Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:50:18 (254382): wrapper (7.7.26015): starting
02:50:18 (254382): wrapper: running run_atlas (--nthreads 11)
[2025-12-24 02:50:18] Arguments: --nthreads 11
[2025-12-24 02:50:18] Threads: 11
[2025-12-24 02:50:18] Checking for CVMFS
[2025-12-24 02:50:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-24 02:50:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-24 02:50:18] Running cvmfs_config stat atlas.cern.ch
[2025-12-24 02:50:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-24 02:50:18] 2.13.3.0 9724 224 37636 154362 3 17 32064426 40960001 171 16776704 0 20168 99.906 10913 6658 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-24 02:50:18] CVMFS is ok
[2025-12-24 02:50:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-24 02:50:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-24 02:50:18] Further information can be found at the LHC@home message board.
[2025-12-24 02:50:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-24 02:50:18] Checking for apptainer binary...
[2025-12-24 02:50:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-24 02:50:18] Running /usr/bin/apptainer --version
[2025-12-24 02:50:18] apptainer version 1.4.5-2.el9
[2025-12-24 02:50:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-24 02:50:19] c-210-33-3.aglt2.org
[2025-12-24 02:50:19] apptainer works
[2025-12-24 02:50:19] Set ATHENA_PROC_NUMBER=11
[2025-12-24 02:50:19] Set ATHENA_CORE_NUMBER=11
[2025-12-24 02:50:19] Starting ATLAS job with PandaID=6931484645
[2025-12-24 02:50:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-24 04:10:38]  *** The last 200 lines of the pilot log: ***
[2025-12-24 04:10:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-24 04:10:38]  replicas=None
[2025-12-24 04:10:38]  scope=mc23_13p6TeV
[2025-12-24 04:10:38]  status=None
[2025-12-24 04:10:38]  status_code=0
[2025-12-24 04:10:38]  storage_token=
[2025-12-24 04:10:38]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6931484645/log.47905857._000232.job.log.tgz.1
[2025-12-24 04:10:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/7b/log.47905857._000232.job.log.tgz.1
[2025-12-24 04:10:38]  workdir=None
[2025-12-24 04:10:38] ]
[2025-12-24 04:10:38] 2025-12-24 09:09:30,644 | INFO     | transferring file log.47905857._000232.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6931484645/log.47905857._000232.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-24 04:10:38] 2025-12-24 09:09:30,644 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6931484645/log.47905857._000232.job.log.tgz.1 /tmp/boinchome/slots/2/log.47905857._000232.job
[2025-12-24 04:10:38] 2025-12-24 09:09:30,655 | INFO     | adding to output.list: log.47905857._000232.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/81/7b/log.47905857._000232.job.log.tg
[2025-12-24 04:10:38] 2025-12-24 09:09:30,655 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-24 04:10:38] 2025-12-24 09:09:30,655 | INFO     | summary of transferred files:
[2025-12-24 04:10:38] 2025-12-24 09:09:30,655 | INFO     |  -- lfn=log.47905857._000232.job.log.tgz.1, status_code=0, status=transferred
[2025-12-24 04:10:38] 2025-12-24 09:09:30,655 | INFO     | stage-out finished correctly
[2025-12-24 04:10:38] 2025-12-24 09:09:31,299 | INFO     | time since job start (4746s) is within the limit (174528.0s)
[2025-12-24 04:10:38] 2025-12-24 09:09:31,796 | WARNING  | process 295622 can no longer be monitored (due to stat problems) - aborting
[2025-12-24 04:10:38] 2025-12-24 09:09:31,796 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6931484645/memory_monitor_summary.json (trf name=prmon)
[2025-12-24 04:10:38] 2025-12-24 09:09:31,888 | INFO     | number of running child processes to parent process 295622: 1
[2025-12-24 04:10:38] 2025-12-24 09:09:31,888 | INFO     | maximum number of monitored processes: 6
[2025-12-24 04:10:38] 2025-12-24 09:09:32,544 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-24 04:10:38] 2025-12-24 09:09:33,304 | INFO     | time since job start (4748s) is within the limit (174528.0s)
[2025-12-24 04:10:38] 2025-12-24 09:09:33,450 | INFO     | job 6931484645 has state=finished
[2025-12-24 04:10:38] 2025-12-24 09:09:33,451 | INFO     | preparing for final server update for job 6931484645 in state='finished'
[2025-12-24 04:10:38] 2025-12-24 09:09:33,451 | INFO     | this job has now completed (state=finished)
[2025-12-24 04:10:38] 2025-12-24 09:09:33,451 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-24 04:10:38] 2025-12-24 09:09:33,451 | INFO     | log transfer has been attempted: DONE
[2025-12-24 04:10:38] 2025-12-24 09:09:33,451 | INFO     | job 6931484645 has finished - writing final server update
[2025-12-24 04:10:38] 2025-12-24 09:09:33,451 | INFO     | total number of processed events: 400 (read)
[2025-12-24 04:10:38] 2025-12-24 09:09:33,452 | INFO     | executing command: lscpu
[2025-12-24 04:10:38] 2025-12-24 09:09:33,482 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-24 04:10:38] 2025-12-24 09:09:34,391 | INFO     | monitor loop #357: job 0:6931484645 is in state 'finished'
[2025-12-24 04:10:38] 2025-12-24 09:09:34,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-24 04:10:38] 2025-12-24 09:09:35,309 | INFO     | time since job start (4750s) is within the limit (174528.0s)
[2025-12-24 04:10:38] 2025-12-24 09:09:35,310 | INFO     | 4751s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-24 04:10:38] 2025-12-24 09:09:35,496 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-24 04:10:38] 2025-12-24 09:09:35,500 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3302.669857142858
[2025-12-24 04:10:38] 2025-12-24 09:09:35,505 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6931484645/memory_monitor_summary.json (trf name=prmon)
[2025-12-24 04:10:38] 2025-12-24 09:09:35,506 | INFO     | extracted standard info from prmon json
[2025-12-24 04:10:38] 2025-12-24 09:09:35,506 | INFO     | extracted standard memory fields from prmon json
[2025-12-24 04:10:38] 2025-12-24 09:09:35,506 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-24 04:10:38] 2025-12-24 09:09:35,506 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-24 04:10:38] 2025-12-24 09:09:35,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-24 04:10:38] 2025-12-24 09:09:35,507 | INFO     | fitting pss+swap vs Time
[2025-12-24 04:10:38] 2025-12-24 09:09:35,507 | INFO     | sum of square deviations: 110960220.0
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | sum of deviations: -552901010.9999999
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | mean x: 1766565085.0
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | mean y: 2684881.591549296
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | intersect: 8805259547.48353
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | chi2: 0.006276781357612462
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | current memory leak: -4.98 B/s (using 71 data points, chi2=0.01)
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | could have reported an average CPU frequency of 3207 MHz (6 samples)
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | ..............................
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | . Timing measurements:
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | . get job = 0 s
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | . initial setup = 2 s
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | . payload setup = 3 s
[2025-12-24 04:10:38] 2025-12-24 09:09:35,508 | INFO     | . stage-in = 0 s
[2025-12-24 04:10:38] 2025-12-24 09:09:35,509 | INFO     | . payload execution = 4724 s
[2025-12-24 04:10:38] 2025-12-24 09:09:35,509 | INFO     | . stage-out = 0 s
[2025-12-24 04:10:38] 2025-12-24 09:09:35,509 | INFO     | . log creation = 0 s
[2025-12-24 04:10:38] 2025-12-24 09:09:35,509 | INFO     | ..............................
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | 
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | job summary report
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | --------------------------------------------------
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | PanDA job id: 6931484645
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | task id: 47905857
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | errors: (none)
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | pilot state: finished 
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | transexitcode: 0
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | exeerrorcode: 0
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | exeerrordiag: 
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | exitcode: 0
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | exitmsg: OK
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | cpuconsumptiontime: 48114 s
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | nevents: 400
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | neventsw: 0
[2025-12-24 04:10:38] 2025-12-24 09:09:35,693 | INFO     | pid: 295622
[2025-12-24 04:10:38] 2025-12-24 09:09:35,694 | INFO     | pgrp: 295622
[2025-12-24 04:10:38] 2025-12-24 09:09:35,694 | INFO     | corecount: 11
[2025-12-24 04:10:38] 2025-12-24 09:09:35,694 | INFO     | event service: False
[2025-12-24 04:10:38] 2025-12-24 09:09:35,694 | INFO     | sizes: {0: 2283908, 2: 2284170, 11: 2284198, 4731: 2310306, 4732: 2319304, 4734: 2319360, 4737: 2319682}
[2025-12-24 04:10:38] 2025-12-24 09:09:35,694 | INFO     | --------------------------------------------------
[2025-12-24 04:10:38] 2025-12-24 09:09:35,694 | INFO     | 
[2025-12-24 04:10:38] 2025-12-24 09:09:35,694 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-12-24 04:10:38] 2025-12-24 09:09:35,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,705 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,705 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,705 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,705 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,705 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | job 6931484645 has completed (purged errors)
[2025-12-24 04:10:38] 2025-12-24 09:09:35,706 | INFO     | overall cleanup function is called
[2025-12-24 04:10:38] 2025-12-24 09:09:36,713 | INFO     | --- collectZombieJob: --- 10, [295622]
[2025-12-24 04:10:38] 2025-12-24 09:09:36,713 | INFO     | zombie collector waiting for pid 295622
[2025-12-24 04:10:38] 2025-12-24 09:09:36,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-24 04:10:38] 2025-12-24 09:09:36,713 | INFO     | collected zombie processes
[2025-12-24 04:10:38] 2025-12-24 09:09:36,713 | INFO     | will attempt to kill all subprocesses of pid=295622
[2025-12-24 04:10:38] 2025-12-24 09:09:36,813 | INFO     | process IDs to be killed: [295622] (in reverse order)
[2025-12-24 04:10:38] 2025-12-24 09:09:36,849 | WARNING  | found no corresponding commands to process id(s)
[2025-12-24 04:10:38] 2025-12-24 09:09:36,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-24 04:10:38] 2025-12-24 09:09:36,852 | INFO     | did not find any defunct processes belonging to 295622
[2025-12-24 04:10:38] 2025-12-24 09:09:36,855 | INFO     | did not find any defunct processes belonging to 295622
[2025-12-24 04:10:38] 2025-12-24 09:09:36,856 | INFO     | ready for new job
[2025-12-24 04:10:38] 2025-12-24 09:09:36,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-24 04:10:38] 2025-12-24 09:09:36,857 | INFO     | ***************************************
[2025-12-24 04:10:38] 2025-12-24 09:09:36,857 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-24 04:10:38] 2025-12-24 09:09:36,857 | INFO     | ***************************************
[2025-12-24 04:10:38] 2025-12-24 09:09:36,857 | INFO     | 
[2025-12-24 04:10:38] 2025-12-24 09:09:36,859 | INFO     | architecture information:
[2025-12-24 04:10:38] 2025-12-24 09:09:36,859 | INFO     | executing command: cat /etc/os-release
[2025-12-24 04:10:38] 2025-12-24 09:09:36,865 | INFO     | cat /etc/os-release:
[2025-12-24 04:10:38] NAME="CentOS Linux"
[2025-12-24 04:10:38] VERSION="7 (Core)"
[2025-12-24 04:10:38] ID="centos"
[2025-12-24 04:10:38] ID_LIKE="rhel fedora"
[2025-12-24 04:10:38] VERSION_ID="7"
[2025-12-24 04:10:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-24 04:10:38] ANSI_COLOR="0;31"
[2025-12-24 04:10:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-24 04:10:38] HOME_URL="https://www.centos.org/"
[2025-12-24 04:10:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-24 04:10:38] 
[2025-12-24 04:10:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-24 04:10:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-24 04:10:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-24 04:10:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-24 04:10:38] 
[2025-12-24 04:10:38] 2025-12-24 09:09:36,865 | INFO     | ***************************************
[2025-12-24 04:10:38] 2025-12-24 09:09:37,368 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-12-24 04:10:38] 2025-12-24 09:09:37,376 | INFO     | sufficient remaining disk space (74845257728 B)
[2025-12-24 04:10:38] 2025-12-24 09:09:37,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-24 04:10:38] 2025-12-24 09:09:37,376 | INFO     | current server update state: UPDATING_FINAL
[2025-12-24 04:10:38] 2025-12-24 09:09:37,376 | INFO     | update_server=False
[2025-12-24 04:10:38] 2025-12-24 09:09:37,377 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-24 04:10:38] 2025-12-24 09:09:37,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-24 04:10:38] 2025-12-24 09:09:37,458 | INFO     | all data control threads have been joined
[2025-12-24 04:10:38] 2025-12-24 09:09:37,470 | INFO     | all payload control threads have been joined
[2025-12-24 04:10:38] 2025-12-24 09:09:37,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-24 04:10:38] 2025-12-24 09:09:37,900 | INFO     | aborting loop
[2025-12-24 04:10:38] 2025-12-24 09:09:38,030 | INFO     | all job control threads have been joined
[2025-12-24 04:10:38] 2025-12-24 09:09:38,382 | INFO     | [job] retrieve thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:38,382 | INFO     | [job] queue monitor thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:38,464 | INFO     | [data] control thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:38,475 | INFO     | [payload] control thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:38,485 | INFO     | [payload] validate_pre thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:38,492 | INFO     | [job] create_data_payload thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:38,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-24 04:10:38] 2025-12-24 09:09:38,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-24 04:10:38] 2025-12-24 09:09:38,744 | INFO     | [payload] validate_post thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:38,905 | INFO     | [job] job monitor thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:39,036 | INFO     | [job] control thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:39,344 | INFO     | [payload] failed_post thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:39,495 | INFO     | [data] copytool_in thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:39,707 | INFO     | [payload] execute_payloads thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:39,879 | INFO     | [job] validate thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:40,711 | INFO     | [data] copytool_out thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:42,596 | INFO     | [data] queue_monitor thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:09:48,357 | INFO     | job.realtimelogging is not enabled
[2025-12-24 04:10:38] 2025-12-24 09:09:49,362 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-24 04:10:38] 2025-12-24 09:10:08,503 | INFO     | PID=262038 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-24 04:10:38] 2025-12-24 09:10:08,503 | INFO     | .. there are 2 such processes running
[2025-12-24 04:10:38] 2025-12-24 09:10:08,503 | INFO     | found 0 job(s) in 20 queues
[2025-12-24 04:10:38] 2025-12-24 09:10:08,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-24 04:10:38] 2025-12-24 09:10:08,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-24 04:10:38] 2025-12-24 09:10:32,926 | INFO     | [monitor] cgroup control has ended
[2025-12-24 04:10:38] 2025-12-24 09:10:33,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139665983776576)>', '<ExcThread(monitor, started 139665625577216)>']
[2025-12-24 04:10:38] 2025-12-24 09:10:33,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-24 04:10:38] 2025-12-24 09:10:33,629 | INFO     | [monitor] control thread has ended
[2025-12-24 04:10:38] 2025-12-24 09:10:38,139 | INFO     | all workflow threads have been joined
[2025-12-24 04:10:38] 2025-12-24 09:10:38,140 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-24 04:10:38] 2025-12-24 09:10:38,140 | INFO     | traces error code: 0
[2025-12-24 04:10:38] 2025-12-24 09:10:38,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-24 04:10:38] 2025-12-24 09:10:38,216 [wrapper] ==== pilot stdout END ====
[2025-12-24 04:10:38] 2025-12-24 09:10:38,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-24 04:10:38] 2025-12-24 09:10:38,219 [wrapper] pilotpid: 262038
[2025-12-24 04:10:38] 2025-12-24 09:10:38,220 [wrapper] Pilot exit status: 0
[2025-12-24 04:10:38] 2025-12-24 09:10:38,226 [wrapper] pandaids: 6931484645
[2025-12-24 04:10:38] 2025-12-24 09:10:38,250 [wrapper] cleanup supervisor_pilot  445694 262039
[2025-12-24 04:10:38] 2025-12-24 09:10:38,251 [wrapper] Test setup, not cleaning
[2025-12-24 04:10:38] 2025-12-24 09:10:38,253 [wrapper] apfmon messages muted
[2025-12-24 04:10:38] 2025-12-24 09:10:38,255 [wrapper] ==== wrapper stdout END ====
[2025-12-24 04:10:38] 2025-12-24 09:10:38,256 [wrapper] ==== wrapper stderr END ====
[2025-12-24 04:10:38]  *** Error codes and diagnostics ***
[2025-12-24 04:10:38]     "exeErrorCode": 0,
[2025-12-24 04:10:38]     "exeErrorDiag": "",
[2025-12-24 04:10:38]     "pilotErrorCode": 0,
[2025-12-24 04:10:38]     "pilotErrorDiag": "",
[2025-12-24 04:10:38]  *** Listing of results directory ***
[2025-12-24 04:10:38] total 398236
[2025-12-24 04:10:38] -rwx------. 1 boincer umatlas     36322 Dec 16 12:39 runpilot2-wrapper.sh
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 12:40 queuedata.json
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 12:41 pilot3.tar.gz
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas       100 Dec 24 02:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-24 04:10:38] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 24 02:50 run_atlas
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas       105 Dec 24 02:50 job.xml
[2025-12-24 04:10:38] -rw-r--r--. 2 boincer umatlas 200555871 Dec 24 02:50 EVNT.47905855._000010.pool.root.1
[2025-12-24 04:10:38] -rw-r--r--. 2 boincer umatlas     15847 Dec 24 02:50 start_atlas.sh
[2025-12-24 04:10:38] drwxrwx--x. 2 boincer umatlas      4096 Dec 24 02:50 shared
[2025-12-24 04:10:38] -rw-r--r--. 2 boincer umatlas    592380 Dec 24 02:50 input.tar.gz
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas         0 Dec 24 02:50 boinc_lockfile
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas      2476 Dec 24 02:50 pandaJob.out
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas        57 Dec 24 02:50 setup.sh.local
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas    987357 Dec 24 02:50 agis_schedconf.cvmfs.json
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas   1516240 Dec 24 02:50 agis_ddmendpoints.agis.ALL.json
[2025-12-24 04:10:38] drwx------. 5 boincer umatlas      4096 Dec 24 02:50 pilot3
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas      6840 Dec 24 04:00 init_data.xml
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas 201170617 Dec 24 04:09 HITS.47905857._000232.pool.root.1
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas       529 Dec 24 04:09 boinc_task_state.xml
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas      1044 Dec 24 04:09 memory_monitor_summary.json
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas    367279 Dec 24 04:09 log.47905857._000232.job.log.tgz.1
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas        95 Dec 24 04:09 pilot_heartbeat.json
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas      7804 Dec 24 04:09 heartbeat.json
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas        27 Dec 24 04:10 wrapper_checkpoint.txt
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas      8192 Dec 24 04:10 boinc_mmap_file
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas      4894 Dec 24 04:10 pilotlog.txt
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas    705063 Dec 24 04:10 log.47905857._000232.job.log.1
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas       357 Dec 24 04:10 output.list
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas       620 Dec 24 04:10 runtime_log
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas   1095680 Dec 24 04:10 result.tar.gz
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas      9354 Dec 24 04:10 runtime_log.err
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas       654 Dec 24 04:10 ISJMDm5Bop8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmL3VKDmhRHdLm.diag
[2025-12-24 04:10:38] -rw-r--r--. 1 boincer umatlas     21916 Dec 24 04:10 stderr.txt
[2025-12-24 04:10:38] HITS file was successfully produced:
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas 201170617 Dec 24 04:09 shared/HITS.pool.root.1
[2025-12-24 04:10:38]  *** Contents of shared directory: ***
[2025-12-24 04:10:38] total 393988
[2025-12-24 04:10:38] -rw-r--r--. 2 boincer umatlas 200555871 Dec 24 02:50 ATLAS.root_0
[2025-12-24 04:10:38] -rw-r--r--. 2 boincer umatlas     15847 Dec 24 02:50 start_atlas.sh
[2025-12-24 04:10:38] -rw-r--r--. 2 boincer umatlas    592380 Dec 24 02:50 input.tar.gz
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas 201170617 Dec 24 04:09 HITS.pool.root.1
[2025-12-24 04:10:38] -rw-------. 1 boincer umatlas   1095680 Dec 24 04:10 result.tar.gz
04:10:39 (254382): run_atlas exited; CPU time 48185.064259
04:10:39 (254382): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN