Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:11:56 (24256): wrapper (7.7.26015): starting
08:11:56 (24256): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 08:11:56] Arguments: --nthreads 8
[2026-01-07 08:11:56] Threads: 8
[2026-01-07 08:11:56] Checking for CVMFS
[2026-01-07 08:11:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 08:11:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 08:11:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 08:11:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 08:11:57] 2.11.2.0 2830 133821 87728 154868 2 1 18890311 20275201 1 130560 0 36043495 99.903 6946059 32482 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-07 08:11:57] CVMFS is ok
[2026-01-07 08:11:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-07 08:11:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-07 08:11:57] Further information can be found at the LHC@home message board.
[2026-01-07 08:11:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 08:11:57] Checking for apptainer binary...
[2026-01-07 08:11:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 08:11:57] Running /usr/bin/apptainer --version
[2026-01-07 08:11:57] apptainer version 1.3.2-1.el7
[2026-01-07 08:11:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 08:11:59] c-204-20.aglt2.org
[2026-01-07 08:11:59] apptainer works
[2026-01-07 08:11:59] Set ATHENA_PROC_NUMBER=8
[2026-01-07 08:11:59] Set ATHENA_CORE_NUMBER=8
[2026-01-07 08:11:59] Starting ATLAS job with PandaID=6961934307
[2026-01-07 08:11:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-07 11:11:42]  *** The last 200 lines of the pilot log: ***
[2026-01-07 11:11:42] 2026-01-07 16:10:53,441 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-07 11:11:42] 2026-01-07 16:10:53,445 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2026-01-07 11:11:42] 2026-01-07 16:10:53,447 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6961934307/memory_monitor_summary.json (trf name=prmon)
[2026-01-07 11:11:42] 2026-01-07 16:10:53,448 | INFO     | extracted standard info from prmon json
[2026-01-07 11:11:42] 2026-01-07 16:10:53,448 | INFO     | extracted standard memory fields from prmon json
[2026-01-07 11:11:42] 2026-01-07 16:10:53,448 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-07 11:11:42] 2026-01-07 16:10:53,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-07 11:11:42] 2026-01-07 16:10:53,449 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-07 11:11:42] 2026-01-07 16:10:53,453 | INFO     | fitting pss+swap vs Time
[2026-01-07 11:11:42] 2026-01-07 16:10:53,453 | INFO     | sum of square deviations: 1661798600.0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,454 | INFO     | sum of deviations: 21504638965.0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,455 | INFO     | mean x: 1767796880.0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,455 | INFO     | mean y: 2495768.8457142855
[2026-01-07 11:11:42] 2026-01-07 16:10:53,455 | INFO     | intersect: -22873822497.310863
[2026-01-07 11:11:42] 2026-01-07 16:10:53,455 | INFO     | chi2: 1.6665965906941094
[2026-01-07 11:11:42] 2026-01-07 16:10:53,456 | INFO     | sum of square deviations: 1523386702.5
[2026-01-07 11:11:42] 2026-01-07 16:10:53,457 | INFO     | sum of deviations: 21096337660.999996
[2026-01-07 11:11:42] 2026-01-07 16:10:53,457 | INFO     | mean x: 1767796727.5
[2026-01-07 11:11:42] 2026-01-07 16:10:53,457 | INFO     | mean y: 2495318.870588235
[2026-01-07 11:11:42] 2026-01-07 16:10:53,457 | INFO     | intersect: -24478509155.008755
[2026-01-07 11:11:42] 2026-01-07 16:10:53,457 | INFO     | chi2: 1.6679435633866404
[2026-01-07 11:11:42] 2026-01-07 16:10:53,458 | INFO     | current chi2=1.6679435633866404 (change=-0.08082175974991303 %)
[2026-01-07 11:11:42] 2026-01-07 16:10:53,458 | INFO     | right removable region: 169
[2026-01-07 11:11:42] 2026-01-07 16:10:53,458 | INFO     | sum of square deviations: 1523386702.5
[2026-01-07 11:11:42] 2026-01-07 16:10:53,459 | INFO     | sum of deviations: -8827078078.0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,459 | INFO     | mean x: 1767797032.5
[2026-01-07 11:11:42] 2026-01-07 16:10:53,459 | INFO     | mean y: 2528835.5764705883
[2026-01-07 11:11:42] 2026-01-07 16:10:53,459 | INFO     | intersect: 10245812701.928984
[2026-01-07 11:11:42] 2026-01-07 16:10:53,460 | INFO     | chi2: 0.05886033717018312
[2026-01-07 11:11:42] 2026-01-07 16:10:53,460 | INFO     | current chi2=0.05886033717018312 (change=96.46823127451205 %)
[2026-01-07 11:11:42] 2026-01-07 16:10:53,460 | INFO     | sum of square deviations: 1392881930.0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,461 | INFO     | sum of deviations: -12443156614.0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,461 | INFO     | mean x: 1767797185.0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,461 | INFO     | mean y: 2532994.787878788
[2026-01-07 11:11:42] 2026-01-07 16:10:53,461 | INFO     | intersect: 15794953558.922363
[2026-01-07 11:11:42] 2026-01-07 16:10:53,462 | INFO     | chi2: 0.017938576410945633
[2026-01-07 11:11:42] 2026-01-07 16:10:53,462 | INFO     | current chi2=0.017938576410945633 (change=69.52349022554908 %)
[2026-01-07 11:11:42] 2026-01-07 16:10:53,462 | INFO     | sum of square deviations: 1270051720.0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,463 | INFO     | sum of deviations: -12223486952.000006
[2026-01-07 11:11:42] 2026-01-07 16:10:53,463 | INFO     | mean x: 1767797337.5
[2026-01-07 11:11:42] 2026-01-07 16:10:53,463 | INFO     | mean y: 2532719.225
[2026-01-07 11:11:42] 2026-01-07 16:10:53,463 | INFO     | intersect: 17016523053.974201
[2026-01-07 11:11:42] 2026-01-07 16:10:53,464 | INFO     | chi2: 0.016878502768070625
[2026-01-07 11:11:42] 2026-01-07 16:10:53,464 | INFO     | current chi2=0.016878502768070625 (change=5.909463597279549 %)
[2026-01-07 11:11:42] 2026-01-07 16:10:53,464 | INFO     | left removable region: 30
[2026-01-07 11:11:42] 2026-01-07 16:10:53,464 | INFO     | sum of square deviations: 832722590.0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,465 | INFO     | sum of deviations: -8510684254.0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,465 | INFO     | mean x: 1767797612.0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,465 | INFO     | mean y: 2528800.7194244605
[2026-01-07 11:11:42] 2026-01-07 16:10:53,465 | INFO     | intersect: 18069971045.44969
[2026-01-07 11:11:42] 2026-01-07 16:10:53,465 | INFO     | chi2: 0.01600063544852364
[2026-01-07 11:11:42] 2026-01-07 16:10:53,466 | INFO     | current memory leak: -10.22 B/s (using 139 data points, chi2=0.02)
[2026-01-07 11:11:42] 2026-01-07 16:10:53,466 | INFO     | could have reported an average CPU frequency of 2025 MHz (9 samples)
[2026-01-07 11:11:42] 2026-01-07 16:10:53,466 | INFO     | ..............................
[2026-01-07 11:11:42] 2026-01-07 16:10:53,466 | INFO     | . Timing measurements:
[2026-01-07 11:11:42] 2026-01-07 16:10:53,466 | INFO     | . get job = 0 s
[2026-01-07 11:11:42] 2026-01-07 16:10:53,467 | INFO     | . initial setup = 2 s
[2026-01-07 11:11:42] 2026-01-07 16:10:53,467 | INFO     | . payload setup = 9 s
[2026-01-07 11:11:42] 2026-01-07 16:10:53,467 | INFO     | . stage-in = 0 s
[2026-01-07 11:11:42] 2026-01-07 16:10:53,467 | INFO     | . payload execution = 10673 s
[2026-01-07 11:11:42] 2026-01-07 16:10:53,467 | INFO     | . stage-out = 0 s
[2026-01-07 11:11:42] 2026-01-07 16:10:53,467 | INFO     | . log creation = 0 s
[2026-01-07 11:11:42] 2026-01-07 16:10:53,467 | INFO     | ..............................
