Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:38:29 (562642): wrapper (7.7.26015): starting
16:38:29 (562642): wrapper: running run_atlas (--nthreads 12)
[2025-12-21 16:38:29] Arguments: --nthreads 12
[2025-12-21 16:38:29] Threads: 12
[2025-12-21 16:38:29] Checking for CVMFS
[2025-12-21 16:38:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-21 16:38:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-21 16:38:30] Running cvmfs_config stat atlas.cern.ch
[2025-12-21 16:38:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-21 16:38:31] 2.13.3.0 525390 12143 262688 154266 0 524 40433791 46080001 31993 130560 0 97512834 99.814 47229744 24984 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-12-21 16:38:31] CVMFS is ok
[2025-12-21 16:38:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-21 16:38:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-21 16:38:31] Further information can be found at the LHC@home message board.
[2025-12-21 16:38:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-21 16:38:31] Checking for apptainer binary...
[2025-12-21 16:38:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-21 16:38:31] Running /usr/bin/apptainer --version
[2025-12-21 16:38:31] apptainer version 1.4.4-1.el9
[2025-12-21 16:38:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-21 16:38:32] mff2102.farm.particle.cz
[2025-12-21 16:38:32] apptainer works
[2025-12-21 16:38:32] Set ATHENA_PROC_NUMBER=12
[2025-12-21 16:38:32] Set ATHENA_CORE_NUMBER=12
[2025-12-21 16:38:32] Starting ATLAS job with PandaID=6935439861
[2025-12-21 16:38:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 04:21:43]  *** The last 200 lines of the pilot log: ***
[2025-12-22 04:21:43] 2025-12-22 03:20:43,151 | INFO     | monitor loop #2647: job 0:6935439861 is in state 'finished'
[2025-12-22 04:21:43] 2025-12-22 03:20:43,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:21:43] 2025-12-22 03:20:43,749 | INFO     | time since job start (42082s) is within the limit (174528.0s)
[2025-12-22 04:21:43] 2025-12-22 03:20:45,661 | INFO     | monitor loop #2648: job 0:6935439861 is in state 'finished'
[2025-12-22 04:21:43] 2025-12-22 03:20:45,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:21:43] 2025-12-22 03:20:45,761 | INFO     | time since job start (42084s) is within the limit (174528.0s)
[2025-12-22 04:21:43] 2025-12-22 03:20:47,769 | INFO     | time since job start (42086s) is within the limit (174528.0s)
[2025-12-22 04:21:43] 2025-12-22 03:20:48,170 | INFO     | monitor loop #2649: job 0:6935439861 is in state 'finished'
[2025-12-22 04:21:43] 2025-12-22 03:20:48,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:21:43] 2025-12-22 03:20:50,443 | INFO     | PID=567072 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-22 04:21:43] 2025-12-22 03:20:50,447 | INFO     | .. there are 78 such processes running
[2025-12-22 04:21:43] 2025-12-22 03:20:50,713 | INFO     | monitor loop #2650: job 0:6935439861 is in state 'finished'
[2025-12-22 04:21:43] 2025-12-22 03:20:50,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:21:43] 2025-12-22 03:20:51,448 | INFO     | time since job start (42090s) is within the limit (174528.0s)
[2025-12-22 04:21:43] 2025-12-22 03:20:53,223 | INFO     | monitor loop #2651: job 0:6935439861 is in state 'finished'
[2025-12-22 04:21:43] 2025-12-22 03:20:53,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:21:43] 2025-12-22 03:20:53,455 | INFO     | time since job start (42092s) is within the limit (174528.0s)
[2025-12-22 04:21:43] 2025-12-22 03:20:54,861 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-22 04:21:43] 2025-12-22 03:20:54,894 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2769.680281249999
[2025-12-22 04:21:43] 2025-12-22 03:20:54,935 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6935439861/memory_monitor_summary.json (trf name=prmon)
[2025-12-22 04:21:43] 2025-12-22 03:20:54,936 | INFO     | extracted standard info from prmon json
[2025-12-22 04:21:43] 2025-12-22 03:20:54,936 | INFO     | extracted standard memory fields from prmon json
[2025-12-22 04:21:43] 2025-12-22 03:20:54,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-22 04:21:43] 2025-12-22 03:20:54,979 | INFO     | fitting pss+swap vs Time
[2025-12-22 04:21:43] 2025-12-22 03:20:54,981 | INFO     | sum of square deviations: 100977369747.96375
[2025-12-22 04:21:43] 2025-12-22 03:20:55,011 | INFO     | sum of deviations: -121722096891.39963
[2025-12-22 04:21:43] 2025-12-22 03:20:55,012 | INFO     | mean x: 1766352618.6322675
[2025-12-22 04:21:43] 2025-12-22 03:20:55,013 | INFO     | mean y: 3349590.9549418604
[2025-12-22 04:21:43] 2025-12-22 03:20:55,013 | INFO     | intersect: 2132580577.3252316
[2025-12-22 04:21:43] 2025-12-22 03:20:55,014 | INFO     | chi2: 40.36656600891738
[2025-12-22 04:21:43] 2025-12-22 03:20:55,015 | INFO     | sum of square deviations: 98792138970.06442
[2025-12-22 04:21:43] 2025-12-22 03:20:55,040 | INFO     | sum of deviations: 160719344912.59192
[2025-12-22 04:21:43] 2025-12-22 03:20:55,040 | INFO     | mean x: 1766352466.147877
[2025-12-22 04:21:43] 2025-12-22 03:20:55,040 | INFO     | mean y: 3369294.20204978
[2025-12-22 04:21:43] 2025-12-22 03:20:55,041 | INFO     | intersect: -2870209658.5732336
[2025-12-22 04:21:43] 2025-12-22 03:20:55,041 | INFO     | chi2: 36.22823425925206
[2025-12-22 04:21:43] 2025-12-22 03:20:55,041 | INFO     | current chi2=36.22823425925206 (change=10.251879609355722 %)
[2025-12-22 04:21:43] 2025-12-22 03:20:55,042 | INFO     | right removable region: 682
[2025-12-22 04:21:43] 2025-12-22 03:20:55,047 | INFO     | sum of square deviations: 98791244100.06439
[2025-12-22 04:21:43] 2025-12-22 03:20:55,065 | INFO     | sum of deviations: -441817867393.1346
[2025-12-22 04:21:43] 2025-12-22 03:20:55,065 | INFO     | mean x: 1766352771.147877
[2025-12-22 04:21:43] 2025-12-22 03:20:55,065 | INFO     | mean y: 3371918.0805270863
[2025-12-22 04:21:43] 2025-12-22 03:20:55,065 | INFO     | intersect: 7902920319.576969
[2025-12-22 04:21:43] 2025-12-22 03:20:55,066 | INFO     | chi2: 36.28924816812043
[2025-12-22 04:21:43] 2025-12-22 03:20:55,066 | INFO     | current chi2=36.28924816812043 (change=10.10072999495729 %)
[2025-12-22 04:21:43] 2025-12-22 03:20:55,066 | INFO     | left removable region: 10
[2025-12-22 04:21:43] 2025-12-22 03:20:55,067 | INFO     | sum of square deviations: 94094337561.48671
[2025-12-22 04:21:43] 2025-12-22 03:20:55,089 | INFO     | sum of deviations: -401438280143.88727
[2025-12-22 04:21:43] 2025-12-22 03:20:55,089 | INFO     | mean x: 1766352740.6830356
[2025-12-22 04:21:43] 2025-12-22 03:20:55,089 | INFO     | mean y: 3417817.1413690476
[2025-12-22 04:21:43] 2025-12-22 03:20:55,090 | INFO     | intersect: 7539276240.969311
[2025-12-22 04:21:43] 2025-12-22 03:20:55,090 | INFO     | chi2: 27.71879557783213
[2025-12-22 04:21:43] 2025-12-22 03:20:55,090 | INFO     | current memory leak: -4.27 B/s (using 672 data points, chi2=27.72)
[2025-12-22 04:21:43] 2025-12-22 03:20:55,091 | INFO     | could have reported an average CPU frequency of 2763 MHz (26 samples)
[2025-12-22 04:21:43] 2025-12-22 03:20:55,091 | INFO     | ..............................
[2025-12-22 04:21:43] 2025-12-22 03:20:55,092 | INFO     | . Timing measurements:
[2025-12-22 04:21:43] 2025-12-22 03:20:55,092 | INFO     | . get job = 0 s
[2025-12-22 04:21:43] 2025-12-22 03:20:55,092 | INFO     | . initial setup = 2 s
[2025-12-22 04:21:43] 2025-12-22 03:20:55,096 | INFO     | . payload setup = 31 s
[2025-12-22 04:21:43] 2025-12-22 03:20:55,096 | INFO     | . stage-in = 0 s
[2025-12-22 04:21:43] 2025-12-22 03:20:55,096 | INFO     | . payload execution = 41951 s
[2025-12-22 04:21:43] 2025-12-22 03:20:55,096 | INFO     | . stage-out = 4 s
[2025-12-22 04:21:43] 2025-12-22 03:20:55,096 | INFO     | . log creation = 1 s
[2025-12-22 04:21:43] 2025-12-22 03:20:55,096 | INFO     | ..............................
[2025-12-22 04:21:43] 2025-12-22 03:20:55,463 | INFO     | time since job start (42094s) is within the limit (174528.0s)
[2025-12-22 04:21:43] 2025-12-22 03:20:55,569 | INFO     | 
[2025-12-22 04:21:43] 2025-12-22 03:20:55,569 | INFO     | job summary report
[2025-12-22 04:21:43] 2025-12-22 03:20:55,569 | INFO     | --------------------------------------------------
[2025-12-22 04:21:43] 2025-12-22 03:20:55,569 | INFO     | PanDA job id: 6935439861
[2025-12-22 04:21:43] 2025-12-22 03:20:55,569 | INFO     | task id: 47960988
[2025-12-22 04:21:43] 2025-12-22 03:20:55,569 | INFO     | errors: (none)
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | pilot state: finished 
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | transexitcode: 0
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | exeerrorcode: 0
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | exeerrordiag: 
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | exitcode: 0
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | exitmsg: OK
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | cpuconsumptiontime: 293019 s
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | nevents: 1000
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | neventsw: 0
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | pid: 578251
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | pgrp: 578251
[2025-12-22 04:21:43] 2025-12-22 03:20:55,570 | INFO     | corecount: 12
[2025-12-22 04:21:43] 2025-12-22 03:20:55,571 | INFO     | event service: False
[2025-12-22 04:21:43] 2025-12-22 03:20:55,571 | INFO     | sizes: {0: 2284431, 1: 2284630, 12: 2284630, 23: 2284658, 24: 2284948, 33: 2284976, 41986: 2330247, 41987: 2330246, 41992: 2339354, 42038: 2339544}
[2025-12-22 04:21:43] 2025-12-22 03:20:55,571 | INFO     | --------------------------------------------------
[2025-12-22 04:21:43] 2025-12-22 03:20:55,571 | INFO     | 
[2025-12-22 04:21:43] 2025-12-22 03:20:55,571 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2025-12-22 04:21:43] 2025-12-22 03:20:55,670 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,671 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,671 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,671 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,672 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,672 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,672 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,672 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,672 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-22 04:21:43] 2025-12-22 03:20:55,672 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,672 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-22 04:21:43] 2025-12-22 03:20:55,673 | INFO     | job 6935439861 has completed (purged errors)
[2025-12-22 04:21:43] 2025-12-22 03:20:55,673 | INFO     | overall cleanup function is called
[2025-12-22 04:21:43] 2025-12-22 03:20:56,735 | INFO     | --- collectZombieJob: --- 10, [578251]
[2025-12-22 04:21:43] 2025-12-22 03:20:56,735 | INFO     | zombie collector waiting for pid 578251
[2025-12-22 04:21:43] 2025-12-22 03:20:56,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-22 04:21:43] 2025-12-22 03:20:56,735 | INFO     | collected zombie processes
[2025-12-22 04:21:43] 2025-12-22 03:20:56,735 | INFO     | will attempt to kill all subprocesses of pid=578251
[2025-12-22 04:21:43] 2025-12-22 03:20:58,061 | INFO     | process IDs to be killed: [578251] (in reverse order)
[2025-12-22 04:21:43] 2025-12-22 03:20:58,527 | WARNING  | found no corresponding commands to process id(s)
[2025-12-22 04:21:43] 2025-12-22 03:20:58,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-22 04:21:43] 2025-12-22 03:20:58,599 | INFO     | did not find any defunct processes belonging to 578251
[2025-12-22 04:21:43] 2025-12-22 03:20:58,676 | INFO     | did not find any defunct processes belonging to 578251
[2025-12-22 04:21:43] 2025-12-22 03:20:58,676 | INFO     | ready for new job
[2025-12-22 04:21:43] 2025-12-22 03:20:58,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-22 04:21:43] 2025-12-22 03:20:58,684 | INFO     | ***************************************
[2025-12-22 04:21:43] 2025-12-22 03:20:58,685 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-22 04:21:43] 2025-12-22 03:20:58,685 | INFO     | ***************************************
[2025-12-22 04:21:43] 2025-12-22 03:20:58,685 | INFO     | 
[2025-12-22 04:21:43] 2025-12-22 03:20:58,695 | INFO     | architecture information:
[2025-12-22 04:21:43] 2025-12-22 03:20:58,703 | INFO     | executing command: cat /etc/os-release
[2025-12-22 04:21:43] 2025-12-22 03:20:58,785 | INFO     | cat /etc/os-release:
[2025-12-22 04:21:43] NAME="CentOS Linux"
[2025-12-22 04:21:43] VERSION="7 (Core)"
[2025-12-22 04:21:43] ID="centos"
[2025-12-22 04:21:43] ID_LIKE="rhel fedora"
[2025-12-22 04:21:43] VERSION_ID="7"
[2025-12-22 04:21:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 04:21:43] ANSI_COLOR="0;31"
[2025-12-22 04:21:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 04:21:43] HOME_URL="https://www.centos.org/"
[2025-12-22 04:21:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 04:21:43] 
[2025-12-22 04:21:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 04:21:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 04:21:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 04:21:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 04:21:43] 
[2025-12-22 04:21:43] 2025-12-22 03:20:58,786 | INFO     | ***************************************
[2025-12-22 04:21:43] 2025-12-22 03:20:59,288 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2025-12-22 04:21:43] 2025-12-22 03:20:59,400 | INFO     | sufficient remaining disk space (1662799314944 B)
[2025-12-22 04:21:43] 2025-12-22 03:20:59,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 04:21:43] 2025-12-22 03:20:59,400 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 04:21:43] 2025-12-22 03:20:59,400 | INFO     | update_server=False
[2025-12-22 04:21:43] 2025-12-22 03:20:59,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 04:21:43] 2025-12-22 03:20:59,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 04:21:43] 2025-12-22 03:20:59,401 | INFO     | aborting loop
[2025-12-22 04:21:43] 2025-12-22 03:20:59,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 04:21:43] 2025-12-22 03:20:59,813 | INFO     | all payload control threads have been joined
[2025-12-22 04:21:43] 2025-12-22 03:20:59,922 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 04:21:43] 2025-12-22 03:21:00,056 | INFO     | all data control threads have been joined
[2025-12-22 04:21:43] 2025-12-22 03:21:00,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 04:21:43] 2025-12-22 03:21:00,406 | INFO     | [job] retrieve thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:00,407 | INFO     | [job] job monitor thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:00,488 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:00,617 | INFO     | [payload] failed_post thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:00,646 | INFO     | all job control threads have been joined
[2025-12-22 04:21:43] 2025-12-22 03:21:00,819 | INFO     | [payload] control thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:00,961 | INFO     | [payload] validate_post thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:01,065 | INFO     | [data] control thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:01,320 | INFO     | [job] queue monitor thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:01,408 | INFO     | [data] copytool_out thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:01,506 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:01,510 | INFO     | [job] validate thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:01,543 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:01,597 | INFO     | [data] copytool_in thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:01,651 | INFO     | [job] control thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:01,684 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:03,937 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 04:21:43] 2025-12-22 03:21:30,218 | INFO     | PID=567072 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-22 04:21:43] 2025-12-22 03:21:30,218 | INFO     | .. there are 78 such processes running
[2025-12-22 04:21:43] 2025-12-22 03:21:30,219 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 04:21:43] 2025-12-22 03:21:30,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 04:21:43] 2025-12-22 03:21:30,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 04:21:43] 2025-12-22 03:21:33,148 | INFO     | [monitor] cgroup control has ended
[2025-12-22 04:21:43] 2025-12-22 03:21:34,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521033996096)>', '<ExcThread(monitor, started 140520676366080)>']
[2025-12-22 04:21:43] 2025-12-22 03:21:35,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 04:21:43] 2025-12-22 03:21:35,252 | INFO     | [monitor] control thread has ended
[2025-12-22 04:21:43] 2025-12-22 03:21:39,877 | INFO     | all workflow threads have been joined
[2025-12-22 04:21:43] 2025-12-22 03:21:39,878 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 04:21:43] 2025-12-22 03:21:39,878 | INFO     | traces error code: 0
[2025-12-22 04:21:43] 2025-12-22 03:21:39,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 04:21:43] 2025-12-22 03:21:40,289 [wrapper] ==== pilot stdout END ====
[2025-12-22 04:21:43] 2025-12-22 03:21:40,339 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 04:21:43] 2025-12-22 03:21:40,378 [wrapper] pilotpid: 567072
[2025-12-22 04:21:43] 2025-12-22 03:21:40,408 [wrapper] Pilot exit status: 0
[2025-12-22 04:21:43] 2025-12-22 03:21:40,533 [wrapper] pandaids: 6935439861
[2025-12-22 04:21:43] 2025-12-22 03:21:40,920 [wrapper] cleanup supervisor_pilot 3102770 567073
[2025-12-22 04:21:43] 2025-12-22 03:21:40,977 [wrapper] Test setup, not cleaning
[2025-12-22 04:21:43] 2025-12-22 03:21:41,019 [wrapper] apfmon messages muted
[2025-12-22 04:21:43] 2025-12-22 03:21:41,040 [wrapper] ==== wrapper stdout END ====
[2025-12-22 04:21:43] 2025-12-22 03:21:41,066 [wrapper] ==== wrapper stderr END ====
[2025-12-22 04:21:43]  *** Error codes and diagnostics ***
[2025-12-22 04:21:43]     "exeErrorCode": 0,
[2025-12-22 04:21:43]     "exeErrorDiag": "",
[2025-12-22 04:21:43]     "pilotErrorCode": 0,
[2025-12-22 04:21:43]     "pilotErrorDiag": "",
[2025-12-22 04:21:43]  *** Listing of results directory ***
[2025-12-22 04:21:43] total 1386368
[2025-12-22 04:21:43] -rwx------ 1 boinc boinc     36322 Dec 19 14:36 runpilot2-wrapper.sh
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc    579449 Dec 19 14:38 pilot3.tar.gz
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc      5112 Dec 19 14:40 queuedata.json
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc       100 Dec 21 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 04:21:43] -rwxr-xr-x 1 boinc boinc      7986 Dec 21 16:38 run_atlas
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc       105 Dec 21 16:38 job.xml
[2025-12-22 04:21:43] -rw-r--r-- 2 boinc boinc 412907389 Dec 21 16:38 EVNT.47960986._000091.pool.root.1
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc      6675 Dec 21 16:38 init_data.xml
[2025-12-22 04:21:43] -rw-r--r-- 2 boinc boinc     15847 Dec 21 16:38 start_atlas.sh
[2025-12-22 04:21:43] drwxrwx--x 2 boinc boinc      4096 Dec 21 16:38 shared
[2025-12-22 04:21:43] -rw-r--r-- 2 boinc boinc    592604 Dec 21 16:38 input.tar.gz
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc         0 Dec 21 16:38 boinc_lockfile
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc      2877 Dec 21 16:38 pandaJob.out
[2025-12-22 04:21:43] -rw------- 1 boinc boinc    988146 Dec 21 16:39 agis_schedconf.cvmfs.json
[2025-12-22 04:21:43] drwx------ 5 boinc boinc      4096 Dec 21 16:39 pilot3
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc       532 Dec 22 03:36 boinc_task_state.xml
[2025-12-22 04:21:43] -rw------- 1 boinc boinc 987039678 Dec 22 04:18 HITS.47960988._000407.pool.root.1
[2025-12-22 04:21:43] -rw------- 1 boinc boinc      1037 Dec 22 04:19 memory_monitor_summary.json
[2025-12-22 04:21:43] -rw------- 1 boinc boinc   1516240 Dec 22 04:20 agis_ddmendpoints.agis.ALL.json
[2025-12-22 04:21:43] -rw------- 1 boinc boinc   2365859 Dec 22 04:20 log.47960988._000407.job.log.tgz.1
[2025-12-22 04:21:43] -rw------- 1 boinc boinc      8599 Dec 22 04:20 heartbeat.json
[2025-12-22 04:21:43] -rw------- 1 boinc boinc        95 Dec 22 04:21 pilot_heartbeat.json
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc        28 Dec 22 04:21 wrapper_checkpoint.txt
[2025-12-22 04:21:43] -rw------- 1 boinc boinc      4826 Dec 22 04:21 pilotlog.txt
[2025-12-22 04:21:43] -rw------- 1 boinc boinc   5523124 Dec 22 04:21 log.47960988._000407.job.log.1
[2025-12-22 04:21:43] -rw------- 1 boinc boinc       353 Dec 22 04:21 output.list
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc       620 Dec 22 04:21 runtime_log
[2025-12-22 04:21:43] -rw------- 1 boinc boinc   7905280 Dec 22 04:21 result.tar.gz
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc      8881 Dec 22 04:21 runtime_log.err
[2025-12-22 04:21:43] -rw------- 1 boinc boinc       671 Dec 22 04:21 cikNDmKqpq8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvJgKDmPg0ILm.diag
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc      8192 Dec 22 04:21 boinc_mmap_file
[2025-12-22 04:21:43] -rw-r--r-- 1 boinc boinc     21785 Dec 22 04:21 stderr.txt
[2025-12-22 04:21:43] HITS file was successfully produced:
[2025-12-22 04:21:43] -rw------- 1 boinc boinc 987039678 Dec 22 04:18 shared/HITS.pool.root.1
[2025-12-22 04:21:43]  *** Contents of shared directory: ***
[2025-12-22 04:21:43] total 1375464
[2025-12-22 04:21:43] -rw-r--r-- 2 boinc boinc 412907389 Dec 21 16:38 ATLAS.root_0
[2025-12-22 04:21:43] -rw-r--r-- 2 boinc boinc     15847 Dec 21 16:38 start_atlas.sh
[2025-12-22 04:21:43] -rw-r--r-- 2 boinc boinc    592604 Dec 21 16:38 input.tar.gz
[2025-12-22 04:21:43] -rw------- 1 boinc boinc 987039678 Dec 22 04:18 HITS.pool.root.1
[2025-12-22 04:21:43] -rw------- 1 boinc boinc   7905280 Dec 22 04:21 result.tar.gz
04:21:45 (562642): run_atlas exited; CPU time 294021.638579
04:21:45 (562642): called boinc_finish(0)

</stderr_txt>
]]>

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