Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:38:30 (4088408): wrapper (7.7.26015): starting
01:38:30 (4088408): wrapper: running run_atlas (--nthreads 4)
[2025-12-22 01:38:30] Arguments: --nthreads 4
[2025-12-22 01:38:30] Threads: 4
[2025-12-22 01:38:30] Checking for CVMFS
[2025-12-22 01:38:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-22 01:38:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-22 01:38:30] Running cvmfs_config stat atlas.cern.ch
[2025-12-22 01:38:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-22 01:38:30] 2.9.2.0 3711072 1528 88132 154279 3 57 20687541 36864000 0 130560 0 828220 99.987 55690 6121 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-22 01:38:30] CVMFS is ok
[2025-12-22 01:38:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-22 01:38:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-22 01:38:30] Further information can be found at the LHC@home message board.
[2025-12-22 01:38:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-22 01:38:30] Checking for apptainer binary...
[2025-12-22 01:38:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-22 01:38:30] Running /usr/bin/apptainer --version
[2025-12-22 01:38:30] apptainer version 1.4.1-1.1
[2025-12-22 01:38:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-22 01:38:30] thA309
[2025-12-22 01:38:30] apptainer works
[2025-12-22 01:38:30] Set ATHENA_PROC_NUMBER=4
[2025-12-22 01:38:30] Set ATHENA_CORE_NUMBER=4
[2025-12-22 01:38:30] Starting ATLAS job with PandaID=6929021623
[2025-12-22 01:38:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 03:19:06]  *** The last 200 lines of the pilot log: ***
[2025-12-22 03:19:06] 2025-12-22 02:18:34,937 | WARNING  | found no corresponding commands to process id(s)
[2025-12-22 03:19:06] 2025-12-22 02:18:34,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-22 03:19:06] 2025-12-22 02:18:34,939 | INFO     | did not find any defunct processes belonging to 4098768
[2025-12-22 03:19:06] 2025-12-22 02:18:34,941 | INFO     | did not find any defunct processes belonging to 4098768
[2025-12-22 03:19:06] 2025-12-22 02:18:34,941 | INFO     | ready for new job
[2025-12-22 03:19:06] 2025-12-22 02:18:34,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-22 03:19:06] 2025-12-22 02:18:34,942 | INFO     | ***************************************
[2025-12-22 03:19:06] 2025-12-22 02:18:34,942 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-22 03:19:06] 2025-12-22 02:18:34,942 | INFO     | ***************************************
[2025-12-22 03:19:06] 2025-12-22 02:18:34,942 | INFO     | 
[2025-12-22 03:19:06] 2025-12-22 02:18:34,942 | INFO     | architecture information:
[2025-12-22 03:19:06] 2025-12-22 02:18:34,942 | INFO     | executing command: cat /etc/os-release
[2025-12-22 03:19:06] 2025-12-22 02:18:34,957 | INFO     | cat /etc/os-release:
[2025-12-22 03:19:06] NAME="CentOS Linux"
[2025-12-22 03:19:06] VERSION="7 (Core)"
[2025-12-22 03:19:06] ID="centos"
[2025-12-22 03:19:06] ID_LIKE="rhel fedora"
[2025-12-22 03:19:06] VERSION_ID="7"
[2025-12-22 03:19:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 03:19:06] ANSI_COLOR="0;31"
[2025-12-22 03:19:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 03:19:06] HOME_URL="https://www.centos.org/"
[2025-12-22 03:19:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 03:19:06] 
[2025-12-22 03:19:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 03:19:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 03:19:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 03:19:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 03:19:06] 
[2025-12-22 03:19:06] 2025-12-22 02:18:34,957 | INFO     | ***************************************
[2025-12-22 03:19:06] 2025-12-22 02:18:35,461 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-22 03:19:06] 2025-12-22 02:18:35,480 | INFO     | sufficient remaining disk space (240796041216 B)
[2025-12-22 03:19:06] 2025-12-22 02:18:35,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 03:19:06] 2025-12-22 02:18:35,481 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 03:19:06] 2025-12-22 02:18:35,481 | INFO     | update_server=False
[2025-12-22 03:19:06] 2025-12-22 02:18:35,481 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 03:19:06] 2025-12-22 02:18:35,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 03:19:06] 2025-12-22 02:18:35,481 | INFO     | aborting loop
[2025-12-22 03:19:06] 2025-12-22 02:18:35,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 03:19:06] 2025-12-22 02:18:35,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 03:19:06] 2025-12-22 02:18:36,102 | INFO     | all data control threads have been joined
[2025-12-22 03:19:06] 2025-12-22 02:18:36,153 | INFO     | all payload control threads have been joined
[2025-12-22 03:19:06] 2025-12-22 02:18:36,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 03:19:06] 2025-12-22 02:18:36,486 | INFO     | [job] retrieve thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:36,487 | INFO     | [job] job monitor thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:36,487 | INFO     | [job] queue monitor thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:36,607 | INFO     | all job control threads have been joined
[2025-12-22 03:19:06] 2025-12-22 02:18:36,661 | INFO     | [data] copytool_in thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:37,108 | INFO     | [data] control thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:37,159 | INFO     | [payload] control thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:37,224 | INFO     | [payload] failed_post thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:37,375 | INFO     | [job] validate thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:37,428 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:37,486 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:37,586 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:37,613 | INFO     | [job] control thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:37,873 | INFO     | [data] copytool_out thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:38,071 | INFO     | [payload] validate_post thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:40,204 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:45,672 | INFO     | [monitor] cgroup control has ended
[2025-12-22 03:19:06] 2025-12-22 02:18:46,088 | INFO     | job.realtimelogging is not enabled
[2025-12-22 03:19:06] 2025-12-22 02:18:47,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 03:19:06] 2025-12-22 02:18:49,192 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662334629696)>', '<ExcThread(monitor, started 140661252683520)>']
[2025-12-22 03:19:06] 2025-12-22 02:18:54,217 | INFO     | all workflow threads have been joined
[2025-12-22 03:19:06] 2025-12-22 02:18:54,218 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 03:19:06] 2025-12-22 02:18:54,219 | INFO     | traces error code: 0
[2025-12-22 03:19:06] 2025-12-22 02:18:54,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 03:19:06] 2025-12-22 02:19:05,909 | INFO     | PID=4092193 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-22 03:19:06] 2025-12-22 02:19:05,909 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 03:19:06] 2025-12-22 02:19:05,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 03:19:06] 2025-12-22 02:19:05,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 03:19:06] 2025-12-22 02:19:05,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 03:19:06] 2025-12-22 02:19:05,909 | INFO     | [monitor] control thread has ended
[2025-12-22 03:19:06] 2025-12-22 02:19:05,989 [wrapper] ==== pilot stdout END ====
[2025-12-22 03:19:06] 2025-12-22 02:19:05,993 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 03:19:06] 2025-12-22 02:19:05,997 [wrapper] pilotpid: 4092193
[2025-12-22 03:19:06] 2025-12-22 02:19:06,001 [wrapper] Pilot exit status: 0
[2025-12-22 03:19:06] 2025-12-22 02:19:06,013 [wrapper] pandaids: 6929021623
[2025-12-22 03:19:06] 2025-12-22 02:19:06,036 [wrapper] cleanup supervisor_pilot 4114385 4092194
[2025-12-22 03:19:06] 2025-12-22 02:19:06,040 [wrapper] Test setup, not cleaning
[2025-12-22 03:19:06] 2025-12-22 02:19:06,044 [wrapper] apfmon messages muted
[2025-12-22 03:19:06] 2025-12-22 02:19:06,048 [wrapper] ==== wrapper stdout END ====
[2025-12-22 03:19:06] 2025-12-22 02:19:06,052 [wrapper] ==== wrapper stderr END ====
[2025-12-22 03:19:06]  *** Error codes and diagnostics ***
[2025-12-22 03:19:06]     "exeErrorCode": 0,
[2025-12-22 03:19:06]     "exeErrorDiag": "",
[2025-12-22 03:19:06]     "pilotErrorCode": 0,
[2025-12-22 03:19:06]     "pilotErrorDiag": "",
[2025-12-22 03:19:06]  *** Listing of results directory ***
[2025-12-22 03:19:06] total 414696
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc    579449 Dec 13 06:46 pilot3.tar.gz
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc      5112 Dec 13 07:02 queuedata.json
[2025-12-22 03:19:06] -rwx------ 1 boinc boinc     36322 Dec 13 07:03 runpilot2-wrapper.sh
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc       100 Dec 22 01:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 03:19:06] -rwxr-xr-x 1 boinc boinc      7986 Dec 22 01:38 run_atlas
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc       105 Dec 22 01:38 job.xml
[2025-12-22 03:19:06] -rw-r--r-- 2 boinc boinc 213033836 Dec 22 01:38 EVNT.47898779._000066.pool.root.1
[2025-12-22 03:19:06] drwxrwx--x 2 boinc boinc      4096 Dec 22 01:38 shared
[2025-12-22 03:19:06] -rw-r--r-- 2 boinc boinc    592387 Dec 22 01:38 input.tar.gz
[2025-12-22 03:19:06] -rw-r--r-- 2 boinc boinc     15847 Dec 22 01:38 start_atlas.sh
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc         0 Dec 22 01:38 boinc_setup_complete
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc      6377 Dec 22 01:38 init_data.xml
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc         0 Dec 22 01:38 boinc_lockfile
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc      2521 Dec 22 01:38 pandaJob.out
[2025-12-22 03:19:06] -rw------- 1 boinc boinc    988254 Dec 22 01:38 agis_schedconf.cvmfs.json
[2025-12-22 03:19:06] -rw------- 1 boinc boinc   1516240 Dec 22 01:38 agis_ddmendpoints.agis.ALL.json
[2025-12-22 03:19:06] drwx------ 5 boinc boinc      4096 Dec 22 01:38 pilot3
[2025-12-22 03:19:06] -rw------- 1 boinc boinc 205414686 Dec 22 03:18 HITS.47898782._001133.pool.root.1
[2025-12-22 03:19:06] -rw------- 1 boinc boinc        95 Dec 22 03:18 pilot_heartbeat.json
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc       529 Dec 22 03:18 boinc_task_state.xml
[2025-12-22 03:19:06] -rw------- 1 boinc boinc      1018 Dec 22 03:18 memory_monitor_summary.json
[2025-12-22 03:19:06] -rw------- 1 boinc boinc    278541 Dec 22 03:18 log.47898782._001133.job.log.tgz.1
[2025-12-22 03:19:06] -rw------- 1 boinc boinc      7757 Dec 22 03:18 heartbeat.json
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc        27 Dec 22 03:18 wrapper_checkpoint.txt
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc      8192 Dec 22 03:18 boinc_mmap_file
[2025-12-22 03:19:06] -rw------- 1 boinc boinc       747 Dec 22 03:19 pilotlog.txt
[2025-12-22 03:19:06] -rw------- 1 boinc boinc    868621 Dec 22 03:19 log.47898782._001133.job.log.1
[2025-12-22 03:19:06] -rw------- 1 boinc boinc       357 Dec 22 03:19 output.list
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc       620 Dec 22 03:19 runtime_log
[2025-12-22 03:19:06] -rw------- 1 boinc boinc   1167360 Dec 22 03:19 result.tar.gz
[2025-12-22 03:19:06] -rw------- 1 boinc boinc       659 Dec 22 03:19 yJsLDmUuXo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmouRKDmKMO1dm.diag
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc      8897 Dec 22 03:19 runtime_log.err
[2025-12-22 03:19:06] -rw-r--r-- 1 boinc boinc     10062 Dec 22 03:19 stderr.txt
[2025-12-22 03:19:06] HITS file was successfully produced:
[2025-12-22 03:19:06] -rw------- 1 boinc boinc 205414686 Dec 22 03:18 shared/HITS.pool.root.1
[2025-12-22 03:19:06]  *** Contents of shared directory: ***
[2025-12-22 03:19:06] total 410392
[2025-12-22 03:19:06] -rw-r--r-- 2 boinc boinc 213033836 Dec 22 01:38 ATLAS.root_0
[2025-12-22 03:19:06] -rw-r--r-- 2 boinc boinc    592387 Dec 22 01:38 input.tar.gz
[2025-12-22 03:19:06] -rw-r--r-- 2 boinc boinc     15847 Dec 22 01:38 start_atlas.sh
[2025-12-22 03:19:06] -rw------- 1 boinc boinc 205414686 Dec 22 03:18 HITS.pool.root.1
[2025-12-22 03:19:06] -rw------- 1 boinc boinc   1167360 Dec 22 03:19 result.tar.gz
03:19:07 (4088408): run_atlas exited; CPU time 22875.341484
03:19:07 (4088408): called boinc_finish(0)

</stderr_txt>
]]>

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