Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:49:44 (375499): wrapper (7.7.26015): starting
12:49:44 (375499): wrapper: running run_atlas (--nthreads 12)
[2025-12-20 12:49:44] Arguments: --nthreads 12
[2025-12-20 12:49:44] Threads: 12
[2025-12-20 12:49:44] Checking for CVMFS
[2025-12-20 12:49:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-20 12:49:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-20 12:49:45] Running cvmfs_config stat atlas.cern.ch
[2025-12-20 12:49:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-20 12:49:45] 2.11.5.0 2137812 28253 368768 154237 0 548 31236386 45568001 14835 130560 0 177689046 99.795 118810111 24276 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-12-20 12:49:45] CVMFS is ok
[2025-12-20 12:49:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-20 12:49:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-20 12:49:45] Further information can be found at the LHC@home message board.
[2025-12-20 12:49:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-20 12:49:45] Checking for apptainer binary...
[2025-12-20 12:49:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-20 12:49:45] Running /usr/bin/apptainer --version
[2025-12-20 12:49:45] apptainer version 1.4.1-1.el9
[2025-12-20 12:49:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-20 12:49:46] wns0059.triumf.lcg
[2025-12-20 12:49:46] apptainer works
[2025-12-20 12:49:46] Set ATHENA_PROC_NUMBER=12
[2025-12-20 12:49:46] Set ATHENA_CORE_NUMBER=12
[2025-12-20 12:49:46] Starting ATLAS job with PandaID=6937287525
[2025-12-20 12:49:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-20 12:59:55]  *** The last 200 lines of the pilot log: ***
[2025-12-20 12:59:55] 2025-12-20 20:59:19,862 | INFO     | could have reported an average CPU frequency of 2092 MHz (4 samples)
[2025-12-20 12:59:55] 2025-12-20 20:59:19,862 | INFO     | ..............................
[2025-12-20 12:59:55] 2025-12-20 20:59:19,883 | INFO     | . Timing measurements:
[2025-12-20 12:59:55] 2025-12-20 20:59:19,883 | INFO     | . get job = 0 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . initial setup = 4 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . payload setup = 30 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . stage-in = 0 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . payload execution = 288 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . stage-out = 2 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . log creation = 0 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | ..............................
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6937287525/pilotlog.txt
[2025-12-20 12:59:55] 2025-12-20 20:59:20,044 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-12-20 12:59:55] - Log from pilotlog.txt -
[2025-12-20 12:59:55] 2025-12-20 20:59:19,859 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6937287525/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 12:59:55] 2025-12-20 20:59:19,860 | INFO     | extracted standard info from prmon json
[2025-12-20 12:59:55] 2025-12-20 20:59:19,860 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 12:59:55] 2025-12-20 20:59:19,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 12:59:55] 2025-12-20 20:59:19,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-20 12:59:55] 2025-12-20 20:59:19,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 12:59:55] 2025-12-20 20:59:19,861 | WARNING  | wrong length of table data, x=[1766263946.0, 1766264007.0, 1766264068.0, 1766264129.0, 1766264190.0], y=[1027.0, 314852.0, 616766.0, 335834.0, 695275.0] (must be s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,862 | INFO     | could have reported an average CPU frequency of 2092 MHz (4 samples)
[2025-12-20 12:59:55] 2025-12-20 20:59:19,862 | INFO     | ..............................
[2025-12-20 12:59:55] 2025-12-20 20:59:19,883 | INFO     | . Timing measurements:
[2025-12-20 12:59:55] 2025-12-20 20:59:19,883 | INFO     | . get job = 0 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . initial setup = 4 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . payload setup = 30 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . stage-in = 0 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . payload execution = 288 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . stage-out = 2 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . log creation = 0 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | ..............................
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6937287525/pilotlog.txt
[2025-12-20 12:59:55] 2025-12-20 20:59:20,044 | WARNING  | 
[2025-12-20 12:59:55] [begin log extracts]
[2025-12-20 12:59:55] - Log from pilotlog.txt -
[2025-12-20 12:59:55] 2025-12-20 20:59:19,859 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6937287525/memory_monitor_summary.json (trf name=prmon)
[2025-12-20 12:59:55] 2025-12-20 20:59:19,860 | INFO     | extracted standard info from prmon json
[2025-12-20 12:59:55] 2025-12-20 20:59:19,860 | INFO     | extracted standard memory fields from prmon json
[2025-12-20 12:59:55] 2025-12-20 20:59:19,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-20 12:59:55] 2025-12-20 20:59:19,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-20 12:59:55] 2025-12-20 20:59:19,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-20 12:59:55] 2025-12-20 20:59:19,861 | WARNING  | wrong length of table data, x=[1766263946.0, 1766264007.0, 1766264068.0, 1766264129.0, 1766264190.0], y=[1027.0, 314852.0, 616766.0, 335834.0, 695275.0] (must be s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,862 | INFO     | could have reported an average CPU frequency of 2092 MHz (4 samples)
[2025-12-20 12:59:55] 2025-12-20 20:59:19,862 | INFO     | ..............................
[2025-12-20 12:59:55] 2025-12-20 20:59:19,883 | INFO     | . Timing measurements:
[2025-12-20 12:59:55] 2025-12-20 20:59:19,883 | INFO     | . get job = 0 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . initial setup = 4 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . payload setup = 30 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . stage-in = 0 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . payload execution = 288 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . stage-out = 2 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | . log creation = 0 s
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | ..............................
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-12-20 12:59:55] 2025-12-20 20:59:19,884 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6937287525/pilotlog.txt
[2025-12-20 12:59:55] [end log extracts]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,044 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-12-20 12:59:55] 2025-12-20 20:59:20,045 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-12-20 12:59:55] 2025-12-20 20:59:20,718 | INFO     | 
[2025-12-20 12:59:55] 2025-12-20 20:59:20,718 | INFO     | job summary report
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | --------------------------------------------------
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | PanDA job id: 6937287525
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | task id: 47960988
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-12-20 12:56:38,828 CRITICAL Transform executor raised TransformValidationExceptio
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | error 2/2: 1165: Local output file is missing
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | pilot state: failed 
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | transexitcode: 65
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | exeerrorcode: 65
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | exitcode: 65
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | cpuconsumptiontime: 53 s
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | nevents: 0
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | neventsw: 0
[2025-12-20 12:59:55] 2025-12-20 20:59:20,719 | INFO     | pid: 398767
[2025-12-20 12:59:55] 2025-12-20 20:59:20,720 | INFO     | pgrp: 398767
[2025-12-20 12:59:55] 2025-12-20 20:59:20,720 | INFO     | corecount: 12
[2025-12-20 12:59:55] 2025-12-20 20:59:20,720 | INFO     | event service: False
[2025-12-20 12:59:55] 2025-12-20 20:59:20,720 | INFO     | sizes: {0: 2284427, 1: 2284626, 12: 2284626, 23: 2284654, 24: 2284944, 34: 2284972, 324: 2310612, 325: 2310616, 327: 2314962, 331: 2315018, 476: 2315212}
[2025-12-20 12:59:55] 2025-12-20 20:59:20,720 | INFO     | --------------------------------------------------
