Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:28:50 (1462875): wrapper (7.7.26015): starting
00:28:50 (1462875): wrapper: running run_atlas (--nthreads 8)
[2025-12-21 00:28:50] Arguments: --nthreads 8
[2025-12-21 00:28:50] Threads: 8
[2025-12-21 00:28:50] Checking for CVMFS
[2025-12-21 00:28:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-21 00:28:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-21 00:28:51] Running cvmfs_config stat atlas.cern.ch
[2025-12-21 00:28:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-21 00:28:51] 2.13.0.0 253316 752 67588 154255 0 253 5433634 6144001 13085 130560 0 3253355 99.843 318465 906 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-21 00:28:51] CVMFS is ok
[2025-12-21 00:28:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-21 00:28:51] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-21 00:28:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-21 00:28:51] Further information can be found at the LHC@home message board.
[2025-12-21 00:28:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-21 00:28:51] Checking for apptainer binary...
[2025-12-21 00:28:51] apptainer is not installed, using version from CVMFS
[2025-12-21 00:28:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-21 00:28:51] mz32
[2025-12-21 00:28:51] apptainer works
[2025-12-21 00:28:51] Set ATHENA_PROC_NUMBER=8
[2025-12-21 00:28:51] Set ATHENA_CORE_NUMBER=8
[2025-12-21 00:28:51] Starting ATLAS job with PandaID=6937273786
[2025-12-21 00:28:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-21 13:43:49]  *** The last 200 lines of the pilot log: ***
[2025-12-21 13:43:49] 2025-12-21 21:43:14,851 | INFO     | monitor loop #3348: job 0:6937273786 is in state 'finished'
[2025-12-21 13:43:49] 2025-12-21 21:43:14,852 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-21 13:43:49] 2025-12-21 21:43:15,636 | INFO     | time since job start (47649s) is within the limit (174528.0s)
[2025-12-21 13:43:49] 2025-12-21 21:43:16,634 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-21 13:43:49] 2025-12-21 21:43:16,659 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 1988.1751874999998
[2025-12-21 13:43:49] 2025-12-21 21:43:16,687 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6937273786/memory_monitor_summary.json (trf name=prmon)
[2025-12-21 13:43:49] 2025-12-21 21:43:16,688 | INFO     | extracted standard info from prmon json
[2025-12-21 13:43:49] 2025-12-21 21:43:16,689 | INFO     | extracted standard memory fields from prmon json
[2025-12-21 13:43:49] 2025-12-21 21:43:16,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-21 13:43:49] 2025-12-21 21:43:16,704 | INFO     | fitting pss+swap vs Time
[2025-12-21 13:43:49] 2025-12-21 21:43:16,705 | INFO     | sum of square deviations: 147716263499.86075
[2025-12-21 13:43:49] 2025-12-21 21:43:16,722 | INFO     | sum of deviations: 1231041265836.1362
[2025-12-21 13:43:49] 2025-12-21 21:43:16,722 | INFO     | mean x: 1766329568.7848911
[2025-12-21 13:43:49] 2025-12-21 21:43:16,722 | INFO     | mean y: 2936232.435339309
[2025-12-21 13:43:49] 2025-12-21 21:43:16,722 | INFO     | intersect: -14717342609.730194
[2025-12-21 13:43:49] 2025-12-21 21:43:16,723 | INFO     | chi2: 6.172943181714399
[2025-12-21 13:43:49] 2025-12-21 21:43:16,724 | INFO     | sum of square deviations: 144897495281.76093
[2025-12-21 13:43:49] 2025-12-21 21:43:16,741 | INFO     | sum of deviations: 1503646944049.0498
[2025-12-21 13:43:49] 2025-12-21 21:43:16,741 | INFO     | mean x: 1766329416.2899485
[2025-12-21 13:43:49] 2025-12-21 21:43:16,742 | INFO     | mean y: 2950980.506443299
[2025-12-21 13:43:49] 2025-12-21 21:43:16,742 | INFO     | intersect: -18326805678.32133
[2025-12-21 13:43:49] 2025-12-21 21:43:16,743 | INFO     | chi2: 2.9121594388067407
[2025-12-21 13:43:49] 2025-12-21 21:43:16,743 | INFO     | current chi2=2.9121594388067407 (change=52.823809436101875 %)
[2025-12-21 13:43:49] 2025-12-21 21:43:16,744 | INFO     | sum of square deviations: 142114820763.62128
[2025-12-21 13:43:49] 2025-12-21 21:43:16,761 | INFO     | sum of deviations: 1594371585689.7888
[2025-12-21 13:43:49] 2025-12-21 21:43:16,761 | INFO     | mean x: 1766329263.7950714
[2025-12-21 13:43:49] 2025-12-21 21:43:16,761 | INFO     | mean y: 2955947.2075226977
[2025-12-21 13:43:49] 2025-12-21 21:43:16,761 | INFO     | intersect: -19813310745.000244
[2025-12-21 13:43:49] 2025-12-21 21:43:16,762 | INFO     | chi2: 2.3896233543459706
[2025-12-21 13:43:49] 2025-12-21 21:43:16,762 | INFO     | current chi2=2.3896233543459706 (change=17.943251234722215 %)
[2025-12-21 13:43:49] 2025-12-21 21:43:16,762 | INFO     | right removable region: 770
[2025-12-21 13:43:49] 2025-12-21 21:43:16,763 | INFO     | sum of square deviations: 144897168749.3404
[2025-12-21 13:43:49] 2025-12-21 21:43:16,780 | INFO     | sum of deviations: 1012791403548.824
[2025-12-21 13:43:49] 2025-12-21 21:43:16,780 | INFO     | mean x: 1766329721.2886598
[2025-12-21 13:43:49] 2025-12-21 21:43:16,780 | INFO     | mean y: 2948019.7641752576
[2025-12-21 13:43:49] 2025-12-21 21:43:16,780 | INFO     | intersect: -12343211487.662973
[2025-12-21 13:43:49] 2025-12-21 21:43:16,781 | INFO     | chi2: 3.9449934112955516
[2025-12-21 13:43:49] 2025-12-21 21:43:16,781 | INFO     | current chi2=3.9449934112955516 (change=36.09218009682188 %)
[2025-12-21 13:43:49] 2025-12-21 21:43:16,782 | INFO     | sum of square deviations: 142114262615.9612
[2025-12-21 13:43:49] 2025-12-21 21:43:16,799 | INFO     | sum of deviations: 964506579846.6067
[2025-12-21 13:43:49] 2025-12-21 21:43:16,799 | INFO     | mean x: 1766329873.7898834
[2025-12-21 13:43:49] 2025-12-21 21:43:16,799 | INFO     | mean y: 2950664.744487678
[2025-12-21 13:43:49] 2025-12-21 21:43:16,799 | INFO     | intersect: -11984845310.763948
[2025-12-21 13:43:49] 2025-12-21 21:43:16,800 | INFO     | chi2: 3.9132826666401845
[2025-12-21 13:43:49] 2025-12-21 21:43:16,800 | INFO     | current chi2=3.9132826666401845 (change=0.8038224997935578 %)
[2025-12-21 13:43:49] 2025-12-21 21:43:16,800 | INFO     | left removable region: 20
[2025-12-21 13:43:49] 2025-12-21 21:43:16,801 | INFO     | sum of square deviations: 130815455530.68796
[2025-12-21 13:43:49] 2025-12-21 21:43:16,817 | INFO     | sum of deviations: 1275964654003.186
[2025-12-21 13:43:49] 2025-12-21 21:43:16,817 | INFO     | mean x: 1766329843.304
[2025-12-21 13:43:49] 2025-12-21 21:43:16,817 | INFO     | mean y: 2974692.7053333335
[2025-12-21 13:43:49] 2025-12-21 21:43:16,817 | INFO     | intersect: -17225681036.266827
[2025-12-21 13:43:49] 2025-12-21 21:43:16,818 | INFO     | chi2: 0.06008448679637672
[2025-12-21 13:43:49] 2025-12-21 21:43:16,818 | INFO     | current memory leak: 9.75 B/s (using 750 data points, chi2=0.06)
[2025-12-21 13:43:49] 2025-12-21 21:43:16,819 | INFO     | could have reported an average CPU frequency of 1993 MHz (30 samples)
[2025-12-21 13:43:49] 2025-12-21 21:43:16,819 | INFO     | ..............................
[2025-12-21 13:43:49] 2025-12-21 21:43:16,819 | INFO     | . Timing measurements:
[2025-12-21 13:43:49] 2025-12-21 21:43:16,820 | INFO     | . get job = 0 s
[2025-12-21 13:43:49] 2025-12-21 21:43:16,820 | INFO     | . initial setup = 3 s
[2025-12-21 13:43:49] 2025-12-21 21:43:16,820 | INFO     | . payload setup = 8 s
[2025-12-21 13:43:49] 2025-12-21 21:43:16,820 | INFO     | . stage-in = 0 s
[2025-12-21 13:43:49] 2025-12-21 21:43:16,820 | INFO     | . payload execution = 47602 s
[2025-12-21 13:43:49] 2025-12-21 21:43:16,820 | INFO     | . stage-out = 5 s
[2025-12-21 13:43:49] 2025-12-21 21:43:16,820 | INFO     | . log creation = 1 s
[2025-12-21 13:43:49] 2025-12-21 21:43:16,820 | INFO     | ..............................
[2025-12-21 13:43:49] 2025-12-21 21:43:17,096 | INFO     | 
[2025-12-21 13:43:49] 2025-12-21 21:43:17,097 | INFO     | job summary report
[2025-12-21 13:43:49] 2025-12-21 21:43:17,097 | INFO     | --------------------------------------------------
[2025-12-21 13:43:49] 2025-12-21 21:43:17,097 | INFO     | PanDA job id: 6937273786
[2025-12-21 13:43:49] 2025-12-21 21:43:17,097 | INFO     | task id: 47960988
[2025-12-21 13:43:49] 2025-12-21 21:43:17,097 | INFO     | errors: (none)
[2025-12-21 13:43:49] 2025-12-21 21:43:17,097 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-21 13:43:49] 2025-12-21 21:43:17,097 | INFO     | pilot state: finished 
[2025-12-21 13:43:49] 2025-12-21 21:43:17,097 | INFO     | transexitcode: 0
[2025-12-21 13:43:49] 2025-12-21 21:43:17,097 | INFO     | exeerrorcode: 0
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | exeerrordiag: 
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | exitcode: 0
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | exitmsg: OK
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | cpuconsumptiontime: 377414 s
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | nevents: 1000
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | neventsw: 0
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | pid: 1474499
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | pgrp: 1474499
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | corecount: 8
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | event service: False
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | sizes: {0: 2284602, 1: 2284602, 6: 2284892, 11: 2284920, 47614: 2331367, 47622: 2340559, 47633: 2340749}
[2025-12-21 13:43:49] 2025-12-21 21:43:17,098 | INFO     | --------------------------------------------------
[2025-12-21 13:43:49] 2025-12-21 21:43:17,099 | INFO     | 
[2025-12-21 13:43:49] 2025-12-21 21:43:17,099 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-12-21 13:43:49] 2025-12-21 21:43:17,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,129 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-21 13:43:49] 2025-12-21 21:43:17,129 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,129 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-21 13:43:49] 2025-12-21 21:43:17,130 | INFO     | job 6937273786 has completed (purged errors)
[2025-12-21 13:43:49] 2025-12-21 21:43:17,130 | INFO     | overall cleanup function is called
[2025-12-21 13:43:49] 2025-12-21 21:43:18,150 | INFO     | --- collectZombieJob: --- 10, [1474499]
[2025-12-21 13:43:49] 2025-12-21 21:43:18,151 | INFO     | zombie collector waiting for pid 1474499
[2025-12-21 13:43:49] 2025-12-21 21:43:18,151 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-21 13:43:49] 2025-12-21 21:43:18,151 | INFO     | collected zombie processes
[2025-12-21 13:43:49] 2025-12-21 21:43:18,151 | INFO     | will attempt to kill all subprocesses of pid=1474499
[2025-12-21 13:43:49] 2025-12-21 21:43:18,633 | INFO     | process IDs to be killed: [1474499] (in reverse order)
[2025-12-21 13:43:49] 2025-12-21 21:43:18,789 | WARNING  | found no corresponding commands to process id(s)
[2025-12-21 13:43:49] 2025-12-21 21:43:18,790 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-21 13:43:49] 2025-12-21 21:43:18,804 | INFO     | did not find any defunct processes belonging to 1474499
[2025-12-21 13:43:49] 2025-12-21 21:43:18,817 | INFO     | did not find any defunct processes belonging to 1474499
[2025-12-21 13:43:49] 2025-12-21 21:43:18,817 | INFO     | ready for new job
[2025-12-21 13:43:49] 2025-12-21 21:43:18,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-21 13:43:49] 2025-12-21 21:43:18,823 | INFO     | ***************************************
[2025-12-21 13:43:49] 2025-12-21 21:43:18,823 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-21 13:43:49] 2025-12-21 21:43:18,823 | INFO     | ***************************************
[2025-12-21 13:43:49] 2025-12-21 21:43:18,823 | INFO     | 
[2025-12-21 13:43:49] 2025-12-21 21:43:18,833 | INFO     | architecture information:
[2025-12-21 13:43:49] 2025-12-21 21:43:18,833 | INFO     | executing command: cat /etc/os-release
[2025-12-21 13:43:49] 2025-12-21 21:43:18,857 | INFO     | cat /etc/os-release:
[2025-12-21 13:43:49] NAME="CentOS Linux"
[2025-12-21 13:43:49] VERSION="7 (Core)"
[2025-12-21 13:43:49] ID="centos"
[2025-12-21 13:43:49] ID_LIKE="rhel fedora"
[2025-12-21 13:43:49] VERSION_ID="7"
[2025-12-21 13:43:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-21 13:43:49] ANSI_COLOR="0;31"
[2025-12-21 13:43:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-21 13:43:49] HOME_URL="https://www.centos.org/"
[2025-12-21 13:43:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-21 13:43:49] 
[2025-12-21 13:43:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-21 13:43:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-21 13:43:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-21 13:43:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-21 13:43:49] 
[2025-12-21 13:43:49] 2025-12-21 21:43:18,858 | INFO     | ***************************************
[2025-12-21 13:43:49] 2025-12-21 21:43:19,361 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-12-21 13:43:49] 2025-12-21 21:43:19,388 | INFO     | sufficient remaining disk space (374890037248 B)
[2025-12-21 13:43:49] 2025-12-21 21:43:19,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-21 13:43:49] 2025-12-21 21:43:19,389 | INFO     | current server update state: UPDATING_FINAL
[2025-12-21 13:43:49] 2025-12-21 21:43:19,389 | INFO     | update_server=False
[2025-12-21 13:43:49] 2025-12-21 21:43:19,389 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-21 13:43:49] 2025-12-21 21:43:19,487 | INFO     | all job control threads have been joined
[2025-12-21 13:43:49] 2025-12-21 21:43:19,549 | INFO     | all data control threads have been joined
[2025-12-21 13:43:49] 2025-12-21 21:43:19,870 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-21 13:43:49] 2025-12-21 21:43:19,871 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-21 13:43:49] 2025-12-21 21:43:19,871 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-21 13:43:49] 2025-12-21 21:43:19,871 | INFO     | will abort loop
[2025-12-21 13:43:49] 2025-12-21 21:43:19,970 | INFO     | all payload control threads have been joined
[2025-12-21 13:43:49] 2025-12-21 21:43:20,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-21 13:43:49] 2025-12-21 21:43:20,394 | INFO     | [job] retrieve thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:20,466 | INFO     | [payload] failed_post thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:20,492 | INFO     | [job] control thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:20,554 | INFO     | [data] control thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:20,564 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:20,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-21 13:43:49] 2025-12-21 21:43:20,758 | INFO     | [job] validate thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:20,876 | INFO     | [job] job monitor thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:20,975 | INFO     | [payload] control thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:21,135 | INFO     | [payload] validate_pre thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:21,349 | INFO     | [job] create_data_payload thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:21,523 | INFO     | [payload] execute_payloads thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:21,548 | INFO     | [data] copytool_in thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:21,551 | INFO     | [payload] validate_post thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:21,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-21 13:43:49] 2025-12-21 21:43:22,752 | INFO     | [data] copytool_out thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:22,914 | INFO     | [job] queue monitor thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:24,152 | INFO     | [monitor] cgroup control has ended
[2025-12-21 13:43:49] 2025-12-21 21:43:24,350 | INFO     | [data] queue_monitor thread has finished
[2025-12-21 13:43:49] 2025-12-21 21:43:24,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375356495680)>', '<ExcThread(monitor, started 140374798481152)>']
[2025-12-21 13:43:49] 2025-12-21 21:43:29,741 | INFO     | all workflow threads have been joined
[2025-12-21 13:43:49] 2025-12-21 21:43:29,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-21 13:43:49] 2025-12-21 21:43:29,742 | INFO     | traces error code: 0
[2025-12-21 13:43:49] 2025-12-21 21:43:29,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-21 13:43:49] 2025-12-21 21:43:49,272 | INFO     | PID=1467100 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-21 13:43:49] 2025-12-21 21:43:49,273 | INFO     | found 0 job(s) in 20 queues
[2025-12-21 13:43:49] 2025-12-21 21:43:49,274 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-21 13:43:49] 2025-12-21 21:43:49,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-21 13:43:49] 2025-12-21 21:43:49,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-21 13:43:49] 2025-12-21 21:43:49,274 | INFO     | [monitor] control thread has ended
[2025-12-21 13:43:49] 2025-12-21 21:43:49,426 [wrapper] ==== pilot stdout END ====
[2025-12-21 13:43:49] 2025-12-21 21:43:49,430 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-21 13:43:49] 2025-12-21 21:43:49,434 [wrapper] pilotpid: 1467100
[2025-12-21 13:43:49] 2025-12-21 21:43:49,437 [wrapper] Pilot exit status: 0
[2025-12-21 13:43:49] 2025-12-21 21:43:49,452 [wrapper] pandaids: 6937273786
[2025-12-21 13:43:49] 2025-12-21 21:43:49,557 [wrapper] cleanup supervisor_pilot 2131904 1467101
[2025-12-21 13:43:49] 2025-12-21 21:43:49,561 [wrapper] Test setup, not cleaning
[2025-12-21 13:43:49] 2025-12-21 21:43:49,565 [wrapper] apfmon messages muted
[2025-12-21 13:43:49] 2025-12-21 21:43:49,569 [wrapper] ==== wrapper stdout END ====
[2025-12-21 13:43:49] 2025-12-21 21:43:49,572 [wrapper] ==== wrapper stderr END ====
[2025-12-21 13:43:49]  *** Error codes and diagnostics ***
[2025-12-21 13:43:49]     "exeErrorCode": 0,
[2025-12-21 13:43:49]     "exeErrorDiag": "",
[2025-12-21 13:43:49]     "pilotErrorCode": 0,
[2025-12-21 13:43:49]     "pilotErrorDiag": "",
[2025-12-21 13:43:49]  *** Listing of results directory ***
[2025-12-21 13:43:49] total 1403596
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc     579449 Dec 19 21:05 pilot3.tar.gz
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc       5112 Dec 19 21:05 queuedata.json
[2025-12-21 13:43:49] -rwx------ 1 boinc boinc      36322 Dec 19 21:05 runpilot2-wrapper.sh
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc        100 Dec 21 00:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-21 13:43:49] -rwxr-xr-x 1 boinc boinc       7986 Dec 21 00:28 run_atlas
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc        105 Dec 21 00:28 job.xml
[2025-12-21 13:43:49] -rw-r--r-- 2 boinc boinc  415487861 Dec 21 00:28 EVNT.47960986._000012.pool.root.1
[2025-12-21 13:43:49] drwxrwx--x 2 boinc boinc       4096 Dec 21 00:28 shared
[2025-12-21 13:43:49] -rw-r--r-- 2 boinc boinc     592596 Dec 21 00:28 input.tar.gz
[2025-12-21 13:43:49] -rw-r--r-- 2 boinc boinc      15847 Dec 21 00:28 start_atlas.sh
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc          0 Dec 21 00:28 boinc_setup_complete
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc       9992 Dec 21 00:28 init_data.xml
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc          0 Dec 21 00:28 boinc_lockfile
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc       2874 Dec 21 00:28 pandaJob.out
[2025-12-21 13:43:49] -rw------- 1 boinc boinc     988154 Dec 21 00:29 agis_schedconf.cvmfs.json
[2025-12-21 13:43:49] drwx------ 5 boinc boinc       4096 Dec 21 00:29 pilot3
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc        532 Dec 21 13:31 boinc_task_state.xml
[2025-12-21 13:43:49] -rw------- 1 boinc boinc 1000665234 Dec 21 13:42 HITS.47960988._000831.pool.root.1
[2025-12-21 13:43:49] -rw------- 1 boinc boinc       1036 Dec 21 13:42 memory_monitor_summary.json
[2025-12-21 13:43:49] -rw------- 1 boinc boinc    1516240 Dec 21 13:43 agis_ddmendpoints.agis.ALL.json
[2025-12-21 13:43:49] -rw------- 1 boinc boinc    2013535 Dec 21 13:43 log.47960988._000831.job.log.tgz.1
[2025-12-21 13:43:49] -rw------- 1 boinc boinc       8556 Dec 21 13:43 heartbeat.json
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc       8192 Dec 21 13:43 boinc_mmap_file
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc         29 Dec 21 13:43 wrapper_checkpoint.txt
[2025-12-21 13:43:49] -rw------- 1 boinc boinc        747 Dec 21 13:43 pilotlog.txt
[2025-12-21 13:43:49] -rw------- 1 boinc boinc         95 Dec 21 13:43 pilot_heartbeat.json
[2025-12-21 13:43:49] -rw------- 1 boinc boinc    6591279 Dec 21 13:43 log.47960988._000831.job.log.1
[2025-12-21 13:43:49] -rw------- 1 boinc boinc        353 Dec 21 13:43 output.list
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc        620 Dec 21 13:43 runtime_log
[2025-12-21 13:43:49] -rw------- 1 boinc boinc    8622080 Dec 21 13:43 result.tar.gz
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc       8914 Dec 21 13:43 runtime_log.err
[2025-12-21 13:43:49] -rw------- 1 boinc boinc        662 Dec 21 13:43 rnoKDmuK4q8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqUcKDmXeeTEo.diag
[2025-12-21 13:43:49] -rw-r--r-- 1 boinc boinc      21337 Dec 21 13:43 stderr.txt
[2025-12-21 13:43:49] HITS file was successfully produced:
[2025-12-21 13:43:49] -rw------- 1 boinc boinc 1000665234 Dec 21 13:42 shared/HITS.pool.root.1
[2025-12-21 13:43:49]  *** Contents of shared directory: ***
[2025-12-21 13:43:49] total 1391992
[2025-12-21 13:43:49] -rw-r--r-- 2 boinc boinc  415487861 Dec 21 00:28 ATLAS.root_0
[2025-12-21 13:43:49] -rw-r--r-- 2 boinc boinc     592596 Dec 21 00:28 input.tar.gz
[2025-12-21 13:43:49] -rw-r--r-- 2 boinc boinc      15847 Dec 21 00:28 start_atlas.sh
[2025-12-21 13:43:49] -rw------- 1 boinc boinc 1000665234 Dec 21 13:42 HITS.pool.root.1
[2025-12-21 13:43:49] -rw------- 1 boinc boinc    8622080 Dec 21 13:43 result.tar.gz
13:43:51 (1462875): run_atlas exited; CPU time 378806.237105
13:43:51 (1462875): called boinc_finish(0)

</stderr_txt>
]]>

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