Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:50:05 (246450): wrapper (7.7.26015): starting
02:50:05 (246450): wrapper: running run_atlas (--nthreads 11)
[2025-12-24 02:50:05] Arguments: --nthreads 11
[2025-12-24 02:50:05] Threads: 11
[2025-12-24 02:50:05] Checking for CVMFS
[2025-12-24 02:50:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-24 02:50:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-24 02:50:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-24 02:50:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-24 02:50:05] 2.13.3.0 9724 223 31800 154362 0 1 32057746 40960000 0 16776704 0 103 93.694 9387 5819 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-24 02:50:05] CVMFS is ok
[2025-12-24 02:50:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-24 02:50:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-24 02:50:05] Further information can be found at the LHC@home message board.
[2025-12-24 02:50:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-24 02:50:05] Checking for apptainer binary...
[2025-12-24 02:50:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-24 02:50:05] Running /usr/bin/apptainer --version
[2025-12-24 02:50:06] apptainer version 1.4.5-2.el9
[2025-12-24 02:50:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-24 02:50:07] c-210-33-3.aglt2.org
[2025-12-24 02:50:07] apptainer works
[2025-12-24 02:50:08] Set ATHENA_PROC_NUMBER=11
[2025-12-24 02:50:08] Set ATHENA_CORE_NUMBER=11
[2025-12-24 02:50:08] Starting ATLAS job with PandaID=6930761399
[2025-12-24 02:50:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-24 03:55:33]  *** The last 200 lines of the pilot log: ***
[2025-12-24 03:55:33]  protocol_id=None
[2025-12-24 03:55:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-12-24 03:55:33]  replicas=None
[2025-12-24 03:55:33]  scope=mc23_13p6TeV
[2025-12-24 03:55:33]  status=None
[2025-12-24 03:55:33]  status_code=0
[2025-12-24 03:55:33]  storage_token=
[2025-12-24 03:55:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6930761399/log.47886831._012463.job.log.tgz.1
[2025-12-24 03:55:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/f0/log.47886831._012463.job.log.tgz.1
[2025-12-24 03:55:33]  workdir=None
[2025-12-24 03:55:33] ]
[2025-12-24 03:55:33] 2025-12-24 08:54:54,446 | INFO     | transferring file log.47886831._012463.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6930761399/log.47886831._012463.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-12-24 03:55:33] 2025-12-24 08:54:54,446 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6930761399/log.47886831._012463.job.log.tgz.1 /tmp/boinchome/slots/0/log.47886831._012463.job
[2025-12-24 03:55:33] 2025-12-24 08:54:54,461 | INFO     | adding to output.list: log.47886831._012463.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/f0/log.47886831._012463.job.log.tg
[2025-12-24 03:55:33] 2025-12-24 08:54:54,462 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-12-24 03:55:33] 2025-12-24 08:54:54,462 | INFO     | summary of transferred files:
[2025-12-24 03:55:33] 2025-12-24 08:54:54,462 | INFO     |  -- lfn=log.47886831._012463.job.log.tgz.1, status_code=0, status=transferred
[2025-12-24 03:55:33] 2025-12-24 08:54:54,463 | INFO     | stage-out finished correctly
[2025-12-24 03:55:33] 2025-12-24 08:54:55,637 | INFO     | monitor loop #291: job 0:6930761399 is in state 'finished'
[2025-12-24 03:55:33] 2025-12-24 08:54:55,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-24 03:55:33] 2025-12-24 08:54:56,267 | INFO     | time since job start (3877s) is within the limit (174528.0s)
[2025-12-24 03:55:33] 2025-12-24 08:54:56,943 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-24 03:55:33] 2025-12-24 08:54:57,831 | INFO     | job 6930761399 has state=finished
[2025-12-24 03:55:33] 2025-12-24 08:54:57,831 | INFO     | preparing for final server update for job 6930761399 in state='finished'
[2025-12-24 03:55:33] 2025-12-24 08:54:57,832 | INFO     | this job has now completed (state=finished)
[2025-12-24 03:55:33] 2025-12-24 08:54:57,832 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-24 03:55:33] 2025-12-24 08:54:57,832 | INFO     | log transfer has been attempted: DONE
[2025-12-24 03:55:33] 2025-12-24 08:54:57,832 | INFO     | job 6930761399 has finished - writing final server update
[2025-12-24 03:55:33] 2025-12-24 08:54:57,832 | INFO     | total number of processed events: 400 (read)
[2025-12-24 03:55:33] 2025-12-24 08:54:57,833 | INFO     | executing command: lscpu
[2025-12-24 03:55:33] 2025-12-24 08:54:57,875 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-24 03:55:33] 2025-12-24 08:54:58,140 | INFO     | monitor loop #292: job 0:6930761399 is in state 'finished'
[2025-12-24 03:55:33] 2025-12-24 08:54:58,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-24 03:55:33] 2025-12-24 08:54:58,272 | INFO     | time since job start (3879s) is within the limit (174528.0s)
[2025-12-24 03:55:33] 2025-12-24 08:55:00,278 | INFO     | time since job start (3881s) is within the limit (174528.0s)
[2025-12-24 03:55:33] 2025-12-24 08:55:00,642 | INFO     | monitor loop #293: job 0:6930761399 is in state 'finished'
[2025-12-24 03:55:33] 2025-12-24 08:55:00,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-24 03:55:33] 2025-12-24 08:55:01,263 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-24 03:55:33] 2025-12-24 08:55:01,270 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3286.0041964285715
[2025-12-24 03:55:33] 2025-12-24 08:55:01,280 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6930761399/memory_monitor_summary.json (trf name=prmon)
[2025-12-24 03:55:33] 2025-12-24 08:55:01,280 | INFO     | extracted standard info from prmon json
[2025-12-24 03:55:33] 2025-12-24 08:55:01,280 | INFO     | extracted standard memory fields from prmon json
[2025-12-24 03:55:33] 2025-12-24 08:55:01,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-24 03:55:33] 2025-12-24 08:55:01,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-24 03:55:33] 2025-12-24 08:55:01,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-24 03:55:33] 2025-12-24 08:55:01,282 | INFO     | fitting pss+swap vs Time
[2025-12-24 03:55:33] 2025-12-24 08:55:01,283 | INFO     | sum of square deviations: 57407588.0
[2025-12-24 03:55:33] 2025-12-24 08:55:01,283 | INFO     | sum of deviations: -913482015.0
[2025-12-24 03:55:33] 2025-12-24 08:55:01,283 | INFO     | mean x: 1766564653.0
[2025-12-24 03:55:33] 2025-12-24 08:55:01,283 | INFO     | mean y: 2650780.298245614
[2025-12-24 03:55:33] 2025-12-24 08:55:01,283 | INFO     | intersect: 28112611415.64519
[2025-12-24 03:55:33] 2025-12-24 08:55:01,283 | INFO     | chi2: 0.003915952696239313
[2025-12-24 03:55:33] 2025-12-24 08:55:01,284 | INFO     | current memory leak: -15.91 B/s (using 57 data points, chi2=0.00)
[2025-12-24 03:55:33] 2025-12-24 08:55:01,284 | INFO     | could have reported an average CPU frequency of 3241 MHz (6 samples)
[2025-12-24 03:55:33] 2025-12-24 08:55:01,284 | INFO     | ..............................
[2025-12-24 03:55:33] 2025-12-24 08:55:01,284 | INFO     | . Timing measurements:
[2025-12-24 03:55:33] 2025-12-24 08:55:01,284 | INFO     | . get job = 0 s
[2025-12-24 03:55:33] 2025-12-24 08:55:01,284 | INFO     | . initial setup = 2 s
[2025-12-24 03:55:33] 2025-12-24 08:55:01,284 | INFO     | . payload setup = 4 s
[2025-12-24 03:55:33] 2025-12-24 08:55:01,284 | INFO     | . stage-in = 0 s
[2025-12-24 03:55:33] 2025-12-24 08:55:01,284 | INFO     | . payload execution = 3853 s
[2025-12-24 03:55:33] 2025-12-24 08:55:01,284 | INFO     | . stage-out = 0 s
[2025-12-24 03:55:33] 2025-12-24 08:55:01,285 | INFO     | . log creation = 0 s
[2025-12-24 03:55:33] 2025-12-24 08:55:01,285 | INFO     | ..............................