[2025-12-20 12:59:55] 2025-12-20 20:59:20,720 | INFO     | 
[2025-12-20 12:59:55] 2025-12-20 20:59:20,720 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-12-20 12:59:55] 2025-12-20 20:59:20,732 | INFO     | time since job start (532s) is within the limit (174528.0s)
[2025-12-20 12:59:55] 2025-12-20 20:59:20,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,737 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-20 12:59:55] 2025-12-20 20:59:20,738 | INFO     | job 6937287525 has completed (purged errors)
[2025-12-20 12:59:55] 2025-12-20 20:59:20,739 | INFO     | overall cleanup function is called
[2025-12-20 12:59:55] 2025-12-20 20:59:21,750 | INFO     | --- collectZombieJob: --- 10, [398767]
[2025-12-20 12:59:55] 2025-12-20 20:59:21,750 | INFO     | zombie collector waiting for pid 398767
[2025-12-20 12:59:55] 2025-12-20 20:59:21,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-20 12:59:55] 2025-12-20 20:59:21,750 | INFO     | collected zombie processes
[2025-12-20 12:59:55] 2025-12-20 20:59:21,750 | INFO     | will attempt to kill all subprocesses of pid=398767
[2025-12-20 12:59:55] 2025-12-20 20:59:22,670 | INFO     | process IDs to be killed: [398767] (in reverse order)
[2025-12-20 12:59:55] 2025-12-20 20:59:22,837 | WARNING  | found no corresponding commands to process id(s)
[2025-12-20 12:59:55] 2025-12-20 20:59:22,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-20 12:59:55] 2025-12-20 20:59:22,866 | INFO     | did not find any defunct processes belonging to 398767
[2025-12-20 12:59:55] 2025-12-20 20:59:22,892 | INFO     | did not find any defunct processes belonging to 398767
[2025-12-20 12:59:55] 2025-12-20 20:59:22,898 | INFO     | ready for new job
[2025-12-20 12:59:55] 2025-12-20 20:59:22,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-20 12:59:55] 2025-12-20 20:59:22,900 | INFO     | ***************************************
[2025-12-20 12:59:55] 2025-12-20 20:59:22,900 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-20 12:59:55] 2025-12-20 20:59:22,900 | INFO     | ***************************************
[2025-12-20 12:59:55] 2025-12-20 20:59:22,901 | INFO     | 
[2025-12-20 12:59:55] 2025-12-20 20:59:22,914 | INFO     | architecture information:
[2025-12-20 12:59:55] 2025-12-20 20:59:22,926 | INFO     | executing command: cat /etc/os-release
[2025-12-20 12:59:55] 2025-12-20 20:59:22,975 | INFO     | cat /etc/os-release:
[2025-12-20 12:59:55] NAME="CentOS Linux"
[2025-12-20 12:59:55] VERSION="7 (Core)"
[2025-12-20 12:59:55] ID="centos"
[2025-12-20 12:59:55] ID_LIKE="rhel fedora"
[2025-12-20 12:59:55] VERSION_ID="7"
[2025-12-20 12:59:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-20 12:59:55] ANSI_COLOR="0;31"
[2025-12-20 12:59:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-20 12:59:55] HOME_URL="https://www.centos.org/"
[2025-12-20 12:59:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-20 12:59:55] 
[2025-12-20 12:59:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-20 12:59:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-20 12:59:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-20 12:59:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-20 12:59:55] 
[2025-12-20 12:59:55] 2025-12-20 20:59:22,976 | INFO     | ***************************************
[2025-12-20 12:59:55] 2025-12-20 20:59:23,479 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-12-20 12:59:55] 2025-12-20 20:59:23,591 | INFO     | sufficient remaining disk space (2098107252736 B)
[2025-12-20 12:59:55] 2025-12-20 20:59:23,591 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-20 12:59:55] 2025-12-20 20:59:23,591 | INFO     | current server update state: UPDATING_FINAL
[2025-12-20 12:59:55] 2025-12-20 20:59:23,591 | INFO     | update_server=False
[2025-12-20 12:59:55] 2025-12-20 20:59:23,592 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-20 12:59:55] 2025-12-20 20:59:23,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-20 12:59:55] 2025-12-20 20:59:23,754 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-20 12:59:55] 2025-12-20 20:59:23,755 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-20 12:59:55] 2025-12-20 20:59:23,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-20 12:59:55] 2025-12-20 20:59:23,755 | INFO     | will abort loop
[2025-12-20 12:59:55] 2025-12-20 20:59:24,243 | INFO     | all data control threads have been joined
[2025-12-20 12:59:55] 2025-12-20 20:59:24,307 | INFO     | all payload control threads have been joined
[2025-12-20 12:59:55] 2025-12-20 20:59:24,597 | INFO     | [job] retrieve thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:24,616 | INFO     | all job control threads have been joined
[2025-12-20 12:59:55] 2025-12-20 20:59:24,760 | INFO     | [job] job monitor thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:24,938 | INFO     | [payload] validate_pre thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:24,981 | INFO     | [payload] validate_post thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:25,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:25,249 | INFO     | [data] control thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:25,313 | INFO     | [payload] control thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:25,599 | INFO     | [data] copytool_out thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:25,622 | INFO     | [job] control thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:25,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-20 12:59:55] 2025-12-20 20:59:25,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-20 12:59:55] 2025-12-20 20:59:25,978 | INFO     | [payload] execute_payloads thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:25,979 | INFO     | [job] create_data_payload thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:25,999 | INFO     | [payload] failed_post thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:26,008 | INFO     | [data] copytool_in thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:26,106 | INFO     | [job] validate thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:26,734 | INFO     | [job] queue monitor thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:28,936 | INFO     | [monitor] cgroup control has ended
[2025-12-20 12:59:55] 2025-12-20 20:59:29,783 | INFO     | [data] queue_monitor thread has finished
[2025-12-20 12:59:55] 2025-12-20 20:59:31,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521180923712)>', '<ExcThread(monitor, started 140520189851392)>']
[2025-12-20 12:59:55] 2025-12-20 20:59:36,523 | INFO     | all workflow threads have been joined
[2025-12-20 12:59:55] 2025-12-20 20:59:36,523 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-20 12:59:55] 2025-12-20 20:59:36,524 | INFO     | traces error code: 0
[2025-12-20 12:59:55] 2025-12-20 20:59:36,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-20 12:59:55] 2025-12-20 20:59:54,522 | INFO     | PID=382084 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-20 12:59:55] 2025-12-20 20:59:54,523 | INFO     | .. there are 21 such processes running
[2025-12-20 12:59:55] 2025-12-20 20:59:54,523 | INFO     | found 0 job(s) in 20 queues
[2025-12-20 12:59:55] 2025-12-20 20:59:54,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-20 12:59:55] 2025-12-20 20:59:54,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-20 12:59:55] 2025-12-20 20:59:54,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-20 12:59:55] 2025-12-20 20:59:54,524 | INFO     | [monitor] control thread has ended
[2025-12-20 12:59:55] 2025-12-20 20:59:55,053 [wrapper] ==== pilot stdout END ====
[2025-12-20 12:59:55] 2025-12-20 20:59:55,074 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-20 12:59:55] 2025-12-20 20:59:55,106 [wrapper] pilotpid: 382084
[2025-12-20 12:59:55] 2025-12-20 20:59:55,122 [wrapper] Pilot exit status: 0
[2025-12-20 12:59:55] 2025-12-20 20:59:55,185 [wrapper] pandaids: 6937287525
[2025-12-20 12:59:55] 2025-12-20 20:59:55,271 [wrapper] cleanup supervisor_pilot  382090 382085
[2025-12-20 12:59:55] 2025-12-20 20:59:55,314 [wrapper] Test setup, not cleaning
[2025-12-20 12:59:55] 2025-12-20 20:59:55,334 [wrapper] apfmon messages muted
[2025-12-20 12:59:55] 2025-12-20 20:59:55,363 [wrapper] ==== wrapper stdout END ====
[2025-12-20 12:59:55] 2025-12-20 20:59:55,382 [wrapper] ==== wrapper stderr END ====
[2025-12-20 12:59:55]  *** Error codes and diagnostics ***
[2025-12-20 12:59:55]     "exeErrorCode": 65,
[2025-12-20 12:59:55]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-12-20 12:59:55]     "pilotErrorCode": 1305,
[2025-12-20 12:59:55]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-12-20 12:59:55]  *** Listing of results directory ***
[2025-12-20 12:59:55] total 408884
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc    597923 Dec  7 23:17 pilot3.tar.gz
[2025-12-20 12:59:55] -rwx------. 1 boinc boinc     36322 Dec 19 21:08 runpilot2-wrapper.sh
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc      5112 Dec 19 21:12 queuedata.json
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc       100 Dec 20 12:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-20 12:59:55] -rwxr-xr-x. 1 boinc boinc      7986 Dec 20 12:49 run_atlas
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc       105 Dec 20 12:49 job.xml
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc      6592 Dec 20 12:49 init_data.xml
[2025-12-20 12:59:55] -rw-r--r--. 2 boinc boinc 414390155 Dec 20 12:49 EVNT.47960986._000020.pool.root.1
[2025-12-20 12:59:55] -rw-r--r--. 2 boinc boinc     15847 Dec 20 12:49 start_atlas.sh
[2025-12-20 12:59:55] drwxrwx--x. 2 boinc boinc      4096 Dec 20 12:49 shared
[2025-12-20 12:59:55] -rw-r--r--. 2 boinc boinc    610725 Dec 20 12:49 input.tar.gz
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc         0 Dec 20 12:49 boinc_lockfile
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc      2877 Dec 20 12:49 pandaJob.out
[2025-12-20 12:59:55] -rw-------. 1 boinc boinc    988154 Dec 20 12:50 agis_schedconf.cvmfs.json
[2025-12-20 12:59:55] -rw-------. 1 boinc boinc   1516240 Dec 20 12:50 agis_ddmendpoints.agis.ALL.json
[2025-12-20 12:59:55] drwx------. 7 boinc boinc      4096 Dec 20 12:50 pilot3
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc       525 Dec 20 12:56 boinc_task_state.xml
[2025-12-20 12:59:55] -rw-------. 1 boinc boinc       996 Dec 20 12:56 memory_monitor_summary.json
[2025-12-20 12:59:55] -rw-------. 1 boinc boinc     52935 Dec 20 12:56 log.47960988._000916.job.log.tgz.1
[2025-12-20 12:59:55] -rw-------. 1 boinc boinc     10340 Dec 20 12:59 heartbeat.json
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc        23 Dec 20 12:59 wrapper_checkpoint.txt
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc      8192 Dec 20 12:59 boinc_mmap_file
[2025-12-20 12:59:55] -rw-------. 1 boinc boinc        95 Dec 20 12:59 pilot_heartbeat.json
[2025-12-20 12:59:55] -rw-------. 1 boinc boinc       822 Dec 20 12:59 pilotlog.txt
[2025-12-20 12:59:55] -rw-------. 1 boinc boinc    131929 Dec 20 12:59 log.47960988._000916.job.log.1
[2025-12-20 12:59:55] -rw-------. 1 boinc boinc       186 Dec 20 12:59 output.list
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc       620 Dec 20 12:59 runtime_log
[2025-12-20 12:59:55] -rw-------. 1 boinc boinc    204800 Dec 20 12:59 result.tar.gz
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc      8636 Dec 20 12:59 runtime_log.err
[2025-12-20 12:59:55] -rw-------. 1 boinc boinc       645 Dec 20 12:59 PgoMDmqN4q8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdhcKDmP94mMo.diag
[2025-12-20 12:59:55] -rw-r--r--. 1 boinc boinc     14161 Dec 20 12:59 stderr.txt
[2025-12-20 12:59:56] No HITS result produced
[2025-12-20 12:59:56]  *** Contents of shared directory: ***
[2025-12-20 12:59:56] total 405500
[2025-12-20 12:59:56] -rw-r--r--. 2 boinc boinc 414390155 Dec 20 12:49 ATLAS.root_0
[2025-12-20 12:59:56] -rw-r--r--. 2 boinc boinc     15847 Dec 20 12:49 start_atlas.sh
[2025-12-20 12:59:56] -rw-r--r--. 2 boinc boinc    610725 Dec 20 12:49 input.tar.gz
[2025-12-20 12:59:56] -rw-------. 1 boinc boinc    204800 Dec 20 12:59 result.tar.gz
12:59:57 (375499): run_atlas exited; CPU time 63.804411
12:59:57 (375499): called boinc_finish(0)

</stderr_txt>
]]>

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