[2026-01-07 11:11:42] 2026-01-07 16:10:53,558 | INFO     | 
[2026-01-07 11:11:42] 2026-01-07 16:10:53,558 | INFO     | job summary report
[2026-01-07 11:11:42] 2026-01-07 16:10:53,559 | INFO     | --------------------------------------------------
[2026-01-07 11:11:42] 2026-01-07 16:10:53,559 | INFO     | PanDA job id: 6961934307
[2026-01-07 11:11:42] 2026-01-07 16:10:53,559 | INFO     | task id: 47898826
[2026-01-07 11:11:42] 2026-01-07 16:10:53,559 | INFO     | errors: (none)
[2026-01-07 11:11:42] 2026-01-07 16:10:53,559 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-07 11:11:42] 2026-01-07 16:10:53,559 | INFO     | pilot state: finished 
[2026-01-07 11:11:42] 2026-01-07 16:10:53,560 | INFO     | transexitcode: 0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,560 | INFO     | exeerrorcode: 0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,560 | INFO     | exeerrordiag: 
[2026-01-07 11:11:42] 2026-01-07 16:10:53,560 | INFO     | exitcode: 0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,560 | INFO     | exitmsg: OK
[2026-01-07 11:11:42] 2026-01-07 16:10:53,561 | INFO     | cpuconsumptiontime: 80229 s
[2026-01-07 11:11:42] 2026-01-07 16:10:53,561 | INFO     | nevents: 400
[2026-01-07 11:11:42] 2026-01-07 16:10:53,561 | INFO     | neventsw: 0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,561 | INFO     | pid: 2484
[2026-01-07 11:11:42] 2026-01-07 16:10:53,561 | INFO     | pgrp: 2484
[2026-01-07 11:11:42] 2026-01-07 16:10:53,561 | INFO     | corecount: 8
[2026-01-07 11:11:42] 2026-01-07 16:10:53,562 | INFO     | event service: False
[2026-01-07 11:11:42] 2026-01-07 16:10:53,562 | INFO     | sizes: {0: 2283913, 1: 2283913, 7: 2284203, 11: 2284231, 10687: 2313176, 10688: 2322174, 10689: 2322358, 10697: 2322616}
[2026-01-07 11:11:42] 2026-01-07 16:10:53,562 | INFO     | --------------------------------------------------
[2026-01-07 11:11:42] 2026-01-07 16:10:53,562 | INFO     | 
[2026-01-07 11:11:42] 2026-01-07 16:10:53,562 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-07 11:11:42] 2026-01-07 16:10:53,590 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,590 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,590 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,591 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,591 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,593 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-07 11:11:42] 2026-01-07 16:10:53,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,594 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-07 11:11:42] 2026-01-07 16:10:53,594 | INFO     | job 6961934307 has completed (purged errors)
[2026-01-07 11:11:42] 2026-01-07 16:10:53,594 | INFO     | overall cleanup function is called
[2026-01-07 11:11:42] 2026-01-07 16:10:54,603 | INFO     | --- collectZombieJob: --- 10, [2484]
[2026-01-07 11:11:42] 2026-01-07 16:10:54,603 | INFO     | zombie collector waiting for pid 2484
[2026-01-07 11:11:42] 2026-01-07 16:10:54,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-07 11:11:42] 2026-01-07 16:10:54,603 | INFO     | collected zombie processes
[2026-01-07 11:11:42] 2026-01-07 16:10:54,604 | INFO     | will attempt to kill all subprocesses of pid=2484
[2026-01-07 11:11:42] 2026-01-07 16:10:54,694 | INFO     | process IDs to be killed: [2484] (in reverse order)
[2026-01-07 11:11:42] 2026-01-07 16:10:54,751 | WARNING  | found no corresponding commands to process id(s)
[2026-01-07 11:11:42] 2026-01-07 16:10:54,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-07 11:11:42] 2026-01-07 16:10:54,756 | INFO     | did not find any defunct processes belonging to 2484
[2026-01-07 11:11:42] 2026-01-07 16:10:54,759 | INFO     | did not find any defunct processes belonging to 2484
[2026-01-07 11:11:42] 2026-01-07 16:10:54,760 | INFO     | ready for new job
[2026-01-07 11:11:42] 2026-01-07 16:10:54,760 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-07 11:11:42] 2026-01-07 16:10:54,761 | INFO     | ***************************************
[2026-01-07 11:11:42] 2026-01-07 16:10:54,761 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-07 11:11:42] 2026-01-07 16:10:54,762 | INFO     | ***************************************
[2026-01-07 11:11:42] 2026-01-07 16:10:54,762 | INFO     | 
[2026-01-07 11:11:42] 2026-01-07 16:10:54,762 | INFO     | architecture information:
[2026-01-07 11:11:42] 2026-01-07 16:10:54,763 | INFO     | executing command: cat /etc/os-release
[2026-01-07 11:11:42] 2026-01-07 16:10:54,781 | INFO     | cat /etc/os-release:
[2026-01-07 11:11:42] NAME="CentOS Linux"
[2026-01-07 11:11:42] VERSION="7 (Core)"
[2026-01-07 11:11:42] ID="centos"
[2026-01-07 11:11:42] ID_LIKE="rhel fedora"
[2026-01-07 11:11:42] VERSION_ID="7"
[2026-01-07 11:11:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-07 11:11:42] ANSI_COLOR="0;31"
[2026-01-07 11:11:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-07 11:11:42] HOME_URL="https://www.centos.org/"
[2026-01-07 11:11:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-07 11:11:42] 
[2026-01-07 11:11:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-07 11:11:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-07 11:11:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-07 11:11:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-07 11:11:42] 
[2026-01-07 11:11:42] 2026-01-07 16:10:54,781 | INFO     | ***************************************
[2026-01-07 11:11:42] 2026-01-07 16:10:55,284 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-07 11:11:42] 2026-01-07 16:10:55,305 | INFO     | sufficient remaining disk space (18656264192 B)
[2026-01-07 11:11:42] 2026-01-07 16:10:55,306 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-07 11:11:42] 2026-01-07 16:10:55,306 | INFO     | current server update state: UPDATING_FINAL
[2026-01-07 11:11:42] 2026-01-07 16:10:55,306 | INFO     | update_server=False
[2026-01-07 11:11:42] 2026-01-07 16:10:55,306 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-07 11:11:42] 2026-01-07 16:10:55,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-07 11:11:42] 2026-01-07 16:10:55,401 | INFO     | all data control threads have been joined
[2026-01-07 11:11:42] 2026-01-07 16:10:55,540 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-07 11:11:42] 2026-01-07 16:10:55,540 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-07 11:11:42] 2026-01-07 16:10:55,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-07 11:11:42] 2026-01-07 16:10:55,541 | INFO     | will abort loop
[2026-01-07 11:11:42] 2026-01-07 16:10:55,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-07 11:11:42] 2026-01-07 16:10:55,770 | INFO     | all payload control threads have been joined
[2026-01-07 11:11:42] 2026-01-07 16:10:56,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-07 11:11:42] 2026-01-07 16:10:56,307 | INFO     | [job] retrieve thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:56,313 | INFO     | [job] queue monitor thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:56,321 | INFO     | [job] validate thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:56,337 | INFO     | [payload] validate_post thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:56,405 | INFO     | [data] control thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:56,546 | INFO     | [job] job monitor thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:56,561 | INFO     | [payload] failed_post thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:56,582 | INFO     | all job control threads have been joined
[2026-01-07 11:11:42] 2026-01-07 16:10:56,602 | INFO     | [job] create_data_payload thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:56,774 | INFO     | [data] copytool_in thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:56,776 | INFO     | [payload] control thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:56,891 | INFO     | [payload] validate_pre thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:57,044 | INFO     | [payload] execute_payloads thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:57,588 | INFO     | [job] control thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:10:57,655 | INFO     | [data] copytool_out thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:11:00,035 | INFO     | [data] queue_monitor thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:11:05,610 | INFO     | job.realtimelogging is not enabled
[2026-01-07 11:11:42] 2026-01-07 16:11:06,616 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-07 11:11:42] 2026-01-07 16:11:25,621 | INFO     | PID=28427 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-07 11:11:42] 2026-01-07 16:11:25,621 | INFO     | found 0 job(s) in 20 queues
[2026-01-07 11:11:42] 2026-01-07 16:11:25,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-07 11:11:42] 2026-01-07 16:11:25,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-07 11:11:42] 2026-01-07 16:11:36,701 | INFO     | [monitor] cgroup control has ended
[2026-01-07 11:11:42] 2026-01-07 16:11:37,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508710287168)>', '<ExcThread(monitor, started 140507741140736)>']
[2026-01-07 11:11:42] 2026-01-07 16:11:37,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-07 11:11:42] 2026-01-07 16:11:37,683 | INFO     | [monitor] control thread has ended
[2026-01-07 11:11:42] 2026-01-07 16:11:42,414 | INFO     | all workflow threads have been joined
[2026-01-07 11:11:42] 2026-01-07 16:11:42,415 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-07 11:11:42] 2026-01-07 16:11:42,418 | INFO     | traces error code: 0
[2026-01-07 11:11:42] 2026-01-07 16:11:42,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-07 11:11:42] 2026-01-07 16:11:42,542 [wrapper] ==== pilot stdout END ====
[2026-01-07 11:11:42] 2026-01-07 16:11:42,547 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-07 11:11:42] 2026-01-07 16:11:42,551 [wrapper] pilotpid: 28427
[2026-01-07 11:11:42] 2026-01-07 16:11:42,555 [wrapper] Pilot exit status: 0
[2026-01-07 11:11:42] 2026-01-07 16:11:42,574 [wrapper] pandaids: 6961934307
[2026-01-07 11:11:42] 2026-01-07 16:11:42,625 [wrapper] cleanup supervisor_pilot 14395 28428
[2026-01-07 11:11:42] 2026-01-07 16:11:42,629 [wrapper] Test setup, not cleaning
[2026-01-07 11:11:42] 2026-01-07 16:11:42,633 [wrapper] apfmon messages muted
[2026-01-07 11:11:42] 2026-01-07 16:11:42,638 [wrapper] ==== wrapper stdout END ====
[2026-01-07 11:11:42] 2026-01-07 16:11:42,642 [wrapper] ==== wrapper stderr END ====
[2026-01-07 11:11:42]  *** Error codes and diagnostics ***
[2026-01-07 11:11:42]     "exeErrorCode": 0,
[2026-01-07 11:11:42]     "exeErrorDiag": "",
[2026-01-07 11:11:42]     "pilotErrorCode": 0,
[2026-01-07 11:11:42]     "pilotErrorDiag": "",
[2026-01-07 11:11:42]  *** Listing of results directory ***
[2026-01-07 11:11:42] total 439940
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 08:00 pilot3.tar.gz
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 08:05 queuedata.json
[2026-01-07 11:11:42] -rwx------ 1 boincer umatlas     36322 Jan  7 08:06 runpilot2-wrapper.sh
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas       100 Jan  7 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-07 11:11:42] -rwxr-xr-x 1 boincer umatlas      7986 Jan  7 08:11 run_atlas
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas       105 Jan  7 08:11 job.xml
[2026-01-07 11:11:42] -rw-r--r-- 2 boincer umatlas 223013063 Jan  7 08:11 EVNT.47898824._000143.pool.root.1
[2026-01-07 11:11:42] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 08:11 start_atlas.sh
[2026-01-07 11:11:42] drwxrwx--x 2 boincer umatlas      4096 Jan  7 08:11 shared
[2026-01-07 11:11:42] -rw-r--r-- 2 boincer umatlas    592398 Jan  7 08:11 input.tar.gz
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas         0 Jan  7 08:11 boinc_lockfile
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas      2515 Jan  7 08:11 pandaJob.out
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas        57 Jan  7 08:12 setup.sh.local
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas    989080 Jan  7 08:12 agis_schedconf.cvmfs.json
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas   1516240 Jan  7 08:12 agis_ddmendpoints.agis.ALL.json
[2026-01-07 11:11:42] drwx------ 5 boincer umatlas      4096 Jan  7 08:12 pilot3
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas      5909 Jan  7 11:04 init_data.xml
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas 219798974 Jan  7 11:10 HITS.47898826._007651.pool.root.1
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas       530 Jan  7 11:10 boinc_task_state.xml
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas      1050 Jan  7 11:10 memory_monitor_summary.json
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas    406143 Jan  7 11:10 log.47898826._007651.job.log.tgz.1
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas        95 Jan  7 11:10 pilot_heartbeat.json
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas      7853 Jan  7 11:10 heartbeat.json
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas      8192 Jan  7 11:11 boinc_mmap_file
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas        28 Jan  7 11:11 wrapper_checkpoint.txt
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas      5004 Jan  7 11:11 pilotlog.txt
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas   1482262 Jan  7 11:11 log.47898826._007651.job.log.1
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas       357 Jan  7 11:11 output.list
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas       620 Jan  7 11:11 runtime_log
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas   1904640 Jan  7 11:11 result.tar.gz
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas      9343 Jan  7 11:11 runtime_log.err
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas       663 Jan  7 11:11 MdYMDmvPix8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmw2hKDmykcl5m.diag
[2026-01-07 11:11:42] -rw-r--r-- 1 boincer umatlas     21035 Jan  7 11:11 stderr.txt
[2026-01-07 11:11:42] HITS file was successfully produced:
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas 219798974 Jan  7 11:10 shared/HITS.pool.root.1
[2026-01-07 11:11:42]  *** Contents of shared directory: ***
[2026-01-07 11:11:42] total 434896
[2026-01-07 11:11:42] -rw-r--r-- 2 boincer umatlas 223013063 Jan  7 08:11 ATLAS.root_0
[2026-01-07 11:11:42] -rw-r--r-- 2 boincer umatlas     15847 Jan  7 08:11 start_atlas.sh
[2026-01-07 11:11:42] -rw-r--r-- 2 boincer umatlas    592398 Jan  7 08:11 input.tar.gz
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas 219798974 Jan  7 11:10 HITS.pool.root.1
[2026-01-07 11:11:42] -rw------- 1 boincer umatlas   1904640 Jan  7 11:11 result.tar.gz
11:11:44 (24256): run_atlas exited; CPU time 80181.833281
11:11:44 (24256): called boinc_finish(0)

</stderr_txt>
]]>

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