Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:10:38 (2278055): wrapper (7.7.26015): starting
21:10:38 (2278055): wrapper: running run_atlas (--nthreads 12)
[2025-12-21 21:10:38] Arguments: --nthreads 12
[2025-12-21 21:10:38] Threads: 12
[2025-12-21 21:10:38] Checking for CVMFS
[2025-12-21 21:10:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-21 21:10:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-21 21:10:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-21 21:10:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-21 21:10:40] 2.13.3.0 55115 13365 247056 154272 0 549 27434948 46080001 34713 130560 0 105089007 99.879 31577239 22124 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-12-21 21:10:40] CVMFS is ok
[2025-12-21 21:10:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-21 21:10:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-21 21:10:40] Further information can be found at the LHC@home message board.
[2025-12-21 21:10:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-21 21:10:40] Checking for apptainer binary...
[2025-12-21 21:10:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-21 21:10:40] Running /usr/bin/apptainer --version
[2025-12-21 21:10:41] apptainer version 1.4.4-1.el9
[2025-12-21 21:10:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-21 21:15:27] mff2104.farm.particle.cz
[2025-12-21 21:15:27] apptainer works
[2025-12-21 21:15:27] Set ATHENA_PROC_NUMBER=12
[2025-12-21 21:15:27] Set ATHENA_CORE_NUMBER=12
[2025-12-21 21:15:27] Starting ATLAS job with PandaID=6937446813
[2025-12-21 21:15:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 08:01:28]  *** The last 200 lines of the pilot log: ***
[2025-12-22 08:01:28] 2025-12-22 06:59:08,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 08:01:28] 2025-12-22 06:59:09,200 | INFO     | time since job start (38527s) is within the limit (174528.0s)
[2025-12-22 08:01:28] 2025-12-22 06:59:10,631 | INFO     | monitor loop #2426: job 0:6937446813 is in state 'finished'
[2025-12-22 08:01:28] 2025-12-22 06:59:10,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 08:01:28] 2025-12-22 06:59:11,207 | INFO     | time since job start (38529s) is within the limit (174528.0s)
[2025-12-22 08:01:28] 2025-12-22 06:59:13,136 | INFO     | monitor loop #2427: job 0:6937446813 is in state 'finished'
[2025-12-22 08:01:28] 2025-12-22 06:59:13,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 08:01:28] 2025-12-22 06:59:13,214 | INFO     | time since job start (38531s) is within the limit (174528.0s)
[2025-12-22 08:01:28] 2025-12-22 06:59:15,221 | INFO     | time since job start (38533s) is within the limit (174528.0s)
[2025-12-22 08:01:28] 2025-12-22 06:59:15,645 | INFO     | monitor loop #2428: job 0:6937446813 is in state 'finished'
[2025-12-22 08:01:28] 2025-12-22 06:59:15,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 08:01:28] 2025-12-22 06:59:17,228 | INFO     | time since job start (38535s) is within the limit (174528.0s)
[2025-12-22 08:01:28] 2025-12-22 06:59:18,149 | INFO     | monitor loop #2429: job 0:6937446813 is in state 'finished'
[2025-12-22 08:01:28] 2025-12-22 06:59:18,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 08:01:28] 2025-12-22 06:59:19,235 | INFO     | time since job start (38537s) is within the limit (174528.0s)
[2025-12-22 08:01:28] 2025-12-22 06:59:20,657 | INFO     | monitor loop #2430: job 0:6937446813 is in state 'finished'
[2025-12-22 08:01:28] 2025-12-22 06:59:20,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 08:01:28] 2025-12-22 06:59:21,242 | INFO     | time since job start (38539s) is within the limit (174528.0s)
