Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:10:29 (2911): wrapper (7.7.26015): starting
07:10:29 (2911): wrapper: running run_atlas (--nthreads 8)
[2025-12-23 07:10:29] Arguments: --nthreads 8
[2025-12-23 07:10:29] Threads: 8
[2025-12-23 07:10:29] Checking for CVMFS
[2025-12-23 07:10:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-23 07:10:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-23 07:10:29] Running cvmfs_config stat atlas.cern.ch
[2025-12-23 07:10:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-23 07:10:29] 2.11.2.0 2913 112163 88052 154333 2 1 17871185 20275201 1 130560 0 35940180 99.906 5857449 31093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-23 07:10:29] CVMFS is ok
[2025-12-23 07:10:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-23 07:10:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-23 07:10:29] Further information can be found at the LHC@home message board.
[2025-12-23 07:10:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-23 07:10:29] Checking for apptainer binary...
[2025-12-23 07:10:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-23 07:10:29] Running /usr/bin/apptainer --version
[2025-12-23 07:10:30] apptainer version 1.3.2-1.el7
[2025-12-23 07:10:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-23 07:10:31] c-115-15.aglt2.org
[2025-12-23 07:10:31] apptainer works
[2025-12-23 07:10:31] Set ATHENA_PROC_NUMBER=8
[2025-12-23 07:10:31] Set ATHENA_CORE_NUMBER=8
[2025-12-23 07:10:31] Starting ATLAS job with PandaID=6937446817
[2025-12-23 07:10:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-23 20:21:14]  *** The last 200 lines of the pilot log: ***
[2025-12-23 20:21:14] 2025-12-24 01:20:09,908 | INFO     | monitor loop #3487: job 0:6937446817 is in state 'finished'
[2025-12-23 20:21:14] 2025-12-24 01:20:09,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-23 20:21:14] 2025-12-24 01:20:11,802 | INFO     | time since job start (47362s) is within the limit (174528.0s)
[2025-12-23 20:21:14] 2025-12-24 01:20:12,411 | INFO     | monitor loop #3488: job 0:6937446817 is in state 'finished'
[2025-12-23 20:21:14] 2025-12-24 01:20:12,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-23 20:21:14] 2025-12-24 01:20:13,289 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-23 20:21:14] 2025-12-24 01:20:13,295 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-12-23 20:21:14] 2025-12-24 01:20:13,298 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6937446817/memory_monitor_summary.json (trf name=prmon)
[2025-12-23 20:21:14] 2025-12-24 01:20:13,298 | INFO     | extracted standard info from prmon json
[2025-12-23 20:21:14] 2025-12-24 01:20:13,298 | INFO     | extracted standard memory fields from prmon json
[2025-12-23 20:21:14] 2025-12-24 01:20:13,298 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-23 20:21:14] 2025-12-24 01:20:13,309 | INFO     | fitting pss+swap vs Time
[2025-12-23 20:21:14] 2025-12-24 01:20:13,310 | INFO     | sum of square deviations: 144898721874.0
[2025-12-23 20:21:14] 2025-12-24 01:20:13,321 | INFO     | sum of deviations: 1010423064908.0002
[2025-12-23 20:21:14] 2025-12-24 01:20:13,321 | INFO     | mean x: 1766515519.0
[2025-12-23 20:21:14] 2025-12-24 01:20:13,322 | INFO     | mean y: 3249034.5219072164
[2025-12-23 20:21:14] 2025-12-24 01:20:13,322 | INFO     | intersect: -12315203480.660744
[2025-12-23 20:21:14] 2025-12-24 01:20:13,322 | INFO     | chi2: 6.328964474624923
[2025-12-23 20:21:14] 2025-12-24 01:20:13,323 | INFO     | sum of square deviations: 142115978732.74002
