Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:29:33 (3180022): wrapper (7.7.26015): starting
10:29:33 (3180022): wrapper: running run_atlas (--nthreads 12)
[2026-01-07 10:29:33] Arguments: --nthreads 12
[2026-01-07 10:29:33] Threads: 12
[2026-01-07 10:29:33] Checking for CVMFS
[2026-01-07 10:29:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 10:29:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 10:29:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 10:29:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 10:29:35] 2.13.3.0 9828 90666 327024 154872 2 203 30170369 32935936 16514 16776704 0 390709102 99.700 307252522 33341 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-07 10:29:35] CVMFS is ok
[2026-01-07 10:29:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 10:29:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 10:29:35] Further information can be found at the LHC@home message board.
[2026-01-07 10:29:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 10:29:35] Checking for apptainer binary...
[2026-01-07 10:29:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 10:29:35] Running /usr/bin/apptainer --version
[2026-01-07 10:29:35] apptainer version 1.4.5-2.el9
[2026-01-07 10:29:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 10:29:35] c-4-39.aglt2.org
[2026-01-07 10:29:35] apptainer works
[2026-01-07 10:29:35] Set ATHENA_PROC_NUMBER=12
[2026-01-07 10:29:35] Set ATHENA_CORE_NUMBER=12
[2026-01-07 10:29:35] Starting ATLAS job with PandaID=6962012618
[2026-01-07 10:29:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-07 19:08:37]  *** The last 200 lines of the pilot log: ***
[2026-01-07 19:08:37] 2026-01-08 00:07:29,213 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1501
[2026-01-07 19:08:37] 2026-01-08 00:07:29,227 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962012618/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 19:08:37] 2026-01-08 00:07:29,228 | INFO     | extracted standard info from prmon json
[2026-01-07 19:08:37] 2026-01-08 00:07:29,228 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 19:08:37] 2026-01-08 00:07:29,228 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 19:08:37] 2026-01-08 00:07:29,229 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 19:08:37] 2026-01-08 00:07:29,229 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 19:08:37] 2026-01-08 00:07:29,338 | INFO     | fitting pss+swap vs Time
[2026-01-07 19:08:37] 2026-01-08 00:07:29,396 | INFO     | sum of square deviations: 40172210382.6007
[2026-01-07 19:08:37] 2026-01-08 00:07:29,464 | INFO     | sum of deviations: -96106845883.68384
[2026-01-07 19:08:37] 2026-01-08 00:07:29,464 | INFO     | mean x: 1767815347.4387352
[2026-01-07 19:08:37] 2026-01-08 00:07:29,465 | INFO     | mean y: 2696630.9940711465
[2026-01-07 19:08:37] 2026-01-08 00:07:29,465 | INFO     | intersect: 4231967451.02074
[2026-01-07 19:08:37] 2026-01-08 00:07:29,509 | INFO     | chi2: 3.8699818215599224
[2026-01-07 19:08:37] 2026-01-08 00:07:29,510 | INFO     | sum of square deviations: 38993136774.43511
[2026-01-07 19:08:37] 2026-01-08 00:07:29,570 | INFO     | sum of deviations: -26259885279.7206
[2026-01-07 19:08:37] 2026-01-08 00:07:29,625 | INFO     | mean x: 1767815194.9441118
[2026-01-07 19:08:37] 2026-01-08 00:07:29,626 | INFO     | mean y: 2705611.00998004
[2026-01-07 19:08:37] 2026-01-08 00:07:29,626 | INFO     | intersect: 1193238819.0337863
[2026-01-07 19:08:37] 2026-01-08 00:07:29,627 | INFO     | chi2: 2.465219744652232
[2026-01-07 19:08:37] 2026-01-08 00:07:29,627 | INFO     | current chi2=2.465219744652232 (change=36.298932183135044 %)
[2026-01-07 19:08:37] 2026-01-08 00:07:29,628 | INFO     | sum of square deviations: 37837335124.63717
[2026-01-07 19:08:37] 2026-01-08 00:07:29,734 | INFO     | sum of deviations: -26730941175.221798
[2026-01-07 19:08:37] 2026-01-08 00:07:29,735 | INFO     | mean x: 1767815042.4475806
[2026-01-07 19:08:37] 2026-01-08 00:07:29,735 | INFO     | mean y: 2705548.856854839
[2026-01-07 19:08:37] 2026-01-08 00:07:29,735 | INFO     | intersect: 1251613796.5618827
[2026-01-07 19:08:37] 2026-01-08 00:07:29,736 | INFO     | chi2: 2.464447481896421
[2026-01-07 19:08:37] 2026-01-08 00:07:29,736 | INFO     | current chi2=2.464447481896421 (change=0.031326325269241624 %)
[2026-01-07 19:08:37] 2026-01-08 00:07:29,736 | INFO     | right removable region: 495
[2026-01-07 19:08:37] 2026-01-08 00:07:29,737 | INFO     | sum of square deviations: 38992908510.65104
[2026-01-07 19:08:37] 2026-01-08 00:07:29,806 | INFO     | sum of deviations: -208228981821.99814
[2026-01-07 19:08:37] 2026-01-08 00:07:29,806 | INFO     | mean x: 1767815499.948104
[2026-01-07 19:08:37] 2026-01-08 00:07:29,806 | INFO     | mean y: 2711086.4231536924
[2026-01-07 19:08:37] 2026-01-08 00:07:29,806 | INFO     | intersect: 9443156430.550014
[2026-01-07 19:08:37] 2026-01-08 00:07:29,853 | INFO     | chi2: 1.8923042647246864
[2026-01-07 19:08:37] 2026-01-08 00:07:29,854 | INFO     | current chi2=1.8923042647246864 (change=51.10301929113632 %)
[2026-01-07 19:08:37] 2026-01-08 00:07:29,854 | INFO     | sum of square deviations: 37836909401.11082
[2026-01-07 19:08:37] 2026-01-08 00:07:29,913 | INFO     | monitor loop #1602: job 0:6962012618 is in state 'finished'
[2026-01-07 19:08:37] 2026-01-08 00:07:29,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-07 19:08:37] 2026-01-08 00:07:29,913 | INFO     | sum of deviations: -216789466672.47784
[2026-01-07 19:08:37] 2026-01-08 00:07:29,914 | INFO     | mean x: 1767815652.4576614
[2026-01-07 19:08:37] 2026-01-08 00:07:29,914 | INFO     | mean y: 2712205.191532258
[2026-01-07 19:08:37] 2026-01-08 00:07:29,914 | INFO     | intersect: 10131547211.475199
[2026-01-07 19:08:37] 2026-01-08 00:07:29,915 | INFO     | chi2: 1.8436328786925138
[2026-01-07 19:08:37] 2026-01-08 00:07:29,915 | INFO     | current chi2=1.8436328786925138 (change=2.5720697743739347 %)
[2026-01-07 19:08:37] 2026-01-08 00:07:29,915 | INFO     | left removable region: 20
[2026-01-07 19:08:37] 2026-01-08 00:07:29,916 | INFO     | sum of square deviations: 33231834740.071484
[2026-01-07 19:08:37] 2026-01-08 00:07:29,995 | INFO     | sum of deviations: -102200362559.3558
[2026-01-07 19:08:37] 2026-01-08 00:07:29,995 | INFO     | mean x: 1767815621.9557896
[2026-01-07 19:08:37] 2026-01-08 00:07:29,995 | INFO     | mean y: 2715373.602105263
[2026-01-07 19:08:37] 2026-01-08 00:07:29,995 | INFO     | intersect: 5439411809.869534
[2026-01-07 19:08:37] 2026-01-08 00:07:29,996 | INFO     | chi2: 0.3364009738574674
[2026-01-07 19:08:37] 2026-01-08 00:07:30,054 | INFO     | current memory leak: -3.08 B/s (using 475 data points, chi2=0.34)
[2026-01-07 19:08:37] 2026-01-08 00:07:30,055 | INFO     | could have reported an average CPU frequency of 2600 MHz (20 samples)
[2026-01-07 19:08:37] 2026-01-08 00:07:30,055 | INFO     | ..............................
[2026-01-07 19:08:37] 2026-01-08 00:07:30,055 | INFO     | . Timing measurements:
[2026-01-07 19:08:37] 2026-01-08 00:07:30,055 | INFO     | . get job = 0 s
[2026-01-07 19:08:37] 2026-01-08 00:07:30,055 | INFO     | . initial setup = 6 s
[2026-01-07 19:08:37] 2026-01-08 00:07:30,055 | INFO     | . payload setup = 31 s
[2026-01-07 19:08:37] 2026-01-08 00:07:30,055 | INFO     | . stage-in = 0 s
[2026-01-07 19:08:37] 2026-01-08 00:07:30,056 | INFO     | . payload execution = 30868 s
[2026-01-07 19:08:37] 2026-01-08 00:07:30,056 | INFO     | . stage-out = 11 s
[2026-01-07 19:08:37] 2026-01-08 00:07:30,056 | INFO     | . log creation = 1 s
[2026-01-07 19:08:37] 2026-01-08 00:07:30,056 | INFO     | ..............................
[2026-01-07 19:08:37] 2026-01-08 00:07:30,103 | INFO     | time since job start (31022s) is within the limit (174528.0s)
[2026-01-07 19:08:37] 2026-01-08 00:07:31,498 | INFO     | 
[2026-01-07 19:08:37] 2026-01-08 00:07:31,498 | INFO     | job summary report
[2026-01-07 19:08:37] 2026-01-08 00:07:31,498 | INFO     | --------------------------------------------------
[2026-01-07 19:08:37] 2026-01-08 00:07:31,498 | INFO     | PanDA job id: 6962012618
[2026-01-07 19:08:37] 2026-01-08 00:07:31,498 | INFO     | task id: 47898826
[2026-01-07 19:08:37] 2026-01-08 00:07:31,499 | INFO     | errors: (none)
[2026-01-07 19:08:37] 2026-01-08 00:07:31,499 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-07 19:08:37] 2026-01-08 00:07:31,499 | INFO     | pilot state: finished 
[2026-01-07 19:08:37] 2026-01-08 00:07:31,499 | INFO     | transexitcode: 0
[2026-01-07 19:08:37] 2026-01-08 00:07:31,499 | INFO     | exeerrorcode: 0
[2026-01-07 19:08:37] 2026-01-08 00:07:31,499 | INFO     | exeerrordiag: 
[2026-01-07 19:08:37] 2026-01-08 00:07:31,499 | INFO     | exitcode: 0
[2026-01-07 19:08:37] 2026-01-08 00:07:31,499 | INFO     | exitmsg: OK
[2026-01-07 19:08:37] 2026-01-08 00:07:31,499 | INFO     | cpuconsumptiontime: 69226 s
[2026-01-07 19:08:37] 2026-01-08 00:07:31,499 | INFO     | nevents: 400
[2026-01-07 19:08:37] 2026-01-08 00:07:31,500 | INFO     | neventsw: 0
[2026-01-07 19:08:37] 2026-01-08 00:07:31,500 | INFO     | pid: 3196944
[2026-01-07 19:08:37] 2026-01-08 00:07:31,500 | INFO     | pgrp: 3196944
[2026-01-07 19:08:37] 2026-01-08 00:07:31,500 | INFO     | corecount: 12
[2026-01-07 19:08:37] 2026-01-08 00:07:31,500 | INFO     | event service: False
[2026-01-07 19:08:37] 2026-01-08 00:07:31,500 | INFO     | sizes: {0: 2283687, 1: 2283771, 2: 2283970, 3: 2283970, 13: 2283998, 24: 2284054, 25: 2284472, 35: 2284500, 30904: 2322397, 30905: 2322396, 30918: 2331450, 30920: 
[2026-01-07 19:08:37] 2026-01-08 00:07:31,500 | INFO     | --------------------------------------------------
[2026-01-07 19:08:37] 2026-01-08 00:07:31,500 | INFO     | 
[2026-01-07 19:08:37] 2026-01-08 00:07:31,501 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-07 19:08:37] 2026-01-08 00:07:31,771 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,771 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,772 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,772 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,772 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,772 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,772 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,773 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,773 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,773 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,773 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,773 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-07 19:08:37] 2026-01-08 00:07:31,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,773 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-07 19:08:37] 2026-01-08 00:07:31,774 | INFO     | job 6962012618 has completed (purged errors)
[2026-01-07 19:08:37] 2026-01-08 00:07:31,774 | INFO     | overall cleanup function is called
[2026-01-07 19:08:37] 2026-01-08 00:07:32,782 | INFO     | --- collectZombieJob: --- 10, [3196944]
[2026-01-07 19:08:37] 2026-01-08 00:07:32,783 | INFO     | zombie collector waiting for pid 3196944
[2026-01-07 19:08:37] 2026-01-08 00:07:32,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-07 19:08:37] 2026-01-08 00:07:32,783 | INFO     | collected zombie processes
[2026-01-07 19:08:37] 2026-01-08 00:07:32,783 | INFO     | will attempt to kill all subprocesses of pid=3196944
[2026-01-07 19:08:37] 2026-01-08 00:07:36,135 | INFO     | process IDs to be killed: [3196944] (in reverse order)
[2026-01-07 19:08:37] 2026-01-08 00:07:36,872 | WARNING  | found no corresponding commands to process id(s)
[2026-01-07 19:08:37] 2026-01-08 00:07:36,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-07 19:08:37] 2026-01-08 00:07:36,944 | INFO     | did not find any defunct processes belonging to 3196944
[2026-01-07 19:08:37] 2026-01-08 00:07:37,058 | INFO     | did not find any defunct processes belonging to 3196944
[2026-01-07 19:08:37] 2026-01-08 00:07:37,058 | INFO     | ready for new job
[2026-01-07 19:08:37] 2026-01-08 00:07:37,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-07 19:08:37] 2026-01-08 00:07:37,111 | INFO     | ***************************************
[2026-01-07 19:08:37] 2026-01-08 00:07:37,112 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-07 19:08:37] 2026-01-08 00:07:37,112 | INFO     | ***************************************
[2026-01-07 19:08:37] 2026-01-08 00:07:37,112 | INFO     | 
[2026-01-07 19:08:37] 2026-01-08 00:07:37,114 | INFO     | architecture information:
[2026-01-07 19:08:37] 2026-01-08 00:07:37,147 | INFO     | executing command: cat /etc/os-release
[2026-01-07 19:08:37] 2026-01-08 00:07:37,313 | INFO     | cat /etc/os-release:
[2026-01-07 19:08:37] NAME="CentOS Linux"
[2026-01-07 19:08:37] VERSION="7 (Core)"
[2026-01-07 19:08:37] ID="centos"
[2026-01-07 19:08:37] ID_LIKE="rhel fedora"
[2026-01-07 19:08:37] VERSION_ID="7"
[2026-01-07 19:08:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-07 19:08:37] ANSI_COLOR="0;31"
[2026-01-07 19:08:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-07 19:08:37] HOME_URL="https://www.centos.org/"
[2026-01-07 19:08:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-07 19:08:37] 
[2026-01-07 19:08:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-07 19:08:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-07 19:08:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-07 19:08:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-07 19:08:37] 
[2026-01-07 19:08:37] 2026-01-08 00:07:37,313 | INFO     | ***************************************
[2026-01-07 19:08:37] 2026-01-08 00:07:37,817 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-07 19:08:37] 2026-01-08 00:07:38,036 | INFO     | sufficient remaining disk space (75602329600 B)
[2026-01-07 19:08:37] 2026-01-08 00:07:38,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-07 19:08:37] 2026-01-08 00:07:38,037 | INFO     | current server update state: UPDATING_FINAL
[2026-01-07 19:08:37] 2026-01-08 00:07:38,037 | INFO     | update_server=False
[2026-01-07 19:08:37] 2026-01-08 00:07:38,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-07 19:08:37] 2026-01-08 00:07:38,122 | INFO     | all payload control threads have been joined
[2026-01-07 19:08:37] 2026-01-08 00:07:38,201 | INFO     | all data control threads have been joined
[2026-01-07 19:08:37] 2026-01-08 00:07:38,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-07 19:08:37] 2026-01-08 00:07:38,566 | INFO     | aborting loop
[2026-01-07 19:08:37] 2026-01-08 00:07:38,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-07 19:08:37] 2026-01-08 00:07:38,766 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-07 19:08:37] 2026-01-08 00:07:39,043 | INFO     | [job] retrieve thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:39,129 | INFO     | [payload] control thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:39,207 | INFO     | [data] control thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:39,229 | INFO     | [job] create_data_payload thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:39,306 | INFO     | [payload] execute_payloads thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:39,320 | INFO     | [payload] validate_post thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:39,571 | INFO     | [job] job monitor thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:39,620 | INFO     | [payload] validate_pre thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:39,741 | INFO     | all job control threads have been joined
[2026-01-07 19:08:37] 2026-01-08 00:07:40,100 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:40,128 | INFO     | [data] copytool_in thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:40,240 | INFO     | [job] validate thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:40,469 | INFO     | [payload] failed_post thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:40,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-07 19:08:37] 2026-01-08 00:07:40,749 | INFO     | [job] control thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:40,773 | INFO     | [data] copytool_out thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:41,581 | INFO     | [job] queue monitor thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:07:42,724 | INFO     | [data] queue_monitor thread has finished
[2026-01-07 19:08:37] 2026-01-08 00:08:06,672 | INFO     | PID=3185549 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-07 19:08:37] 2026-01-08 00:08:06,672 | INFO     | .. there are 27 such processes running
[2026-01-07 19:08:37] 2026-01-08 00:08:06,673 | INFO     | found 0 job(s) in 20 queues
[2026-01-07 19:08:37] 2026-01-08 00:08:06,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-07 19:08:37] 2026-01-08 00:08:06,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-07 19:08:37] 2026-01-08 00:08:29,535 | INFO     | [monitor] cgroup control has ended
[2026-01-07 19:08:37] 2026-01-08 00:08:30,534 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139772610750272)>', '<ExcThread(monitor, started 139771967948544)>']
[2026-01-07 19:08:37] 2026-01-08 00:08:30,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-07 19:08:37] 2026-01-08 00:08:30,828 | INFO     | [monitor] control thread has ended
[2026-01-07 19:08:37] 2026-01-08 00:08:35,560 | INFO     | all workflow threads have been joined
[2026-01-07 19:08:37] 2026-01-08 00:08:35,561 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-07 19:08:37] 2026-01-08 00:08:35,626 | INFO     | traces error code: 0
[2026-01-07 19:08:37] 2026-01-08 00:08:35,626 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-07 19:08:37] 2026-01-08 00:08:36,419 [wrapper] ==== pilot stdout END ====
[2026-01-07 19:08:37] 2026-01-08 00:08:36,465 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-07 19:08:37] 2026-01-08 00:08:36,504 [wrapper] pilotpid: 3185549
[2026-01-07 19:08:37] 2026-01-08 00:08:36,558 [wrapper] Pilot exit status: 0
[2026-01-07 19:08:37] 2026-01-08 00:08:36,644 [wrapper] pandaids: 6962012618
[2026-01-07 19:08:37] 2026-01-08 00:08:36,762 [wrapper] cleanup supervisor_pilot 2068242 3185550
[2026-01-07 19:08:37] 2026-01-08 00:08:36,816 [wrapper] Test setup, not cleaning
[2026-01-07 19:08:37] 2026-01-08 00:08:36,860 [wrapper] apfmon messages muted
[2026-01-07 19:08:37] 2026-01-08 00:08:36,908 [wrapper] ==== wrapper stdout END ====
[2026-01-07 19:08:37] 2026-01-08 00:08:36,980 [wrapper] ==== wrapper stderr END ====
[2026-01-07 19:08:37]  *** Error codes and diagnostics ***
[2026-01-07 19:08:37]     "exeErrorCode": 0,
[2026-01-07 19:08:37]     "exeErrorDiag": "",
[2026-01-07 19:08:37]     "pilotErrorCode": 0,
[2026-01-07 19:08:37]     "pilotErrorDiag": "",
[2026-01-07 19:08:37]  *** Listing of results directory ***
[2026-01-07 19:08:37] total 448760
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 10:27 queuedata.json
[2026-01-07 19:08:37] -rwx------. 1 boincer umatlas     36322 Jan  7 10:28 runpilot2-wrapper.sh
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas       100 Jan  7 10:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-07 19:08:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  7 10:29 run_atlas
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas       105 Jan  7 10:29 job.xml
[2026-01-07 19:08:37] -rw-r--r--. 2 boincer umatlas 227586952 Jan  7 10:29 EVNT.47898824._000152.pool.root.1
[2026-01-07 19:08:37] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 10:29 start_atlas.sh
[2026-01-07 19:08:37] drwxrwx--x. 2 boincer umatlas      4096 Jan  7 10:29 shared
[2026-01-07 19:08:37] -rw-r--r--. 2 boincer umatlas    592398 Jan  7 10:29 input.tar.gz
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas         0 Jan  7 10:29 boinc_lockfile
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas      2516 Jan  7 10:29 pandaJob.out
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas        57 Jan  7 10:29 setup.sh.local
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas    989408 Jan  7 10:30 agis_schedconf.cvmfs.json
[2026-01-07 19:08:37] drwx------. 5 boincer umatlas      4096 Jan  7 10:30 pilot3
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas      6656 Jan  7 19:00 init_data.xml
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas 219630951 Jan  7 19:03 HITS.47898826._007844.pool.root.1
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas       531 Jan  7 19:04 boinc_task_state.xml
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas      1057 Jan  7 19:06 memory_monitor_summary.json
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas   1516240 Jan  7 19:06 agis_ddmendpoints.agis.ALL.json
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas    702234 Jan  7 19:06 log.47898826._007844.job.log.tgz.1
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas        95 Jan  7 19:07 pilot_heartbeat.json
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas      7846 Jan  7 19:07 heartbeat.json
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas      4824 Jan  7 19:08 pilotlog.txt
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas   3497020 Jan  7 19:08 log.47898826._007844.job.log.1
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas      8192 Jan  7 19:08 boinc_mmap_file
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas       357 Jan  7 19:08 output.list
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas        28 Jan  7 19:08 wrapper_checkpoint.txt
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas       620 Jan  7 19:08 runtime_log
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas   4218880 Jan  7 19:08 result.tar.gz
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas      9335 Jan  7 19:08 runtime_log.err
[2026-01-07 19:08:37] -rw-------. 1 boincer umatlas       661 Jan  7 19:08 hL2LDmYdkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk2cKDm42x0om.diag
[2026-01-07 19:08:37] -rw-r--r--. 1 boincer umatlas     21264 Jan  7 19:08 stderr.txt
[2026-01-07 19:08:37] HITS file was successfully produced:
[2026-01-07 19:08:38] -rw-------. 1 boincer umatlas 219630951 Jan  7 19:03 shared/HITS.pool.root.1
[2026-01-07 19:08:38]  *** Contents of shared directory: ***
[2026-01-07 19:08:38] total 441460
[2026-01-07 19:08:38] -rw-r--r--. 2 boincer umatlas 227586952 Jan  7 10:29 ATLAS.root_0
[2026-01-07 19:08:38] -rw-r--r--. 2 boincer umatlas     15847 Jan  7 10:29 start_atlas.sh
[2026-01-07 19:08:38] -rw-r--r--. 2 boincer umatlas    592398 Jan  7 10:29 input.tar.gz
[2026-01-07 19:08:38] -rw-------. 1 boincer umatlas 219630951 Jan  7 19:03 HITS.pool.root.1
[2026-01-07 19:08:38] -rw-------. 1 boincer umatlas   4218880 Jan  7 19:08 result.tar.gz
19:08:39 (3180022): run_atlas exited; CPU time 70251.080795
19:08:39 (3180022): called boinc_finish(0)

</stderr_txt>
]]>

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