Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:29:05 (659058): wrapper (7.7.26015): starting
04:29:05 (659058): wrapper: running run_atlas (--nthreads 9)
[2025-12-23 04:29:05] Arguments: --nthreads 9
[2025-12-23 04:29:05] Threads: 9
[2025-12-23 04:29:05] Checking for CVMFS
[2025-12-23 04:29:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-23 04:29:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-23 04:29:05] Running cvmfs_config stat atlas.cern.ch
[2025-12-23 04:29:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-23 04:29:06] 2.13.3.0 12525 68615 221368 154328 0 542 40763444 40960000 17413 16776704 0 478023253 99.655 442980016 35295 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-23 04:29:06] CVMFS is ok
[2025-12-23 04:29:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-23 04:29:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-23 04:29:06] Further information can be found at the LHC@home message board.
[2025-12-23 04:29:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-23 04:29:06] Checking for apptainer binary...
[2025-12-23 04:29:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-23 04:29:06] Running /usr/bin/apptainer --version
[2025-12-23 04:29:06] apptainer version 1.4.5-2.el9
[2025-12-23 04:29:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-23 04:29:06] c7-4-30.aglt2.org
[2025-12-23 04:29:06] apptainer works
[2025-12-23 04:29:06] Set ATHENA_PROC_NUMBER=9
[2025-12-23 04:29:06] Set ATHENA_CORE_NUMBER=9
[2025-12-23 04:29:06] Starting ATLAS job with PandaID=6929508342
[2025-12-23 04:29:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-23 06:59:41]  *** The last 200 lines of the pilot log: ***
[2025-12-23 06:59:41] 2025-12-23 11:58:35,814 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-23 06:59:41] 2025-12-23 11:58:35,819 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3175.5314479166664
[2025-12-23 06:59:41] 2025-12-23 11:58:35,869 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6929508342/memory_monitor_summary.json (trf name=prmon)
[2025-12-23 06:59:41] 2025-12-23 11:58:35,870 | INFO     | extracted standard info from prmon json
[2025-12-23 06:59:41] 2025-12-23 11:58:35,871 | INFO     | extracted standard memory fields from prmon json
[2025-12-23 06:59:41] 2025-12-23 11:58:35,871 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-23 06:59:41] 2025-12-23 11:58:35,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-23 06:59:41] 2025-12-23 11:58:35,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-23 06:59:41] 2025-12-23 11:58:35,878 | INFO     | fitting pss+swap vs Time
[2025-12-23 06:59:41] 2025-12-23 11:58:35,878 | INFO     | sum of square deviations: 984941258.0
[2025-12-23 06:59:41] 2025-12-23 11:58:35,879 | INFO     | sum of deviations: 1391042169.999998
[2025-12-23 06:59:41] 2025-12-23 11:58:35,879 | INFO     | mean x: 1766486642.0
[2025-12-23 06:59:41] 2025-12-23 11:58:35,879 | INFO     | mean y: 2521121.4421768705
[2025-12-23 06:59:41] 2025-12-23 11:58:35,879 | INFO     | intersect: -2492305236.7848535
[2025-12-23 06:59:41] 2025-12-23 11:58:35,880 | INFO     | chi2: 2.593065878062435
[2025-12-23 06:59:41] 2025-12-23 11:58:35,880 | INFO     | sum of square deviations: 887813855.5
[2025-12-23 06:59:41] 2025-12-23 11:58:35,881 | INFO     | sum of deviations: 10619483595.000002
[2025-12-23 06:59:41] 2025-12-23 11:58:35,881 | INFO     | mean x: 1766486489.5
[2025-12-23 06:59:41] 2025-12-23 11:58:35,881 | INFO     | mean y: 2535208.0985915493
[2025-12-23 06:59:41] 2025-12-23 11:58:35,881 | INFO     | intersect: -21127090309.481983
[2025-12-23 06:59:41] 2025-12-23 11:58:35,881 | INFO     | chi2: 1.91683187048797
[2025-12-23 06:59:41] 2025-12-23 11:58:35,881 | INFO     | current chi2=1.91683187048797 (change=26.078551003870125 %)
[2025-12-23 06:59:41] 2025-12-23 11:58:35,881 | INFO     | sum of square deviations: 797291228.0
[2025-12-23 06:59:41] 2025-12-23 11:58:35,882 | INFO     | sum of deviations: 10375537153.0
[2025-12-23 06:59:41] 2025-12-23 11:58:35,882 | INFO     | mean x: 1766486337.0
[2025-12-23 06:59:41] 2025-12-23 11:58:35,887 | INFO     | mean y: 2534797.1459854012
[2025-12-23 06:59:41] 2025-12-23 11:58:35,887 | INFO     | intersect: -22985608024.626514
[2025-12-23 06:59:41] 2025-12-23 11:58:35,887 | INFO     | chi2: 1.9194495170694295
[2025-12-23 06:59:41] 2025-12-23 11:58:35,887 | INFO     | current chi2=1.9194495170694295 (change=-0.13656109446849798 %)
[2025-12-23 06:59:41] 2025-12-23 11:58:35,887 | INFO     | right removable region: 136
[2025-12-23 06:59:41] 2025-12-23 11:58:35,888 | INFO     | sum of square deviations: 887813855.5
[2025-12-23 06:59:41] 2025-12-23 11:58:35,888 | INFO     | sum of deviations: -25724404946.5
[2025-12-23 06:59:41] 2025-12-23 11:58:35,888 | INFO     | mean x: 1766486794.5
[2025-12-23 06:59:41] 2025-12-23 11:58:35,888 | INFO     | mean y: 2563166.528169014
[2025-12-23 06:59:41] 2025-12-23 11:58:35,888 | INFO     | intersect: 51186515019.55569
[2025-12-23 06:59:41] 2025-12-23 11:58:35,889 | INFO     | chi2: 0.8108598768899692
[2025-12-23 06:59:41] 2025-12-23 11:58:35,889 | INFO     | current chi2=0.8108598768899692 (change=68.72968466594254 %)
[2025-12-23 06:59:41] 2025-12-23 11:58:35,889 | INFO     | sum of square deviations: 797291228.0
[2025-12-23 06:59:41] 2025-12-23 11:58:35,890 | INFO     | sum of deviations: -26278720456.0
[2025-12-23 06:59:41] 2025-12-23 11:58:35,890 | INFO     | mean x: 1766486947.0
[2025-12-23 06:59:41] 2025-12-23 11:58:35,890 | INFO     | mean y: 2564001.7372262776
[2025-12-23 06:59:41] 2025-12-23 11:58:35,890 | INFO     | intersect: 58225977278.00356
[2025-12-23 06:59:41] 2025-12-23 11:58:35,897 | INFO     | chi2: 0.783306382101058
[2025-12-23 06:59:41] 2025-12-23 11:58:35,898 | INFO     | current chi2=0.783306382101058 (change=3.398058724349748 %)
[2025-12-23 06:59:41] 2025-12-23 11:58:35,898 | INFO     | left removable region: 20
[2025-12-23 06:59:41] 2025-12-23 11:58:35,898 | INFO     | sum of square deviations: 483971865.0
[2025-12-23 06:59:41] 2025-12-23 11:58:35,899 | INFO     | sum of deviations: -11709790427.5
[2025-12-23 06:59:41] 2025-12-23 11:58:35,899 | INFO     | mean x: 1766486916.5
[2025-12-23 06:59:41] 2025-12-23 11:58:35,899 | INFO     | mean y: 2572897.25
[2025-12-23 06:59:41] 2025-12-23 11:58:35,899 | INFO     | intersect: 42743056551.4717
[2025-12-23 06:59:41] 2025-12-23 11:58:35,899 | INFO     | chi2: 0.06781036145618069
[2025-12-23 06:59:41] 2025-12-23 11:58:35,900 | INFO     | current memory leak: -24.20 B/s (using 116 data points, chi2=0.07)
[2025-12-23 06:59:41] 2025-12-23 11:58:35,900 | INFO     | could have reported an average CPU frequency of 3116 MHz (8 samples)
[2025-12-23 06:59:41] 2025-12-23 11:58:35,900 | INFO     | ..............................