[2025-12-22 08:01:28] 2025-12-22 06:59:22,777 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-22 08:01:28] 2025-12-22 06:59:22,805 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2825.788395833332
[2025-12-22 08:01:28] 2025-12-22 06:59:22,825 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-6937446813/memory_monitor_summary.json (trf name=prmon)
[2025-12-22 08:01:28] 2025-12-22 06:59:22,826 | INFO     | extracted standard info from prmon json
[2025-12-22 08:01:28] 2025-12-22 06:59:22,826 | INFO     | extracted standard memory fields from prmon json
[2025-12-22 08:01:28] 2025-12-22 06:59:22,826 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-22 08:01:28] 2025-12-22 06:59:22,839 | INFO     | fitting pss+swap vs Time
[2025-12-22 08:01:28] 2025-12-22 06:59:22,840 | INFO     | sum of square deviations: 76800380639.15865
[2025-12-22 08:01:28] 2025-12-22 06:59:22,848 | INFO     | sum of deviations: 1756809579683.5989
[2025-12-22 08:01:28] 2025-12-22 06:59:22,849 | INFO     | mean x: 1766367571.55414
[2025-12-22 08:01:28] 2025-12-22 06:59:22,849 | INFO     | mean y: 3346243.923566879
[2025-12-22 08:01:28] 2025-12-22 06:59:22,849 | INFO     | intersect: -40402332023.85491
[2025-12-22 08:01:28] 2025-12-22 06:59:22,849 | INFO     | chi2: 22.779306916108375
[2025-12-22 08:01:28] 2025-12-22 06:59:22,850 | INFO     | sum of square deviations: 74980963202.89236
[2025-12-22 08:01:28] 2025-12-22 06:59:22,866 | INFO     | sum of deviations: 2032343888507.8506
[2025-12-22 08:01:28] 2025-12-22 06:59:22,866 | INFO     | mean x: 1766367419.070626
[2025-12-22 08:01:28] 2025-12-22 06:59:22,866 | INFO     | mean y: 3369337.844301766
[2025-12-22 08:01:28] 2025-12-22 06:59:22,867 | INFO     | intersect: -47873663387.03132
[2025-12-22 08:01:28] 2025-12-22 06:59:22,867 | INFO     | chi2: 19.088590297814164
[2025-12-22 08:01:28] 2025-12-22 06:59:22,867 | INFO     | current chi2=19.088590297814164 (change=16.202058437890056 %)
[2025-12-22 08:01:28] 2025-12-22 06:59:22,867 | INFO     | right removable region: 622
[2025-12-22 08:01:28] 2025-12-22 06:59:22,868 | INFO     | sum of square deviations: 74980176302.89243
[2025-12-22 08:01:28] 2025-12-22 06:59:22,876 | INFO     | sum of deviations: 1444449594519.2327
[2025-12-22 08:01:28] 2025-12-22 06:59:22,876 | INFO     | mean x: 1766367724.070626
[2025-12-22 08:01:28] 2025-12-22 06:59:22,876 | INFO     | mean y: 3372414.1765650082
[2025-12-22 08:01:28] 2025-12-22 06:59:22,876 | INFO     | intersect: -34024676979.823753
[2025-12-22 08:01:28] 2025-12-22 06:59:22,877 | INFO     | chi2: 17.47325502447183
[2025-12-22 08:01:28] 2025-12-22 06:59:22,877 | INFO     | current chi2=17.47325502447183 (change=23.29329821656854 %)
[2025-12-22 08:01:28] 2025-12-22 06:59:22,877 | INFO     | left removable region: 10
[2025-12-22 08:01:28] 2025-12-22 06:59:22,882 | INFO     | sum of square deviations: 71078343645.88235
[2025-12-22 08:01:28] 2025-12-22 06:59:22,890 | INFO     | sum of deviations: 1460508384533.1958
[2025-12-22 08:01:28] 2025-12-22 06:59:22,890 | INFO     | mean x: 1766367693.6078432
[2025-12-22 08:01:28] 2025-12-22 06:59:22,890 | INFO     | mean y: 3423278.8758169934
[2025-12-22 08:01:28] 2025-12-22 06:59:22,890 | INFO     | intersect: -36291665975.53267
[2025-12-22 08:01:28] 2025-12-22 06:59:22,891 | INFO     | chi2: 9.095757075659366
[2025-12-22 08:01:28] 2025-12-22 06:59:22,891 | INFO     | current memory leak: 20.55 B/s (using 612 data points, chi2=9.10)
[2025-12-22 08:01:28] 2025-12-22 06:59:22,892 | INFO     | could have reported an average CPU frequency of 2783 MHz (24 samples)
[2025-12-22 08:01:28] 2025-12-22 06:59:22,892 | INFO     | ..............................
[2025-12-22 08:01:28] 2025-12-22 06:59:22,892 | INFO     | . Timing measurements:
[2025-12-22 08:01:28] 2025-12-22 06:59:22,892 | INFO     | . get job = 0 s
[2025-12-22 08:01:28] 2025-12-22 06:59:22,892 | INFO     | . initial setup = 6 s
[2025-12-22 08:01:28] 2025-12-22 06:59:22,892 | INFO     | . payload setup = 80 s
[2025-12-22 08:01:28] 2025-12-22 06:59:22,892 | INFO     | . stage-in = 0 s
[2025-12-22 08:01:28] 2025-12-22 06:59:22,892 | INFO     | . payload execution = 38320 s
[2025-12-22 08:01:28] 2025-12-22 06:59:22,892 | INFO     | . stage-out = 3 s
[2025-12-22 08:01:28] 2025-12-22 06:59:22,892 | INFO     | . log creation = 1 s
[2025-12-22 08:01:28] 2025-12-22 06:59:22,893 | INFO     | ..............................
[2025-12-22 08:01:28] 2025-12-22 06:59:23,004 | INFO     | 
[2025-12-22 08:01:28] 2025-12-22 06:59:23,004 | INFO     | job summary report
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | --------------------------------------------------
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | PanDA job id: 6937446813
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | task id: 47961002
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | errors: (none)
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | pilot state: finished 
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | transexitcode: 0
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | exeerrorcode: 0
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | exeerrordiag: 
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | exitcode: 0
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | exitmsg: OK
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | cpuconsumptiontime: 266689 s
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | nevents: 1000
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | neventsw: 0
[2025-12-22 08:01:28] 2025-12-22 06:59:23,005 | INFO     | pid: 2305573
[2025-12-22 08:01:28] 2025-12-22 06:59:23,006 | INFO     | pgrp: 2305573
[2025-12-22 08:01:28] 2025-12-22 06:59:23,006 | INFO     | corecount: 12
[2025-12-22 08:01:28] 2025-12-22 06:59:23,006 | INFO     | event service: False
[2025-12-22 08:01:28] 2025-12-22 06:59:23,006 | INFO     | sizes: {0: 2284402, 1: 2284601, 12: 2284601, 23: 2284629, 34: 2284657, 45: 2284685, 46: 2285103, 55: 2285131, 38404: 2326901, 38409: 2335897, 38411: 2335981, 38441
[2025-12-22 08:01:28] 2025-12-22 06:59:23,006 | INFO     | --------------------------------------------------
[2025-12-22 08:01:28] 2025-12-22 06:59:23,006 | INFO     | 
[2025-12-22 08:01:28] 2025-12-22 06:59:23,006 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2025-12-22 08:01:28] 2025-12-22 06:59:23,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,187 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-22 08:01:28] 2025-12-22 06:59:23,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,188 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-22 08:01:28] 2025-12-22 06:59:23,188 | INFO     | job 6937446813 has completed (purged errors)
[2025-12-22 08:01:28] 2025-12-22 06:59:23,188 | INFO     | overall cleanup function is called
[2025-12-22 08:01:28] 2025-12-22 06:59:24,218 | INFO     | --- collectZombieJob: --- 10, [2305573]
[2025-12-22 08:01:28] 2025-12-22 06:59:24,218 | INFO     | zombie collector waiting for pid 2305573
[2025-12-22 08:01:28] 2025-12-22 06:59:24,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-22 08:01:28] 2025-12-22 06:59:24,218 | INFO     | collected zombie processes
[2025-12-22 08:01:28] 2025-12-22 06:59:24,218 | INFO     | will attempt to kill all subprocesses of pid=2305573
[2025-12-22 08:01:28] 2025-12-22 06:59:25,043 | INFO     | process IDs to be killed: [2305573] (in reverse order)
[2025-12-22 08:01:28] 2025-12-22 06:59:25,471 | WARNING  | found no corresponding commands to process id(s)
[2025-12-22 08:01:28] 2025-12-22 06:59:25,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-22 08:01:28] 2025-12-22 06:59:25,504 | INFO     | did not find any defunct processes belonging to 2305573
[2025-12-22 08:01:28] 2025-12-22 06:59:25,528 | INFO     | did not find any defunct processes belonging to 2305573
[2025-12-22 08:01:28] 2025-12-22 06:59:25,530 | INFO     | ready for new job
[2025-12-22 08:01:28] 2025-12-22 06:59:25,530 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-22 08:01:28] 2025-12-22 06:59:25,540 | INFO     | ***************************************
[2025-12-22 08:01:28] 2025-12-22 06:59:25,541 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-22 08:01:28] 2025-12-22 06:59:25,541 | INFO     | ***************************************
[2025-12-22 08:01:28] 2025-12-22 06:59:25,541 | INFO     | 
[2025-12-22 08:01:28] 2025-12-22 06:59:25,551 | INFO     | architecture information:
[2025-12-22 08:01:28] 2025-12-22 06:59:25,559 | INFO     | executing command: cat /etc/os-release
[2025-12-22 08:01:28] 2025-12-22 06:59:25,709 | INFO     | cat /etc/os-release:
[2025-12-22 08:01:28] NAME="CentOS Linux"
[2025-12-22 08:01:28] VERSION="7 (Core)"
[2025-12-22 08:01:28] ID="centos"
[2025-12-22 08:01:28] ID_LIKE="rhel fedora"
[2025-12-22 08:01:28] VERSION_ID="7"
[2025-12-22 08:01:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 08:01:28] ANSI_COLOR="0;31"
[2025-12-22 08:01:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 08:01:28] HOME_URL="https://www.centos.org/"
[2025-12-22 08:01:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 08:01:28] 
[2025-12-22 08:01:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 08:01:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 08:01:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 08:01:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 08:01:28] 
[2025-12-22 08:01:28] 2025-12-22 06:59:25,710 | INFO     | ***************************************
[2025-12-22 08:01:28] 2025-12-22 06:59:26,213 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2025-12-22 08:01:28] 2025-12-22 06:59:26,351 | INFO     | sufficient remaining disk space (1653619032064 B)
[2025-12-22 08:01:28] 2025-12-22 06:59:26,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 08:01:28] 2025-12-22 06:59:26,352 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 08:01:28] 2025-12-22 06:59:26,352 | INFO     | update_server=False
[2025-12-22 08:01:28] 2025-12-22 06:59:26,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 08:01:28] 2025-12-22 06:59:26,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 08:01:28] 2025-12-22 06:59:26,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 08:01:28] 2025-12-22 06:59:26,610 | INFO     | all payload control threads have been joined
[2025-12-22 08:01:28] 2025-12-22 06:59:26,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 08:01:28] 2025-12-22 06:59:26,675 | INFO     | aborting loop
[2025-12-22 08:01:28] 2025-12-22 06:59:27,281 | INFO     | all data control threads have been joined
[2025-12-22 08:01:28] 2025-12-22 06:59:27,358 | INFO     | [job] retrieve thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:27,478 | INFO     | all job control threads have been joined
[2025-12-22 08:01:28] 2025-12-22 06:59:27,499 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:27,505 | INFO     | [job] validate thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:27,557 | INFO     | [payload] failed_post thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:27,616 | INFO     | [payload] control thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:27,681 | INFO     | [job] job monitor thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:28,019 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 08:01:28] 2025-12-22 06:59:28,211 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:28,289 | INFO     | [data] control thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:28,366 | INFO     | [data] copytool_out thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:28,484 | INFO     | [job] control thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:28,527 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:28,569 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:28,637 | INFO     | [payload] validate_post thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:28,652 | INFO     | [data] copytool_in thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:29,025 | INFO     | [job] queue monitor thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:30,364 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 08:01:28] 2025-12-22 06:59:55,306 | INFO     | PID=2292498 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-22 08:01:28] 2025-12-22 06:59:55,307 | INFO     | .. there are 76 such processes running
[2025-12-22 08:01:28] 2025-12-22 06:59:55,307 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 08:01:28] 2025-12-22 06:59:55,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 08:01:28] 2025-12-22 06:59:55,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 08:01:28] 2025-12-22 07:00:07,607 | INFO     | [monitor] cgroup control has ended
[2025-12-22 08:01:28] 2025-12-22 07:00:09,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140411089950528)>', '<ExcThread(monitor, started 140410726901504)>']
[2025-12-22 08:01:28] 2025-12-22 07:00:09,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 08:01:28] 2025-12-22 07:00:09,392 | INFO     | [monitor] control thread has ended
[2025-12-22 08:01:28] 2025-12-22 07:00:14,285 | INFO     | all workflow threads have been joined
[2025-12-22 08:01:28] 2025-12-22 07:00:14,285 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 08:01:28] 2025-12-22 07:00:14,285 | INFO     | traces error code: 0
[2025-12-22 08:01:28] 2025-12-22 07:00:14,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 08:01:28] 2025-12-22 07:00:14,560 [wrapper] ==== pilot stdout END ====
[2025-12-22 08:01:28] 2025-12-22 07:00:14,569 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 08:01:28] 2025-12-22 07:00:14,612 [wrapper] pilotpid: 2292498
[2025-12-22 08:01:28] 2025-12-22 07:00:14,648 [wrapper] Pilot exit status: 0
[2025-12-22 08:01:28] 2025-12-22 07:00:14,755 [wrapper] pandaids: 6937446813
[2025-12-22 08:01:28] 2025-12-22 07:00:15,024 [wrapper] cleanup supervisor_pilot  309962 2292499
[2025-12-22 08:01:28] 2025-12-22 07:00:15,042 [wrapper] Test setup, not cleaning
[2025-12-22 08:01:28] 2025-12-22 07:00:15,082 [wrapper] apfmon messages muted
[2025-12-22 08:01:28] 2025-12-22 07:00:15,096 [wrapper] ==== wrapper stdout END ====
[2025-12-22 08:01:28] 2025-12-22 07:00:15,127 [wrapper] ==== wrapper stderr END ====
[2025-12-22 08:01:28]  *** Error codes and diagnostics ***
[2025-12-22 08:01:28]     "exeErrorCode": 0,
[2025-12-22 08:01:28]     "exeErrorDiag": "",
[2025-12-22 08:01:28]     "pilotErrorCode": 0,
[2025-12-22 08:01:28]     "pilotErrorDiag": "",
[2025-12-22 08:01:28]  *** Listing of results directory ***
[2025-12-22 08:01:28] total 1258456
[2025-12-22 08:01:28] -rwx------ 1 boinc boinc     36322 Dec 20 06:08 runpilot2-wrapper.sh
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc      5112 Dec 20 06:13 queuedata.json
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc    579449 Dec 20 06:13 pilot3.tar.gz
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc       100 Dec 21 21:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 08:01:28] -rwxr-xr-x 1 boinc boinc      7986 Dec 21 21:10 run_atlas
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc       105 Dec 21 21:10 job.xml
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc      6675 Dec 21 21:10 init_data.xml
[2025-12-22 08:01:28] -rw-r--r-- 2 boinc boinc 392842853 Dec 21 21:10 EVNT.47961000._000052.pool.root.1
[2025-12-22 08:01:28] -rw-r--r-- 2 boinc boinc     15847 Dec 21 21:10 start_atlas.sh
[2025-12-22 08:01:28] drwxrwx--x 2 boinc boinc      4096 Dec 21 21:10 shared
[2025-12-22 08:01:28] -rw-r--r-- 2 boinc boinc    592610 Dec 21 21:10 input.tar.gz
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc         0 Dec 21 21:10 boinc_lockfile
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc      2892 Dec 21 21:15 pandaJob.out
[2025-12-22 08:01:28] -rw------- 1 boinc boinc    988204 Dec 21 21:16 agis_schedconf.cvmfs.json
[2025-12-22 08:01:28] drwx------ 5 boinc boinc      4096 Dec 21 21:17 pilot3
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc       532 Dec 22 07:47 boinc_task_state.xml
[2025-12-22 08:01:28] -rw------- 1 boinc boinc 877172398 Dec 22 07:58 HITS.47961002._000496.pool.root.1
[2025-12-22 08:01:28] -rw------- 1 boinc boinc      1038 Dec 22 07:58 memory_monitor_summary.json
[2025-12-22 08:01:28] -rw------- 1 boinc boinc   1516240 Dec 22 07:58 agis_ddmendpoints.agis.ALL.json
[2025-12-22 08:01:28] -rw------- 1 boinc boinc   2318319 Dec 22 07:58 log.47961002._000496.job.log.tgz.1
[2025-12-22 08:01:28] -rw------- 1 boinc boinc        95 Dec 22 07:59 pilot_heartbeat.json
[2025-12-22 08:01:28] -rw------- 1 boinc boinc      7924 Dec 22 07:59 heartbeat.json
[2025-12-22 08:01:28] -rw------- 1 boinc boinc      4827 Dec 22 08:00 pilotlog.txt
[2025-12-22 08:01:28] -rw------- 1 boinc boinc   5049845 Dec 22 08:00 log.47961002._000496.job.log.1
[2025-12-22 08:01:28] -rw------- 1 boinc boinc       353 Dec 22 08:00 output.list
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc       620 Dec 22 08:00 runtime_log
[2025-12-22 08:01:28] -rw------- 1 boinc boinc   7383040 Dec 22 08:00 result.tar.gz
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc      8881 Dec 22 08:00 runtime_log.err
[2025-12-22 08:01:28] -rw------- 1 boinc boinc       671 Dec 22 08:00 kCqNDm0N4q8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3XhKDmOI4zxn.diag
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc        28 Dec 22 08:01 wrapper_checkpoint.txt
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc      8192 Dec 22 08:01 boinc_mmap_file
[2025-12-22 08:01:28] -rw-r--r-- 1 boinc boinc     21751 Dec 22 08:01 stderr.txt
[2025-12-22 08:01:28] HITS file was successfully produced:
[2025-12-22 08:01:28] -rw------- 1 boinc boinc 877172398 Dec 22 07:58 shared/HITS.pool.root.1
[2025-12-22 08:01:28]  *** Contents of shared directory: ***
[2025-12-22 08:01:28] total 1248068
[2025-12-22 08:01:28] -rw-r--r-- 2 boinc boinc 392842853 Dec 21 21:10 ATLAS.root_0
[2025-12-22 08:01:28] -rw-r--r-- 2 boinc boinc     15847 Dec 21 21:10 start_atlas.sh
[2025-12-22 08:01:28] -rw-r--r-- 2 boinc boinc    592610 Dec 21 21:10 input.tar.gz
[2025-12-22 08:01:28] -rw------- 1 boinc boinc 877172398 Dec 22 07:58 HITS.pool.root.1
[2025-12-22 08:01:28] -rw------- 1 boinc boinc   7383040 Dec 22 08:00 result.tar.gz
08:01:30 (2278055): run_atlas exited; CPU time 267563.613707
08:01:30 (2278055): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN