Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-21 21:40:35 (31200): vboxwrapper version 26210
2025-12-21 21:40:35 (31200): BOINC client version: 8.2.4
2025-12-21 21:40:35 (31200): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-12-21 21:40:35 (31200): Successfully copied 'init_data.xml' to the shared directory.
2025-12-21 21:40:36 (31200): Create VM. (boinc_0d264c22c4164437, slot#0)
2025-12-21 21:40:36 (31200): Setting Memory Size for VM. (4800MB)
2025-12-21 21:40:36 (31200): Setting CPU Count for VM. (8)
2025-12-21 21:40:37 (31200): Setting Chipset Options for VM.
2025-12-21 21:40:37 (31200): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-21 21:40:37 (31200): Setting Boot Options for VM.
2025-12-21 21:40:38 (31200): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-21 21:40:38 (31200): Enabling VM Network Access.
2025-12-21 21:40:38 (31200): Disabling USB Support for VM.
2025-12-21 21:40:39 (31200): Disabling COM Port Support for VM.
2025-12-21 21:40:39 (31200): Disabling LPT Port Support for VM.
2025-12-21 21:40:39 (31200): Disabling Audio Support for VM.
2025-12-21 21:40:39 (31200): Disabling Clipboard Support for VM.
2025-12-21 21:40:40 (31200): Disabling Drag and Drop Support for VM.
2025-12-21 21:40:40 (31200): Adding storage controller(s) to VM.
2025-12-21 21:40:40 (31200): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-21 21:40:41 (31200): Adding VirtualBox Guest Additions to VM.
2025-12-21 21:40:41 (31200): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-21 21:40:41 (31200): forwarding host port 63060 to guest port 80
2025-12-21 21:40:41 (31200): Enabling remote desktop for VM.
2025-12-21 21:40:42 (31200): Enabling shared directory for VM.
2025-12-21 21:40:43 (31200): Starting VM using VBoxManage interface. (boinc_0d264c22c4164437, slot#0)
2025-12-21 21:40:48 (31200): Successfully started VM. (PID = '30756')
2025-12-21 21:40:48 (31200): Reporting VM Process ID to BOINC.
2025-12-21 21:40:48 (31200): Guest Log: BIOS: VirtualBox 7.1.4
2025-12-21 21:40:48 (31200): Guest Log: CPUID EDX: 0x178bfbff
2025-12-21 21:40:48 (31200): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-21 21:40:48 (31200): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-21 21:40:48 (31200): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-21 21:40:48 (31200): Detected: Web Application Enabled (http://localhost:63060)
2025-12-21 21:40:48 (31200): Detected: Remote Desktop Enabled (localhost:63061)
2025-12-21 21:40:48 (31200): Preference change detected
2025-12-21 21:40:48 (31200): Setting CPU throttle for VM. (100%)
2025-12-21 21:40:48 (31200): Setting network throttle for VM. (1024KB)
2025-12-21 21:40:49 (31200): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-21 21:40:50 (31200): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-21 21:40:50 (31200): Guest Log: BIOS: Booting from Hard Disk...
2025-12-21 21:40:53 (31200): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-21 21:40:53 (31200): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-21 21:40:53 (31200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-21 21:40:57 (31200): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-21 21:40:57 (31200): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-21 21:41:03 (31200): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-21 21:41:03 (31200): Guest Log: 00:00:00.000173 main     Log opened 2025-12-21T21:41:01.167928000Z
2025-12-21 21:41:03 (31200): Guest Log: 00:00:00.000302 main     OS Product: Linux
2025-12-21 21:41:03 (31200): Guest Log: 00:00:00.000342 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-21 21:41:03 (31200): Guest Log: 00:00:00.000377 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-21 21:41:03 (31200): Guest Log: 00:00:00.000414 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-21 21:41:03 (31200): Guest Log: 00:00:00.000415 main     Process ID: 1380
2025-12-21 21:41:03 (31200): Guest Log: 00:00:00.000416 main     Package type: LINUX_64BITS_GENERIC
2025-12-21 21:41:03 (31200): Guest Log: 00:00:00.001440 main     5.2.32 r132073 started. Verbose level = 0
2025-12-21 21:41:03 (31200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-21 21:41:03 (31200): Guest Log: [INFO] Mounting shared directory
2025-12-21 21:41:03 (31200): Guest Log: [INFO] Checking for init_data.xml
2025-12-21 21:41:08 (31200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-21 21:41:08 (31200): Guest Log: [INFO] Detected branch: prod
2025-12-21 21:41:08 (31200): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-21 21:41:08 (31200): Guest Log: Copying input files
2025-12-21 21:41:10 (31200): Guest Log: Copied input files into RunAtlas.
2025-12-21 21:41:10 (31200): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.3:3128 - will set in /etc/cvmfs/default.local
2025-12-21 21:41:13 (31200): Guest Log: 00:00:10.010791 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 995 027 000ns (GuestNow=1 766 371 273 167 759 000 ns GuestLast=1 766 353 261 172 732 000 ns fSetTimeLastLoop=true )
2025-12-21 21:41:19 (31200): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-21 21:41:20 (31200): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-21 21:41:20 (31200): Guest Log: 2.6.3.0 1687 0 31632 154281 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.3:3128 1
2025-12-21 21:41:20 (31200): Guest Log: copied the webapp to /var/www
2025-12-21 21:41:20 (31200): Guest Log: ATHENA_PROC_NUMBER=8
2025-12-21 21:41:20 (31200): Guest Log: ATHENA_CORE_NUMBER=8
2025-12-21 21:41:20 (31200): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-21 21:41:20 (31200): Guest Log:  *** Starting ATLAS job. (PandaID=6937273858 taskID=47960988) ***
2025-12-21 23:20:51 (31200): Status Report: Elapsed Time: '6000.000000'
2025-12-21 23:20:51 (31200): Status Report: CPU Time: '44785.046875'
2025-12-22 01:00:54 (31200): Status Report: Elapsed Time: '12000.000000'
2025-12-22 01:00:54 (31200): Status Report: CPU Time: '92445.515625'
2025-12-22 02:40:56 (31200): Status Report: Elapsed Time: '18000.000000'
2025-12-22 02:40:56 (31200): Status Report: CPU Time: '140067.250000'
2025-12-22 04:20:59 (31200): Status Report: Elapsed Time: '24000.000000'
2025-12-22 04:20:59 (31200): Status Report: CPU Time: '187717.687500'
2025-12-22 06:01:02 (31200): Status Report: Elapsed Time: '30000.000000'
2025-12-22 06:01:02 (31200): Status Report: CPU Time: '235316.640625'
2025-12-22 06:11:55 (31200): Guest Log:  *** Job finished ***
2025-12-22 06:11:55 (31200): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:25,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:25,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:35,867 | INFO     | [monitor] cgroup control has ended
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:35,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514773862208)>', '<ExcThread(monitor, started 140514183591680)>']
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:36,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:36,528 | INFO     | [monitor] control thread has ended
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:40,967 | INFO     | all workflow threads have been joined
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:40,968 | INFO     | end of generic workflow (traces error code: 0)
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:40,968 | INFO     | traces error code: 0
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:40,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:41,074 [wrapper] ==== pilot stdout END ====
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:41,082 [wrapper] ==== wrapper stdout RESUME ====
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:41,090 [wrapper] pilotpid: 6110
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:41,098 [wrapper] Pilot exit status: 0
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:41,122 [wrapper] pandaids: 6937273858
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:41,163 [wrapper] cleanup supervisor_pilot  8147 6111
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:41,171 [wrapper] Test setup, not cleaning
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:41,179 [wrapper] apfmon messages muted
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:41,186 [wrapper] ==== wrapper stdout END ====
2025-12-22 06:11:55 (31200): Guest Log: 2025-12-22 11:11:41,194 [wrapper] ==== wrapper stderr END ====
2025-12-22 06:11:55 (31200): Guest Log:  *** Error codes and diagnostics ***
2025-12-22 06:11:55 (31200): Guest Log:     "exeErrorCode": 0,
2025-12-22 06:11:55 (31200): Guest Log:     "exeErrorDiag": "",
2025-12-22 06:11:55 (31200): Guest Log:     "pilotErrorCode": 0,
2025-12-22 06:11:55 (31200): Guest Log:     "pilotErrorDiag": "",
2025-12-22 06:11:55 (31200): Guest Log:  *** Listing of results directory ***
2025-12-22 06:11:55 (31200): Guest Log: total 1002908
2025-12-22 06:11:55 (31200): Guest Log: -rw-r--r--. 1 atlas atlas     579449 Dec 20 05:05 pilot3.tar.gz
2025-12-22 06:11:55 (31200): Guest Log: -rwx------. 1 atlas atlas      36322 Dec 20 05:08 runpilot2-wrapper.sh
2025-12-22 06:11:55 (31200): Guest Log: -rw-r--r--. 1 atlas atlas       5112 Dec 20 05:12 queuedata.json
2025-12-22 06:11:55 (31200): Guest Log: -rwxr-xr-x. 1 atlas atlas      15847 Dec 22 02:41 start_atlas.sh
2025-12-22 06:11:55 (31200): Guest Log: -rwxr-xr-x. 1 atlas atlas     592604 Dec 22 02:41 input.tar.gz
2025-12-22 06:11:55 (31200): Guest Log: -rwxr-xr-x. 1 atlas atlas       9295 Dec 22 02:41 init_data.xml
2025-12-22 06:11:55 (31200): Guest Log: lrwxrwxrwx. 1 atlas atlas         20 Dec 22 02:41 EVNT.47960986._000017.pool.root.1 -> /data/./ATLAS.root_0
2025-12-22 06:11:55 (31200): Guest Log: -rw-r--r--. 1 atlas atlas       2877 Dec 22 02:41 pandaJob.out
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas         48 Dec 22 02:41 setup.sh.local
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas     988238 Dec 22 02:41 agis_schedconf.cvmfs.json
2025-12-22 06:11:55 (31200): Guest Log: drwx------. 5 atlas atlas       4096 Dec 22 02:42 pilot3
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas 1011496900 Dec 22 11:10 HITS.47960988._000884.pool.root.1
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas       1048 Dec 22 11:10 memory_monitor_summary.json
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas    1516240 Dec 22 11:10 agis_ddmendpoints.agis.ALL.json
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas    1780470 Dec 22 11:10 log.47960988._000884.job.log.tgz.1
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas       8637 Dec 22 11:10 heartbeat.json
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas         95 Dec 22 11:11 pilot_heartbeat.json
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas       5063 Dec 22 11:11 pilotlog.txt
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas    4033375 Dec 22 11:11 log.47960988._000884.job.log.1
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas        353 Dec 22 11:11 output.list
2025-12-22 06:11:55 (31200): Guest Log: -rw-r--r--. 1 atlas atlas        620 Dec 22 11:11 runtime_log
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas    5836800 Dec 22 11:11 result.tar.gz
2025-12-22 06:11:55 (31200): Guest Log: -rw-r--r--. 1 atlas atlas       9222 Dec 22 11:11 runtime_log.err
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas        664 Dec 22 11:11 oKIKDmpN4q8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAhcKDmmB9ifm.diag
2025-12-22 06:11:55 (31200): Guest Log: Looking for outputfile HITS.47960988._000884.pool.root.1
2025-12-22 06:11:55 (31200): Guest Log: HITS file was successfully produced
2025-12-22 06:11:55 (31200): Guest Log: -rw-------. 1 atlas atlas 1011496900 Dec 22 11:10 /home/atlas/RunAtlas/HITS.47960988._000884.pool.root.1
2025-12-22 06:12:00 (31200): Guest Log: Successfully finished the ATLAS job!
2025-12-22 06:12:00 (31200): Guest Log: Copying the results back to the shared directory!
2025-12-22 06:12:00 (31200): Guest Log:  *** Contents of shared directory: ***
2025-12-22 06:12:00 (31200): Guest Log: total 1400680
2025-12-22 06:12:00 (31200): Guest Log: -rwxrwxrwx. 1 root root  416335776 Dec 22 02:40 ATLAS.root_0
2025-12-22 06:12:00 (31200): Guest Log: -rwxrwxrwx. 1 root root 1011496900 Dec 22  2025 HITS.pool.root.1
2025-12-22 06:12:00 (31200): Guest Log: -rwxrwxrwx. 1 root root       9295 Dec 22 02:40 init_data.xml
2025-12-22 06:12:00 (31200): Guest Log: -rwxrwxrwx. 1 root root     592604 Dec 20 23:01 input.tar.gz
2025-12-22 06:12:00 (31200): Guest Log: -rwxrwxrwx. 1 root root    5836800 Dec 22  2025 result.tar.gz
2025-12-22 06:12:00 (31200): Guest Log: -rwxrwxrwx. 1 root root      15847 Dec 20 23:01 start_atlas.sh
2025-12-22 06:12:00 (31200): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-22 06:12:00 (31200): VM Completion File Detected.
2025-12-22 06:12:00 (31200): Powering off VM.
2025-12-22 06:12:00 (31200): Successfully stopped VM.
2025-12-22 06:12:00 (31200): Deregistering VM. (boinc_0d264c22c4164437, slot#0)
2025-12-22 06:12:00 (31200): Removing network bandwidth throttle group from VM.
2025-12-22 06:12:01 (31200): Removing VM from VirtualBox.
2025-12-22 06:12:06 (31200): called boinc_finish(0)

</stderr_txt>
]]>

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