09:56:35] 2026-01-08 13:31:02,725 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 09:56:35] 2026-01-08 13:31:02,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 09:56:35] 2026-01-08 13:31:03,043 | INFO     | all payload control threads have been joined
[2026-01-08 09:56:35] 2026-01-08 13:31:03,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 09:56:35] 2026-01-08 13:31:03,346 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:56:35] 2026-01-08 13:31:03,346 | INFO     | aborting loop
[2026-01-08 09:56:35] 2026-01-08 13:31:03,535 | INFO     | all data control threads have been joined
[2026-01-08 09:56:35] 2026-01-08 13:31:03,731 | INFO     | [job] retrieve thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:04,049 | INFO     | [payload] control thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:04,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 09:56:35] 2026-01-08 13:31:04,303 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:04,310 | INFO     | all job control threads have been joined
[2026-01-08 09:56:35] 2026-01-08 13:31:04,352 | INFO     | [job] job monitor thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:04,411 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:04,433 | INFO     | [job] validate thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:04,433 | INFO     | [data] copytool_in thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:04,541 | INFO     | [data] control thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:04,735 | INFO     | [data] copytool_out thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:05,111 | INFO     | [payload] validate_post thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:05,163 | INFO     | [job] queue monitor thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:05,202 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:05,210 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:05,214 | INFO     | [payload] failed_post thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:05,328 | INFO     | [job] control thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:07,207 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 09:56:35] 2026-01-08 13:31:35,715 | INFO     | PID=2876816 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-08 09:56:35] 2026-01-08 13:31:35,715 | INFO     | .. there are 8 such processes running
[2026-01-08 09:56:35] 2026-01-08 13:31:35,716 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 09:56:35] 2026-01-08 13:31:35,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 09:56:35] 2026-01-08 13:31:35,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 09:56:35] 2026-01-08 13:31:36,523 | INFO     | [monitor] cgroup control has ended
[2026-01-08 09:56:35] 2026-01-08 13:31:36,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528580638528)>', '<ExcThread(monitor, started 140528008017664)>']
[2026-01-08 09:56:35] 2026-01-08 13:31:37,728 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 09:56:35] 2026-01-08 13:31:37,728 | INFO     | [monitor] control thread has ended
[2026-01-08 09:56:35] 2026-01-08 13:31:41,898 | INFO     | all workflow threads have been joined
[2026-01-08 09:56:35] 2026-01-08 13:31:41,904 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 09:56:35] 2026-01-08 13:31:41,904 | INFO     | traces error code: 0
[2026-01-08 09:56:35] 2026-01-08 13:31:41,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 09:56:35] 2026-01-08 13:31:42,449 [wrapper] ==== pilot stdout END ====
[2026-01-08 09:56:35] 2026-01-08 13:31:42,473 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 09:56:35] 2026-01-08 13:31:42,508 [wrapper] pilotpid: 2876816
[2026-01-08 09:56:35] 2026-01-08 13:31:42,529 [wrapper] Pilot exit status: 0
[2026-01-08 09:56:35] 2026-01-08 13:31:42,683 [wrapper] pandaids: 6962016237
[2026-01-08 09:56:35] 2026-01-08 13:31:43,021 [wrapper] cleanup supervisor_pilot  342653 2876817
[2026-01-08 09:56:35] 2026-01-08 13:31:43,104 [wrapper] Test setup, not cleaning
[2026-01-08 09:56:35] 2026-01-08 13:31:43,178 [wrapper] apfmon messages muted
[2026-01-08 09:56:35] 2026-01-08 13:31:43,394 [wrapper] ==== wrapper stdout END ====
[2026-01-08 09:56:35] 2026-01-08 13:31:43,418 [wrapper] ==== wrapper stderr END ====
[2026-01-08 09:56:35]  *** Error codes and diagnostics ***
[2026-01-08 09:56:35]     "exeErrorCode": 0,
[2026-01-08 09:56:35]     "exeErrorDiag": "",
[2026-01-08 09:56:35]     "pilotErrorCode": 0,
[2026-01-08 09:56:35]     "pilotErrorDiag": "",
[2026-01-08 09:56:35]  *** Listing of results directory ***
[2026-01-08 09:56:35] total 459324
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-08 09:56:35] -rwx------. 1 boincer umatlas     36322 Jan  7 10:28 runpilot2-wrapper.sh
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 10:29 queuedata.json
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas       100 Jan  7 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 09:56:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 13:20 run_atlas
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas       105 Jan  7 13:20 job.xml
[2026-01-08 09:56:35] -rw-r--r--. 2 boincer umatlas 224351730 Jan  7 13:20 EVNT.47898824._000378.pool.root.1
[2026-01-08 09:56:35] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 13:20 start_atlas.sh
[2026-01-08 09:56:35] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 13:20 shared
[2026-01-08 09:56:35] -rw-r--r--. 2 boincer umatlas    592394 Jan  7 13:20 input.tar.gz
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas         0 Jan  7 13:20 boinc_lockfile
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas      2516 Jan  7 13:20 pandaJob.out
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas        57 Jan  7 13:20 setup.sh.local
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas    989785 Jan  7 13:22 agis_schedconf.cvmfs.json
[2026-01-08 09:56:35] drwx------. 5 boincer umatlas      4096 Jan  7 13:22 pilot3
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas 223541298 Jan  8 08:29 HITS.47898826._009030.pool.root.1
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas       532 Jan  8 08:29 boinc_task_state.xml
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas      1040 Jan  8 08:30 memory_monitor_summary.json
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas   1516240 Jan  8 08:30 agis_ddmendpoints.agis.ALL.json
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas   1130845 Jan  8 08:30 log.47898826._009030.job.log.tgz.1
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas      7821 Jan  8 08:30 heartbeat.json
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas        95 Jan  8 08:30 pilot_heartbeat.json
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas      4823 Jan  8 08:31 pilotlog.txt
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas   8135560 Jan  8 08:31 log.47898826._009030.job.log.1
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas       357 Jan  8 08:31 output.list
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas       620 Jan  8 08:31 runtime_log
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas   9287680 Jan  8 08:31 result.tar.gz
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas      9343 Jan  8 08:31 runtime_log.err
[2026-01-08 09:56:35] -rw-------. 1 boincer umatlas       660 Jan  8 08:31 Pv0LDm3dkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm13cKDmRHg3dm.diag
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas      6526 Jan  8 09:56 init_data.xml
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas      8192 Jan  8 09:56 boinc_mmap_file
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas        29 Jan  8 09:56 wrapper_checkpoint.txt
[2026-01-08 09:56:35] -rw-r--r--. 1 boincer umatlas     21160 Jan  8 09:56 stderr.txt
[2026-01-08 09:56:36] HITS file was successfully produced:
[2026-01-08 09:56:36] -rw-------. 1 boincer umatlas 223541298 Jan  8 08:29 shared/HITS.pool.root.1
[2026-01-08 09:56:36]  *** Contents of shared directory: ***
[2026-01-08 09:56:36] total 447072
[2026-01-08 09:56:36] -rw-r--r--. 2 boincer umatlas 224351730 Jan  7 13:20 ATLAS.root_0
[2026-01-08 09:56:36] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 13:20 start_atlas.sh
[2026-01-08 09:56:36] -rw-r--r--. 2 boincer umatlas    592394 Jan  7 13:20 input.tar.gz
[2026-01-08 09:56:36] -rw-------. 1 boincer umatlas 223541298 Jan  8 08:29 HITS.pool.root.1
[2026-01-08 09:56:36] -rw-------. 1 boincer umatlas   9287680 Jan  8 08:31 result.tar.gz
09:56:37 (2872209): run_atlas exited; CPU time 113236.582002
09:56:37 (2872209): called boinc_finish(0)

</stderr_txt>
]]>

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