[2025-12-23 20:21:14] 2025-12-24 01:20:13,334 | INFO     | sum of deviations: 1300261164101.0745
[2025-12-23 20:21:14] 2025-12-24 01:20:13,334 | INFO     | mean x: 1766515366.5032425
[2025-12-23 20:21:14] 2025-12-24 01:20:13,334 | INFO     | mean y: 3264913.7704280154
[2025-12-23 20:21:14] 2025-12-24 01:20:13,335 | INFO     | intersect: -16159107166.651981
[2025-12-23 20:21:14] 2025-12-24 01:20:13,335 | INFO     | chi2: 3.195651566679331
[2025-12-23 20:21:14] 2025-12-24 01:20:13,335 | INFO     | current chi2=3.195651566679331 (change=49.507512966902596 %)
[2025-12-23 20:21:14] 2025-12-24 01:20:13,336 | INFO     | sum of square deviations: 139369049941.9791
[2025-12-23 20:21:14] 2025-12-24 01:20:13,347 | INFO     | sum of deviations: 1380160326277.5278
[2025-12-23 20:21:14] 2025-12-24 01:20:13,347 | INFO     | mean x: 1766515214.0052218
[2025-12-23 20:21:14] 2025-12-24 01:20:13,347 | INFO     | mean y: 3269337.868146214
[2025-12-23 20:21:14] 2025-12-24 01:20:13,348 | INFO     | intersect: -17490386643.50406
[2025-12-23 20:21:14] 2025-12-24 01:20:13,348 | INFO     | chi2: 2.7603296135771287
[2025-12-23 20:21:14] 2025-12-24 01:20:13,348 | INFO     | current chi2=2.7603296135771287 (change=13.622322209381368 %)
[2025-12-23 20:21:14] 2025-12-24 01:20:13,348 | INFO     | right removable region: 765
[2025-12-23 20:21:14] 2025-12-24 01:20:13,349 | INFO     | sum of square deviations: 142115742052.74002
[2025-12-23 20:21:14] 2025-12-24 01:20:13,360 | INFO     | sum of deviations: 755735969229.757
[2025-12-23 20:21:14] 2025-12-24 01:20:13,360 | INFO     | mean x: 1766515671.5032425
[2025-12-23 20:21:14] 2025-12-24 01:20:13,360 | INFO     | mean y: 3262969.2970168614
[2025-12-23 20:21:14] 2025-12-24 01:20:13,361 | INFO     | intersect: -9390625518.212158
[2025-12-23 20:21:14] 2025-12-24 01:20:13,361 | INFO     | chi2: 3.789502501966548
[2025-12-23 20:21:14] 2025-12-24 01:20:13,361 | INFO     | current chi2=3.789502501966548 (change=40.12444662693217 %)
[2025-12-23 20:21:14] 2025-12-24 01:20:13,362 | INFO     | sum of square deviations: 139368717308.98825
[2025-12-23 20:21:14] 2025-12-24 01:20:13,373 | INFO     | sum of deviations: 707550661179.7324
[2025-12-23 20:21:14] 2025-12-24 01:20:13,373 | INFO     | mean x: 1766515824.0039165
[2025-12-23 20:21:14] 2025-12-24 01:20:13,373 | INFO     | mean y: 3265642.755874674
[2025-12-23 20:21:14] 2025-12-24 01:20:13,373 | INFO     | intersect: -8965026979.808298
[2025-12-23 20:21:14] 2025-12-24 01:20:13,374 | INFO     | chi2: 3.7533652972243807
[2025-12-23 20:21:14] 2025-12-24 01:20:13,374 | INFO     | current chi2=3.7533652972243807 (change=0.9536134287657559 %)
[2025-12-23 20:21:14] 2025-12-24 01:20:13,374 | INFO     | left removable region: 20
[2025-12-23 20:21:14] 2025-12-24 01:20:13,375 | INFO     | sum of square deviations: 128217694562.12851
[2025-12-23 20:21:14] 2025-12-24 01:20:13,386 | INFO     | sum of deviations: 985043181107.8817
[2025-12-23 20:21:14] 2025-12-24 01:20:13,386 | INFO     | mean x: 1766515793.5127516
[2025-12-23 20:21:14] 2025-12-24 01:20:13,386 | INFO     | mean y: 3291427.1704697986
[2025-12-23 20:21:14] 2025-12-24 01:20:13,386 | INFO     | intersect: -13568114162.843033
[2025-12-23 20:21:14] 2025-12-24 01:20:13,387 | INFO     | chi2: 0.10912612676881495
[2025-12-23 20:21:14] 2025-12-24 01:20:13,387 | INFO     | current memory leak: 7.68 B/s (using 745 data points, chi2=0.11)
[2025-12-23 20:21:14] 2025-12-24 01:20:13,387 | INFO     | could have reported an average CPU frequency of 2397 MHz (29 samples)
[2025-12-23 20:21:14] 2025-12-24 01:20:13,388 | INFO     | ..............................
[2025-12-23 20:21:14] 2025-12-24 01:20:13,388 | INFO     | . Timing measurements:
[2025-12-23 20:21:14] 2025-12-24 01:20:13,388 | INFO     | . get job = 0 s
[2025-12-23 20:21:14] 2025-12-24 01:20:13,388 | INFO     | . initial setup = 2 s
[2025-12-23 20:21:14] 2025-12-24 01:20:13,388 | INFO     | . payload setup = 9 s
[2025-12-23 20:21:14] 2025-12-24 01:20:13,388 | INFO     | . stage-in = 0 s
[2025-12-23 20:21:14] 2025-12-24 01:20:13,388 | INFO     | . payload execution = 47322 s
[2025-12-23 20:21:14] 2025-12-24 01:20:13,388 | INFO     | . stage-out = 3 s
[2025-12-23 20:21:14] 2025-12-24 01:20:13,388 | INFO     | . log creation = 0 s
[2025-12-23 20:21:14] 2025-12-24 01:20:13,389 | INFO     | ..............................
[2025-12-23 20:21:14] 2025-12-24 01:20:13,760 | INFO     | 
[2025-12-23 20:21:14] 2025-12-24 01:20:13,763 | INFO     | job summary report
[2025-12-23 20:21:14] 2025-12-24 01:20:13,764 | INFO     | --------------------------------------------------
[2025-12-23 20:21:14] 2025-12-24 01:20:13,764 | INFO     | PanDA job id: 6937446817
[2025-12-23 20:21:14] 2025-12-24 01:20:13,764 | INFO     | task id: 47961002
[2025-12-23 20:21:14] 2025-12-24 01:20:13,765 | INFO     | errors: (none)
[2025-12-23 20:21:14] 2025-12-24 01:20:13,765 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-23 20:21:14] 2025-12-24 01:20:13,765 | INFO     | pilot state: finished 
[2025-12-23 20:21:14] 2025-12-24 01:20:13,765 | INFO     | transexitcode: 0
[2025-12-23 20:21:14] 2025-12-24 01:20:13,765 | INFO     | exeerrorcode: 0
[2025-12-23 20:21:14] 2025-12-24 01:20:13,766 | INFO     | exeerrordiag: 
[2025-12-23 20:21:14] 2025-12-24 01:20:13,766 | INFO     | exitcode: 0
[2025-12-23 20:21:14] 2025-12-24 01:20:13,766 | INFO     | exitmsg: OK
[2025-12-23 20:21:14] 2025-12-24 01:20:13,766 | INFO     | cpuconsumptiontime: 368762 s
[2025-12-23 20:21:14] 2025-12-24 01:20:13,766 | INFO     | nevents: 1000
[2025-12-23 20:21:14] 2025-12-24 01:20:13,766 | INFO     | neventsw: 0
[2025-12-23 20:21:14] 2025-12-24 01:20:13,767 | INFO     | pid: 13163
[2025-12-23 20:21:14] 2025-12-24 01:20:13,767 | INFO     | pgrp: 13163
[2025-12-23 20:21:14] 2025-12-24 01:20:13,767 | INFO     | corecount: 8
[2025-12-23 20:21:14] 2025-12-24 01:20:13,767 | INFO     | event service: False
[2025-12-23 20:21:14] 2025-12-24 01:20:13,767 | INFO     | sizes: {0: 2284572, 6: 2284834, 11: 2284862, 47334: 2331663, 47338: 2340657, 47341: 2340713, 47347: 2341087}
[2025-12-23 20:21:14] 2025-12-24 01:20:13,768 | INFO     | --------------------------------------------------
[2025-12-23 20:21:14] 2025-12-24 01:20:13,768 | INFO     | 
[2025-12-23 20:21:14] 2025-12-24 01:20:13,768 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-23 20:21:14] 2025-12-24 01:20:13,797 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,797 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,798 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,798 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,798 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,798 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,798 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,798 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,799 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,799 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,800 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,800 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-23 20:21:14] 2025-12-24 01:20:13,800 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,801 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-23 20:21:14] 2025-12-24 01:20:13,801 | INFO     | job 6937446817 has completed (purged errors)
[2025-12-23 20:21:14] 2025-12-24 01:20:13,802 | INFO     | overall cleanup function is called
[2025-12-23 20:21:14] 2025-12-24 01:20:14,818 | INFO     | --- collectZombieJob: --- 10, [13163]
[2025-12-23 20:21:14] 2025-12-24 01:20:14,818 | INFO     | zombie collector waiting for pid 13163
[2025-12-23 20:21:14] 2025-12-24 01:20:14,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-23 20:21:14] 2025-12-24 01:20:14,818 | INFO     | collected zombie processes
[2025-12-23 20:21:14] 2025-12-24 01:20:14,818 | INFO     | will attempt to kill all subprocesses of pid=13163
[2025-12-23 20:21:14] 2025-12-24 01:20:14,912 | INFO     | process IDs to be killed: [13163] (in reverse order)
[2025-12-23 20:21:14] 2025-12-24 01:20:14,970 | WARNING  | found no corresponding commands to process id(s)
[2025-12-23 20:21:14] 2025-12-24 01:20:14,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-23 20:21:14] 2025-12-24 01:20:14,975 | INFO     | did not find any defunct processes belonging to 13163
[2025-12-23 20:21:14] 2025-12-24 01:20:14,978 | INFO     | did not find any defunct processes belonging to 13163
[2025-12-23 20:21:14] 2025-12-24 01:20:14,979 | INFO     | ready for new job
[2025-12-23 20:21:14] 2025-12-24 01:20:14,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-23 20:21:14] 2025-12-24 01:20:14,983 | INFO     | ***************************************
[2025-12-23 20:21:14] 2025-12-24 01:20:14,983 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-23 20:21:14] 2025-12-24 01:20:14,983 | INFO     | ***************************************
[2025-12-23 20:21:14] 2025-12-24 01:20:14,983 | INFO     | 
[2025-12-23 20:21:14] 2025-12-24 01:20:14,984 | INFO     | architecture information:
[2025-12-23 20:21:14] 2025-12-24 01:20:14,985 | INFO     | executing command: cat /etc/os-release
[2025-12-23 20:21:14] 2025-12-24 01:20:15,005 | INFO     | cat /etc/os-release:
[2025-12-23 20:21:14] NAME="CentOS Linux"
[2025-12-23 20:21:14] VERSION="7 (Core)"
[2025-12-23 20:21:14] ID="centos"
[2025-12-23 20:21:14] ID_LIKE="rhel fedora"
[2025-12-23 20:21:14] VERSION_ID="7"
[2025-12-23 20:21:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-23 20:21:14] ANSI_COLOR="0;31"
[2025-12-23 20:21:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-23 20:21:14] HOME_URL="https://www.centos.org/"
[2025-12-23 20:21:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-23 20:21:14] 
[2025-12-23 20:21:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-23 20:21:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-23 20:21:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-23 20:21:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-23 20:21:14] 
[2025-12-23 20:21:14] 2025-12-24 01:20:15,005 | INFO     | ***************************************
[2025-12-23 20:21:14] 2025-12-24 01:20:15,509 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-23 20:21:14] 2025-12-24 01:20:15,530 | INFO     | sufficient remaining disk space (17544773632 B)
[2025-12-23 20:21:14] 2025-12-24 01:20:15,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-23 20:21:14] 2025-12-24 01:20:15,531 | INFO     | current server update state: UPDATING_FINAL
[2025-12-23 20:21:14] 2025-12-24 01:20:15,531 | INFO     | update_server=False
[2025-12-23 20:21:14] 2025-12-24 01:20:15,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-23 20:21:14] 2025-12-24 01:20:15,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-23 20:21:14] 2025-12-24 01:20:15,666 | INFO     | all data control threads have been joined
[2025-12-23 20:21:14] 2025-12-24 01:20:15,922 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-23 20:21:14] 2025-12-24 01:20:15,922 | INFO     | aborting loop
[2025-12-23 20:21:14] 2025-12-24 01:20:16,537 | INFO     | [job] retrieve thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:16,671 | INFO     | [data] control thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:16,691 | INFO     | all payload control threads have been joined
[2025-12-23 20:21:14] 2025-12-24 01:20:16,701 | INFO     | all job control threads have been joined
[2025-12-23 20:21:14] 2025-12-24 01:20:16,928 | INFO     | [job] job monitor thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:17,050 | INFO     | [payload] execute_payloads thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:17,435 | INFO     | [data] copytool_in thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:17,533 | INFO     | [data] copytool_out thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:17,697 | INFO     | [payload] control thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:17,707 | INFO     | [job] control thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:17,723 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:17,835 | INFO     | [job] validate thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:17,835 | INFO     | [payload] validate_pre thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:17,939 | INFO     | [job] create_data_payload thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:17,953 | INFO     | [payload] failed_post thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:18,126 | INFO     | [payload] validate_post thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:18,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-23 20:21:14] 2025-12-24 01:20:18,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-23 20:21:14] 2025-12-24 01:20:19,485 | INFO     | [job] queue monitor thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:22,151 | INFO     | [data] queue_monitor thread has finished
[2025-12-23 20:21:14] 2025-12-24 01:20:45,014 | INFO     | PID=6671 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-23 20:21:14] 2025-12-24 01:20:45,015 | INFO     | found 0 job(s) in 20 queues
[2025-12-23 20:21:14] 2025-12-24 01:20:45,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-23 20:21:14] 2025-12-24 01:20:45,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-23 20:21:14] 2025-12-24 01:21:07,716 | INFO     | [monitor] cgroup control has ended
[2025-12-23 20:21:14] 2025-12-24 01:21:08,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140062752556864)>', '<ExcThread(monitor, started 140061483980544)>']
[2025-12-23 20:21:14] 2025-12-24 01:21:09,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-23 20:21:14] 2025-12-24 01:21:09,138 | INFO     | [monitor] control thread has ended
[2025-12-23 20:21:14] 2025-12-24 01:21:13,702 | INFO     | all workflow threads have been joined
[2025-12-23 20:21:14] 2025-12-24 01:21:13,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-23 20:21:14] 2025-12-24 01:21:13,703 | INFO     | traces error code: 0
[2025-12-23 20:21:14] 2025-12-24 01:21:13,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-23 20:21:14] 2025-12-24 01:21:13,818 [wrapper] ==== pilot stdout END ====
[2025-12-23 20:21:14] 2025-12-24 01:21:13,822 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-23 20:21:14] 2025-12-24 01:21:13,825 [wrapper] pilotpid: 6671
[2025-12-23 20:21:14] 2025-12-24 01:21:13,830 [wrapper] Pilot exit status: 0
[2025-12-23 20:21:14] 2025-12-24 01:21:13,845 [wrapper] pandaids: 6937446817
[2025-12-23 20:21:14] 2025-12-24 01:21:13,891 [wrapper] cleanup supervisor_pilot 25492 6672
[2025-12-23 20:21:14] 2025-12-24 01:21:13,896 [wrapper] Test setup, not cleaning
[2025-12-23 20:21:14] 2025-12-24 01:21:13,900 [wrapper] apfmon messages muted
[2025-12-23 20:21:14] 2025-12-24 01:21:13,905 [wrapper] ==== wrapper stdout END ====
[2025-12-23 20:21:14] 2025-12-24 01:21:13,909 [wrapper] ==== wrapper stderr END ====
[2025-12-23 20:21:14]  *** Error codes and diagnostics ***
[2025-12-23 20:21:14]     "exeErrorCode": 0,
[2025-12-23 20:21:14]     "exeErrorDiag": "",
[2025-12-23 20:21:14]     "pilotErrorCode": 0,
[2025-12-23 20:21:14]     "pilotErrorDiag": "",
[2025-12-23 20:21:14]  *** Listing of results directory ***
[2025-12-23 20:21:14] total 1255056
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas    579449 Dec 20 00:05 pilot3.tar.gz
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas      5112 Dec 20 00:05 queuedata.json
[2025-12-23 20:21:14] -rwx------ 1 boincer umatlas     36322 Dec 20 00:05 runpilot2-wrapper.sh
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas       100 Dec 23 07:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-23 20:21:14] -rwxr-xr-x 1 boincer umatlas      7986 Dec 23 07:10 run_atlas
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas       105 Dec 23 07:10 job.xml
[2025-12-23 20:21:14] -rw-r--r-- 2 boincer umatlas 392842853 Dec 23 07:10 EVNT.47961000._000052.pool.root.1
[2025-12-23 20:21:14] -rw-r--r-- 2 boincer umatlas     15847 Dec 23 07:10 start_atlas.sh
[2025-12-23 20:21:14] drwxrwx--x 2 boincer umatlas      4096 Dec 23 07:10 shared
[2025-12-23 20:21:14] -rw-r--r-- 2 boincer umatlas    592602 Dec 23 07:10 input.tar.gz
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas         0 Dec 23 07:10 boinc_lockfile
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas      2892 Dec 23 07:10 pandaJob.out
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas        57 Dec 23 07:10 setup.sh.local
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas    987824 Dec 23 07:10 agis_schedconf.cvmfs.json
[2025-12-23 20:21:14] drwx------ 5 boincer umatlas      4096 Dec 23 07:10 pilot3
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas      5911 Dec 23 20:09 init_data.xml
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas       533 Dec 23 20:10 boinc_task_state.xml
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas 871353259 Dec 23 20:19 HITS.47961002._000500.pool.root.1
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas        95 Dec 23 20:19 pilot_heartbeat.json
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas      1060 Dec 23 20:19 memory_monitor_summary.json
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas   1516240 Dec 23 20:20 agis_ddmendpoints.agis.ALL.json
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas   2006840 Dec 23 20:20 log.47961002._000500.job.log.tgz.1
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas      8655 Dec 23 20:20 heartbeat.json
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas        29 Dec 23 20:20 wrapper_checkpoint.txt
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas      8192 Dec 23 20:20 boinc_mmap_file
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas      4745 Dec 23 20:21 pilotlog.txt
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas   6528206 Dec 23 20:21 log.47961002._000500.job.log.1
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas       353 Dec 23 20:21 output.list
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas       620 Dec 23 20:21 runtime_log
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas   8550400 Dec 23 20:21 result.tar.gz
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas       668 Dec 23 20:21 z4aLDm4K4q8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjWcKDm3x1zJo.diag
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas      9343 Dec 23 20:21 runtime_log.err
[2025-12-23 20:21:14] -rw-r--r-- 1 boincer umatlas     21208 Dec 23 20:21 stderr.txt
[2025-12-23 20:21:14] HITS file was successfully produced:
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas 871353259 Dec 23 20:19 shared/HITS.pool.root.1
[2025-12-23 20:21:14]  *** Contents of shared directory: ***
[2025-12-23 20:21:14] total 1243520
[2025-12-23 20:21:14] -rw-r--r-- 2 boincer umatlas 392842853 Dec 23 07:10 ATLAS.root_0
[2025-12-23 20:21:14] -rw-r--r-- 2 boincer umatlas     15847 Dec 23 07:10 start_atlas.sh
[2025-12-23 20:21:14] -rw-r--r-- 2 boincer umatlas    592602 Dec 23 07:10 input.tar.gz
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas 871353259 Dec 23 20:19 HITS.pool.root.1
[2025-12-23 20:21:14] -rw------- 1 boincer umatlas   8550400 Dec 23 20:21 result.tar.gz
20:21:16 (2911): run_atlas exited; CPU time 366781.187246
20:21:16 (2911): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN