Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:21:51 (3672183): wrapper (7.7.26015): starting
16:21:51 (3672183): wrapper: running run_atlas (--nthreads 12)
[2025-12-20 16:21:51] Arguments: --nthreads 12
[2025-12-20 16:21:51] Threads: 12
[2025-12-20 16:21:51] Checking for CVMFS
[2025-12-20 16:21:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 16:21:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 16:21:53] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 16:21:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 16:21:55] 2.11.5.0 3810059 28450 354604 154243 3 69 34404990 45568000 18425 130560 0 158096175 99.838 84770940 19661 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-20 16:21:55] CVMFS is ok
[2025-12-20 16:21:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 16:21:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 16:21:55] Further information can be found at the LHC@home message board.
[2025-12-20 16:21:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 16:21:55] Checking for apptainer binary...
[2025-12-20 16:21:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 16:21:55] Running /usr/bin/apptainer --version
[2025-12-20 16:21:55] apptainer version 1.4.1-1.el9
[2025-12-20 16:21:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 16:21:56] wns0043.triumf.lcg
[2025-12-20 16:21:56] apptainer works
[2025-12-20 16:21:56] Set ATHENA_PROC_NUMBER=12
[2025-12-20 16:21:56] Set ATHENA_CORE_NUMBER=12
[2025-12-20 16:21:56] Starting ATLAS job with PandaID=6929309467
[2025-12-20 16:21:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 16:28:46]  *** The last 200 lines of the pilot log: ***
[2025-12-20 16:28:46] 2025-12-21 00:27:39,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | WARNING  | wrong length of table data, x=[1766276683.0], y=[1123.0] (must be same and length>=4)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | could have reported an average CPU frequency of 1321 MHz (4 samples)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | ..............................
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . Timing measurements:
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . get job = 0 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . initial setup = 4 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . payload setup = 26 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . stage-in = 0 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . payload execution = 76 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . stage-out = 1 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . log creation = 0 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | ..............................
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929309467/pilotlog.txt
[2025-12-20 16:28:46] 2025-12-21 00:27:39,442 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-20 16:28:46] - Log from pilotlog.txt -
[2025-12-20 16:28:46] 2025-12-21 00:27:39,402 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929309467/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,403 | INFO     | extracted standard info from prmon json
[2025-12-20 16:28:46] 2025-12-21 00:27:39,404 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 16:28:46] 2025-12-21 00:27:39,404 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 16:28:46] 2025-12-21 00:27:39,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-20 16:28:46] 2025-12-21 00:27:39,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | WARNING  | wrong length of table data, x=[1766276683.0], y=[1123.0] (must be same and length>=4)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | could have reported an average CPU frequency of 1321 MHz (4 samples)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | ..............................
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . Timing measurements:
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . get job = 0 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . initial setup = 4 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . payload setup = 26 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . stage-in = 0 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . payload execution = 76 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . stage-out = 1 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . log creation = 0 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | ..............................
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929309467/pilotlog.txt
[2025-12-20 16:28:46] 2025-12-21 00:27:39,443 | WARNING  | 
[2025-12-20 16:28:46] [begin log extracts]
[2025-12-20 16:28:46] - Log from pilotlog.txt -
[2025-12-20 16:28:46] 2025-12-21 00:27:39,402 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6929309467/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,403 | INFO     | extracted standard info from prmon json
[2025-12-20 16:28:46] 2025-12-21 00:27:39,404 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 16:28:46] 2025-12-21 00:27:39,404 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 16:28:46] 2025-12-21 00:27:39,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-20 16:28:46] 2025-12-21 00:27:39,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | WARNING  | wrong length of table data, x=[1766276683.0], y=[1123.0] (must be same and length>=4)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | could have reported an average CPU frequency of 1321 MHz (4 samples)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | ..............................
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . Timing measurements:
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . get job = 0 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . initial setup = 4 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,406 | INFO     | . payload setup = 26 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . stage-in = 0 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . payload execution = 76 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . stage-out = 1 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | . log creation = 0 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | ..............................
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 16:28:46] 2025-12-21 00:27:39,407 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6929309467/pilotlog.txt
[2025-12-20 16:28:46] [end log extracts]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,443 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,445 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-20 16:28:46] 2025-12-21 00:27:39,608 | INFO     | 
[2025-12-20 16:28:46] 2025-12-21 00:27:39,608 | INFO     | job summary report
[2025-12-20 16:28:46] 2025-12-21 00:27:39,608 | INFO     | --------------------------------------------------
[2025-12-20 16:28:46] 2025-12-21 00:27:39,609 | INFO     | PanDA job id: 6929309467
[2025-12-20 16:28:46] 2025-12-21 00:27:39,609 | INFO     | task id: 47886933
[2025-12-20 16:28:46] 2025-12-21 00:27:39,609 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-20 16:25:12,408 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-20 16:28:46] 2025-12-21 00:27:39,609 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-20 16:28:46] 2025-12-21 00:27:39,609 | INFO     | pilot state: failed 
[2025-12-20 16:28:46] 2025-12-21 00:27:39,609 | INFO     | transexitcode: 65
[2025-12-20 16:28:46] 2025-12-21 00:27:39,609 | INFO     | exeerrorcode: 65
[2025-12-20 16:28:46] 2025-12-21 00:27:39,610 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,610 | INFO     | exitcode: 65
[2025-12-20 16:28:46] 2025-12-21 00:27:39,610 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,610 | INFO     | cpuconsumptiontime: 31 s
[2025-12-20 16:28:46] 2025-12-21 00:27:39,610 | INFO     | nevents: 0
[2025-12-20 16:28:46] 2025-12-21 00:27:39,610 | INFO     | neventsw: 0
[2025-12-20 16:28:46] 2025-12-21 00:27:39,610 | INFO     | pid: 3684907
[2025-12-20 16:28:46] 2025-12-21 00:27:39,610 | INFO     | pgrp: 3684907
[2025-12-20 16:28:46] 2025-12-21 00:27:39,610 | INFO     | corecount: 12
[2025-12-20 16:28:46] 2025-12-21 00:27:39,610 | INFO     | event service: False
[2025-12-20 16:28:46] 2025-12-21 00:27:39,610 | INFO     | sizes: {0: 2283135, 1: 2283817, 2: 2284016, 3: 2284016, 14: 2284044, 26: 2284072, 35: 2284490, 36: 2284518, 107: 2307881, 108: 2307857, 111: 2312485, 244: 2312623}
[2025-12-20 16:28:46] 2025-12-21 00:27:39,611 | INFO     | --------------------------------------------------
[2025-12-20 16:28:46] 2025-12-21 00:27:39,611 | INFO     | 
[2025-12-20 16:28:46] 2025-12-21 00:27:39,611 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-20 16:28:46] 2025-12-21 00:27:39,668 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,669 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,669 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,669 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,669 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,669 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,670 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,670 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,670 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,670 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-20 16:28:46] 2025-12-21 00:27:39,681 | INFO     | job 6929309467 has completed (purged errors)
[2025-12-20 16:28:46] 2025-12-21 00:27:39,681 | INFO     | overall cleanup function is called
[2025-12-20 16:28:46] 2025-12-21 00:27:40,689 | INFO     | --- collectZombieJob: --- 10, [3684907]
[2025-12-20 16:28:46] 2025-12-21 00:27:40,689 | INFO     | zombie collector waiting for pid 3684907
[2025-12-20 16:28:46] 2025-12-21 00:27:40,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-20 16:28:46] 2025-12-21 00:27:40,689 | INFO     | collected zombie processes
[2025-12-20 16:28:46] 2025-12-21 00:27:40,689 | INFO     | will attempt to kill all subprocesses of pid=3684907
[2025-12-20 16:28:46] 2025-12-21 00:27:41,166 | INFO     | process IDs to be killed: [3684907] (in reverse order)
[2025-12-20 16:28:46] 2025-12-21 00:27:41,291 | WARNING  | found no corresponding commands to process id(s)
[2025-12-20 16:28:46] 2025-12-21 00:27:41,292 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-20 16:28:46] 2025-12-21 00:27:41,338 | INFO     | did not find any defunct processes belonging to 3684907
[2025-12-20 16:28:46] 2025-12-21 00:27:41,363 | INFO     | did not find any defunct processes belonging to 3684907
[2025-12-20 16:28:46] 2025-12-21 00:27:41,363 | INFO     | ready for new job
[2025-12-20 16:28:46] 2025-12-21 00:27:41,363 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-20 16:28:46] 2025-12-21 00:27:41,366 | INFO     | ***************************************
[2025-12-20 16:28:46] 2025-12-21 00:27:41,371 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-20 16:28:46] 2025-12-21 00:27:41,371 | INFO     | ***************************************
[2025-12-20 16:28:46] 2025-12-21 00:27:41,371 | INFO     | 
[2025-12-20 16:28:46] 2025-12-21 00:27:41,380 | INFO     | architecture information:
[2025-12-20 16:28:46] 2025-12-21 00:27:41,391 | INFO     | executing command: cat /etc/os-release
[2025-12-20 16:28:46] 2025-12-21 00:27:41,410 | INFO     | cat /etc/os-release:
[2025-12-20 16:28:46] NAME="CentOS Linux"
[2025-12-20 16:28:46] VERSION="7 (Core)"
[2025-12-20 16:28:46] ID="centos"
[2025-12-20 16:28:46] ID_LIKE="rhel fedora"
[2025-12-20 16:28:46] VERSION_ID="7"
[2025-12-20 16:28:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 16:28:46] ANSI_COLOR="0;31"
[2025-12-20 16:28:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 16:28:46] HOME_URL="https://www.centos.org/"
[2025-12-20 16:28:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 16:28:46] 
[2025-12-20 16:28:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 16:28:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 16:28:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 16:28:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 16:28:46] 
[2025-12-20 16:28:46] 2025-12-21 00:27:41,411 | INFO     | ***************************************
[2025-12-20 16:28:46] 2025-12-21 00:27:41,914 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-20 16:28:46] 2025-12-21 00:27:41,995 | INFO     | sufficient remaining disk space (1974799958016 B)
[2025-12-20 16:28:46] 2025-12-21 00:27:41,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 16:28:46] 2025-12-21 00:27:41,995 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 16:28:46] 2025-12-21 00:27:41,995 | INFO     | update_server=False
[2025-12-20 16:28:46] 2025-12-21 00:27:41,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 16:28:46] 2025-12-21 00:27:42,110 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-20 16:28:46] 2025-12-21 00:27:42,110 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-20 16:28:46] 2025-12-21 00:27:42,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 16:28:46] 2025-12-21 00:27:42,110 | INFO     | will abort loop
[2025-12-20 16:28:46] 2025-12-21 00:27:42,572 | INFO     | all data control threads have been joined
[2025-12-20 16:28:46] 2025-12-21 00:27:42,686 | INFO     | all job control threads have been joined
[2025-12-20 16:28:46] 2025-12-21 00:27:42,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 16:28:46] 2025-12-21 00:27:43,001 | INFO     | [job] retrieve thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:43,116 | INFO     | [job] job monitor thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:43,125 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:43,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:43,419 | INFO     | [job] validate thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:43,490 | INFO     | all payload control threads have been joined
[2025-12-20 16:28:46] 2025-12-21 00:27:43,578 | INFO     | [data] control thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:43,691 | INFO     | [job] control thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:43,893 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 16:28:46] 2025-12-21 00:27:43,898 | INFO     | [payload] failed_post thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:44,177 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:44,254 | INFO     | [payload] validate_post thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:44,282 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:44,350 | INFO     | [data] copytool_in thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:44,496 | INFO     | [payload] control thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:44,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 16:28:46] 2025-12-21 00:27:44,765 | INFO     | [data] copytool_out thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:45,628 | INFO     | [job] queue monitor thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:27:47,909 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 16:28:46] 2025-12-21 00:28:11,624 | INFO     | PID=3678185 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-20 16:28:46] 2025-12-21 00:28:11,625 | INFO     | .. there are 21 such processes running
[2025-12-20 16:28:46] 2025-12-21 00:28:11,627 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 16:28:46] 2025-12-21 00:28:11,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 16:28:46] 2025-12-21 00:28:11,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 16:28:46] 2025-12-21 00:28:40,148 | INFO     | [monitor] cgroup control has ended
[2025-12-20 16:28:46] 2025-12-21 00:28:40,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605356603200)>', '<ExcThread(monitor, started 140605036402432)>']
[2025-12-20 16:28:46] 2025-12-21 00:28:40,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 16:28:46] 2025-12-21 00:28:40,816 | INFO     | [monitor] control thread has ended
[2025-12-20 16:28:46] 2025-12-21 00:28:45,657 | INFO     | all workflow threads have been joined
[2025-12-20 16:28:46] 2025-12-21 00:28:45,657 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 16:28:46] 2025-12-21 00:28:45,658 | INFO     | traces error code: 0
[2025-12-20 16:28:46] 2025-12-21 00:28:45,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 16:28:46] 2025-12-21 00:28:45,841 [wrapper] ==== pilot stdout END ====
[2025-12-20 16:28:46] 2025-12-21 00:28:45,846 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 16:28:46] 2025-12-21 00:28:45,850 [wrapper] pilotpid: 3678185
[2025-12-20 16:28:46] 2025-12-21 00:28:45,855 [wrapper] Pilot exit status: 0
[2025-12-20 16:28:46] 2025-12-21 00:28:45,873 [wrapper] pandaids: 6929309467
[2025-12-20 16:28:46] 2025-12-21 00:28:45,981 [wrapper] cleanup supervisor_pilot 3678191 3678186
[2025-12-20 16:28:46] 2025-12-21 00:28:45,987 [wrapper] Test setup, not cleaning
[2025-12-20 16:28:46] 2025-12-21 00:28:45,990 [wrapper] apfmon messages muted
[2025-12-20 16:28:46] 2025-12-21 00:28:46,018 [wrapper] ==== wrapper stdout END ====
[2025-12-20 16:28:46] 2025-12-21 00:28:46,047 [wrapper] ==== wrapper stderr END ====
[2025-12-20 16:28:46]  *** Error codes and diagnostics ***
[2025-12-20 16:28:46]     "exeErrorCode": 65,
[2025-12-20 16:28:46]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-12-20 16:28:46]     "pilotErrorCode": 1305,
[2025-12-20 16:28:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-12-20 16:28:46]  *** Listing of results directory ***
[2025-12-20 16:28:46] total 192432
[2025-12-20 16:28:46] -rwx------. 1 boinc boinc     36322 Dec 13 03:39 runpilot2-wrapper.sh
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc    579449 Dec 13 03:43 pilot3.tar.gz
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc      5112 Dec 13 03:43 queuedata.json
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc       100 Dec 20 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 16:28:46] -rwxr-xr-x. 1 boinc boinc      7986 Dec 20 16:21 run_atlas
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc       105 Dec 20 16:21 job.xml
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc      6596 Dec 20 16:21 init_data.xml
[2025-12-20 16:28:46] -rw-r--r--. 2 boinc boinc 192904414 Dec 20 16:21 EVNT.47886929._000083.pool.root.1
[2025-12-20 16:28:46] -rw-r--r--. 2 boinc boinc     15847 Dec 20 16:21 start_atlas.sh
[2025-12-20 16:28:46] drwxrwx--x. 2 boinc boinc      4096 Dec 20 16:21 shared
[2025-12-20 16:28:46] -rw-r--r--. 2 boinc boinc    592398 Dec 20 16:21 input.tar.gz
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc         0 Dec 20 16:21 boinc_lockfile
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc      2512 Dec 20 16:21 pandaJob.out
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc    988154 Dec 20 16:22 agis_schedconf.cvmfs.json
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc   1516240 Dec 20 16:22 agis_ddmendpoints.agis.ALL.json
[2025-12-20 16:28:46] drwx------. 5 boinc boinc      4096 Dec 20 16:22 pilot3
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc       525 Dec 20 16:25 boinc_task_state.xml
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc       978 Dec 20 16:25 memory_monitor_summary.json
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc     22183 Dec 20 16:25 log.47886933._002079.job.log.tgz.1
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc      8390 Dec 20 16:27 heartbeat.json
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc        95 Dec 20 16:28 pilot_heartbeat.json
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc      8192 Dec 20 16:28 boinc_mmap_file
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc        23 Dec 20 16:28 wrapper_checkpoint.txt
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc      5009 Dec 20 16:28 pilotlog.txt
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc     95760 Dec 20 16:28 log.47886933._002079.job.log.1
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc       188 Dec 20 16:28 output.list
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc       620 Dec 20 16:28 runtime_log
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc    133120 Dec 20 16:28 result.tar.gz
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc       646 Dec 20 16:28 S9uNDm88co8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrQTKDmKKSsSo.diag
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc      8636 Dec 20 16:28 runtime_log.err
[2025-12-20 16:28:46] -rw-r--r--. 1 boinc boinc     21874 Dec 20 16:28 stderr.txt
[2025-12-20 16:28:46] No HITS result produced
[2025-12-20 16:28:46]  *** Contents of shared directory: ***
[2025-12-20 16:28:46] total 189116
[2025-12-20 16:28:46] -rw-r--r--. 2 boinc boinc 192904414 Dec 20 16:21 ATLAS.root_0
[2025-12-20 16:28:46] -rw-r--r--. 2 boinc boinc     15847 Dec 20 16:21 start_atlas.sh
[2025-12-20 16:28:46] -rw-r--r--. 2 boinc boinc    592398 Dec 20 16:21 input.tar.gz
[2025-12-20 16:28:46] -rw-------. 1 boinc boinc    133120 Dec 20 16:28 result.tar.gz
16:28:47 (3672183): run_atlas exited; CPU time 44.034688
16:28:47 (3672183): called boinc_finish(0)

</stderr_txt>
]]>

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