[2025-12-24 03:55:33] 2025-12-24 08:55:01,369 | INFO     | 
[2025-12-24 03:55:33] 2025-12-24 08:55:01,369 | INFO     | job summary report
[2025-12-24 03:55:33] 2025-12-24 08:55:01,369 | INFO     | --------------------------------------------------
[2025-12-24 03:55:33] 2025-12-24 08:55:01,369 | INFO     | PanDA job id: 6930761399
[2025-12-24 03:55:33] 2025-12-24 08:55:01,369 | INFO     | task id: 47886831
[2025-12-24 03:55:33] 2025-12-24 08:55:01,369 | INFO     | errors: (none)
[2025-12-24 03:55:33] 2025-12-24 08:55:01,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-24 03:55:33] 2025-12-24 08:55:01,369 | INFO     | pilot state: finished 
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | transexitcode: 0
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | exeerrorcode: 0
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | exeerrordiag: 
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | exitcode: 0
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | exitmsg: OK
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | cpuconsumptiontime: 38777 s
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | nevents: 400
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | neventsw: 0
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | pid: 273056
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | pgrp: 273056
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | corecount: 11
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | event service: False
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | sizes: {0: 2283165, 1: 2284021, 3: 2284283, 11: 2284311, 3862: 2310053, 3863: 2319051, 3865: 2319235, 3870: 2319429}
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | --------------------------------------------------
[2025-12-24 03:55:33] 2025-12-24 08:55:01,370 | INFO     | 
[2025-12-24 03:55:33] 2025-12-24 08:55:01,371 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-24 03:55:33] 2025-12-24 08:55:01,383 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-24 03:55:33] 2025-12-24 08:55:01,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,385 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-24 03:55:33] 2025-12-24 08:55:01,385 | INFO     | job 6930761399 has completed (purged errors)
[2025-12-24 03:55:33] 2025-12-24 08:55:01,385 | INFO     | overall cleanup function is called
[2025-12-24 03:55:33] 2025-12-24 08:55:02,393 | INFO     | --- collectZombieJob: --- 10, [273056]
[2025-12-24 03:55:33] 2025-12-24 08:55:02,393 | INFO     | zombie collector waiting for pid 273056
[2025-12-24 03:55:33] 2025-12-24 08:55:02,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-24 03:55:33] 2025-12-24 08:55:02,393 | INFO     | collected zombie processes
[2025-12-24 03:55:33] 2025-12-24 08:55:02,393 | INFO     | will attempt to kill all subprocesses of pid=273056
[2025-12-24 03:55:33] 2025-12-24 08:55:02,588 | INFO     | process IDs to be killed: [273056] (in reverse order)
[2025-12-24 03:55:33] 2025-12-24 08:55:02,651 | WARNING  | found no corresponding commands to process id(s)
[2025-12-24 03:55:33] 2025-12-24 08:55:02,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-24 03:55:33] 2025-12-24 08:55:02,657 | INFO     | did not find any defunct processes belonging to 273056
[2025-12-24 03:55:33] 2025-12-24 08:55:02,663 | INFO     | did not find any defunct processes belonging to 273056
[2025-12-24 03:55:33] 2025-12-24 08:55:02,663 | INFO     | ready for new job
[2025-12-24 03:55:33] 2025-12-24 08:55:02,664 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-24 03:55:33] 2025-12-24 08:55:02,665 | INFO     | ***************************************
[2025-12-24 03:55:33] 2025-12-24 08:55:02,665 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-24 03:55:33] 2025-12-24 08:55:02,665 | INFO     | ***************************************
[2025-12-24 03:55:33] 2025-12-24 08:55:02,665 | INFO     | 
[2025-12-24 03:55:33] 2025-12-24 08:55:02,668 | INFO     | architecture information:
[2025-12-24 03:55:33] 2025-12-24 08:55:02,669 | INFO     | executing command: cat /etc/os-release
[2025-12-24 03:55:33] 2025-12-24 08:55:02,681 | INFO     | cat /etc/os-release:
[2025-12-24 03:55:33] NAME="CentOS Linux"
[2025-12-24 03:55:33] VERSION="7 (Core)"
[2025-12-24 03:55:33] ID="centos"
[2025-12-24 03:55:33] ID_LIKE="rhel fedora"
[2025-12-24 03:55:33] VERSION_ID="7"
[2025-12-24 03:55:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-24 03:55:33] ANSI_COLOR="0;31"
[2025-12-24 03:55:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-24 03:55:33] HOME_URL="https://www.centos.org/"
[2025-12-24 03:55:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-24 03:55:33] 
[2025-12-24 03:55:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-24 03:55:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-24 03:55:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-24 03:55:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-24 03:55:33] 
