Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:31:11 (1079): wrapper (7.7.26015): starting
20:31:11 (1079): wrapper: running run_atlas (--nthreads 8)
[2026-01-07 20:31:11] Arguments: --nthreads 8
[2026-01-07 20:31:11] Threads: 8
[2026-01-07 20:31:11] Checking for CVMFS
[2026-01-07 20:31:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-07 20:31:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-07 20:31:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-07 20:31:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-07 20:31:14] 2.11.2.0 18097 32957 124464 154878 0 60 19546699 25165824 96 130560 0 14013130 99.732 12711260 2654 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-07 20:31:14] CVMFS is ok
[2026-01-07 20:31:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-07 20:31:14] Checking for apptainer binary...
[2026-01-07 20:31:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-07 20:31:14] Running /usr/bin/apptainer --version
[2026-01-07 20:31:15] apptainer version 1.3.2-1.el7
[2026-01-07 20:31:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-07 20:31:36] cg-vwn387.simple-grid.lan
[2026-01-07 20:31:36] apptainer works
[2026-01-07 20:31:36] Set ATHENA_PROC_NUMBER=8
[2026-01-07 20:31:36] Set ATHENA_CORE_NUMBER=8
[2026-01-07 20:31:36] Starting ATLAS job with PandaID=6961933662
[2026-01-07 20:31:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-08 02:45:56]  *** The last 200 lines of the pilot log: ***
[2026-01-08 02:45:56] 2026-01-08 01:45:00,551 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-08 02:45:56] 2026-01-08 01:45:00,552 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-08 02:45:56] 2026-01-08 01:45:00,561 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6961933662/memory_monitor_summary.json (trf name=prmon)
[2026-01-08 02:45:56] 2026-01-08 01:45:00,562 | INFO     | extracted standard info from prmon json
[2026-01-08 02:45:56] 2026-01-08 01:45:00,562 | INFO     | extracted standard memory fields from prmon json
[2026-01-08 02:45:56] 2026-01-08 01:45:00,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-08 02:45:56] 2026-01-08 01:45:00,563 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-08 02:45:56] 2026-01-08 01:45:00,563 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-08 02:45:56] 2026-01-08 01:45:00,571 | INFO     | fitting pss+swap vs Time
[2026-01-08 02:45:56] 2026-01-08 01:45:00,571 | INFO     | sum of square deviations: 13639518992.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,576 | INFO     | sum of deviations: 131472903805.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,576 | INFO     | mean x: 1767825843.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,576 | INFO     | mean y: 2449511.028328612
[2026-01-08 02:45:56] 2026-01-08 01:45:00,576 | INFO     | intersect: -17037828605.601316
[2026-01-08 02:45:56] 2026-01-08 01:45:00,577 | INFO     | chi2: 8.210994221764825
[2026-01-08 02:45:56] 2026-01-08 01:45:00,577 | INFO     | sum of square deviations: 13068103627.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,582 | INFO     | sum of deviations: 176710526405.5
[2026-01-08 02:45:56] 2026-01-08 01:45:00,582 | INFO     | mean x: 1767825690.5
[2026-01-08 02:45:56] 2026-01-08 01:45:00,582 | INFO     | mean y: 2461475.7327586208
[2026-01-08 02:45:56] 2026-01-08 01:45:00,582 | INFO     | intersect: -23902568456.53574
[2026-01-08 02:45:56] 2026-01-08 01:45:00,583 | INFO     | chi2: 6.700177494890788
[2026-01-08 02:45:56] 2026-01-08 01:45:00,583 | INFO     | current chi2=6.700177494890788 (change=18.399924370538777 %)
[2026-01-08 02:45:56] 2026-01-08 01:45:00,583 | INFO     | right removable region: 347
[2026-01-08 02:45:56] 2026-01-08 01:45:00,584 | INFO     | sum of square deviations: 13068103627.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,600 | INFO     | sum of deviations: 8753900526.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,600 | INFO     | mean x: 1767825995.5
[2026-01-08 02:45:56] 2026-01-08 01:45:00,601 | INFO     | mean y: 2482244.879310345
[2026-01-08 02:45:56] 2026-01-08 01:45:00,601 | INFO     | intersect: -1181727289.5408382
[2026-01-08 02:45:56] 2026-01-08 01:45:00,601 | INFO     | chi2: 3.526960265253465
[2026-01-08 02:45:56] 2026-01-08 01:45:00,601 | INFO     | current chi2=3.526960265253465 (change=57.045880559694275 %)
[2026-01-08 02:45:56] 2026-01-08 01:45:00,602 | INFO     | sum of square deviations: 12512874612.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,606 | INFO     | sum of deviations: -63521944106.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,606 | INFO     | mean x: 1767826148.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,606 | INFO     | mean y: 2502041.588921283
[2026-01-08 02:45:56] 2026-01-08 01:45:00,607 | INFO     | intersect: 8976918971.707302
[2026-01-08 02:45:56] 2026-01-08 01:45:00,607 | INFO     | chi2: 1.790793622819614
[2026-01-08 02:45:56] 2026-01-08 01:45:00,607 | INFO     | current chi2=1.790793622819614 (change=49.22557987222125 %)
[2026-01-08 02:45:56] 2026-01-08 01:45:00,608 | INFO     | sum of square deviations: 11973599384.5
[2026-01-08 02:45:56] 2026-01-08 01:45:00,612 | INFO     | sum of deviations: -70196381258.5
[2026-01-08 02:45:56] 2026-01-08 01:45:00,612 | INFO     | mean x: 1767826300.5
[2026-01-08 02:45:56] 2026-01-08 01:45:00,612 | INFO     | mean y: 2503920.4526627217
[2026-01-08 02:45:56] 2026-01-08 01:45:00,612 | INFO     | intersect: 10366556115.93069
[2026-01-08 02:45:56] 2026-01-08 01:45:00,613 | INFO     | chi2: 1.7634360997096665
[2026-01-08 02:45:56] 2026-01-08 01:45:00,613 | INFO     | current chi2=1.7634360997096665 (change=1.5276759287802728 %)
[2026-01-08 02:45:56] 2026-01-08 01:45:00,613 | INFO     | left removable region: 30
[2026-01-08 02:45:56] 2026-01-08 01:45:00,614 | INFO     | sum of square deviations: 9877610318.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,617 | INFO     | sum of deviations: 5515442795.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,617 | INFO     | mean x: 1767826575.0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,618 | INFO     | mean y: 2507985.1514195586
[2026-01-08 02:45:56] 2026-01-08 01:45:00,618 | INFO     | intersect: -984607929.729854
[2026-01-08 02:45:56] 2026-01-08 01:45:00,618 | INFO     | chi2: 0.04459379847777706
[2026-01-08 02:45:56] 2026-01-08 01:45:00,619 | INFO     | current memory leak: 0.56 B/s (using 317 data points, chi2=0.04)
[2026-01-08 02:45:56] 2026-01-08 01:45:00,619 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-08 02:45:56] 2026-01-08 01:45:00,620 | INFO     | ..............................
[2026-01-08 02:45:56] 2026-01-08 01:45:00,620 | INFO     | . Timing measurements:
[2026-01-08 02:45:56] 2026-01-08 01:45:00,620 | INFO     | . get job = 0 s
[2026-01-08 02:45:56] 2026-01-08 01:45:00,620 | INFO     | . initial setup = 19 s
[2026-01-08 02:45:56] 2026-01-08 01:45:00,620 | INFO     | . payload setup = 156 s
[2026-01-08 02:45:56] 2026-01-08 01:45:00,620 | INFO     | . stage-in = 0 s
[2026-01-08 02:45:56] 2026-01-08 01:45:00,620 | INFO     | . payload execution = 21650 s
[2026-01-08 02:45:56] 2026-01-08 01:45:00,620 | INFO     | . stage-out = 4 s
[2026-01-08 02:45:56] 2026-01-08 01:45:00,621 | INFO     | . log creation = 1 s
[2026-01-08 02:45:56] 2026-01-08 01:45:00,621 | INFO     | ..............................
[2026-01-08 02:45:56] 2026-01-08 01:45:00,757 | INFO     | 
[2026-01-08 02:45:56] 2026-01-08 01:45:00,758 | INFO     | job summary report
[2026-01-08 02:45:56] 2026-01-08 01:45:00,758 | INFO     | --------------------------------------------------
[2026-01-08 02:45:56] 2026-01-08 01:45:00,758 | INFO     | PanDA job id: 6961933662
[2026-01-08 02:45:56] 2026-01-08 01:45:00,758 | INFO     | task id: 47898826
[2026-01-08 02:45:56] 2026-01-08 01:45:00,758 | INFO     | errors: (none)
[2026-01-08 02:45:56] 2026-01-08 01:45:00,758 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-08 02:45:56] 2026-01-08 01:45:00,758 | INFO     | pilot state: finished 
[2026-01-08 02:45:56] 2026-01-08 01:45:00,759 | INFO     | transexitcode: 0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,759 | INFO     | exeerrorcode: 0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,759 | INFO     | exeerrordiag: 
[2026-01-08 02:45:56] 2026-01-08 01:45:00,759 | INFO     | exitcode: 0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,759 | INFO     | exitmsg: OK
[2026-01-08 02:45:56] 2026-01-08 01:45:00,759 | INFO     | cpuconsumptiontime: 80179 s
[2026-01-08 02:45:56] 2026-01-08 01:45:00,759 | INFO     | nevents: 400
[2026-01-08 02:45:56] 2026-01-08 01:45:00,759 | INFO     | neventsw: 0
[2026-01-08 02:45:56] 2026-01-08 01:45:00,759 | INFO     | pid: 11282
[2026-01-08 02:45:56] 2026-01-08 01:45:00,760 | INFO     | pgrp: 11282
[2026-01-08 02:45:56] 2026-01-08 01:45:00,760 | INFO     | corecount: 8
[2026-01-08 02:45:56] 2026-01-08 01:45:00,760 | INFO     | event service: False
[2026-01-08 02:45:56] 2026-01-08 01:45:00,760 | INFO     | sizes: {0: 2283688, 1: 2283943, 12: 2283943, 23: 2283971, 33: 2283999, 44: 2284055, 55: 2284211, 66: 2284239, 76: 2284267, 87: 2284323, 98: 2284351, 106: 2284921, 
[2026-01-08 02:45:56] 2026-01-08 01:45:00,760 | INFO     | --------------------------------------------------
[2026-01-08 02:45:56] 2026-01-08 01:45:00,760 | INFO     | 
[2026-01-08 02:45:56] 2026-01-08 01:45:00,760 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-01-08 02:45:56] 2026-01-08 01:45:01,255 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,255 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,255 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,255 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,256 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,256 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,256 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,256 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,256 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,257 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,257 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,257 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,257 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,257 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-08 02:45:56] 2026-01-08 01:45:01,257 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,257 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-08 02:45:56] 2026-01-08 01:45:01,257 | INFO     | job 6961933662 has completed (purged errors)
[2026-01-08 02:45:56] 2026-01-08 01:45:01,258 | INFO     | overall cleanup function is called
[2026-01-08 02:45:56] 2026-01-08 01:45:02,267 | INFO     | --- collectZombieJob: --- 10, [11282]
[2026-01-08 02:45:56] 2026-01-08 01:45:02,268 | INFO     | zombie collector waiting for pid 11282
[2026-01-08 02:45:56] 2026-01-08 01:45:02,268 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-08 02:45:56] 2026-01-08 01:45:02,268 | INFO     | collected zombie processes
[2026-01-08 02:45:56] 2026-01-08 01:45:02,268 | INFO     | will attempt to kill all subprocesses of pid=11282
[2026-01-08 02:45:56] 2026-01-08 01:45:02,359 | INFO     | process IDs to be killed: [11282] (in reverse order)
[2026-01-08 02:45:56] 2026-01-08 01:45:03,362 | WARNING  | found no corresponding commands to process id(s)
[2026-01-08 02:45:56] 2026-01-08 01:45:03,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-08 02:45:56] 2026-01-08 01:45:03,364 | INFO     | did not find any defunct processes belonging to 11282
[2026-01-08 02:45:56] 2026-01-08 01:45:03,366 | INFO     | did not find any defunct processes belonging to 11282
[2026-01-08 02:45:56] 2026-01-08 01:45:03,366 | INFO     | ready for new job
[2026-01-08 02:45:56] 2026-01-08 01:45:03,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-08 02:45:56] 2026-01-08 01:45:03,369 | INFO     | ***************************************
[2026-01-08 02:45:56] 2026-01-08 01:45:03,369 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-08 02:45:56] 2026-01-08 01:45:03,369 | INFO     | ***************************************
[2026-01-08 02:45:56] 2026-01-08 01:45:03,369 | INFO     | 
[2026-01-08 02:45:56] 2026-01-08 01:45:03,370 | INFO     | pilot is running in a VM
[2026-01-08 02:45:56] 2026-01-08 01:45:03,370 | INFO     | architecture information:
[2026-01-08 02:45:56] 2026-01-08 01:45:03,390 | INFO     | executing command: cat /etc/os-release
[2026-01-08 02:45:56] 2026-01-08 01:45:03,696 | INFO     | cat /etc/os-release:
[2026-01-08 02:45:56] NAME="CentOS Linux"
[2026-01-08 02:45:56] VERSION="7 (Core)"
[2026-01-08 02:45:56] ID="centos"
[2026-01-08 02:45:56] ID_LIKE="rhel fedora"
[2026-01-08 02:45:56] VERSION_ID="7"
[2026-01-08 02:45:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-08 02:45:56] ANSI_COLOR="0;31"
[2026-01-08 02:45:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-08 02:45:56] HOME_URL="https://www.centos.org/"
[2026-01-08 02:45:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-08 02:45:56] 
[2026-01-08 02:45:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-08 02:45:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-08 02:45:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-08 02:45:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-08 02:45:56] 
[2026-01-08 02:45:56] 2026-01-08 01:45:03,696 | INFO     | ***************************************
[2026-01-08 02:45:56] 2026-01-08 01:45:04,199 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-01-08 02:45:56] 2026-01-08 01:45:04,749 | INFO     | sufficient remaining disk space (496725131264 B)
[2026-01-08 02:45:56] 2026-01-08 01:45:04,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-08 02:45:56] 2026-01-08 01:45:04,750 | INFO     | current server update state: UPDATING_FINAL
[2026-01-08 02:45:56] 2026-01-08 01:45:04,750 | INFO     | update_server=False
[2026-01-08 02:45:56] 2026-01-08 01:45:04,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-08 02:45:56] 2026-01-08 01:45:04,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-08 02:45:56] 2026-01-08 01:45:05,092 | INFO     | all payload control threads have been joined
[2026-01-08 02:45:56] 2026-01-08 01:45:05,300 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-08 02:45:56] 2026-01-08 01:45:05,301 | INFO     | aborting loop
[2026-01-08 02:45:56] 2026-01-08 01:45:05,756 | INFO     | [job] retrieve thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:05,760 | INFO     | all data control threads have been joined
[2026-01-08 02:45:56] 2026-01-08 01:45:05,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-08 02:45:56] 2026-01-08 01:45:06,063 | INFO     | [payload] validate_pre thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:06,098 | INFO     | [payload] control thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:06,134 | INFO     | all job control threads have been joined
[2026-01-08 02:45:56] 2026-01-08 01:45:06,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-08 02:45:56] 2026-01-08 01:45:06,306 | INFO     | [job] job monitor thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:06,344 | INFO     | [job] create_data_payload thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:06,592 | INFO     | [data] copytool_in thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:06,758 | INFO     | [data] copytool_out thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:06,764 | INFO     | [payload] validate_post thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:06,766 | INFO     | [data] control thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:06,778 | INFO     | [job] queue monitor thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:06,888 | INFO     | [job] validate thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:07,058 | INFO     | [payload] execute_payloads thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:07,140 | INFO     | [job] control thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:07,253 | INFO     | [payload] failed_post thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:10,165 | INFO     | [data] queue_monitor thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:15,679 | INFO     | job.realtimelogging is not enabled
[2026-01-08 02:45:56] 2026-01-08 01:45:16,685 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-08 02:45:56] 2026-01-08 01:45:32,801 | INFO     | PID=4810 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-08 02:45:56] 2026-01-08 01:45:32,801 | INFO     | .. there are 2 such processes running
[2026-01-08 02:45:56] 2026-01-08 01:45:32,802 | INFO     | found 0 job(s) in 20 queues
[2026-01-08 02:45:56] 2026-01-08 01:45:32,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-08 02:45:56] 2026-01-08 01:45:32,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-08 02:45:56] 2026-01-08 01:45:46,060 | INFO     | [monitor] cgroup control has ended
[2026-01-08 02:45:56] 2026-01-08 01:45:46,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660368275264)>', '<ExcThread(monitor, started 140660061476608)>']
[2026-01-08 02:45:56] 2026-01-08 01:45:46,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-08 02:45:56] 2026-01-08 01:45:46,887 | INFO     | [monitor] control thread has ended
[2026-01-08 02:45:56] 2026-01-08 01:45:51,358 | INFO     | all workflow threads have been joined
[2026-01-08 02:45:56] 2026-01-08 01:45:51,359 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-08 02:45:56] 2026-01-08 01:45:51,359 | INFO     | traces error code: 0
[2026-01-08 02:45:56] 2026-01-08 01:45:51,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-08 02:45:56] 2026-01-08 01:45:51,562 [wrapper] ==== pilot stdout END ====
[2026-01-08 02:45:56] 2026-01-08 01:45:51,603 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-08 02:45:56] 2026-01-08 01:45:51,695 [wrapper] pilotpid: 4810
[2026-01-08 02:45:56] 2026-01-08 01:45:51,786 [wrapper] Pilot exit status: 0
[2026-01-08 02:45:56] 2026-01-08 01:45:52,283 [wrapper] pandaids: 6961933662
[2026-01-08 02:45:56] 2026-01-08 01:45:52,728 [wrapper] cleanup supervisor_pilot 10583 4811
[2026-01-08 02:45:56] 2026-01-08 01:45:52,826 [wrapper] Test setup, not cleaning
[2026-01-08 02:45:56] 2026-01-08 01:45:52,851 [wrapper] apfmon messages muted
[2026-01-08 02:45:56] 2026-01-08 01:45:52,907 [wrapper] ==== wrapper stdout END ====
[2026-01-08 02:45:56] 2026-01-08 01:45:52,957 [wrapper] ==== wrapper stderr END ====
[2026-01-08 02:45:56]  *** Error codes and diagnostics ***
[2026-01-08 02:45:56]     "exeErrorCode": 0,
[2026-01-08 02:45:56]     "exeErrorDiag": "",
[2026-01-08 02:45:56]     "pilotErrorCode": 0,
[2026-01-08 02:45:56]     "pilotErrorDiag": "",
[2026-01-08 02:45:56]  *** Listing of results directory ***
[2026-01-08 02:45:56] total 445000
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc    579449 Jan  7 14:00 pilot3.tar.gz
[2026-01-08 02:45:56] -rwx------. 1 boinc boinc     36322 Jan  7 14:04 runpilot2-wrapper.sh
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc      5112 Jan  7 14:05 queuedata.json
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc       100 Jan  7 20:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-08 02:45:56] -rwxr-xr-x. 1 boinc boinc      7986 Jan  7 20:31 run_atlas
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc       105 Jan  7 20:31 job.xml
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc      6391 Jan  7 20:31 init_data.xml
[2026-01-08 02:45:56] -rw-r--r--. 2 boinc boinc 224580300 Jan  7 20:31 EVNT.47898824._000114.pool.root.1
[2026-01-08 02:45:56] -rw-r--r--. 2 boinc boinc     15847 Jan  7 20:31 start_atlas.sh
[2026-01-08 02:45:56] drwxrwx--x. 2 boinc boinc        68 Jan  7 20:31 shared
[2026-01-08 02:45:56] -rw-r--r--. 2 boinc boinc    592402 Jan  7 20:31 input.tar.gz
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc         0 Jan  7 20:31 boinc_lockfile
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc      2516 Jan  7 20:31 pandaJob.out
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc    989785 Jan  7 20:35 agis_schedconf.cvmfs.json
[2026-01-08 02:45:56] drwx------. 5 boinc boinc      4096 Jan  7 20:36 pilot3
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc 220198744 Jan  8 02:41 HITS.47898826._007268.pool.root.1
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc       531 Jan  8 02:42 boinc_task_state.xml
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc      1016 Jan  8 02:43 memory_monitor_summary.json
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc   1516240 Jan  8 02:43 agis_ddmendpoints.agis.ALL.json
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc    564840 Jan  8 02:43 log.47898826._007268.job.log.tgz.1
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc      7778 Jan  8 02:45 heartbeat.json
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc        95 Jan  8 02:45 pilot_heartbeat.json
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc        28 Jan  8 02:45 wrapper_checkpoint.txt
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc      8192 Jan  8 02:45 boinc_mmap_file
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc      4956 Jan  8 02:45 pilotlog.txt
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc   2933906 Jan  8 02:45 log.47898826._007268.job.log.1
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc       357 Jan  8 02:45 output.list
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc       620 Jan  8 02:45 runtime_log
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc   3522560 Jan  8 02:45 result.tar.gz
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc      8833 Jan  8 02:45 runtime_log.err
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc       657 Jan  8 02:45 oDCNDmROix8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSzcKDmtrUjpm.diag
[2026-01-08 02:45:56] -rw-r--r--. 1 boinc boinc     20730 Jan  8 02:45 stderr.txt
[2026-01-08 02:45:56] HITS file was successfully produced:
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc 220198744 Jan  8 02:41 shared/HITS.pool.root.1
[2026-01-08 02:45:56]  *** Contents of shared directory: ***
[2026-01-08 02:45:56] total 438396
[2026-01-08 02:45:56] -rw-r--r--. 2 boinc boinc 224580300 Jan  7 20:31 ATLAS.root_0
[2026-01-08 02:45:56] -rw-r--r--. 2 boinc boinc     15847 Jan  7 20:31 start_atlas.sh
[2026-01-08 02:45:56] -rw-r--r--. 2 boinc boinc    592402 Jan  7 20:31 input.tar.gz
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc 220198744 Jan  8 02:41 HITS.pool.root.1
[2026-01-08 02:45:56] -rw-------. 1 boinc boinc   3522560 Jan  8 02:45 result.tar.gz
02:45:57 (1079): run_atlas exited; CPU time 80404.627844
02:45:57 (1079): called boinc_finish(0)

</stderr_txt>
]]>

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