Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:56:07 (29054): wrapper (7.7.26015): starting
06:56:07 (29054): wrapper: running run_atlas (--nthreads 8)
[2025-12-22 06:56:07] Arguments: --nthreads 8
[2025-12-22 06:56:07] Threads: 8
[2025-12-22 06:56:07] Checking for CVMFS
[2025-12-22 06:56:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-22 06:56:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-22 06:56:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-22 06:56:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-22 06:56:09] 2.11.2.0 10583 9085 86044 154287 0 66 20160709 25165824 2876 130560 0 6021807 99.804 2950941 2371 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-22 06:56:09] CVMFS is ok
[2025-12-22 06:56:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-22 06:56:09] Checking for apptainer binary...
[2025-12-22 06:56:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-22 06:56:09] Running /usr/bin/apptainer --version
[2025-12-22 06:56:09] apptainer version 1.3.2-1.el7
[2025-12-22 06:56:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-22 06:56:28] cg-vwn444.simple-grid.lan
[2025-12-22 06:56:28] apptainer works
[2025-12-22 06:56:28] Set ATHENA_PROC_NUMBER=8
[2025-12-22 06:56:28] Set ATHENA_CORE_NUMBER=8
[2025-12-22 06:56:28] Starting ATLAS job with PandaID=6937430156
[2025-12-22 06:56:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 12:32:55]  *** The last 200 lines of the pilot log: ***
[2025-12-22 12:32:55] 2025-12-22 11:31:51,124 | INFO     | monitor loop #1383: job 0:6937430156 is in state 'finished'
[2025-12-22 12:32:55] 2025-12-22 11:31:51,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 12:32:55] 2025-12-22 11:31:51,179 | INFO     | time since job start (19896s) is within the limit (174528.0s)
[2025-12-22 12:32:55] 2025-12-22 11:31:52,300 | INFO     | PID=396 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-12-22 12:32:55] 2025-12-22 11:31:52,300 | INFO     | .. there are 8 such processes running
[2025-12-22 12:32:55] 2025-12-22 11:31:53,302 | INFO     | time since job start (19898s) is within the limit (174528.0s)
[2025-12-22 12:32:55] 2025-12-22 11:31:53,631 | INFO     | monitor loop #1384: job 0:6937430156 is in state 'finished'
[2025-12-22 12:32:55] 2025-12-22 11:31:53,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 12:32:55] 2025-12-22 11:31:54,272 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-22 12:32:55] 2025-12-22 11:31:54,273 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-22 12:32:55] 2025-12-22 11:31:54,275 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6937430156/memory_monitor_summary.json (trf name=prmon)
[2025-12-22 12:32:55] 2025-12-22 11:31:54,276 | INFO     | extracted standard info from prmon json
[2025-12-22 12:32:55] 2025-12-22 11:31:54,276 | INFO     | extracted standard memory fields from prmon json
[2025-12-22 12:32:55] 2025-12-22 11:31:54,276 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-22 12:32:55] 2025-12-22 11:31:54,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-22 12:32:55] 2025-12-22 11:31:54,277 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-22 12:32:55] 2025-12-22 11:31:54,283 | INFO     | fitting pss+swap vs Time
[2025-12-22 12:32:55] 2025-12-22 11:31:54,283 | INFO     | sum of square deviations: 10065751520.0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,287 | INFO     | sum of deviations: 78672577545.99998
[2025-12-22 12:32:55] 2025-12-22 11:31:54,287 | INFO     | mean x: 1766393389.0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,287 | INFO     | mean y: 2464264.4388714735
[2025-12-22 12:32:55] 2025-12-22 11:31:54,287 | INFO     | intersect: -13803431956.695368
[2025-12-22 12:32:55] 2025-12-22 11:31:54,288 | INFO     | chi2: 3.4061531588683454
[2025-12-22 12:32:55] 2025-12-22 11:31:54,288 | INFO     | sum of square deviations: 9599817202.5
[2025-12-22 12:32:55] 2025-12-22 11:31:54,291 | INFO     | sum of deviations: 98211648098.0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,291 | INFO     | mean x: 1766393236.5
[2025-12-22 12:32:55] 2025-12-22 11:31:54,292 | INFO     | mean y: 2470571.5541401273
[2025-12-22 12:32:55] 2025-12-22 11:31:54,292 | INFO     | intersect: -18068747586.70904
[2025-12-22 12:32:55] 2025-12-22 11:31:54,292 | INFO     | chi2: 2.642058068557662
[2025-12-22 12:32:55] 2025-12-22 11:31:54,292 | INFO     | current chi2=2.642058068557662 (change=22.432787213965014 %)
[2025-12-22 12:32:55] 2025-12-22 11:31:54,292 | INFO     | right removable region: 313
[2025-12-22 12:32:55] 2025-12-22 11:31:54,293 | INFO     | sum of square deviations: 9599817202.5
[2025-12-22 12:32:55] 2025-12-22 11:31:54,296 | INFO     | sum of deviations: -241689960.5
[2025-12-22 12:32:55] 2025-12-22 11:31:54,296 | INFO     | mean x: 1766393541.5
[2025-12-22 12:32:55] 2025-12-22 11:31:54,296 | INFO     | mean y: 2490001.621019108
[2025-12-22 12:32:55] 2025-12-22 11:31:54,296 | INFO     | intersect: 46961638.55608606
[2025-12-22 12:32:55] 2025-12-22 11:31:54,297 | INFO     | chi2: 0.8176792174500388
[2025-12-22 12:32:55] 2025-12-22 11:31:54,297 | INFO     | current chi2=0.8176792174500388 (change=75.99405607111034 %)
[2025-12-22 12:32:55] 2025-12-22 11:31:54,297 | INFO     | sum of square deviations: 9148487810.0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,300 | INFO     | sum of deviations: -4070328333.999996
[2025-12-22 12:32:55] 2025-12-22 11:31:54,300 | INFO     | mean x: 1766393694.0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,301 | INFO     | mean y: 2491280.1035598707
[2025-12-22 12:32:55] 2025-12-22 11:31:54,301 | INFO     | intersect: 788391906.6342213
[2025-12-22 12:32:55] 2025-12-22 11:31:54,301 | INFO     | chi2: 0.791669101125725
[2025-12-22 12:32:55] 2025-12-22 11:31:54,301 | INFO     | current chi2=0.791669101125725 (change=3.1809682537153487 %)
[2025-12-22 12:32:55] 2025-12-22 11:31:54,301 | INFO     | left removable region: 20
[2025-12-22 12:32:55] 2025-12-22 11:31:54,302 | INFO     | sum of square deviations: 7799669962.0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,304 | INFO     | sum of deviations: 10504296136.0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,305 | INFO     | mean x: 1766393816.0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,305 | INFO     | mean y: 2500220.098976109
[2025-12-22 12:32:55] 2025-12-22 11:31:54,305 | INFO     | intersect: -2376411173.1345487
[2025-12-22 12:32:55] 2025-12-22 11:31:54,305 | INFO     | chi2: 0.0006804281866382483
[2025-12-22 12:32:55] 2025-12-22 11:31:54,305 | INFO     | current memory leak: 1.35 B/s (using 293 data points, chi2=0.00)
[2025-12-22 12:32:55] 2025-12-22 11:31:54,306 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-12-22 12:32:55] 2025-12-22 11:31:54,306 | INFO     | ..............................
[2025-12-22 12:32:55] 2025-12-22 11:31:54,306 | INFO     | . Timing measurements:
[2025-12-22 12:32:55] 2025-12-22 11:31:54,306 | INFO     | . get job = 0 s
[2025-12-22 12:32:55] 2025-12-22 11:31:54,306 | INFO     | . initial setup = 8 s
[2025-12-22 12:32:55] 2025-12-22 11:31:54,306 | INFO     | . payload setup = 129 s
[2025-12-22 12:32:55] 2025-12-22 11:31:54,307 | INFO     | . stage-in = 0 s
[2025-12-22 12:32:55] 2025-12-22 11:31:54,307 | INFO     | . payload execution = 19582 s
[2025-12-22 12:32:55] 2025-12-22 11:31:54,307 | INFO     | . stage-out = 1 s
[2025-12-22 12:32:55] 2025-12-22 11:31:54,307 | INFO     | . log creation = 0 s
[2025-12-22 12:32:55] 2025-12-22 11:31:54,307 | INFO     | ..............................
[2025-12-22 12:32:55] 2025-12-22 11:31:54,415 | INFO     | 
[2025-12-22 12:32:55] 2025-12-22 11:31:54,416 | INFO     | job summary report
[2025-12-22 12:32:55] 2025-12-22 11:31:54,416 | INFO     | --------------------------------------------------
[2025-12-22 12:32:55] 2025-12-22 11:31:54,416 | INFO     | PanDA job id: 6937430156
[2025-12-22 12:32:55] 2025-12-22 11:31:54,416 | INFO     | task id: 47898763
[2025-12-22 12:32:55] 2025-12-22 11:31:54,416 | INFO     | errors: (none)
[2025-12-22 12:32:55] 2025-12-22 11:31:54,416 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-22 12:32:55] 2025-12-22 11:31:54,416 | INFO     | pilot state: finished 
[2025-12-22 12:32:55] 2025-12-22 11:31:54,416 | INFO     | transexitcode: 0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,416 | INFO     | exeerrorcode: 0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,416 | INFO     | exeerrordiag: 
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | exitcode: 0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | exitmsg: OK
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | cpuconsumptiontime: 74522 s
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | nevents: 400
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | neventsw: 0
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | pid: 7065
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | pgrp: 7065
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | corecount: 8
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | event service: False
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | sizes: {0: 2283909, 1: 2283909, 11: 2283937, 22: 2283965, 33: 2283993, 44: 2284049, 54: 2284205, 65: 2284233, 76: 2284261, 83: 2284579, 87: 2284635, 19716: 2317296
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | --------------------------------------------------
[2025-12-22 12:32:55] 2025-12-22 11:31:54,417 | INFO     | 
[2025-12-22 12:32:55] 2025-12-22 11:31:54,418 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-12-22 12:32:55] 2025-12-22 11:31:54,446 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,446 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,446 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,446 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,447 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,447 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,447 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,447 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-22 12:32:55] 2025-12-22 11:31:54,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-22 12:32:55] 2025-12-22 11:31:54,448 | INFO     | job 6937430156 has completed (purged errors)
[2025-12-22 12:32:55] 2025-12-22 11:31:54,448 | INFO     | overall cleanup function is called
[2025-12-22 12:32:55] 2025-12-22 11:31:55,456 | INFO     | --- collectZombieJob: --- 10, [7065]
[2025-12-22 12:32:55] 2025-12-22 11:31:55,456 | INFO     | zombie collector waiting for pid 7065
[2025-12-22 12:32:55] 2025-12-22 11:31:55,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-22 12:32:55] 2025-12-22 11:31:55,456 | INFO     | collected zombie processes
[2025-12-22 12:32:55] 2025-12-22 11:31:55,456 | INFO     | will attempt to kill all subprocesses of pid=7065
[2025-12-22 12:32:55] 2025-12-22 11:31:55,545 | INFO     | process IDs to be killed: [7065] (in reverse order)
[2025-12-22 12:32:55] 2025-12-22 11:31:55,601 | WARNING  | found no corresponding commands to process id(s)
[2025-12-22 12:32:55] 2025-12-22 11:31:55,601 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-22 12:32:55] 2025-12-22 11:31:55,604 | INFO     | did not find any defunct processes belonging to 7065
[2025-12-22 12:32:55] 2025-12-22 11:31:55,607 | INFO     | did not find any defunct processes belonging to 7065
[2025-12-22 12:32:55] 2025-12-22 11:31:55,607 | INFO     | ready for new job
[2025-12-22 12:32:55] 2025-12-22 11:31:55,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-22 12:32:55] 2025-12-22 11:31:55,609 | INFO     | ***************************************
[2025-12-22 12:32:55] 2025-12-22 11:31:55,609 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-22 12:32:55] 2025-12-22 11:31:55,609 | INFO     | ***************************************
[2025-12-22 12:32:55] 2025-12-22 11:31:55,610 | INFO     | 
[2025-12-22 12:32:55] 2025-12-22 11:31:55,610 | INFO     | pilot is running in a VM
[2025-12-22 12:32:55] 2025-12-22 11:31:55,610 | INFO     | architecture information:
[2025-12-22 12:32:55] 2025-12-22 11:31:55,611 | INFO     | executing command: cat /etc/os-release
[2025-12-22 12:32:55] 2025-12-22 11:31:55,625 | INFO     | cat /etc/os-release:
[2025-12-22 12:32:55] NAME="CentOS Linux"
[2025-12-22 12:32:55] VERSION="7 (Core)"
[2025-12-22 12:32:55] ID="centos"
[2025-12-22 12:32:55] ID_LIKE="rhel fedora"
[2025-12-22 12:32:55] VERSION_ID="7"
[2025-12-22 12:32:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 12:32:55] ANSI_COLOR="0;31"
[2025-12-22 12:32:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 12:32:55] HOME_URL="https://www.centos.org/"
[2025-12-22 12:32:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 12:32:55] 
[2025-12-22 12:32:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 12:32:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 12:32:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 12:32:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 12:32:55] 
[2025-12-22 12:32:55] 2025-12-22 11:31:55,626 | INFO     | ***************************************
[2025-12-22 12:32:55] 2025-12-22 11:31:56,128 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-12-22 12:32:55] 2025-12-22 11:31:56,153 | INFO     | sufficient remaining disk space (497603837952 B)
[2025-12-22 12:32:55] 2025-12-22 11:31:56,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 12:32:55] 2025-12-22 11:31:56,154 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 12:32:55] 2025-12-22 11:31:56,154 | INFO     | update_server=False
[2025-12-22 12:32:55] 2025-12-22 11:31:56,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 12:32:55] 2025-12-22 11:31:56,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 12:32:55] 2025-12-22 11:31:56,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 12:32:55] 2025-12-22 11:31:56,586 | INFO     | all job control threads have been joined
[2025-12-22 12:32:55] 2025-12-22 11:31:56,729 | INFO     | all data control threads have been joined
[2025-12-22 12:32:55] 2025-12-22 11:31:57,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 12:32:55] 2025-12-22 11:31:57,139 | INFO     | aborting loop
[2025-12-22 12:32:55] 2025-12-22 11:31:57,159 | INFO     | [job] queue monitor thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:57,160 | INFO     | [job] retrieve thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:57,219 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:57,226 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:57,252 | INFO     | all payload control threads have been joined
[2025-12-22 12:32:55] 2025-12-22 11:31:57,592 | INFO     | [job] control thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:57,601 | INFO     | [job] validate thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:57,735 | INFO     | [data] control thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:57,844 | INFO     | [data] copytool_in thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:57,845 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:57,930 | INFO     | [payload] failed_post thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:58,146 | INFO     | [job] job monitor thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:58,146 | INFO     | [payload] validate_post thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:58,162 | INFO     | [data] copytool_out thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:58,244 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:58,258 | INFO     | [payload] control thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:31:58,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 12:32:55] 2025-12-22 11:32:02,774 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 12:32:55] 2025-12-22 11:32:26,482 | INFO     | PID=396 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-12-22 12:32:55] 2025-12-22 11:32:26,482 | INFO     | .. there are 9 such processes running
[2025-12-22 12:32:55] 2025-12-22 11:32:26,484 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 12:32:55] 2025-12-22 11:32:26,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 12:32:55] 2025-12-22 11:32:26,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 12:32:55] 2025-12-22 11:32:49,338 | INFO     | [monitor] cgroup control has ended
[2025-12-22 12:32:55] 2025-12-22 11:32:49,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265015437120)>', '<ExcThread(monitor, started 140264412792576)>']
[2025-12-22 12:32:55] 2025-12-22 11:32:50,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 12:32:55] 2025-12-22 11:32:50,613 | INFO     | [monitor] control thread has ended
[2025-12-22 12:32:55] 2025-12-22 11:32:54,885 | INFO     | all workflow threads have been joined
[2025-12-22 12:32:55] 2025-12-22 11:32:54,885 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 12:32:55] 2025-12-22 11:32:54,885 | INFO     | traces error code: 0
[2025-12-22 12:32:55] 2025-12-22 11:32:54,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 12:32:55] 2025-12-22 11:32:55,038 [wrapper] ==== pilot stdout END ====
[2025-12-22 12:32:55] 2025-12-22 11:32:55,044 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 12:32:55] 2025-12-22 11:32:55,047 [wrapper] pilotpid: 396
[2025-12-22 12:32:55] 2025-12-22 11:32:55,049 [wrapper] Pilot exit status: 0
[2025-12-22 12:32:55] 2025-12-22 11:32:55,079 [wrapper] pandaids: 6937430156
[2025-12-22 12:32:55] 2025-12-22 11:32:55,119 [wrapper] cleanup supervisor_pilot  7955 397
[2025-12-22 12:32:55] 2025-12-22 11:32:55,125 [wrapper] Test setup, not cleaning
[2025-12-22 12:32:55] 2025-12-22 11:32:55,128 [wrapper] apfmon messages muted
[2025-12-22 12:32:55] 2025-12-22 11:32:55,132 [wrapper] ==== wrapper stdout END ====
[2025-12-22 12:32:55] 2025-12-22 11:32:55,136 [wrapper] ==== wrapper stderr END ====
[2025-12-22 12:32:55]  *** Error codes and diagnostics ***
[2025-12-22 12:32:55]     "exeErrorCode": 0,
[2025-12-22 12:32:55]     "exeErrorDiag": "",
[2025-12-22 12:32:55]     "pilotErrorCode": 0,
[2025-12-22 12:32:55]     "pilotErrorDiag": "",
[2025-12-22 12:32:55]  *** Listing of results directory ***
[2025-12-22 12:32:55] total 441208
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc    579449 Dec 20 06:05 pilot3.tar.gz
[2025-12-22 12:32:55] -rwx------. 1 boinc boinc     36322 Dec 20 06:05 runpilot2-wrapper.sh
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc      5112 Dec 20 06:05 queuedata.json
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc       100 Dec 22 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 12:32:55] -rwxr-xr-x. 1 boinc boinc      7986 Dec 22 06:56 run_atlas
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc       105 Dec 22 06:56 job.xml
[2025-12-22 12:32:55] -rw-r--r--. 2 boinc boinc 222880092 Dec 22 06:56 EVNT.47898761._000821.pool.root.1
[2025-12-22 12:32:55] -rw-r--r--. 2 boinc boinc     15847 Dec 22 06:56 start_atlas.sh
[2025-12-22 12:32:55] drwxrwx--x. 2 boinc boinc        68 Dec 22 06:56 shared
[2025-12-22 12:32:55] -rw-r--r--. 2 boinc boinc    592406 Dec 22 06:56 input.tar.gz
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc      6391 Dec 22 06:56 init_data.xml
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc         0 Dec 22 06:56 boinc_lockfile
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc      2509 Dec 22 06:56 pandaJob.out
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc    987891 Dec 22 07:00 agis_schedconf.cvmfs.json
[2025-12-22 12:32:55] drwx------. 5 boinc boinc      4096 Dec 22 07:00 pilot3
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc 218664846 Dec 22 12:30 HITS.47898763._026270.pool.root.1
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc       531 Dec 22 12:31 boinc_task_state.xml
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc      1016 Dec 22 12:31 memory_monitor_summary.json
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc   1516240 Dec 22 12:31 agis_ddmendpoints.agis.ALL.json
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc    522275 Dec 22 12:31 log.47898763._026270.job.log.tgz.1
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc      7773 Dec 22 12:31 heartbeat.json
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc        95 Dec 22 12:32 pilot_heartbeat.json
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc      8192 Dec 22 12:32 boinc_mmap_file
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc        28 Dec 22 12:32 wrapper_checkpoint.txt
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc      4882 Dec 22 12:32 pilotlog.txt
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc   2656265 Dec 22 12:32 log.47898763._026270.job.log.1
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc       357 Dec 22 12:32 output.list
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc       620 Dec 22 12:32 runtime_log
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc   3194880 Dec 22 12:32 result.tar.gz
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc      8817 Dec 22 12:32 runtime_log.err
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc       657 Dec 22 12:32 J72MDmkK4q8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBUcKDmZkLUtn.diag
[2025-12-22 12:32:55] -rw-r--r--. 1 boinc boinc     21058 Dec 22 12:32 stderr.txt
[2025-12-22 12:32:55] HITS file was successfully produced:
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc 218664846 Dec 22 12:30 shared/HITS.pool.root.1
[2025-12-22 12:32:55]  *** Contents of shared directory: ***
[2025-12-22 12:32:55] total 434916
[2025-12-22 12:32:55] -rw-r--r--. 2 boinc boinc 222880092 Dec 22 06:56 ATLAS.root_0
[2025-12-22 12:32:55] -rw-r--r--. 2 boinc boinc     15847 Dec 22 06:56 start_atlas.sh
[2025-12-22 12:32:55] -rw-r--r--. 2 boinc boinc    592406 Dec 22 06:56 input.tar.gz
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc 218664846 Dec 22 12:30 HITS.pool.root.1
[2025-12-22 12:32:55] -rw-------. 1 boinc boinc   3194880 Dec 22 12:32 result.tar.gz
12:32:57 (29054): run_atlas exited; CPU time 74773.954783
12:32:57 (29054): called boinc_finish(0)

</stderr_txt>
]]>

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