Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-25 11:33:20 (16372): vboxwrapper version 26210
2025-12-25 11:33:20 (16372): BOINC client version: 8.2.4
2025-12-25 11:33:21 (16372): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2025-12-25 11:33:21 (16372): Successfully copied 'init_data.xml' to the shared directory.
2025-12-25 11:33:21 (16372): Create VM. (boinc_56d5a46855e34898, slot#0)
2025-12-25 11:33:22 (16372): Setting Memory Size for VM. (6600MB)
2025-12-25 11:33:22 (16372): Setting CPU Count for VM. (4)
2025-12-25 11:33:22 (16372): Setting Chipset Options for VM.
2025-12-25 11:33:23 (16372): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-25 11:33:23 (16372): Setting Boot Options for VM.
2025-12-25 11:33:23 (16372): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-25 11:33:24 (16372): Enabling VM Network Access.
2025-12-25 11:33:24 (16372): Disabling USB Support for VM.
2025-12-25 11:33:24 (16372): Disabling COM Port Support for VM.
2025-12-25 11:33:24 (16372): Disabling LPT Port Support for VM.
2025-12-25 11:33:25 (16372): Disabling Audio Support for VM.
2025-12-25 11:33:25 (16372): Disabling Clipboard Support for VM.
2025-12-25 11:33:25 (16372): Disabling Drag and Drop Support for VM.
2025-12-25 11:33:25 (16372): Adding storage controller(s) to VM.
2025-12-25 11:33:26 (16372): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-25 11:33:26 (16372): Adding VirtualBox Guest Additions to VM.
2025-12-25 11:33:27 (16372): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-25 11:33:27 (16372): forwarding host port 56791 to guest port 80
2025-12-25 11:33:27 (16372): Enabling remote desktop for VM.
2025-12-25 11:33:28 (16372): Enabling shared directory for VM.
2025-12-25 11:33:28 (16372): Starting VM using VBoxManage interface. (boinc_56d5a46855e34898, slot#0)
2025-12-25 11:33:35 (16372): Successfully started VM. (PID = '19392')
2025-12-25 11:33:35 (16372): Reporting VM Process ID to BOINC.
2025-12-25 11:33:35 (16372): Guest Log: BIOS: VirtualBox 7.2.2
2025-12-25 11:33:35 (16372): Guest Log: CPUID EDX: 0x178bfbff
2025-12-25 11:33:35 (16372): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-25 11:33:35 (16372): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-25 11:33:35 (16372): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-25 11:33:35 (16372): Detected: Web Application Enabled (http://localhost:56791)
2025-12-25 11:33:35 (16372): Detected: Remote Desktop Enabled (localhost:56792)
2025-12-25 11:33:35 (16372): Preference change detected
2025-12-25 11:33:35 (16372): Setting CPU throttle for VM. (100%)
2025-12-25 11:33:35 (16372): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-25 11:33:37 (16372): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-25 11:33:37 (16372): Guest Log: BIOS: Booting from Hard Disk...
2025-12-25 11:33:40 (16372): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-25 11:33:40 (16372): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-25 11:33:40 (16372): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-25 11:33:45 (16372): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-25 11:33:45 (16372): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-25 11:33:52 (16372): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-25 11:33:52 (16372): Guest Log: 00:00:00.000182 main     Log opened 2025-12-25T11:33:50.691274000Z
2025-12-25 11:33:52 (16372): Guest Log: 00:00:00.000343 main     OS Product: Linux
2025-12-25 11:33:52 (16372): Guest Log: 00:00:00.000389 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-25 11:33:52 (16372): Guest Log: 00:00:00.000428 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-25 11:33:52 (16372): Guest Log: 00:00:00.000465 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-25 11:33:52 (16372): Guest Log: 00:00:00.000467 main     Process ID: 1379
2025-12-25 11:33:52 (16372): Guest Log: 00:00:00.000468 main     Package type: LINUX_64BITS_GENERIC
2025-12-25 11:33:52 (16372): Guest Log: 00:00:00.001849 main     5.2.32 r132073 started. Verbose level = 0
2025-12-25 11:33:52 (16372): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-25 11:33:52 (16372): Guest Log: [INFO] Mounting shared directory
2025-12-25 11:33:52 (16372): Guest Log: [INFO] Checking for init_data.xml
2025-12-25 11:33:58 (16372): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-25 11:33:58 (16372): Guest Log: [INFO] Detected branch: prod
2025-12-25 11:33:58 (16372): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-25 11:33:58 (16372): Guest Log: Copying input files
2025-12-25 11:34:00 (16372): Guest Log: Copied input files into RunAtlas.
2025-12-25 11:34:00 (16372): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2025-12-25 11:34:09 (16372): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-25 11:34:09 (16372): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-25 11:34:09 (16372): Guest Log: 2.6.3.0 1657 0 31652 154404 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2025-12-25 11:34:10 (16372): Guest Log: copied the webapp to /var/www
2025-12-25 11:34:10 (16372): Guest Log: ATHENA_PROC_NUMBER=4
2025-12-25 11:34:10 (16372): Guest Log: ATHENA_CORE_NUMBER=4
2025-12-25 11:34:11 (16372): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-25 11:34:11 (16372): Guest Log:  *** Starting ATLAS job. (PandaID=6938188725 taskID=47928965) ***
2025-12-25 13:13:55 (16372): Status Report: Elapsed Time: '6000.000000'
2025-12-25 13:13:55 (16372): Status Report: CPU Time: '21675.359375'
2025-12-25 14:54:17 (16372): Status Report: Elapsed Time: '12000.000000'
2025-12-25 14:54:17 (16372): Status Report: CPU Time: '45336.468750'
2025-12-25 16:34:38 (16372): Status Report: Elapsed Time: '18000.000000'
2025-12-25 16:34:38 (16372): Status Report: CPU Time: '69004.531250'
2025-12-25 18:14:59 (16372): Status Report: Elapsed Time: '24000.000000'
2025-12-25 18:14:59 (16372): Status Report: CPU Time: '92672.734375'
2025-12-25 19:55:21 (16372): Status Report: Elapsed Time: '30000.000000'
2025-12-25 19:55:21 (16372): Status Report: CPU Time: '116308.437500'
2025-12-25 21:35:48 (16372): Status Report: Elapsed Time: '36000.000000'
2025-12-25 21:35:48 (16372): Status Report: CPU Time: '139349.406250'
2025-12-25 22:09:28 (16372): Guest Log:  *** Job finished ***
2025-12-25 22:09:28 (16372): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:08:54,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:08:54,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:20,682 | INFO     | [monitor] cgroup control has ended
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:21,933 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302718207808)>', '<ExcThread(monitor, started 140302127974144)>']
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:22,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:22,151 | INFO     | [monitor] control thread has ended
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:26,939 | INFO     | all workflow threads have been joined
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:26,939 | INFO     | end of generic workflow (traces error code: 0)
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:26,939 | INFO     | traces error code: 0
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:26,939 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:27,022 [wrapper] ==== pilot stdout END ====
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:27,027 [wrapper] ==== wrapper stdout RESUME ====
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:27,032 [wrapper] pilotpid: 6068
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:27,037 [wrapper] Pilot exit status: 0
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:27,124 [wrapper] pandaids: 6938188725
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:27,165 [wrapper] cleanup supervisor_pilot 18050 6069
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:27,173 [wrapper] Test setup, not cleaning
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:27,177 [wrapper] apfmon messages muted
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:27,182 [wrapper] ==== wrapper stdout END ====
2025-12-25 22:09:28 (16372): Guest Log: 2025-12-25 22:09:27,187 [wrapper] ==== wrapper stderr END ====
2025-12-25 22:09:28 (16372): Guest Log:  *** Error codes and diagnostics ***
2025-12-25 22:09:28 (16372): Guest Log:     "exeErrorCode": 0,
2025-12-25 22:09:28 (16372): Guest Log:     "exeErrorDiag": "",
2025-12-25 22:09:28 (16372): Guest Log:     "pilotErrorCode": 0,
2025-12-25 22:09:28 (16372): Guest Log:     "pilotErrorDiag": "",
2025-12-25 22:09:28 (16372): Guest Log:  *** Listing of results directory ***
2025-12-25 22:09:28 (16372): Guest Log: total 375896
2025-12-25 22:09:28 (16372): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Dec 20 05:05 pilot3.tar.gz
2025-12-25 22:09:28 (16372): Guest Log: -rwx------. 1 atlas atlas     36322 Dec 20 05:08 runpilot2-wrapper.sh
2025-12-25 22:09:28 (16372): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Dec 20 05:12 queuedata.json
2025-12-25 22:09:28 (16372): Guest Log: -rwxr-xr-x. 1 atlas atlas      9564 Dec 25 11:33 init_data.xml
2025-12-25 22:09:28 (16372): Guest Log: -rwxr-xr-x. 1 atlas atlas    592404 Dec 25 11:33 input.tar.gz
2025-12-25 22:09:28 (16372): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec 25 11:33 start_atlas.sh
2025-12-25 22:09:28 (16372): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec 25 11:33 EVNT.47928963._000001.pool.root.1 -> /data/./ATLAS.root_0
2025-12-25 22:09:28 (16372): Guest Log: -rw-r--r--. 1 atlas atlas      2575 Dec 25 11:34 pandaJob.out
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas        50 Dec 25 11:34 setup.sh.local
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas    989280 Dec 25 11:35 agis_schedconf.cvmfs.json
2025-12-25 22:09:28 (16372): Guest Log: drwx------. 5 atlas atlas      4096 Dec 25 11:35 pilot3
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas 369616582 Dec 25 22:07 HITS.47928965._000020.pool.root.1
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas        95 Dec 25 22:07 pilot_heartbeat.json
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas      1034 Dec 25 22:08 memory_monitor_summary.json
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec 25 22:08 agis_ddmendpoints.agis.ALL.json
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas    730056 Dec 25 22:08 log.47928965._000020.job.log.tgz.1
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas      7818 Dec 25 22:08 heartbeat.json
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas      4877 Dec 25 22:09 pilotlog.txt
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas   4996022 Dec 25 22:09 log.47928965._000020.job.log.1
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas       357 Dec 25 22:09 output.list
2025-12-25 22:09:28 (16372): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec 25 22:09 runtime_log
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas   5744640 Dec 25 22:09 result.tar.gz
2025-12-25 22:09:28 (16372): Guest Log: -rw-r--r--. 1 atlas atlas      9239 Dec 25 22:09 runtime_log.err
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas       662 Dec 25 22:09 bPqNDmfN4q8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTUhKDmpX9izm.diag
2025-12-25 22:09:28 (16372): Guest Log: Looking for outputfile HITS.47928965._000020.pool.root.1
2025-12-25 22:09:28 (16372): Guest Log: HITS file was successfully produced
2025-12-25 22:09:28 (16372): Guest Log: -rw-------. 1 atlas atlas 369616582 Dec 25 22:07 /home/atlas/RunAtlas/HITS.47928965._000020.pool.root.1
2025-12-25 22:09:30 (16372): Guest Log: Successfully finished the ATLAS job!
2025-12-25 22:09:30 (16372): Guest Log: Copying the results back to the shared directory!
2025-12-25 22:09:31 (16372): Guest Log:  *** Contents of shared directory: ***
2025-12-25 22:09:31 (16372): Guest Log: total 717260
2025-12-25 22:09:31 (16372): Guest Log: -rwxrwxrwx. 1 root root 358482542 Dec 25 11:33 ATLAS.root_0
2025-12-25 22:09:31 (16372): Guest Log: -rwxrwxrwx. 1 root root 369616582 Dec 25 22:09 HITS.pool.root.1
2025-12-25 22:09:31 (16372): Guest Log: -rwxrwxrwx. 1 root root      9564 Dec 25 11:33 init_data.xml
2025-12-25 22:09:31 (16372): Guest Log: -rwxrwxrwx. 1 root root    592404 Dec 20 23:32 input.tar.gz
2025-12-25 22:09:31 (16372): Guest Log: -rwxrwxrwx. 1 root root   5744640 Dec 25 22:09 result.tar.gz
2025-12-25 22:09:31 (16372): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec 20 23:32 start_atlas.sh
2025-12-25 22:09:31 (16372): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-25 22:09:31 (16372): VM Completion File Detected.
2025-12-25 22:09:31 (16372): Powering off VM.
2025-12-25 22:09:32 (16372): Successfully stopped VM.
2025-12-25 22:09:32 (16372): Deregistering VM. (boinc_56d5a46855e34898, slot#0)
2025-12-25 22:09:32 (16372): Removing network bandwidth throttle group from VM.
2025-12-25 22:09:32 (16372): Removing VM from VirtualBox.
2025-12-25 22:09:37 (16372): called boinc_finish(0)

</stderr_txt>
]]>

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