Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:21:41 (27420): wrapper (7.7.26015): starting
12:21:41 (27420): wrapper: running run_atlas (--nthreads 8)
[2025-12-28 12:21:41] Arguments: --nthreads 8
[2025-12-28 12:21:41] Threads: 8
[2025-12-28 12:21:41] Checking for CVMFS
[2025-12-28 12:21:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-28 12:21:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-28 12:21:42] Running cvmfs_config stat atlas.cern.ch
[2025-12-28 12:21:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-28 12:21:42] 2.11.2.0 23418 122838 132004 154521 3 1 14926082 18432000 1 130560 0 85755773 99.985 4528763 29965 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-28 12:21:42] CVMFS is ok
[2025-12-28 12:21:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-28 12:21:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-28 12:21:42] Further information can be found at the LHC@home message board.
[2025-12-28 12:21:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-28 12:21:42] Checking for apptainer binary...
[2025-12-28 12:21:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-28 12:21:42] Running /usr/bin/apptainer --version
[2025-12-28 12:21:42] apptainer version 1.3.2-1.el7
[2025-12-28 12:21:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-28 12:21:43] c-206-24.aglt2.org
[2025-12-28 12:21:43] apptainer works
[2025-12-28 12:21:43] Set ATHENA_PROC_NUMBER=8
[2025-12-28 12:21:43] Set ATHENA_CORE_NUMBER=8
[2025-12-28 12:21:43] Starting ATLAS job with PandaID=6937268094
[2025-12-28 12:21:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-28 14:55:23]  *** The last 200 lines of the pilot log: ***
[2025-12-28 14:55:23] 2025-12-28 19:54:47,464 | INFO     | total number of processed events: 400 (read)
[2025-12-28 14:55:23] 2025-12-28 19:54:47,464 | INFO     | executing command: lscpu
[2025-12-28 14:55:23] 2025-12-28 19:54:47,492 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-28 14:55:23] 2025-12-28 19:54:48,301 | INFO     | time since job start (9167s) is within the limit (174528.0s)
[2025-12-28 14:55:23] 2025-12-28 19:54:49,491 | WARNING  | process 5596 can no longer be monitored (due to stat problems) - aborting
[2025-12-28 14:55:23] 2025-12-28 19:54:49,491 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6937268094/memory_monitor_summary.json (trf name=prmon)
[2025-12-28 14:55:23] 2025-12-28 19:54:49,592 | INFO     | number of running child processes to parent process 5596: 1
[2025-12-28 14:55:23] 2025-12-28 19:54:49,592 | INFO     | maximum number of monitored processes: 6
[2025-12-28 14:55:23] 2025-12-28 19:54:50,307 | INFO     | time since job start (9169s) is within the limit (174528.0s)
[2025-12-28 14:55:23] 2025-12-28 19:54:52,062 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-28 14:55:23] 2025-12-28 19:54:52,068 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1657.0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,072 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6937268094/memory_monitor_summary.json (trf name=prmon)
[2025-12-28 14:55:23] 2025-12-28 19:54:52,073 | INFO     | extracted standard info from prmon json
[2025-12-28 14:55:23] 2025-12-28 19:54:52,073 | INFO     | extracted standard memory fields from prmon json
[2025-12-28 14:55:23] 2025-12-28 19:54:52,073 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-28 14:55:23] 2025-12-28 19:54:52,073 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-28 14:55:23] 2025-12-28 19:54:52,074 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-28 14:55:23] 2025-12-28 19:54:52,076 | INFO     | fitting pss+swap vs Time
[2025-12-28 14:55:23] 2025-12-28 19:54:52,076 | INFO     | sum of square deviations: 1046484737.5
[2025-12-28 14:55:23] 2025-12-28 19:54:52,077 | INFO     | sum of deviations: -8447572342.500002
[2025-12-28 14:55:23] 2025-12-28 19:54:52,077 | INFO     | mean x: 1766947094.5
[2025-12-28 14:55:23] 2025-12-28 19:54:52,077 | INFO     | mean y: 2564596.3
[2025-12-28 14:55:23] 2025-12-28 19:54:52,077 | INFO     | intersect: 14265948352.681767
[2025-12-28 14:55:23] 2025-12-28 19:54:52,078 | INFO     | chi2: 1.9901948972015906
[2025-12-28 14:55:23] 2025-12-28 19:54:52,078 | INFO     | sum of square deviations: 945282840.0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,079 | INFO     | sum of deviations: -7592677137.000002
[2025-12-28 14:55:23] 2025-12-28 19:54:52,079 | INFO     | mean x: 1766946942.0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,079 | INFO     | mean y: 2565885.2
[2025-12-28 14:55:23] 2025-12-28 19:54:52,079 | INFO     | intersect: 14194992829.939068
[2025-12-28 14:55:23] 2025-12-28 19:54:52,079 | INFO     | chi2: 1.990353085773138
[2025-12-28 14:55:23] 2025-12-28 19:54:52,079 | INFO     | current chi2=1.990353085773138 (change=-0.007948395997286356 %)
[2025-12-28 14:55:23] 2025-12-28 19:54:52,079 | INFO     | right removable region: 144
[2025-12-28 14:55:23] 2025-12-28 19:54:52,080 | INFO     | sum of square deviations: 945282840.0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,080 | INFO     | sum of deviations: -36531197611.99999
[2025-12-28 14:55:23] 2025-12-28 19:54:52,081 | INFO     | mean x: 1766947247.0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,081 | INFO     | mean y: 2606411.1793103446
[2025-12-28 14:55:23] 2025-12-28 19:54:52,081 | INFO     | intersect: 68287670223.547226
[2025-12-28 14:55:23] 2025-12-28 19:54:52,081 | INFO     | chi2: 0.15634708557891672
[2025-12-28 14:55:23] 2025-12-28 19:54:52,081 | INFO     | current chi2=0.15634708557891672 (change=92.14413192402634 %)
[2025-12-28 14:55:23] 2025-12-28 19:54:52,081 | INFO     | sum of square deviations: 850825255.0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,082 | INFO     | sum of deviations: -35082305726.00001
[2025-12-28 14:55:23] 2025-12-28 19:54:52,082 | INFO     | mean x: 1766947399.5
[2025-12-28 14:55:23] 2025-12-28 19:54:52,082 | INFO     | mean y: 2603999.314285714
[2025-12-28 14:55:23] 2025-12-28 19:54:52,082 | INFO     | intersect: 72859619592.98009
[2025-12-28 14:55:23] 2025-12-28 19:54:52,083 | INFO     | chi2: 0.13822706877063354
[2025-12-28 14:55:23] 2025-12-28 19:54:52,083 | INFO     | current chi2=0.13822706877063354 (change=11.589609579986087 %)
[2025-12-28 14:55:23] 2025-12-28 19:54:52,083 | INFO     | left removable region: 20
[2025-12-28 14:55:23] 2025-12-28 19:54:52,083 | INFO     | sum of square deviations: 591173875.0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,084 | INFO     | sum of deviations: -26282019580.000004
[2025-12-28 14:55:23] 2025-12-28 19:54:52,084 | INFO     | mean x: 1766947521.5
[2025-12-28 14:55:23] 2025-12-28 19:54:52,084 | INFO     | mean y: 2593940.129032258
[2025-12-28 14:55:23] 2025-12-28 19:54:52,084 | INFO     | intersect: 78556385507.61919
[2025-12-28 14:55:23] 2025-12-28 19:54:52,084 | INFO     | chi2: 0.1291493104162169
[2025-12-28 14:55:23] 2025-12-28 19:54:52,085 | INFO     | current memory leak: -44.46 B/s (using 124 data points, chi2=0.13)
[2025-12-28 14:55:23] 2025-12-28 19:54:52,085 | INFO     | could have reported an average CPU frequency of 1872 MHz (9 samples)
[2025-12-28 14:55:23] 2025-12-28 19:54:52,085 | INFO     | ..............................
[2025-12-28 14:55:23] 2025-12-28 19:54:52,085 | INFO     | . Timing measurements:
[2025-12-28 14:55:23] 2025-12-28 19:54:52,085 | INFO     | . get job = 0 s
[2025-12-28 14:55:23] 2025-12-28 19:54:52,085 | INFO     | . initial setup = 3 s
[2025-12-28 14:55:23] 2025-12-28 19:54:52,085 | INFO     | . payload setup = 7 s
[2025-12-28 14:55:23] 2025-12-28 19:54:52,085 | INFO     | . stage-in = 0 s
[2025-12-28 14:55:23] 2025-12-28 19:54:52,086 | INFO     | . payload execution = 9138 s
[2025-12-28 14:55:23] 2025-12-28 19:54:52,086 | INFO     | . stage-out = 0 s
[2025-12-28 14:55:23] 2025-12-28 19:54:52,086 | INFO     | . log creation = 0 s
[2025-12-28 14:55:23] 2025-12-28 19:54:52,086 | INFO     | ..............................
[2025-12-28 14:55:23] 2025-12-28 19:54:52,165 | INFO     | 
[2025-12-28 14:55:23] 2025-12-28 19:54:52,165 | INFO     | job summary report
[2025-12-28 14:55:23] 2025-12-28 19:54:52,166 | INFO     | --------------------------------------------------
[2025-12-28 14:55:23] 2025-12-28 19:54:52,166 | INFO     | PanDA job id: 6937268094
[2025-12-28 14:55:23] 2025-12-28 19:54:52,166 | INFO     | task id: 47905857
[2025-12-28 14:55:23] 2025-12-28 19:54:52,166 | INFO     | errors: (none)
[2025-12-28 14:55:23] 2025-12-28 19:54:52,166 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-28 14:55:23] 2025-12-28 19:54:52,166 | INFO     | pilot state: finished 
[2025-12-28 14:55:23] 2025-12-28 19:54:52,167 | INFO     | transexitcode: 0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,167 | INFO     | exeerrorcode: 0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,167 | INFO     | exeerrordiag: 
[2025-12-28 14:55:23] 2025-12-28 19:54:52,167 | INFO     | exitcode: 0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,167 | INFO     | exitmsg: OK
[2025-12-28 14:55:23] 2025-12-28 19:54:52,167 | INFO     | cpuconsumptiontime: 69782 s
[2025-12-28 14:55:23] 2025-12-28 19:54:52,168 | INFO     | nevents: 400
[2025-12-28 14:55:23] 2025-12-28 19:54:52,168 | INFO     | neventsw: 0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,168 | INFO     | pid: 5596
[2025-12-28 14:55:23] 2025-12-28 19:54:52,168 | INFO     | pgrp: 5596
[2025-12-28 14:55:23] 2025-12-28 19:54:52,168 | INFO     | corecount: 8
[2025-12-28 14:55:23] 2025-12-28 19:54:52,168 | INFO     | event service: False
[2025-12-28 14:55:23] 2025-12-28 19:54:52,169 | INFO     | sizes: {0: 2283687, 1: 2283886, 6: 2284148, 11: 2284176, 9149: 2312473, 9150: 2321655, 9155: 2321857}
[2025-12-28 14:55:23] 2025-12-28 19:54:52,169 | INFO     | --------------------------------------------------
[2025-12-28 14:55:23] 2025-12-28 19:54:52,169 | INFO     | 
[2025-12-28 14:55:23] 2025-12-28 19:54:52,169 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-28 14:55:23] 2025-12-28 19:54:52,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,194 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,195 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-28 14:55:23] 2025-12-28 19:54:52,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,196 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-28 14:55:23] 2025-12-28 19:54:52,196 | INFO     | job 6937268094 has completed (purged errors)
[2025-12-28 14:55:23] 2025-12-28 19:54:52,196 | INFO     | overall cleanup function is called
[2025-12-28 14:55:23] 2025-12-28 19:54:53,204 | INFO     | --- collectZombieJob: --- 10, [5596]
[2025-12-28 14:55:23] 2025-12-28 19:54:53,204 | INFO     | zombie collector waiting for pid 5596
[2025-12-28 14:55:23] 2025-12-28 19:54:53,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-28 14:55:23] 2025-12-28 19:54:53,205 | INFO     | collected zombie processes
[2025-12-28 14:55:23] 2025-12-28 19:54:53,205 | INFO     | will attempt to kill all subprocesses of pid=5596
[2025-12-28 14:55:23] 2025-12-28 19:54:53,302 | INFO     | process IDs to be killed: [5596] (in reverse order)
[2025-12-28 14:55:23] 2025-12-28 19:54:53,354 | WARNING  | found no corresponding commands to process id(s)
[2025-12-28 14:55:23] 2025-12-28 19:54:53,354 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-28 14:55:23] 2025-12-28 19:54:53,358 | INFO     | did not find any defunct processes belonging to 5596
[2025-12-28 14:55:23] 2025-12-28 19:54:53,362 | INFO     | did not find any defunct processes belonging to 5596
[2025-12-28 14:55:23] 2025-12-28 19:54:53,362 | INFO     | ready for new job
[2025-12-28 14:55:23] 2025-12-28 19:54:53,363 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-28 14:55:23] 2025-12-28 19:54:53,364 | INFO     | ***************************************
[2025-12-28 14:55:23] 2025-12-28 19:54:53,364 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-28 14:55:23] 2025-12-28 19:54:53,365 | INFO     | ***************************************
[2025-12-28 14:55:23] 2025-12-28 19:54:53,365 | INFO     | 
[2025-12-28 14:55:23] 2025-12-28 19:54:53,366 | INFO     | architecture information:
[2025-12-28 14:55:23] 2025-12-28 19:54:53,366 | INFO     | executing command: cat /etc/os-release
[2025-12-28 14:55:23] 2025-12-28 19:54:53,380 | INFO     | cat /etc/os-release:
[2025-12-28 14:55:23] NAME="CentOS Linux"
[2025-12-28 14:55:23] VERSION="7 (Core)"
[2025-12-28 14:55:23] ID="centos"
[2025-12-28 14:55:23] ID_LIKE="rhel fedora"
[2025-12-28 14:55:23] VERSION_ID="7"
[2025-12-28 14:55:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-28 14:55:23] ANSI_COLOR="0;31"
[2025-12-28 14:55:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-28 14:55:23] HOME_URL="https://www.centos.org/"
[2025-12-28 14:55:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-28 14:55:23] 
[2025-12-28 14:55:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-28 14:55:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-28 14:55:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-28 14:55:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-28 14:55:23] 
[2025-12-28 14:55:23] 2025-12-28 19:54:53,381 | INFO     | ***************************************
[2025-12-28 14:55:23] 2025-12-28 19:54:53,883 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-28 14:55:23] 2025-12-28 19:54:53,900 | INFO     | sufficient remaining disk space (29198647296 B)
[2025-12-28 14:55:23] 2025-12-28 19:54:53,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-28 14:55:23] 2025-12-28 19:54:53,901 | INFO     | current server update state: UPDATING_FINAL
[2025-12-28 14:55:23] 2025-12-28 19:54:53,901 | INFO     | update_server=False
[2025-12-28 14:55:23] 2025-12-28 19:54:53,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-28 14:55:23] 2025-12-28 19:54:53,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-28 14:55:23] 2025-12-28 19:54:53,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-28 14:55:23] 2025-12-28 19:54:53,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-28 14:55:23] 2025-12-28 19:54:53,903 | INFO     | aborting loop
[2025-12-28 14:55:23] 2025-12-28 19:54:54,732 | INFO     | all data control threads have been joined
[2025-12-28 14:55:23] 2025-12-28 19:54:54,906 | INFO     | [job] retrieve thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:54,908 | INFO     | [job] queue monitor thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:54,908 | INFO     | [job] job monitor thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:55,032 | INFO     | [payload] validate_post thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:55,069 | INFO     | [job] create_data_payload thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:55,195 | INFO     | all job control threads have been joined
[2025-12-28 14:55:23] 2025-12-28 19:54:55,211 | INFO     | [payload] validate_pre thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:55,314 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-28 14:55:23] 2025-12-28 19:54:55,333 | INFO     | all payload control threads have been joined
[2025-12-28 14:55:23] 2025-12-28 19:54:55,688 | INFO     | [payload] failed_post thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:55,733 | INFO     | [data] control thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:55,831 | INFO     | [data] copytool_in thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:55,953 | INFO     | [payload] execute_payloads thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:56,201 | INFO     | [job] control thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:56,338 | INFO     | [payload] control thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:56,360 | INFO     | [job] validate thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:57,320 | INFO     | [data] copytool_out thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:54:57,908 | INFO     | [data] queue_monitor thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:55:04,843 | INFO     | job.realtimelogging is not enabled
[2025-12-28 14:55:23] 2025-12-28 19:55:05,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-28 14:55:23] 2025-12-28 19:55:13,331 | INFO     | [monitor] cgroup control has ended
[2025-12-28 14:55:23] 2025-12-28 19:55:13,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350674995008)>', '<ExcThread(monitor, started 140350236636928)>']
[2025-12-28 14:55:23] 2025-12-28 19:55:18,786 | INFO     | all workflow threads have been joined
[2025-12-28 14:55:23] 2025-12-28 19:55:18,786 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-28 14:55:23] 2025-12-28 19:55:18,787 | INFO     | traces error code: 0
[2025-12-28 14:55:23] 2025-12-28 19:55:18,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-28 14:55:23] 2025-12-28 19:55:23,515 | INFO     | PID=31474 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-28 14:55:23] 2025-12-28 19:55:23,516 | INFO     | found 0 job(s) in 20 queues
[2025-12-28 14:55:23] 2025-12-28 19:55:23,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-28 14:55:23] 2025-12-28 19:55:23,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-28 14:55:23] 2025-12-28 19:55:23,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-28 14:55:23] 2025-12-28 19:55:23,517 | INFO     | [monitor] control thread has ended
[2025-12-28 14:55:23] 2025-12-28 19:55:23,625 [wrapper] ==== pilot stdout END ====
[2025-12-28 14:55:23] 2025-12-28 19:55:23,629 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-28 14:55:23] 2025-12-28 19:55:23,632 [wrapper] pilotpid: 31474
[2025-12-28 14:55:23] 2025-12-28 19:55:23,636 [wrapper] Pilot exit status: 0
[2025-12-28 14:55:23] 2025-12-28 19:55:23,651 [wrapper] pandaids: 6937268094
[2025-12-28 14:55:23] 2025-12-28 19:55:23,694 [wrapper] cleanup supervisor_pilot 19993 31475
[2025-12-28 14:55:23] 2025-12-28 19:55:23,697 [wrapper] Test setup, not cleaning
[2025-12-28 14:55:23] 2025-12-28 19:55:23,701 [wrapper] apfmon messages muted
[2025-12-28 14:55:23] 2025-12-28 19:55:23,705 [wrapper] ==== wrapper stdout END ====
[2025-12-28 14:55:23] 2025-12-28 19:55:23,710 [wrapper] ==== wrapper stderr END ====
[2025-12-28 14:55:23]  *** Error codes and diagnostics ***
[2025-12-28 14:55:23]     "exeErrorCode": 0,
[2025-12-28 14:55:23]     "exeErrorDiag": "",
[2025-12-28 14:55:23]     "pilotErrorCode": 0,
[2025-12-28 14:55:23]     "pilotErrorDiag": "",
[2025-12-28 14:55:23]  *** Listing of results directory ***
[2025-12-28 14:55:23] total 402512
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas    579449 Dec 19 19:14 pilot3.tar.gz
[2025-12-28 14:55:23] -rwx------ 1 boincer umatlas     36322 Dec 19 19:15 runpilot2-wrapper.sh
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas      5112 Dec 19 19:16 queuedata.json
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas       100 Dec 28 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-28 14:55:23] -rwxr-xr-x 1 boincer umatlas      7986 Dec 28 12:21 run_atlas
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas       105 Dec 28 12:21 job.xml
[2025-12-28 14:55:23] -rw-r--r-- 2 boincer umatlas 197838222 Dec 28 12:21 EVNT.47905855._000048.pool.root.1
[2025-12-28 14:55:23] -rw-r--r-- 2 boincer umatlas     15847 Dec 28 12:21 start_atlas.sh
[2025-12-28 14:55:23] drwxrwx--x 2 boincer umatlas      4096 Dec 28 12:21 shared
[2025-12-28 14:55:23] -rw-r--r-- 2 boincer umatlas    592390 Dec 28 12:21 input.tar.gz
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas         0 Dec 28 12:21 boinc_lockfile
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas      2476 Dec 28 12:21 pandaJob.out
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas        57 Dec 28 12:21 setup.sh.local
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas    987727 Dec 28 12:21 agis_schedconf.cvmfs.json
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas   1516240 Dec 28 12:21 agis_ddmendpoints.agis.ALL.json
[2025-12-28 14:55:23] drwx------ 5 boincer umatlas      4096 Dec 28 12:22 pilot3
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas      5951 Dec 28 14:47 init_data.xml
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas 207076999 Dec 28 14:54 HITS.47905857._002388.pool.root.1
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas       529 Dec 28 14:54 boinc_task_state.xml
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas      1047 Dec 28 14:54 memory_monitor_summary.json
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas    379259 Dec 28 14:54 log.47905857._002388.job.log.tgz.1
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas      7844 Dec 28 14:54 heartbeat.json
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas      8192 Dec 28 14:55 boinc_mmap_file
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas        27 Dec 28 14:55 wrapper_checkpoint.txt
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas       745 Dec 28 14:55 pilotlog.txt
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas        95 Dec 28 14:55 pilot_heartbeat.json
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas   1292649 Dec 28 14:55 log.47905857._002388.job.log.1
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas       357 Dec 28 14:55 output.list
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas       620 Dec 28 14:55 runtime_log
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas   1689600 Dec 28 14:55 result.tar.gz
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas      9342 Dec 28 14:55 runtime_log.err
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas       661 Dec 28 14:55 Jx4LDmxnzq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmM8gKDmHWW2Wm.diag
[2025-12-28 14:55:23] -rw-r--r-- 1 boincer umatlas     21294 Dec 28 14:55 stderr.txt
[2025-12-28 14:55:23] HITS file was successfully produced:
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas 207076999 Dec 28 14:54 shared/HITS.pool.root.1
[2025-12-28 14:55:23]  *** Contents of shared directory: ***
[2025-12-28 14:55:23] total 397684
[2025-12-28 14:55:23] -rw-r--r-- 2 boincer umatlas 197838222 Dec 28 12:21 ATLAS.root_0
[2025-12-28 14:55:23] -rw-r--r-- 2 boincer umatlas     15847 Dec 28 12:21 start_atlas.sh
[2025-12-28 14:55:23] -rw-r--r-- 2 boincer umatlas    592390 Dec 28 12:21 input.tar.gz
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas 207076999 Dec 28 14:54 HITS.pool.root.1
[2025-12-28 14:55:23] -rw------- 1 boincer umatlas   1689600 Dec 28 14:55 result.tar.gz
14:55:25 (27420): run_atlas exited; CPU time 69248.642345
14:55:25 (27420): called boinc_finish(0)

</stderr_txt>
]]>

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