[2025-12-23 06:59:41] 2025-12-23 11:58:35,900 | INFO     | . Timing measurements:
[2025-12-23 06:59:41] 2025-12-23 11:58:35,900 | INFO     | . get job = 0 s
[2025-12-23 06:59:41] 2025-12-23 11:58:35,900 | INFO     | . initial setup = 2 s
[2025-12-23 06:59:41] 2025-12-23 11:58:35,901 | INFO     | . payload setup = 7 s
[2025-12-23 06:59:41] 2025-12-23 11:58:35,901 | INFO     | . stage-in = 0 s
[2025-12-23 06:59:41] 2025-12-23 11:58:35,901 | INFO     | . payload execution = 8919 s
[2025-12-23 06:59:41] 2025-12-23 11:58:35,901 | INFO     | . stage-out = 0 s
[2025-12-23 06:59:41] 2025-12-23 11:58:35,901 | INFO     | . log creation = 0 s
[2025-12-23 06:59:41] 2025-12-23 11:58:35,901 | INFO     | ..............................
[2025-12-23 06:59:41] 2025-12-23 11:58:36,023 | INFO     | 
[2025-12-23 06:59:41] 2025-12-23 11:58:36,023 | INFO     | job summary report
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | --------------------------------------------------
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | PanDA job id: 6929508342
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | task id: 47886933
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | errors: (none)
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | pilot state: finished 
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | transexitcode: 0
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | exeerrorcode: 0
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | exeerrordiag: 
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | exitcode: 0
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | exitmsg: OK
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | cpuconsumptiontime: 33730 s
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | nevents: 400
[2025-12-23 06:59:41] 2025-12-23 11:58:36,024 | INFO     | neventsw: 0
[2025-12-23 06:59:41] 2025-12-23 11:58:36,025 | INFO     | pid: 673556
[2025-12-23 06:59:41] 2025-12-23 11:58:36,025 | INFO     | pgrp: 673556
[2025-12-23 06:59:41] 2025-12-23 11:58:36,025 | INFO     | corecount: 9
[2025-12-23 06:59:41] 2025-12-23 11:58:36,025 | INFO     | event service: False
[2025-12-23 06:59:41] 2025-12-23 11:58:36,025 | INFO     | sizes: {0: 2283959, 5: 2284221, 11: 2284277, 8930: 2312530, 8932: 2321528, 8935: 2321584, 8941: 2321906}
[2025-12-23 06:59:41] 2025-12-23 11:58:36,025 | INFO     | --------------------------------------------------
[2025-12-23 06:59:41] 2025-12-23 11:58:36,025 | INFO     | 
[2025-12-23 06:59:41] 2025-12-23 11:58:36,025 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-23 06:59:41] 2025-12-23 11:58:36,052 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,054 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,054 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,054 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-23 06:59:41] 2025-12-23 11:58:36,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-23 06:59:41] 2025-12-23 11:58:36,054 | INFO     | job 6929508342 has completed (purged errors)
[2025-12-23 06:59:41] 2025-12-23 11:58:36,054 | INFO     | overall cleanup function is called
[2025-12-23 06:59:41] 2025-12-23 11:58:37,092 | INFO     | --- collectZombieJob: --- 10, [673556]
[2025-12-23 06:59:41] 2025-12-23 11:58:37,092 | INFO     | zombie collector waiting for pid 673556
[2025-12-23 06:59:41] 2025-12-23 11:58:37,093 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-23 06:59:41] 2025-12-23 11:58:37,093 | INFO     | collected zombie processes
[2025-12-23 06:59:41] 2025-12-23 11:58:37,093 | INFO     | will attempt to kill all subprocesses of pid=673556
[2025-12-23 06:59:41] 2025-12-23 11:58:37,723 | INFO     | process IDs to be killed: [673556] (in reverse order)
[2025-12-23 06:59:41] 2025-12-23 11:58:37,872 | WARNING  | found no corresponding commands to process id(s)
[2025-12-23 06:59:41] 2025-12-23 11:58:37,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-23 06:59:41] 2025-12-23 11:58:37,892 | INFO     | did not find any defunct processes belonging to 673556
[2025-12-23 06:59:41] 2025-12-23 11:58:37,955 | INFO     | did not find any defunct processes belonging to 673556
[2025-12-23 06:59:41] 2025-12-23 11:58:37,956 | INFO     | ready for new job
[2025-12-23 06:59:41] 2025-12-23 11:58:37,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-23 06:59:41] 2025-12-23 11:58:37,958 | INFO     | ***************************************
[2025-12-23 06:59:41] 2025-12-23 11:58:37,959 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-23 06:59:41] 2025-12-23 11:58:37,959 | INFO     | ***************************************
[2025-12-23 06:59:41] 2025-12-23 11:58:37,959 | INFO     | 
[2025-12-23 06:59:41] 2025-12-23 11:58:37,964 | INFO     | architecture information:
[2025-12-23 06:59:41] 2025-12-23 11:58:37,964 | INFO     | executing command: cat /etc/os-release
[2025-12-23 06:59:41] 2025-12-23 11:58:37,997 | INFO     | cat /etc/os-release:
[2025-12-23 06:59:41] NAME="CentOS Linux"
[2025-12-23 06:59:41] VERSION="7 (Core)"
[2025-12-23 06:59:41] ID="centos"
[2025-12-23 06:59:41] ID_LIKE="rhel fedora"
[2025-12-23 06:59:41] VERSION_ID="7"
[2025-12-23 06:59:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-23 06:59:41] ANSI_COLOR="0;31"
[2025-12-23 06:59:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-23 06:59:41] HOME_URL="https://www.centos.org/"
[2025-12-23 06:59:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-23 06:59:41] 
[2025-12-23 06:59:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-23 06:59:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-23 06:59:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-23 06:59:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-23 06:59:41] 
[2025-12-23 06:59:41] 2025-12-23 11:58:37,997 | INFO     | ***************************************
[2025-12-23 06:59:41] 2025-12-23 11:58:38,501 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-23 06:59:41] 2025-12-23 11:58:38,542 | INFO     | sufficient remaining disk space (129351286784 B)
[2025-12-23 06:59:41] 2025-12-23 11:58:38,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-23 06:59:41] 2025-12-23 11:58:38,542 | INFO     | current server update state: UPDATING_FINAL
[2025-12-23 06:59:41] 2025-12-23 11:58:38,542 | INFO     | update_server=False
[2025-12-23 06:59:41] 2025-12-23 11:58:38,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-23 06:59:41] 2025-12-23 11:58:38,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-23 06:59:41] 2025-12-23 11:58:38,543 | INFO     | aborting loop
[2025-12-23 06:59:41] 2025-12-23 11:58:38,573 | INFO     | all data control threads have been joined
[2025-12-23 06:59:41] 2025-12-23 11:58:39,339 | INFO     | all payload control threads have been joined
[2025-12-23 06:59:41] 2025-12-23 11:58:39,548 | INFO     | [job] retrieve thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:39,549 | INFO     | [job] job monitor thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:39,579 | INFO     | [data] control thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:39,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-23 06:59:41] 2025-12-23 11:58:39,775 | INFO     | [payload] execute_payloads thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:39,931 | INFO     | [payload] failed_post thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:40,122 | INFO     | [data] copytool_in thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:40,153 | INFO     | [payload] validate_pre thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:40,165 | INFO     | all job control threads have been joined
[2025-12-23 06:59:41] 2025-12-23 11:58:40,345 | INFO     | [payload] control thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:40,439 | INFO     | [job] validate thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:40,731 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-23 06:59:41] 2025-12-23 11:58:40,835 | INFO     | [payload] validate_post thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:40,851 | INFO     | [job] create_data_payload thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:41,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-23 06:59:41] 2025-12-23 11:58:41,171 | INFO     | [job] control thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:41,739 | INFO     | [data] copytool_out thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:42,041 | INFO     | [job] queue monitor thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:44,739 | INFO     | [data] queue_monitor thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:58:49,254 | INFO     | job.realtimelogging is not enabled
[2025-12-23 06:59:41] 2025-12-23 11:58:50,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-23 06:59:41] 2025-12-23 11:59:09,158 | INFO     | PID=662766 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-23 06:59:41] 2025-12-23 11:59:09,161 | INFO     | .. there are 21 such processes running
[2025-12-23 06:59:41] 2025-12-23 11:59:09,162 | INFO     | found 0 job(s) in 20 queues
[2025-12-23 06:59:41] 2025-12-23 11:59:09,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-23 06:59:41] 2025-12-23 11:59:09,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-23 06:59:41] 2025-12-23 11:59:16,257 [wrapper] supervise_pilot (15 min periods counter: 11)
[2025-12-23 06:59:41] 2025-12-23 11:59:33,864 | INFO     | [monitor] cgroup control has ended
[2025-12-23 06:59:41] 2025-12-23 11:59:35,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140346983380800)>', '<ExcThread(monitor, started 140346495325952)>']
[2025-12-23 06:59:41] 2025-12-23 11:59:36,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-23 06:59:41] 2025-12-23 11:59:36,320 | INFO     | [monitor] control thread has ended
[2025-12-23 06:59:41] 2025-12-23 11:59:40,557 | INFO     | all workflow threads have been joined
[2025-12-23 06:59:41] 2025-12-23 11:59:40,557 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-23 06:59:41] 2025-12-23 11:59:40,558 | INFO     | traces error code: 0
[2025-12-23 06:59:41] 2025-12-23 11:59:40,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-23 06:59:41] 2025-12-23 11:59:40,893 [wrapper] ==== pilot stdout END ====
[2025-12-23 06:59:41] 2025-12-23 11:59:40,896 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-23 06:59:41] 2025-12-23 11:59:40,899 [wrapper] pilotpid: 662766
[2025-12-23 06:59:41] 2025-12-23 11:59:40,902 [wrapper] Pilot exit status: 0
[2025-12-23 06:59:41] 2025-12-23 11:59:40,915 [wrapper] pandaids: 6929508342
[2025-12-23 06:59:41] 2025-12-23 11:59:41,021 [wrapper] cleanup supervisor_pilot 1183766 662767
[2025-12-23 06:59:41] 2025-12-23 11:59:41,039 [wrapper] Test setup, not cleaning
[2025-12-23 06:59:41] 2025-12-23 11:59:41,042 [wrapper] apfmon messages muted
[2025-12-23 06:59:41] 2025-12-23 11:59:41,045 [wrapper] ==== wrapper stdout END ====
[2025-12-23 06:59:41] 2025-12-23 11:59:41,047 [wrapper] ==== wrapper stderr END ====
[2025-12-23 06:59:41]  *** Error codes and diagnostics ***
[2025-12-23 06:59:41]     "exeErrorCode": 0,
[2025-12-23 06:59:41]     "exeErrorDiag": "",
[2025-12-23 06:59:41]     "pilotErrorCode": 0,
[2025-12-23 06:59:41]     "pilotErrorDiag": "",
[2025-12-23 06:59:41]  *** Listing of results directory ***
[2025-12-23 06:59:41] total 331568
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas      5112 Dec 14 18:13 queuedata.json
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas    579449 Dec 14 18:13 pilot3.tar.gz
[2025-12-23 06:59:41] -rwx------. 1 boincer umatlas     36322 Dec 14 18:15 runpilot2-wrapper.sh
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas       100 Dec 23 04:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-23 06:59:41] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 23 04:29 run_atlas
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas       105 Dec 23 04:29 job.xml
[2025-12-23 06:59:41] -rw-r--r--. 2 boincer umatlas 190159376 Dec 23 04:29 EVNT.47886929._000221.pool.root.1
[2025-12-23 06:59:41] -rw-r--r--. 2 boincer umatlas    592398 Dec 23 04:29 input.tar.gz
[2025-12-23 06:59:41] -rw-r--r--. 2 boincer umatlas     15847 Dec 23 04:29 start_atlas.sh
[2025-12-23 06:59:41] drwxrwx--x. 2 boincer umatlas      4096 Dec 23 04:29 shared
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas         0 Dec 23 04:29 boinc_lockfile
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas      2510 Dec 23 04:29 pandaJob.out
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas        57 Dec 23 04:29 setup.sh.local
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas    987824 Dec 23 04:29 agis_schedconf.cvmfs.json
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas   1516240 Dec 23 04:29 agis_ddmendpoints.agis.ALL.json
[2025-12-23 06:59:41] drwx------. 5 boincer umatlas      4096 Dec 23 04:29 pilot3
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas      6947 Dec 23 06:55 init_data.xml
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas 142247770 Dec 23 06:57 HITS.47886933._004621.pool.root.1
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas       529 Dec 23 06:57 boinc_task_state.xml
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas      1033 Dec 23 06:58 memory_monitor_summary.json
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas    383938 Dec 23 06:58 log.47886933._004621.job.log.tgz.1
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas      7765 Dec 23 06:58 heartbeat.json
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas        95 Dec 23 06:59 pilot_heartbeat.json
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas        27 Dec 23 06:59 wrapper_checkpoint.txt
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas      8192 Dec 23 06:59 boinc_mmap_file
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas      4896 Dec 23 06:59 pilotlog.txt
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas   1218358 Dec 23 06:59 log.47886933._004621.job.log.1
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas       357 Dec 23 06:59 output.list
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas       620 Dec 23 06:59 runtime_log
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas   1617920 Dec 23 06:59 result.tar.gz
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas      9337 Dec 23 06:59 runtime_log.err
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas       653 Dec 23 06:59 Kf2NDm7TAp8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIZWKDmwhUfJo.diag
[2025-12-23 06:59:41] -rw-r--r--. 1 boincer umatlas     21012 Dec 23 06:59 stderr.txt
[2025-12-23 06:59:41] HITS file was successfully produced:
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas 142247770 Dec 23 06:57 shared/HITS.pool.root.1
[2025-12-23 06:59:41]  *** Contents of shared directory: ***
[2025-12-23 06:59:41] total 326804
[2025-12-23 06:59:41] -rw-r--r--. 2 boincer umatlas 190159376 Dec 23 04:29 ATLAS.root_0
[2025-12-23 06:59:41] -rw-r--r--. 2 boincer umatlas    592398 Dec 23 04:29 input.tar.gz
[2025-12-23 06:59:41] -rw-r--r--. 2 boincer umatlas     15847 Dec 23 04:29 start_atlas.sh
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas 142247770 Dec 23 06:57 HITS.pool.root.1
[2025-12-23 06:59:41] -rw-------. 1 boincer umatlas   1617920 Dec 23 06:59 result.tar.gz
06:59:42 (659058): run_atlas exited; CPU time 34032.486937
06:59:42 (659058): called boinc_finish(0)

</stderr_txt>
]]>

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