[2025-12-24 03:55:33] 2025-12-24 08:55:02,682 | INFO     | ***************************************
[2025-12-24 03:55:33] 2025-12-24 08:55:03,185 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-24 03:55:33] 2025-12-24 08:55:03,199 | INFO     | sufficient remaining disk space (73339502592 B)
[2025-12-24 03:55:33] 2025-12-24 08:55:03,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-24 03:55:33] 2025-12-24 08:55:03,199 | INFO     | current server update state: UPDATING_FINAL
[2025-12-24 03:55:33] 2025-12-24 08:55:03,199 | INFO     | update_server=False
[2025-12-24 03:55:33] 2025-12-24 08:55:03,199 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-24 03:55:33] 2025-12-24 08:55:03,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-24 03:55:33] 2025-12-24 08:55:03,200 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-24 03:55:33] 2025-12-24 08:55:03,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-24 03:55:33] 2025-12-24 08:55:03,385 | INFO     | all payload control threads have been joined
[2025-12-24 03:55:33] 2025-12-24 08:55:04,087 | INFO     | all data control threads have been joined
[2025-12-24 03:55:33] 2025-12-24 08:55:04,151 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-24 03:55:33] 2025-12-24 08:55:04,151 | INFO     | aborting loop
[2025-12-24 03:55:33] 2025-12-24 08:55:04,202 | INFO     | [job] retrieve thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:04,206 | INFO     | [job] queue monitor thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:04,391 | INFO     | [payload] control thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:04,422 | INFO     | [payload] validate_post thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:04,587 | INFO     | [data] copytool_in thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:04,598 | INFO     | all job control threads have been joined
[2025-12-24 03:55:33] 2025-12-24 08:55:04,906 | INFO     | [job] validate thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:05,093 | INFO     | [data] control thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:05,095 | INFO     | [payload] execute_payloads thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:05,156 | INFO     | [job] job monitor thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:05,206 | INFO     | [data] copytool_out thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:05,311 | INFO     | [payload] validate_pre thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:05,326 | INFO     | [job] create_data_payload thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:05,526 | INFO     | [payload] failed_post thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:05,603 | INFO     | [job] control thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:07,206 | INFO     | [data] queue_monitor thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:13,643 | INFO     | job.realtimelogging is not enabled
[2025-12-24 03:55:33] 2025-12-24 08:55:14,647 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-24 03:55:33] 2025-12-24 08:55:24,988 | INFO     | [monitor] cgroup control has ended
[2025-12-24 03:55:33] 2025-12-24 08:55:26,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912121734976)>', '<ExcThread(monitor, started 139911772497664)>']
[2025-12-24 03:55:33] 2025-12-24 08:55:32,000 | INFO     | all workflow threads have been joined
[2025-12-24 03:55:33] 2025-12-24 08:55:32,001 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-24 03:55:33] 2025-12-24 08:55:32,001 | INFO     | traces error code: 0
[2025-12-24 03:55:33] 2025-12-24 08:55:32,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-24 03:55:33] 2025-12-24 08:55:33,585 | INFO     | PID=251955 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-24 03:55:33] 2025-12-24 08:55:33,585 | INFO     | .. there are 5 such processes running
[2025-12-24 03:55:33] 2025-12-24 08:55:33,586 | INFO     | found 0 job(s) in 20 queues
[2025-12-24 03:55:33] 2025-12-24 08:55:33,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-24 03:55:33] 2025-12-24 08:55:33,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-24 03:55:33] 2025-12-24 08:55:33,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-24 03:55:33] 2025-12-24 08:55:33,586 | INFO     | [monitor] control thread has ended
[2025-12-24 03:55:33] 2025-12-24 08:55:33,710 [wrapper] ==== pilot stdout END ====
[2025-12-24 03:55:33] 2025-12-24 08:55:33,713 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-24 03:55:33] 2025-12-24 08:55:33,714 [wrapper] pilotpid: 251955
[2025-12-24 03:55:33] 2025-12-24 08:55:33,716 [wrapper] Pilot exit status: 0
[2025-12-24 03:55:33] 2025-12-24 08:55:33,750 [wrapper] pandaids: 6930761399
[2025-12-24 03:55:33] 2025-12-24 08:55:33,780 [wrapper] cleanup supervisor_pilot  416100 251956
[2025-12-24 03:55:33] 2025-12-24 08:55:33,782 [wrapper] Test setup, not cleaning
[2025-12-24 03:55:33] 2025-12-24 08:55:33,784 [wrapper] apfmon messages muted
[2025-12-24 03:55:33] 2025-12-24 08:55:33,786 [wrapper] ==== wrapper stdout END ====
[2025-12-24 03:55:33] 2025-12-24 08:55:33,788 [wrapper] ==== wrapper stderr END ====
[2025-12-24 03:55:33]  *** Error codes and diagnostics ***
[2025-12-24 03:55:33]     "exeErrorCode": 0,
[2025-12-24 03:55:33]     "exeErrorDiag": "",
[2025-12-24 03:55:33]     "pilotErrorCode": 0,
[2025-12-24 03:55:33]     "pilotErrorDiag": "",
[2025-12-24 03:55:33]  *** Listing of results directory ***
[2025-12-24 03:55:33] total 338512
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas    579449 Dec 16 01:04 pilot3.tar.gz
[2025-12-24 03:55:33] -rwx------. 1 boincer umatlas     36322 Dec 16 01:08 runpilot2-wrapper.sh
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas      5112 Dec 16 01:11 queuedata.json
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas       100 Dec 24 02:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-24 03:55:33] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 24 02:50 run_atlas
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas       105 Dec 24 02:50 job.xml
[2025-12-24 03:55:33] -rw-r--r--. 2 boincer umatlas 192379980 Dec 24 02:50 EVNT.47886829._000511.pool.root.1
[2025-12-24 03:55:33] -rw-r--r--. 2 boincer umatlas     15847 Dec 24 02:50 start_atlas.sh
[2025-12-24 03:55:33] drwxrwx--x. 2 boincer umatlas      4096 Dec 24 02:50 shared
[2025-12-24 03:55:33] -rw-r--r--. 2 boincer umatlas    592413 Dec 24 02:50 input.tar.gz
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas         0 Dec 24 02:50 boinc_lockfile
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas      2539 Dec 24 02:50 pandaJob.out
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas        57 Dec 24 02:50 setup.sh.local
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas    987357 Dec 24 02:50 agis_schedconf.cvmfs.json
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas   1516240 Dec 24 02:50 agis_ddmendpoints.agis.ALL.json
[2025-12-24 03:55:33] drwx------. 5 boincer umatlas      4096 Dec 24 02:50 pilot3
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas      6840 Dec 24 03:48 init_data.xml
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas 148432844 Dec 24 03:54 HITS.47886831._012463.pool.root.1
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas       529 Dec 24 03:54 boinc_task_state.xml
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas      1036 Dec 24 03:54 memory_monitor_summary.json
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas    371370 Dec 24 03:54 log.47886831._012463.job.log.tgz.1
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas      7829 Dec 24 03:55 heartbeat.json
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas      8192 Dec 24 03:55 boinc_mmap_file
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas        27 Dec 24 03:55 wrapper_checkpoint.txt
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas       821 Dec 24 03:55 pilotlog.txt
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas        95 Dec 24 03:55 pilot_heartbeat.json
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas    586174 Dec 24 03:55 log.47886831._012463.job.log.1
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas       357 Dec 24 03:55 output.list
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas       620 Dec 24 03:55 runtime_log
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas    972800 Dec 24 03:55 result.tar.gz
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas      9354 Dec 24 03:55 runtime_log.err
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas       655 Dec 24 03:55 dITLDmRPdp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmfZKDm9xc5On.diag
[2025-12-24 03:55:33] -rw-r--r--. 1 boincer umatlas     21817 Dec 24 03:55 stderr.txt
[2025-12-24 03:55:33] HITS file was successfully produced:
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas 148432844 Dec 24 03:54 shared/HITS.pool.root.1
[2025-12-24 03:55:33]  *** Contents of shared directory: ***
[2025-12-24 03:55:33] total 334380
[2025-12-24 03:55:33] -rw-r--r--. 2 boincer umatlas 192379980 Dec 24 02:50 ATLAS.root_0
[2025-12-24 03:55:33] -rw-r--r--. 2 boincer umatlas     15847 Dec 24 02:50 start_atlas.sh
[2025-12-24 03:55:33] -rw-r--r--. 2 boincer umatlas    592413 Dec 24 02:50 input.tar.gz
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas 148432844 Dec 24 03:54 HITS.pool.root.1
[2025-12-24 03:55:33] -rw-------. 1 boincer umatlas    972800 Dec 24 03:55 result.tar.gz
03:55:34 (246450): run_atlas exited; CPU time 38852.444183
03:55:34 (246450): called boinc_finish(0)

</stderr_txt>
]]>

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