Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
00:57:03 (717868): wrapper (7.7.26015): starting
00:57:03 (717868): wrapper: running run_atlas (--nthreads 4)
[2025-12-22 00:57:03] Arguments: --nthreads 4
[2025-12-22 00:57:03] Threads: 4
[2025-12-22 00:57:03] Checking for CVMFS
[2025-12-22 00:57:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-22 00:57:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-22 00:57:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-22 00:57:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-22 00:57:04] 2.13.1.0 45898 11716 122516 154278 3 97 9128319 10240000 1682 130560 0 21589645 99.973 717081 321 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2025-12-22 00:57:04] CVMFS is ok
[2025-12-22 00:57:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-22 00:57:04] Checking for apptainer binary...
[2025-12-22 00:57:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-22 00:57:04] Running /usr/bin/apptainer --version
[2025-12-22 00:57:04] apptainer version 1.4.4
[2025-12-22 00:57:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-22 00:57:05] ellievl
[2025-12-22 00:57:05] apptainer works
[2025-12-22 00:57:05] Set ATHENA_PROC_NUMBER=4
[2025-12-22 00:57:05] Set ATHENA_CORE_NUMBER=4
[2025-12-22 00:57:05] Starting ATLAS job with PandaID=6936593868
[2025-12-22 00:57:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 10:06:12]  *** The last 200 lines of the pilot log: ***
[2025-12-22 10:06:12] 2025-12-22 09:05:13,307 | INFO     | monitor loop #2423: job 0:6936593868 is in state 'finished'
[2025-12-22 10:06:12] 2025-12-22 09:05:13,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 10:06:12] 2025-12-22 09:05:13,479 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-22 10:06:12] 2025-12-22 09:05:13,481 | INFO     | found 24 cores (12 cores per socket, 2 sockets) , CPU MHz: 3700.0359999999987
[2025-12-22 10:06:12] 2025-12-22 09:05:13,483 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-6936593868/memory_monitor_summary.json (trf name=prmon)
[2025-12-22 10:06:12] 2025-12-22 09:05:13,484 | INFO     | extracted standard info from prmon json
[2025-12-22 10:06:12] 2025-12-22 09:05:13,484 | INFO     | extracted standard memory fields from prmon json
[2025-12-22 10:06:12] 2025-12-22 09:05:13,484 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-22 10:06:12] 2025-12-22 09:05:13,489 | INFO     | fitting pss+swap vs Time
[2025-12-22 10:06:12] 2025-12-22 09:05:13,490 | INFO     | sum of square deviations: 48555835628.775406
[2025-12-22 10:06:12] 2025-12-22 09:05:13,493 | INFO     | sum of deviations: 288573280328.2043
[2025-12-22 10:06:12] 2025-12-22 09:05:13,493 | INFO     | mean x: 1766377888.0204082
[2025-12-22 10:06:12] 2025-12-22 09:05:13,493 | INFO     | mean y: 2274023.9814471244
[2025-12-22 10:06:12] 2025-12-22 09:05:13,493 | INFO     | intersect: -10495526185.704908
[2025-12-22 10:06:12] 2025-12-22 09:05:13,493 | INFO     | chi2: 6.686134059721012
[2025-12-22 10:06:12] 2025-12-22 09:05:13,494 | INFO     | sum of square deviations: 47217051091.27319
[2025-12-22 10:06:12] 2025-12-22 09:05:13,496 | INFO     | sum of deviations: 432899156243.8652
[2025-12-22 10:06:12] 2025-12-22 09:05:13,496 | INFO     | mean x: 1766377735.5205994
[2025-12-22 10:06:12] 2025-12-22 09:05:13,496 | INFO     | mean y: 2290464.4213483147
[2025-12-22 10:06:12] 2025-12-22 09:05:13,496 | INFO     | intersect: -16192355614.527538
[2025-12-22 10:06:12] 2025-12-22 09:05:13,497 | INFO     | chi2: 3.510865794544273
[2025-12-22 10:06:12] 2025-12-22 09:05:13,497 | INFO     | current chi2=3.510865794544273 (change=47.49034698997991 %)
[2025-12-22 10:06:12] 2025-12-22 09:05:13,497 | INFO     | sum of square deviations: 45903104228.77093
[2025-12-22 10:06:12] 2025-12-22 09:05:13,499 | INFO     | sum of deviations: 440896090859.17535
[2025-12-22 10:06:12] 2025-12-22 09:05:13,500 | INFO     | mean x: 1766377583.020794
[2025-12-22 10:06:12] 2025-12-22 09:05:13,500 | INFO     | mean y: 2291383.438563327
[2025-12-22 10:06:12] 2025-12-22 09:05:13,500 | INFO     | intersect: -16963641191.70569
[2025-12-22 10:06:12] 2025-12-22 09:05:13,500 | INFO     | chi2: 3.4328299836335048
[2025-12-22 10:06:12] 2025-12-22 09:05:13,500 | INFO     | current chi2=3.4328299836335048 (change=2.222694214972053 %)
[2025-12-22 10:06:12] 2025-12-22 09:05:13,500 | INFO     | right removable region: 528
[2025-12-22 10:06:12] 2025-12-22 09:05:13,500 | INFO     | sum of square deviations: 47217044381.27319
[2025-12-22 10:06:12] 2025-12-22 09:05:13,503 | INFO     | sum of deviations: 154865863414.5319
[2025-12-22 10:06:12] 2025-12-22 09:05:13,503 | INFO     | mean x: 1766378040.5205994
[2025-12-22 10:06:12] 2025-12-22 09:05:13,503 | INFO     | mean y: 2289237.5880149812
[2025-12-22 10:06:12] 2025-12-22 09:05:13,504 | INFO     | intersect: -5791204699.745031
[2025-12-22 10:06:12] 2025-12-22 09:05:13,504 | INFO     | chi2: 4.041759209411655
[2025-12-22 10:06:12] 2025-12-22 09:05:13,504 | INFO     | current chi2=4.041759209411655 (change=39.55013205971669 %)
[2025-12-22 10:06:12] 2025-12-22 09:05:13,504 | INFO     | sum of square deviations: 45903090808.77093
[2025-12-22 10:06:12] 2025-12-22 09:05:13,507 | INFO     | sum of deviations: 95065269772.67838
[2025-12-22 10:06:12] 2025-12-22 09:05:13,507 | INFO     | mean x: 1766378193.020794
[2025-12-22 10:06:12] 2025-12-22 09:05:13,507 | INFO     | mean y: 2296156.574669187
[2025-12-22 10:06:12] 2025-12-22 09:05:13,507 | INFO     | intersect: -3655871877.025639
[2025-12-22 10:06:12] 2025-12-22 09:05:13,507 | INFO     | chi2: 3.3839633019797133
[2025-12-22 10:06:12] 2025-12-22 09:05:13,507 | INFO     | current chi2=3.3839633019797133 (change=16.274990006831576 %)
[2025-12-22 10:06:12] 2025-12-22 09:05:13,507 | INFO     | left removable region: 20
[2025-12-22 10:06:12] 2025-12-22 09:05:13,508 | INFO     | sum of square deviations: 40650479506.76196
[2025-12-22 10:06:12] 2025-12-22 09:05:13,510 | INFO     | sum of deviations: 237890473740.03702
[2025-12-22 10:06:12] 2025-12-22 09:05:13,510 | INFO     | mean x: 1766378162.5216537
[2025-12-22 10:06:12] 2025-12-22 09:05:13,510 | INFO     | mean y: 2315305.8602362205
[2025-12-22 10:06:12] 2025-12-22 09:05:13,510 | INFO     | intersect: -10334697762.249668
[2025-12-22 10:06:12] 2025-12-22 09:05:13,511 | INFO     | chi2: 0.07311412867200759
[2025-12-22 10:06:12] 2025-12-22 09:05:13,511 | INFO     | current memory leak: 5.85 B/s (using 508 data points, chi2=0.07)
[2025-12-22 10:06:12] 2025-12-22 09:05:13,511 | INFO     | could have reported an average CPU frequency of 3700 MHz (22 samples)
[2025-12-22 10:06:12] 2025-12-22 09:05:13,511 | INFO     | ..............................
[2025-12-22 10:06:12] 2025-12-22 09:05:13,511 | INFO     | . Timing measurements:
[2025-12-22 10:06:12] 2025-12-22 09:05:13,511 | INFO     | . get job = 0 s
[2025-12-22 10:06:12] 2025-12-22 09:05:13,511 | INFO     | . initial setup = 1 s
[2025-12-22 10:06:12] 2025-12-22 09:05:13,512 | INFO     | . payload setup = 11 s
[2025-12-22 10:06:12] 2025-12-22 09:05:13,512 | INFO     | . stage-in = 0 s
[2025-12-22 10:06:12] 2025-12-22 09:05:13,512 | INFO     | . payload execution = 32829 s
[2025-12-22 10:06:12] 2025-12-22 09:05:13,512 | INFO     | . stage-out = 1 s
[2025-12-22 10:06:12] 2025-12-22 09:05:13,512 | INFO     | . log creation = 0 s
[2025-12-22 10:06:12] 2025-12-22 09:05:13,512 | INFO     | ..............................
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | 
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | job summary report
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | --------------------------------------------------
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | PanDA job id: 6936593868
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | task id: 47947100
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | errors: (none)
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | pilot state: finished 
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | transexitcode: 0
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | exeerrorcode: 0
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | exeerrordiag: 
[2025-12-22 10:06:12] 2025-12-22 09:05:13,557 | INFO     | exitcode: 0
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | exitmsg: OK
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | cpuconsumptiontime: 128859 s
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | nevents: 1000
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | neventsw: 0
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | pid: 728391
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | pgrp: 728391
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | corecount: 4
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | event service: False
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | sizes: {0: 2284459, 1: 2284658, 8: 2284920, 11: 2284948, 32844: 2325301, 32846: 2334323, 32847: 2334507, 32854: 2334753}
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | --------------------------------------------------
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | 
[2025-12-22 10:06:12] 2025-12-22 09:05:13,558 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2025-12-22 10:06:12] 2025-12-22 09:05:13,598 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-22 10:06:12] 2025-12-22 09:05:13,601 | INFO     | job 6936593868 has completed (purged errors)
[2025-12-22 10:06:12] 2025-12-22 09:05:13,601 | INFO     | overall cleanup function is called
[2025-12-22 10:06:12] 2025-12-22 09:05:14,611 | INFO     | --- collectZombieJob: --- 10, [728391]
[2025-12-22 10:06:12] 2025-12-22 09:05:14,612 | INFO     | zombie collector waiting for pid 728391
[2025-12-22 10:06:12] 2025-12-22 09:05:14,612 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-22 10:06:12] 2025-12-22 09:05:14,612 | INFO     | collected zombie processes
[2025-12-22 10:06:12] 2025-12-22 09:05:14,612 | INFO     | will attempt to kill all subprocesses of pid=728391
[2025-12-22 10:06:12] 2025-12-22 09:05:14,806 | INFO     | process IDs to be killed: [728391] (in reverse order)
[2025-12-22 10:06:12] 2025-12-22 09:05:14,893 | WARNING  | found no corresponding commands to process id(s)
[2025-12-22 10:06:12] 2025-12-22 09:05:14,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-22 10:06:12] 2025-12-22 09:05:14,899 | INFO     | did not find any defunct processes belonging to 728391
[2025-12-22 10:06:12] 2025-12-22 09:05:14,904 | INFO     | did not find any defunct processes belonging to 728391
[2025-12-22 10:06:12] 2025-12-22 09:05:14,904 | INFO     | ready for new job
[2025-12-22 10:06:12] 2025-12-22 09:05:14,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-22 10:06:12] 2025-12-22 09:05:14,908 | INFO     | ***************************************
[2025-12-22 10:06:12] 2025-12-22 09:05:14,908 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-22 10:06:12] 2025-12-22 09:05:14,908 | INFO     | ***************************************
[2025-12-22 10:06:12] 2025-12-22 09:05:14,908 | INFO     | 
[2025-12-22 10:06:12] 2025-12-22 09:05:14,909 | INFO     | pilot is running in a VM
[2025-12-22 10:06:12] 2025-12-22 09:05:14,909 | INFO     | architecture information:
[2025-12-22 10:06:12] 2025-12-22 09:05:14,910 | INFO     | executing command: cat /etc/os-release
[2025-12-22 10:06:12] 2025-12-22 09:05:14,928 | INFO     | cat /etc/os-release:
[2025-12-22 10:06:12] NAME="CentOS Linux"
[2025-12-22 10:06:12] VERSION="7 (Core)"
[2025-12-22 10:06:12] ID="centos"
[2025-12-22 10:06:12] ID_LIKE="rhel fedora"
[2025-12-22 10:06:12] VERSION_ID="7"
[2025-12-22 10:06:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 10:06:12] ANSI_COLOR="0;31"
[2025-12-22 10:06:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 10:06:12] HOME_URL="https://www.centos.org/"
[2025-12-22 10:06:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 10:06:12] 
[2025-12-22 10:06:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 10:06:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 10:06:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 10:06:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 10:06:12] 
[2025-12-22 10:06:12] 2025-12-22 09:05:14,929 | INFO     | ***************************************
[2025-12-22 10:06:12] 2025-12-22 09:05:15,433 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2025-12-22 10:06:12] 2025-12-22 09:05:15,466 | INFO     | sufficient remaining disk space (55043948544 B)
[2025-12-22 10:06:12] 2025-12-22 09:05:15,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 10:06:12] 2025-12-22 09:05:15,466 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 10:06:12] 2025-12-22 09:05:15,467 | INFO     | update_server=False
[2025-12-22 10:06:12] 2025-12-22 09:05:15,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 10:06:12] 2025-12-22 09:05:15,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 10:06:12] 2025-12-22 09:05:15,472 | INFO     | all data control threads have been joined
[2025-12-22 10:06:12] 2025-12-22 09:05:15,811 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-22 10:06:12] 2025-12-22 09:05:15,812 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-22 10:06:12] 2025-12-22 09:05:15,812 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 10:06:12] 2025-12-22 09:05:15,812 | INFO     | will abort loop
[2025-12-22 10:06:12] 2025-12-22 09:05:16,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 10:06:12] 2025-12-22 09:05:16,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 10:06:12] 2025-12-22 09:05:16,472 | INFO     | [job] retrieve thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:16,473 | INFO     | [job] queue monitor thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:16,478 | INFO     | [data] control thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:16,503 | INFO     | [payload] failed_post thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:16,513 | INFO     | [job] validate thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:16,546 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:16,556 | INFO     | all payload control threads have been joined
[2025-12-22 10:06:12] 2025-12-22 09:05:16,671 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:16,781 | INFO     | all job control threads have been joined
[2025-12-22 10:06:12] 2025-12-22 09:05:16,820 | INFO     | [job] job monitor thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:17,263 | INFO     | [payload] validate_post thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:17,561 | INFO     | [payload] control thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:17,769 | INFO     | [data] copytool_in thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:17,783 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:17,786 | INFO     | [job] control thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:17,924 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:18,031 | INFO     | [data] copytool_out thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:20,327 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 10:06:12] 2025-12-22 09:05:45,647 | INFO     | PID=721727 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-22 10:06:12] 2025-12-22 09:05:45,648 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 10:06:12] 2025-12-22 09:05:45,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 10:06:12] 2025-12-22 09:05:45,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 10:06:12] 2025-12-22 09:06:06,594 | INFO     | [monitor] cgroup control has ended
[2025-12-22 10:06:12] 2025-12-22 09:06:07,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123534987327296)>', '<ExcThread(monitor, started 123533963278080)>']
[2025-12-22 10:06:12] 2025-12-22 09:06:07,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 10:06:12] 2025-12-22 09:06:07,767 | INFO     | [monitor] control thread has ended
[2025-12-22 10:06:12] 2025-12-22 09:06:12,034 | INFO     | all workflow threads have been joined
[2025-12-22 10:06:12] 2025-12-22 09:06:12,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 10:06:12] 2025-12-22 09:06:12,034 | INFO     | traces error code: 0
[2025-12-22 10:06:12] 2025-12-22 09:06:12,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 10:06:12] 2025-12-22 09:06:12,153 [wrapper] ==== pilot stdout END ====
[2025-12-22 10:06:12] 2025-12-22 09:06:12,161 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 10:06:12] 2025-12-22 09:06:12,167 [wrapper] pilotpid: 721727
[2025-12-22 10:06:12] 2025-12-22 09:06:12,173 [wrapper] Pilot exit status: 0
[2025-12-22 10:06:12] 2025-12-22 09:06:12,197 [wrapper] pandaids: 6936593868
[2025-12-22 10:06:12] 2025-12-22 09:06:12,271 [wrapper] cleanup supervisor_pilot  844923 721728
[2025-12-22 10:06:12] 2025-12-22 09:06:12,278 [wrapper] Test setup, not cleaning
[2025-12-22 10:06:12] 2025-12-22 09:06:12,284 [wrapper] apfmon messages muted
[2025-12-22 10:06:12] 2025-12-22 09:06:12,290 [wrapper] ==== wrapper stdout END ====
[2025-12-22 10:06:12] 2025-12-22 09:06:12,297 [wrapper] ==== wrapper stderr END ====
[2025-12-22 10:06:12]  *** Error codes and diagnostics ***
[2025-12-22 10:06:12]     "exeErrorCode": 0,
[2025-12-22 10:06:12]     "exeErrorDiag": "",
[2025-12-22 10:06:12]     "pilotErrorCode": 0,
[2025-12-22 10:06:12]     "pilotErrorDiag": "",
[2025-12-22 10:06:12]  *** Listing of results directory ***
[2025-12-22 10:06:12] insgesamt 1266984
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc    579449 Dez 20 01:14 pilot3.tar.gz
[2025-12-22 10:06:12] -rwx------ 1 yeti boinc     36322 Dez 20 01:14 runpilot2-wrapper.sh
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc      5112 Dez 20 01:16 queuedata.json
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc       100 Dez 22 00:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 10:06:12] -rwxr-xr-x 1 yeti boinc      7986 Dez 22 00:57 run_atlas
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc       105 Dez 22 00:57 job.xml
[2025-12-22 10:06:12] -rw-r--r-- 2 yeti boinc 395492910 Dez 22 00:57 EVNT.47947098._000023.pool.root.1
[2025-12-22 10:06:12] -rw-r--r-- 2 yeti boinc     15847 Dez 22 00:57 start_atlas.sh
[2025-12-22 10:06:12] drwxrwx--x 2 yeti boinc      4096 Dez 22 00:57 shared
[2025-12-22 10:06:12] -rw-r--r-- 2 yeti boinc    592603 Dez 22 00:57 input.tar.gz
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc      6558 Dez 22 00:57 init_data.xml
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc         0 Dez 22 00:57 boinc_setup_complete
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc         0 Dez 22 00:57 boinc_lockfile
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc      2889 Dez 22 00:57 pandaJob.out
[2025-12-22 10:06:12] -rw------- 1 yeti boinc        52 Dez 22 00:57 setup.sh.local
[2025-12-22 10:06:12] -rw------- 1 yeti boinc    988254 Dez 22 00:57 agis_schedconf.cvmfs.json
[2025-12-22 10:06:12] drwx------ 5 yeti boinc      4096 Dez 22 00:57 pilot3
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc       532 Dez 22 09:57 boinc_task_state.xml
[2025-12-22 10:06:12] -rw------- 1 yeti boinc 886051568 Dez 22 10:04 HITS.47947100._000221.pool.root.1
[2025-12-22 10:06:12] -rw------- 1 yeti boinc        95 Dez 22 10:04 pilot_heartbeat.json
[2025-12-22 10:06:12] -rw------- 1 yeti boinc      1037 Dez 22 10:05 memory_monitor_summary.json
[2025-12-22 10:06:12] -rw------- 1 yeti boinc   1516240 Dez 22 10:05 agis_ddmendpoints.agis.ALL.json
[2025-12-22 10:06:12] -rw------- 1 yeti boinc   1365180 Dez 22 10:05 log.47947100._000221.job.log.tgz.1
[2025-12-22 10:06:12] -rw------- 1 yeti boinc      8560 Dez 22 10:05 heartbeat.json
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc      8192 Dez 22 10:06 boinc_mmap_file
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc        29 Dez 22 10:06 wrapper_checkpoint.txt
[2025-12-22 10:06:12] -rw------- 1 yeti boinc      5009 Dez 22 10:06 pilotlog.txt
[2025-12-22 10:06:12] -rw------- 1 yeti boinc   4599561 Dez 22 10:06 log.47947100._000221.job.log.1
[2025-12-22 10:06:12] -rw------- 1 yeti boinc       353 Dez 22 10:06 output.list
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc       620 Dez 22 10:06 runtime_log
[2025-12-22 10:06:12] -rw------- 1 yeti boinc   5980160 Dez 22 10:06 result.tar.gz
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc      9538 Dez 22 10:06 runtime_log.err
[2025-12-22 10:06:12] -rw------- 1 yeti boinc       646 Dez 22 10:06 ekxLDmmnzq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmW6gKDmuOdvWo.diag
[2025-12-22 10:06:12] -rw-r--r-- 1 yeti boinc     20928 Dez 22 10:06 stderr.txt
[2025-12-22 10:06:12] HITS file was successfully produced:
[2025-12-22 10:06:12] -rw------- 1 yeti boinc 886051568 Dez 22 10:04 shared/HITS.pool.root.1
[2025-12-22 10:06:12]  *** Contents of shared directory: ***
[2025-12-22 10:06:12] insgesamt 1257956
[2025-12-22 10:06:12] -rw-r--r-- 2 yeti boinc 395492910 Dez 22 00:57 ATLAS.root_0
[2025-12-22 10:06:12] -rw-r--r-- 2 yeti boinc     15847 Dez 22 00:57 start_atlas.sh
[2025-12-22 10:06:12] -rw-r--r-- 2 yeti boinc    592603 Dez 22 00:57 input.tar.gz
[2025-12-22 10:06:12] -rw------- 1 yeti boinc 886051568 Dez 22 10:04 HITS.pool.root.1
[2025-12-22 10:06:12] -rw------- 1 yeti boinc   5980160 Dez 22 10:06 result.tar.gz
10:06:13 (717868): run_atlas exited; CPU time 129668.618939
10:06:13 (717868): called boinc_finish(0)

</stderr_txt>
]]>

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