Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:12:39 (6204): wrapper (7.7.26015): starting
19:12:39 (6204): wrapper: running run_atlas (--nthreads 12)
[2025-12-23 19:12:39] Arguments: --nthreads 12
[2025-12-23 19:12:39] Threads: 12
[2025-12-23 19:12:39] Checking for CVMFS
[2025-12-23 19:12:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-23 19:12:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-23 19:12:40] Running cvmfs_config stat atlas.cern.ch
[2025-12-23 19:12:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-23 19:12:40] 2.11.2.0 2916 327220 99976 154350 0 1 13213000 20275200 1 130560 1 145227215 99.954 19922436 15978 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-23 19:12:40] CVMFS is ok
[2025-12-23 19:12:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-23 19:12:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-23 19:12:40] Further information can be found at the LHC@home message board.
[2025-12-23 19:12:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-23 19:12:40] Checking for apptainer binary...
[2025-12-23 19:12:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-23 19:12:40] Running /usr/bin/apptainer --version
[2025-12-23 19:12:40] apptainer version 1.3.2-1.el7
[2025-12-23 19:12:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-23 19:12:42] c-205-23.aglt2.org
[2025-12-23 19:12:42] apptainer works
[2025-12-23 19:12:42] Set ATHENA_PROC_NUMBER=12
[2025-12-23 19:12:42] Set ATHENA_CORE_NUMBER=12
[2025-12-23 19:12:42] Starting ATLAS job with PandaID=6929805619
[2025-12-23 19:12:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-23 20:29:11]  *** The last 200 lines of the pilot log: ***
[2025-12-23 20:29:11] 2025-12-24 01:28:20,598 | INFO     |  -- lfn=log.47886933._005184.job.log.tgz.1, status_code=0, status=transferred
[2025-12-23 20:29:11] 2025-12-24 01:28:20,598 | INFO     | stage-out finished correctly
[2025-12-23 20:29:11] 2025-12-24 01:28:20,681 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-12-23 20:29:11] 2025-12-24 01:28:21,097 | WARNING  | process 16657 can no longer be monitored (due to stat problems) - aborting
[2025-12-23 20:29:11] 2025-12-24 01:28:21,098 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929805619/memory_monitor_summary.json (trf name=prmon)
[2025-12-23 20:29:11] 2025-12-24 01:28:21,098 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929805619/memory_monitor_summary.json (trf name=prmon)
[2025-12-23 20:29:11] 2025-12-24 01:28:21,099 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-12-23 20:29:11] 2025-12-24 01:28:21,099 | WARNING  | maxPSS not found in memory monitor output
[2025-12-23 20:29:11] 2025-12-24 01:28:21,099 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3717194 B
[2025-12-23 20:29:11] 2025-12-24 01:28:21,099 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15339 B
[2025-12-23 20:29:11] 2025-12-24 01:28:21,100 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-23 20:29:11] 2025-12-24 01:28:21,117 | INFO     | sufficient remaining disk space (29448208384 B)
[2025-12-23 20:29:11] 2025-12-24 01:28:21,117 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-23 20:29:11] 2025-12-24 01:28:21,119 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6929805619: 4014884 B (within 2768240640 B limit)
[2025-12-23 20:29:11] 2025-12-24 01:28:21,119 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6929805619/HITS.47886933._005184.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-23 20:29:11] 2025-12-24 01:28:21,119 | INFO     | total size of present files: 0 B (workdir size: 4014884 B)
[2025-12-23 20:29:11] 2025-12-24 01:28:21,119 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6929805619/HITS.47886933._005184.pool.root.1 since it does not exist
[2025-12-23 20:29:11] 2025-12-24 01:28:21,209 | INFO     | number of running child processes to parent process 16657: 1
[2025-12-23 20:29:11] 2025-12-24 01:28:21,209 | INFO     | maximum number of monitored processes: 6
[2025-12-23 20:29:11] 2025-12-24 01:28:21,898 | INFO     | job 6929805619 has state=finished
[2025-12-23 20:29:11] 2025-12-24 01:28:21,898 | INFO     | preparing for final server update for job 6929805619 in state='finished'
[2025-12-23 20:29:11] 2025-12-24 01:28:21,898 | INFO     | this job has now completed (state=finished)
[2025-12-23 20:29:11] 2025-12-24 01:28:21,899 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-23 20:29:11] 2025-12-24 01:28:21,899 | INFO     | log transfer has been attempted: DONE
[2025-12-23 20:29:11] 2025-12-24 01:28:21,899 | INFO     | job 6929805619 has finished - writing final server update
[2025-12-23 20:29:11] 2025-12-24 01:28:21,899 | INFO     | total number of processed events: 400 (read)
[2025-12-23 20:29:11] 2025-12-24 01:28:21,900 | INFO     | executing command: lscpu
[2025-12-23 20:29:11] 2025-12-24 01:28:21,911 | INFO     | time since job start (4522s) is within the limit (174528.0s)
[2025-12-23 20:29:11] 2025-12-24 01:28:21,926 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-23 20:29:11] 2025-12-24 01:28:23,713 | INFO     | monitor loop #336: job 0:6929805619 is in state 'finished'
[2025-12-23 20:29:11] 2025-12-24 01:28:23,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-23 20:29:11] 2025-12-24 01:28:23,916 | INFO     | time since job start (4524s) is within the limit (174528.0s)
[2025-12-23 20:29:11] 2025-12-24 01:28:25,038 | INFO     | PID=10251 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-23 20:29:11] 2025-12-24 01:28:26,039 | INFO     | time since job start (4527s) is within the limit (174528.0s)
[2025-12-23 20:29:11] 2025-12-24 01:28:26,216 | INFO     | monitor loop #337: job 0:6929805619 is in state 'finished'
[2025-12-23 20:29:11] 2025-12-24 01:28:26,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-23 20:29:11] 2025-12-24 01:28:26,830 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-23 20:29:11] 2025-12-24 01:28:26,833 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-12-23 20:29:11] 2025-12-24 01:28:26,836 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929805619/memory_monitor_summary.json (trf name=prmon)
[2025-12-23 20:29:11] 2025-12-24 01:28:26,837 | INFO     | extracted standard info from prmon json
[2025-12-23 20:29:11] 2025-12-24 01:28:26,837 | INFO     | extracted standard memory fields from prmon json
[2025-12-23 20:29:11] 2025-12-24 01:28:26,837 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-23 20:29:11] 2025-12-24 01:28:26,838 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-23 20:29:11] 2025-12-24 01:28:26,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-23 20:29:11] 2025-12-24 01:28:26,840 | INFO     | fitting pss+swap vs Time
[2025-12-23 20:29:11] 2025-12-24 01:28:26,840 | INFO     | sum of square deviations: 93240818.0
[2025-12-23 20:29:11] 2025-12-24 01:28:26,841 | INFO     | sum of deviations: 480814444.0000001
[2025-12-23 20:29:11] 2025-12-24 01:28:26,841 | INFO     | mean x: 1766537526.0
[2025-12-23 20:29:11] 2025-12-24 01:28:26,841 | INFO     | mean y: 2682444.76119403
[2025-12-23 20:29:11] 2025-12-24 01:28:26,841 | INFO     | intersect: -9106812480.184935
[2025-12-23 20:29:11] 2025-12-24 01:28:26,841 | INFO     | chi2: 0.004177235212276867
[2025-12-23 20:29:11] 2025-12-24 01:28:26,841 | INFO     | current memory leak: 5.16 B/s (using 67 data points, chi2=0.00)
[2025-12-23 20:29:11] 2025-12-24 01:28:26,842 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-12-23 20:29:11] 2025-12-24 01:28:26,842 | INFO     | ..............................
[2025-12-23 20:29:11] 2025-12-24 01:28:26,842 | INFO     | . Timing measurements:
[2025-12-23 20:29:11] 2025-12-24 01:28:26,842 | INFO     | . get job = 0 s
[2025-12-23 20:29:11] 2025-12-24 01:28:26,842 | INFO     | . initial setup = 2 s
[2025-12-23 20:29:11] 2025-12-24 01:28:26,842 | INFO     | . payload setup = 7 s
[2025-12-23 20:29:11] 2025-12-24 01:28:26,843 | INFO     | . stage-in = 0 s
[2025-12-23 20:29:11] 2025-12-24 01:28:26,843 | INFO     | . payload execution = 4492 s
[2025-12-23 20:29:11] 2025-12-24 01:28:26,843 | INFO     | . stage-out = 0 s
[2025-12-23 20:29:11] 2025-12-24 01:28:26,843 | INFO     | . log creation = 0 s
[2025-12-23 20:29:11] 2025-12-24 01:28:26,843 | INFO     | ..............................
[2025-12-23 20:29:11] 2025-12-24 01:28:26,922 | INFO     | 
[2025-12-23 20:29:11] 2025-12-24 01:28:26,923 | INFO     | job summary report
[2025-12-23 20:29:11] 2025-12-24 01:28:26,923 | INFO     | --------------------------------------------------
[2025-12-23 20:29:11] 2025-12-24 01:28:26,923 | INFO     | PanDA job id: 6929805619
[2025-12-23 20:29:11] 2025-12-24 01:28:26,923 | INFO     | task id: 47886933
[2025-12-23 20:29:11] 2025-12-24 01:28:26,923 | INFO     | errors: (none)
[2025-12-23 20:29:11] 2025-12-24 01:28:26,924 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-23 20:29:11] 2025-12-24 01:28:26,924 | INFO     | pilot state: finished 
[2025-12-23 20:29:11] 2025-12-24 01:28:26,924 | INFO     | transexitcode: 0
[2025-12-23 20:29:11] 2025-12-24 01:28:26,924 | INFO     | exeerrorcode: 0
[2025-12-23 20:29:11] 2025-12-24 01:28:26,924 | INFO     | exeerrordiag: 
[2025-12-23 20:29:11] 2025-12-24 01:28:26,924 | INFO     | exitcode: 0
[2025-12-23 20:29:11] 2025-12-24 01:28:26,925 | INFO     | exitmsg: OK
[2025-12-23 20:29:11] 2025-12-24 01:28:26,925 | INFO     | cpuconsumptiontime: 48083 s
[2025-12-23 20:29:11] 2025-12-24 01:28:26,925 | INFO     | nevents: 400
[2025-12-23 20:29:11] 2025-12-24 01:28:26,925 | INFO     | neventsw: 0
[2025-12-23 20:29:11] 2025-12-24 01:28:26,925 | INFO     | pid: 16657
[2025-12-23 20:29:11] 2025-12-24 01:28:26,925 | INFO     | pgrp: 16657
[2025-12-23 20:29:11] 2025-12-24 01:28:26,926 | INFO     | corecount: 12
[2025-12-23 20:29:11] 2025-12-24 01:28:26,926 | INFO     | event service: False
[2025-12-23 20:29:11] 2025-12-24 01:28:26,926 | INFO     | sizes: {0: 2283730, 1: 2283985, 6: 2284247, 12: 2284275, 4504: 2310338, 4506: 2319520, 4512: 2319686}
[2025-12-23 20:29:11] 2025-12-24 01:28:26,926 | INFO     | --------------------------------------------------
[2025-12-23 20:29:11] 2025-12-24 01:28:26,926 | INFO     | 
[2025-12-23 20:29:11] 2025-12-24 01:28:26,926 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-23 20:29:11] 2025-12-24 01:28:26,951 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,951 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,951 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,952 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,954 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-23 20:29:11] 2025-12-24 01:28:26,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,954 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-23 20:29:11] 2025-12-24 01:28:26,954 | INFO     | job 6929805619 has completed (purged errors)
[2025-12-23 20:29:11] 2025-12-24 01:28:26,954 | INFO     | overall cleanup function is called
[2025-12-23 20:29:11] 2025-12-24 01:28:27,961 | INFO     | --- collectZombieJob: --- 10, [16657]
[2025-12-23 20:29:11] 2025-12-24 01:28:27,961 | INFO     | zombie collector waiting for pid 16657
[2025-12-23 20:29:11] 2025-12-24 01:28:27,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-23 20:29:11] 2025-12-24 01:28:27,961 | INFO     | collected zombie processes
[2025-12-23 20:29:11] 2025-12-24 01:28:27,961 | INFO     | will attempt to kill all subprocesses of pid=16657
[2025-12-23 20:29:11] 2025-12-24 01:28:28,054 | INFO     | process IDs to be killed: [16657] (in reverse order)
[2025-12-23 20:29:11] 2025-12-24 01:28:28,108 | WARNING  | found no corresponding commands to process id(s)
[2025-12-23 20:29:11] 2025-12-24 01:28:28,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-23 20:29:11] 2025-12-24 01:28:28,111 | INFO     | did not find any defunct processes belonging to 16657
[2025-12-23 20:29:11] 2025-12-24 01:28:28,113 | INFO     | did not find any defunct processes belonging to 16657
[2025-12-23 20:29:11] 2025-12-24 01:28:28,114 | INFO     | ready for new job
[2025-12-23 20:29:11] 2025-12-24 01:28:28,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-23 20:29:11] 2025-12-24 01:28:28,115 | INFO     | ***************************************
[2025-12-23 20:29:11] 2025-12-24 01:28:28,115 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-23 20:29:11] 2025-12-24 01:28:28,115 | INFO     | ***************************************
[2025-12-23 20:29:11] 2025-12-24 01:28:28,115 | INFO     | 
[2025-12-23 20:29:11] 2025-12-24 01:28:28,116 | INFO     | architecture information:
[2025-12-23 20:29:11] 2025-12-24 01:28:28,116 | INFO     | executing command: cat /etc/os-release
[2025-12-23 20:29:11] 2025-12-24 01:28:28,131 | INFO     | cat /etc/os-release:
[2025-12-23 20:29:11] NAME="CentOS Linux"
[2025-12-23 20:29:11] VERSION="7 (Core)"
[2025-12-23 20:29:11] ID="centos"
[2025-12-23 20:29:11] ID_LIKE="rhel fedora"
[2025-12-23 20:29:11] VERSION_ID="7"
[2025-12-23 20:29:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-23 20:29:11] ANSI_COLOR="0;31"
[2025-12-23 20:29:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-23 20:29:11] HOME_URL="https://www.centos.org/"
[2025-12-23 20:29:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-23 20:29:11] 
[2025-12-23 20:29:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-23 20:29:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-23 20:29:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-23 20:29:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-23 20:29:11] 
[2025-12-23 20:29:11] 2025-12-24 01:28:28,131 | INFO     | ***************************************
[2025-12-23 20:29:11] 2025-12-24 01:28:28,634 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-23 20:29:11] 2025-12-24 01:28:28,652 | INFO     | sufficient remaining disk space (29452402688 B)
[2025-12-23 20:29:11] 2025-12-24 01:28:28,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-23 20:29:11] 2025-12-24 01:28:28,653 | INFO     | current server update state: UPDATING_FINAL
[2025-12-23 20:29:11] 2025-12-24 01:28:28,653 | INFO     | update_server=False
[2025-12-23 20:29:11] 2025-12-24 01:28:28,653 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-23 20:29:11] 2025-12-24 01:28:28,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-23 20:29:11] 2025-12-24 01:28:28,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-23 20:29:11] 2025-12-24 01:28:28,720 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-23 20:29:11] 2025-12-24 01:28:28,720 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-23 20:29:11] 2025-12-24 01:28:28,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-23 20:29:11] 2025-12-24 01:28:28,720 | INFO     | will abort loop
[2025-12-23 20:29:11] 2025-12-24 01:28:29,312 | INFO     | all data control threads have been joined
[2025-12-23 20:29:11] 2025-12-24 01:28:29,570 | INFO     | all job control threads have been joined
[2025-12-23 20:29:11] 2025-12-24 01:28:29,653 | INFO     | all payload control threads have been joined
[2025-12-23 20:29:11] 2025-12-24 01:28:29,655 | INFO     | [job] queue monitor thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:29,658 | INFO     | [job] retrieve thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:29,726 | INFO     | [job] job monitor thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:29,924 | INFO     | [payload] validate_post thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:29,984 | INFO     | [data] copytool_in thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:30,164 | INFO     | [payload] execute_payloads thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:30,318 | INFO     | [data] control thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:30,573 | INFO     | [job] control thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:30,658 | INFO     | [payload] control thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:30,698 | INFO     | [data] copytool_out thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:30,767 | INFO     | [job] validate thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:30,773 | INFO     | [job] create_data_payload thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:30,951 | INFO     | [payload] failed_post thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:31,116 | INFO     | [payload] validate_pre thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:31,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-23 20:29:11] 2025-12-24 01:28:35,272 | INFO     | [data] queue_monitor thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:39,361 | INFO     | job.realtimelogging is not enabled
[2025-12-23 20:29:11] 2025-12-24 01:28:40,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-23 20:29:11] 2025-12-24 01:28:59,246 | INFO     | PID=10251 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-23 20:29:11] 2025-12-24 01:28:59,253 | INFO     | found 0 job(s) in 20 queues
[2025-12-23 20:29:11] 2025-12-24 01:28:59,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-23 20:29:11] 2025-12-24 01:28:59,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-23 20:29:11] 2025-12-24 01:29:05,906 | INFO     | [monitor] cgroup control has ended
[2025-12-23 20:29:11] 2025-12-24 01:29:06,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139905494026048)>', '<ExcThread(monitor, started 139904885430016)>']
[2025-12-23 20:29:11] 2025-12-24 01:29:06,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-23 20:29:11] 2025-12-24 01:29:06,286 | INFO     | [monitor] control thread has ended
[2025-12-23 20:29:11] 2025-12-24 01:29:11,066 | INFO     | all workflow threads have been joined
[2025-12-23 20:29:11] 2025-12-24 01:29:11,066 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-23 20:29:11] 2025-12-24 01:29:11,073 | INFO     | traces error code: 0
[2025-12-23 20:29:11] 2025-12-24 01:29:11,073 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-23 20:29:11] 2025-12-24 01:29:11,181 [wrapper] ==== pilot stdout END ====
[2025-12-23 20:29:11] 2025-12-24 01:29:11,186 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-23 20:29:11] 2025-12-24 01:29:11,190 [wrapper] pilotpid: 10251
[2025-12-23 20:29:11] 2025-12-24 01:29:11,193 [wrapper] Pilot exit status: 0
[2025-12-23 20:29:11] 2025-12-24 01:29:11,208 [wrapper] pandaids: 6929805619
[2025-12-23 20:29:11] 2025-12-24 01:29:11,254 [wrapper] cleanup supervisor_pilot 13260 10252
[2025-12-23 20:29:11] 2025-12-24 01:29:11,258 [wrapper] Test setup, not cleaning
[2025-12-23 20:29:11] 2025-12-24 01:29:11,262 [wrapper] apfmon messages muted
[2025-12-23 20:29:11] 2025-12-24 01:29:11,266 [wrapper] ==== wrapper stdout END ====
[2025-12-23 20:29:11] 2025-12-24 01:29:11,270 [wrapper] ==== wrapper stderr END ====
[2025-12-23 20:29:11]  *** Error codes and diagnostics ***
[2025-12-23 20:29:11]     "exeErrorCode": 0,
[2025-12-23 20:29:11]     "exeErrorDiag": "",
[2025-12-23 20:29:11]     "pilotErrorCode": 0,
[2025-12-23 20:29:11]     "pilotErrorDiag": "",
[2025-12-23 20:29:11]  *** Listing of results directory ***
[2025-12-23 20:29:11] total 334264
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas      5112 Dec 15 08:27 queuedata.json
[2025-12-23 20:29:11] -rwx------ 1 boincer umatlas     36322 Dec 15 08:27 runpilot2-wrapper.sh
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas    579449 Dec 15 08:27 pilot3.tar.gz
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas       100 Dec 23 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-23 20:29:11] -rwxr-xr-x 1 boincer umatlas      7986 Dec 23 19:12 run_atlas
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas       105 Dec 23 19:12 job.xml
[2025-12-23 20:29:11] -rw-r--r-- 2 boincer umatlas 192603676 Dec 23 19:12 EVNT.47886929._000095.pool.root.1
[2025-12-23 20:29:11] -rw-r--r-- 2 boincer umatlas     15847 Dec 23 19:12 start_atlas.sh
[2025-12-23 20:29:11] drwxrwx--x 2 boincer umatlas      4096 Dec 23 19:12 shared
[2025-12-23 20:29:11] -rw-r--r-- 2 boincer umatlas    592382 Dec 23 19:12 input.tar.gz
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas         0 Dec 23 19:12 boinc_lockfile
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas      2509 Dec 23 19:12 pandaJob.out
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas        57 Dec 23 19:12 setup.sh.local
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas    987055 Dec 23 19:12 agis_schedconf.cvmfs.json
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas   1516240 Dec 23 19:12 agis_ddmendpoints.agis.ALL.json
[2025-12-23 20:29:11] drwx------ 5 boincer umatlas      4096 Dec 23 19:12 pilot3
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas      5953 Dec 23 20:21 init_data.xml
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas 143725430 Dec 23 20:27 HITS.47886933._005184.pool.root.1
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas       529 Dec 23 20:28 boinc_task_state.xml
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas      1046 Dec 23 20:28 memory_monitor_summary.json
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas    368020 Dec 23 20:28 log.47886933._005184.job.log.tgz.1
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas      7834 Dec 23 20:28 heartbeat.json
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas        27 Dec 23 20:28 wrapper_checkpoint.txt
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas      8192 Dec 23 20:28 boinc_mmap_file
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas        95 Dec 23 20:28 pilot_heartbeat.json
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas      5004 Dec 23 20:29 pilotlog.txt
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas    656482 Dec 23 20:29 log.47886933._005184.job.log.1
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas       357 Dec 23 20:29 output.list
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas       620 Dec 23 20:29 runtime_log
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas   1044480 Dec 23 20:29 result.tar.gz
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas      9344 Dec 23 20:29 runtime_log.err
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas       660 Dec 23 20:29 NOfLDmWmNp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfxXKDm9inJln.diag
[2025-12-23 20:29:11] -rw-r--r-- 1 boincer umatlas     22541 Dec 23 20:29 stderr.txt
[2025-12-23 20:29:11] HITS file was successfully produced:
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas 143725430 Dec 23 20:27 shared/HITS.pool.root.1
[2025-12-23 20:29:11]  *** Contents of shared directory: ***
[2025-12-23 20:29:11] total 330068
[2025-12-23 20:29:11] -rw-r--r-- 2 boincer umatlas 192603676 Dec 23 19:12 ATLAS.root_0
[2025-12-23 20:29:11] -rw-r--r-- 2 boincer umatlas     15847 Dec 23 19:12 start_atlas.sh
[2025-12-23 20:29:11] -rw-r--r-- 2 boincer umatlas    592382 Dec 23 19:12 input.tar.gz
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas 143725430 Dec 23 20:27 HITS.pool.root.1
[2025-12-23 20:29:11] -rw------- 1 boincer umatlas   1044480 Dec 23 20:29 result.tar.gz
20:29:12 (6204): run_atlas exited; CPU time 48064.515910
20:29:12 (6204): called boinc_finish(0)

</stderr_txt>
]]>

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