Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:02:16 (1268234): wrapper (7.7.26015): starting
16:02:16 (1268234): wrapper: running run_atlas (--nthreads 12)
[2025-12-21 16:02:16] Arguments: --nthreads 12
[2025-12-21 16:02:16] Threads: 12
[2025-12-21 16:02:16] Checking for CVMFS
[2025-12-21 16:02:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-21 16:02:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-21 16:02:17] Running cvmfs_config stat atlas.cern.ch
[2025-12-21 16:02:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-21 16:02:18] 2.13.3.0 55115 13057 239624 154264 3 454 26698940 46080000 34881 130560 0 103529740 99.878 31296217 22058 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-12-21 16:02:18] CVMFS is ok
[2025-12-21 16:02:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-21 16:02:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-21 16:02:18] Further information can be found at the LHC@home message board.
[2025-12-21 16:02:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-21 16:02:18] Checking for apptainer binary...
[2025-12-21 16:02:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-21 16:02:18] Running /usr/bin/apptainer --version
[2025-12-21 16:02:18] apptainer version 1.4.4-1.el9
[2025-12-21 16:02:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-21 16:02:19] mff2104.farm.particle.cz
[2025-12-21 16:02:19] apptainer works
[2025-12-21 16:02:19] Set ATHENA_PROC_NUMBER=12
[2025-12-21 16:02:19] Set ATHENA_CORE_NUMBER=12
[2025-12-21 16:02:19] Starting ATLAS job with PandaID=6937446735
[2025-12-21 16:02:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-22 04:22:28]  *** The last 200 lines of the pilot log: ***
[2025-12-22 04:22:28] 2025-12-22 03:06:41,744 | INFO     | monitor loop #2698: job 0:6937446735 is in state 'finished'
[2025-12-22 04:22:28] 2025-12-22 03:06:41,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:22:28] 2025-12-22 03:06:42,010 | INFO     | time since job start (43372s) is within the limit (174528.0s)
[2025-12-22 04:22:28] 2025-12-22 03:06:44,018 | INFO     | time since job start (43374s) is within the limit (174528.0s)
[2025-12-22 04:22:28] 2025-12-22 03:06:44,262 | INFO     | monitor loop #2699: job 0:6937446735 is in state 'finished'
[2025-12-22 04:22:28] 2025-12-22 03:06:44,262 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:22:28] 2025-12-22 03:06:46,028 | INFO     | time since job start (43376s) is within the limit (174528.0s)
[2025-12-22 04:22:28] 2025-12-22 03:06:46,775 | INFO     | monitor loop #2700: job 0:6937446735 is in state 'finished'
[2025-12-22 04:22:28] 2025-12-22 03:06:46,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:22:28] 2025-12-22 03:06:48,037 | INFO     | time since job start (43378s) is within the limit (174528.0s)
[2025-12-22 04:22:28] 2025-12-22 03:06:49,284 | INFO     | monitor loop #2701: job 0:6937446735 is in state 'finished'
[2025-12-22 04:22:28] 2025-12-22 03:06:49,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:22:28] 2025-12-22 03:06:50,044 | INFO     | time since job start (43380s) is within the limit (174528.0s)
[2025-12-22 04:22:28] 2025-12-22 03:06:51,790 | INFO     | monitor loop #2702: job 0:6937446735 is in state 'finished'
[2025-12-22 04:22:28] 2025-12-22 03:06:51,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-22 04:22:28] 2025-12-22 03:06:51,915 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-22 04:22:28] 2025-12-22 03:06:51,945 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2789.0382499999982
[2025-12-22 04:22:28] 2025-12-22 03:06:51,984 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6937446735/memory_monitor_summary.json (trf name=prmon)
[2025-12-22 04:22:28] 2025-12-22 03:06:51,993 | INFO     | extracted standard info from prmon json
[2025-12-22 04:22:28] 2025-12-22 03:06:51,994 | INFO     | extracted standard memory fields from prmon json
[2025-12-22 04:22:28] 2025-12-22 03:06:51,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-22 04:22:28] 2025-12-22 03:06:52,029 | INFO     | fitting pss+swap vs Time
[2025-12-22 04:22:28] 2025-12-22 03:06:52,030 | INFO     | sum of square deviations: 109580407109.02754
[2025-12-22 04:22:28] 2025-12-22 03:06:52,066 | INFO     | sum of deviations: 801881781601.8583
[2025-12-22 04:22:28] 2025-12-22 03:06:52,067 | INFO     | mean x: 1766351167.9250355
[2025-12-22 04:22:28] 2025-12-22 03:06:52,067 | INFO     | mean y: 3280390.657708628
[2025-12-22 04:22:28] 2025-12-22 03:06:52,067 | INFO     | intersect: -12922431959.187752
[2025-12-22 04:22:28] 2025-12-22 03:06:52,068 | INFO     | chi2: 43.56120533376712
[2025-12-22 04:22:28] 2025-12-22 03:06:52,076 | INFO     | sum of square deviations: 107272304492.86597
[2025-12-22 04:22:28] 2025-12-22 03:06:52,099 | INFO     | time since job start (43382s) is within the limit (174528.0s)
[2025-12-22 04:22:28] 2025-12-22 03:06:52,108 | INFO     | sum of deviations: 1081984731490.7317
[2025-12-22 04:22:28] 2025-12-22 03:06:52,108 | INFO     | mean x: 1766351015.4387465
[2025-12-22 04:22:28] 2025-12-22 03:06:52,108 | INFO     | mean y: 3298893.3774928777
[2025-12-22 04:22:28] 2025-12-22 03:06:52,108 | INFO     | intersect: -17812714645.186634
[2025-12-22 04:22:28] 2025-12-22 03:06:52,109 | INFO     | chi2: 39.695936047722654
[2025-12-22 04:22:28] 2025-12-22 03:06:52,109 | INFO     | current chi2=39.695936047722654 (change=8.873191768750816 %)
[2025-12-22 04:22:28] 2025-12-22 03:06:52,109 | INFO     | right removable region: 701
[2025-12-22 04:22:28] 2025-12-22 03:06:52,110 | INFO     | sum of square deviations: 107271474282.86595
[2025-12-22 04:22:28] 2025-12-22 03:06:52,134 | INFO     | sum of deviations: 453747430316.41125
[2025-12-22 04:22:28] 2025-12-22 03:06:52,134 | INFO     | mean x: 1766351320.4387465
[2025-12-22 04:22:28] 2025-12-22 03:06:52,134 | INFO     | mean y: 3303384.962962963
[2025-12-22 04:22:28] 2025-12-22 03:06:52,135 | INFO     | intersect: -7468183121.987169
[2025-12-22 04:22:28] 2025-12-22 03:06:52,135 | INFO     | chi2: 38.43103344058174
[2025-12-22 04:22:28] 2025-12-22 03:06:52,135 | INFO     | current chi2=38.43103344058174 (change=11.77692824125931 %)
[2025-12-22 04:22:28] 2025-12-22 03:06:52,136 | INFO     | left removable region: 10
[2025-12-22 04:22:28] 2025-12-22 03:06:52,136 | INFO     | sum of square deviations: 102307425116.3621
[2025-12-22 04:22:28] 2025-12-22 03:06:52,151 | INFO     | sum of deviations: 468261651162.68115
[2025-12-22 04:22:28] 2025-12-22 03:06:52,152 | INFO     | mean x: 1766351289.9696093
[2025-12-22 04:22:28] 2025-12-22 03:06:52,152 | INFO     | mean y: 3348427.2706222865
[2025-12-22 04:22:28] 2025-12-22 03:06:52,152 | INFO     | intersect: -8081251205.979457
[2025-12-22 04:22:28] 2025-12-22 03:06:52,153 | INFO     | chi2: 29.289012873857583
[2025-12-22 04:22:28] 2025-12-22 03:06:52,153 | INFO     | current memory leak: 4.58 B/s (using 691 data points, chi2=29.29)
[2025-12-22 04:22:28] 2025-12-22 03:06:52,154 | INFO     | could have reported an average CPU frequency of 2773 MHz (27 samples)
[2025-12-22 04:22:28] 2025-12-22 03:06:52,154 | INFO     | ..............................
[2025-12-22 04:22:28] 2025-12-22 03:06:52,154 | INFO     | . Timing measurements:
[2025-12-22 04:22:28] 2025-12-22 03:06:52,154 | INFO     | . get job = 0 s
[2025-12-22 04:22:28] 2025-12-22 03:06:52,154 | INFO     | . initial setup = 6 s
[2025-12-22 04:22:28] 2025-12-22 03:06:52,155 | INFO     | . payload setup = 74 s
[2025-12-22 04:22:28] 2025-12-22 03:06:52,155 | INFO     | . stage-in = 0 s
[2025-12-22 04:22:28] 2025-12-22 03:06:52,155 | INFO     | . payload execution = 43162 s
[2025-12-22 04:22:28] 2025-12-22 03:06:52,155 | INFO     | . stage-out = 4 s
[2025-12-22 04:22:28] 2025-12-22 03:06:52,155 | INFO     | . log creation = 1 s
[2025-12-22 04:22:28] 2025-12-22 03:06:52,155 | INFO     | ..............................
[2025-12-22 04:22:28] 2025-12-22 03:06:52,311 | INFO     | 
[2025-12-22 04:22:28] 2025-12-22 03:06:52,311 | INFO     | job summary report
[2025-12-22 04:22:28] 2025-12-22 03:06:52,311 | INFO     | --------------------------------------------------
[2025-12-22 04:22:28] 2025-12-22 03:06:52,312 | INFO     | PanDA job id: 6937446735
[2025-12-22 04:22:28] 2025-12-22 03:06:52,312 | INFO     | task id: 47961002
[2025-12-22 04:22:28] 2025-12-22 03:06:52,312 | INFO     | errors: (none)
[2025-12-22 04:22:28] 2025-12-22 03:06:52,312 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-22 04:22:28] 2025-12-22 03:06:52,312 | INFO     | pilot state: finished 
[2025-12-22 04:22:28] 2025-12-22 03:06:52,312 | INFO     | transexitcode: 0
[2025-12-22 04:22:28] 2025-12-22 03:06:52,312 | INFO     | exeerrorcode: 0
[2025-12-22 04:22:28] 2025-12-22 03:06:52,312 | INFO     | exeerrordiag: 
[2025-12-22 04:22:28] 2025-12-22 03:06:52,312 | INFO     | exitcode: 0
[2025-12-22 04:22:28] 2025-12-22 03:06:52,312 | INFO     | exitmsg: OK
[2025-12-22 04:22:28] 2025-12-22 03:06:52,312 | INFO     | cpuconsumptiontime: 274922 s
[2025-12-22 04:22:28] 2025-12-22 03:06:52,313 | INFO     | nevents: 1000
[2025-12-22 04:22:28] 2025-12-22 03:06:52,313 | INFO     | neventsw: 0
[2025-12-22 04:22:28] 2025-12-22 03:06:52,313 | INFO     | pid: 1296252
[2025-12-22 04:22:28] 2025-12-22 03:06:52,313 | INFO     | pgrp: 1296252
[2025-12-22 04:22:28] 2025-12-22 03:06:52,313 | INFO     | corecount: 12
[2025-12-22 04:22:28] 2025-12-22 03:06:52,313 | INFO     | event service: False
[2025-12-22 04:22:28] 2025-12-22 03:06:52,313 | INFO     | sizes: {0: 2284346, 1: 2284430, 2: 2284601, 13: 2284629, 23: 2284685, 34: 2284713, 44: 2285131, 45: 2285159, 43241: 2330525, 43246: 2339521, 43248: 2339577, 43294:
[2025-12-22 04:22:28] 2025-12-22 03:06:52,313 | INFO     | --------------------------------------------------
[2025-12-22 04:22:28] 2025-12-22 03:06:52,313 | INFO     | 
[2025-12-22 04:22:28] 2025-12-22 03:06:52,313 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-12-22 04:22:28] 2025-12-22 03:06:52,486 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,486 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,486 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,486 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,488 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,488 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-22 04:22:28] 2025-12-22 03:06:52,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,488 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-22 04:22:28] 2025-12-22 03:06:52,488 | INFO     | job 6937446735 has completed (purged errors)
[2025-12-22 04:22:28] 2025-12-22 03:06:52,488 | INFO     | overall cleanup function is called
[2025-12-22 04:22:28] 2025-12-22 03:06:53,545 | INFO     | --- collectZombieJob: --- 10, [1296252]
[2025-12-22 04:22:28] 2025-12-22 03:06:53,546 | INFO     | zombie collector waiting for pid 1296252
[2025-12-22 04:22:28] 2025-12-22 03:06:53,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-22 04:22:28] 2025-12-22 03:06:53,546 | INFO     | collected zombie processes
[2025-12-22 04:22:28] 2025-12-22 03:06:53,546 | INFO     | will attempt to kill all subprocesses of pid=1296252
[2025-12-22 04:22:28] 2025-12-22 03:06:55,345 | INFO     | PID=1278332 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-22 04:22:28] 2025-12-22 03:06:55,345 | INFO     | .. there are 78 such processes running
[2025-12-22 04:22:28] 2025-12-22 03:06:55,649 | INFO     | process IDs to be killed: [1296252] (in reverse order)
[2025-12-22 04:22:28] 2025-12-22 03:06:56,129 | WARNING  | found no corresponding commands to process id(s)
[2025-12-22 04:22:28] 2025-12-22 03:06:56,130 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-22 04:22:28] 2025-12-22 03:06:56,158 | INFO     | did not find any defunct processes belonging to 1296252
[2025-12-22 04:22:28] 2025-12-22 03:06:56,187 | INFO     | did not find any defunct processes belonging to 1296252
[2025-12-22 04:22:28] 2025-12-22 03:06:56,187 | INFO     | ready for new job
[2025-12-22 04:22:28] 2025-12-22 03:06:56,187 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-22 04:22:28] 2025-12-22 03:06:56,259 | INFO     | ***************************************
[2025-12-22 04:22:28] 2025-12-22 03:06:56,259 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-22 04:22:28] 2025-12-22 03:06:56,259 | INFO     | ***************************************
[2025-12-22 04:22:28] 2025-12-22 03:06:56,259 | INFO     | 
[2025-12-22 04:22:28] 2025-12-22 03:06:56,269 | INFO     | architecture information:
[2025-12-22 04:22:28] 2025-12-22 03:06:56,278 | INFO     | executing command: cat /etc/os-release
[2025-12-22 04:22:28] 2025-12-22 03:06:56,354 | INFO     | cat /etc/os-release:
[2025-12-22 04:22:28] NAME="CentOS Linux"
[2025-12-22 04:22:28] VERSION="7 (Core)"
[2025-12-22 04:22:28] ID="centos"
[2025-12-22 04:22:28] ID_LIKE="rhel fedora"
[2025-12-22 04:22:28] VERSION_ID="7"
[2025-12-22 04:22:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-22 04:22:28] ANSI_COLOR="0;31"
[2025-12-22 04:22:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-22 04:22:28] HOME_URL="https://www.centos.org/"
[2025-12-22 04:22:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-22 04:22:28] 
[2025-12-22 04:22:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-22 04:22:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-22 04:22:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-22 04:22:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-22 04:22:28] 
[2025-12-22 04:22:28] 2025-12-22 03:06:56,355 | INFO     | ***************************************
[2025-12-22 04:22:28] 2025-12-22 03:06:56,858 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-12-22 04:22:28] 2025-12-22 03:06:56,980 | INFO     | sufficient remaining disk space (1648010199040 B)
[2025-12-22 04:22:28] 2025-12-22 03:06:56,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-22 04:22:28] 2025-12-22 03:06:56,981 | INFO     | current server update state: UPDATING_FINAL
[2025-12-22 04:22:28] 2025-12-22 03:06:56,981 | INFO     | update_server=False
[2025-12-22 04:22:28] 2025-12-22 03:06:56,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-22 04:22:28] 2025-12-22 03:06:56,981 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-22 04:22:28] 2025-12-22 03:06:57,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-22 04:22:28] 2025-12-22 03:06:57,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-22 04:22:28] 2025-12-22 03:06:57,659 | INFO     | all data control threads have been joined
[2025-12-22 04:22:28] 2025-12-22 03:06:57,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-22 04:22:28] 2025-12-22 03:06:57,819 | INFO     | aborting loop
[2025-12-22 04:22:28] 2025-12-22 03:06:57,987 | INFO     | [job] retrieve thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:58,089 | INFO     | [payload] validate_post thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:58,096 | INFO     | [payload] execute_payloads thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:58,161 | INFO     | all job control threads have been joined
[2025-12-22 04:22:28] 2025-12-22 03:06:58,206 | INFO     | all payload control threads have been joined
[2025-12-22 04:22:28] 2025-12-22 03:06:58,363 | INFO     | [job] queue monitor thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:58,632 | INFO     | [data] copytool_in thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:58,665 | INFO     | [data] control thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:58,775 | INFO     | [job] create_data_payload thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:58,820 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:58,824 | INFO     | [job] job monitor thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:58,828 | INFO     | [job] validate thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:58,987 | INFO     | [data] copytool_out thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:59,025 | INFO     | [payload] failed_post thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:59,167 | INFO     | [job] control thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:59,180 | INFO     | [payload] validate_pre thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:06:59,212 | INFO     | [payload] control thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:07:01,203 | INFO     | [data] queue_monitor thread has finished
[2025-12-22 04:22:28] 2025-12-22 03:07:04,157 | INFO     | [monitor] cgroup control has ended
[2025-12-22 04:22:28] 2025-12-22 03:07:05,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140704915400512)>', '<ExcThread(monitor, started 140704563046144)>']
[2025-12-22 04:22:28] 2025-12-22 03:07:10,145 | INFO     | all workflow threads have been joined
[2025-12-22 04:22:28] 2025-12-22 03:07:10,152 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-22 04:22:28] 2025-12-22 03:07:10,152 | INFO     | traces error code: 0
[2025-12-22 04:22:28] 2025-12-22 03:07:10,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-22 04:22:28] 2025-12-22 03:07:28,846 | INFO     | PID=1278332 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-22 04:22:28] 2025-12-22 03:07:28,853 | INFO     | .. there are 78 such processes running
[2025-12-22 04:22:28] 2025-12-22 03:07:28,854 | INFO     | found 0 job(s) in 20 queues
[2025-12-22 04:22:28] 2025-12-22 03:07:28,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-22 04:22:28] 2025-12-22 03:07:28,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-22 04:22:28] 2025-12-22 03:07:28,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-22 04:22:28] 2025-12-22 03:07:28,854 | INFO     | [monitor] control thread has ended
[2025-12-22 04:22:28] 2025-12-22 03:07:29,078 [wrapper] ==== pilot stdout END ====
[2025-12-22 04:22:28] 2025-12-22 03:07:29,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-22 04:22:28] 2025-12-22 03:07:29,186 [wrapper] pilotpid: 1278332
[2025-12-22 04:22:28] 2025-12-22 03:07:29,228 [wrapper] Pilot exit status: 0
[2025-12-22 04:22:28] 2025-12-22 03:07:29,360 [wrapper] pandaids: 6937446735
[2025-12-22 04:22:28] 2025-12-22 03:07:29,835 [wrapper] cleanup supervisor_pilot 3772068 1278333
[2025-12-22 04:22:28] 2025-12-22 03:07:29,886 [wrapper] Test setup, not cleaning
[2025-12-22 04:22:28] 2025-12-22 03:07:29,935 [wrapper] apfmon messages muted
[2025-12-22 04:22:28] 2025-12-22 03:07:29,986 [wrapper] ==== wrapper stdout END ====
[2025-12-22 04:22:28] 2025-12-22 03:07:30,042 [wrapper] ==== wrapper stderr END ====
[2025-12-22 04:22:28]  *** Error codes and diagnostics ***
[2025-12-22 04:22:28]     "exeErrorCode": 0,
[2025-12-22 04:22:28]     "exeErrorDiag": "",
[2025-12-22 04:22:28]     "pilotErrorCode": 0,
[2025-12-22 04:22:28]     "pilotErrorDiag": "",
[2025-12-22 04:22:28]  *** Listing of results directory ***
[2025-12-22 04:22:28] total 1277548
[2025-12-22 04:22:28] -rwx------ 1 boinc boinc     36322 Dec 20 06:08 runpilot2-wrapper.sh
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc      5112 Dec 20 06:13 queuedata.json
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc    579449 Dec 20 06:13 pilot3.tar.gz
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc       100 Dec 21 16:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-22 04:22:28] -rwxr-xr-x 1 boinc boinc      7986 Dec 21 16:02 run_atlas
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc       105 Dec 21 16:02 job.xml
[2025-12-22 04:22:28] -rw-r--r-- 2 boinc boinc 395673123 Dec 21 16:02 EVNT.47961000._000047.pool.root.1
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc      6675 Dec 21 16:02 init_data.xml
[2025-12-22 04:22:28] -rw-r--r-- 2 boinc boinc     15847 Dec 21 16:02 start_atlas.sh
[2025-12-22 04:22:28] drwxrwx--x 2 boinc boinc      4096 Dec 21 16:02 shared
[2025-12-22 04:22:28] -rw-r--r-- 2 boinc boinc    592613 Dec 21 16:02 input.tar.gz
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc         0 Dec 21 16:02 boinc_lockfile
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc      2892 Dec 21 16:02 pandaJob.out
[2025-12-22 04:22:28] -rw------- 1 boinc boinc    988146 Dec 21 16:03 agis_schedconf.cvmfs.json
[2025-12-22 04:22:28] drwx------ 5 boinc boinc      4096 Dec 21 16:03 pilot3
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc       532 Dec 22 03:27 boinc_task_state.xml
[2025-12-22 04:22:28] -rw------- 1 boinc boinc 892522792 Dec 22 04:04 HITS.47961002._000450.pool.root.1
[2025-12-22 04:22:28] -rw------- 1 boinc boinc      1038 Dec 22 04:05 memory_monitor_summary.json
[2025-12-22 04:22:28] -rw------- 1 boinc boinc   1516240 Dec 22 04:06 agis_ddmendpoints.agis.ALL.json
[2025-12-22 04:22:28] -rw------- 1 boinc boinc   2383447 Dec 22 04:06 log.47961002._000450.job.log.tgz.1
[2025-12-22 04:22:28] -rw------- 1 boinc boinc      8599 Dec 22 04:06 heartbeat.json
[2025-12-22 04:22:28] -rw------- 1 boinc boinc        95 Dec 22 04:07 pilot_heartbeat.json
[2025-12-22 04:22:28] -rw------- 1 boinc boinc       823 Dec 22 04:07 pilotlog.txt
[2025-12-22 04:22:28] -rw------- 1 boinc boinc   5665682 Dec 22 04:07 log.47961002._000450.job.log.1
[2025-12-22 04:22:28] -rw------- 1 boinc boinc       353 Dec 22 04:07 output.list
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc       620 Dec 22 04:07 runtime_log
[2025-12-22 04:22:28] -rw------- 1 boinc boinc   8069120 Dec 22 04:07 result.tar.gz
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc      8881 Dec 22 04:07 runtime_log.err
[2025-12-22 04:22:28] -rw------- 1 boinc boinc       671 Dec 22 04:07 2scNDm0N4q8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsXhKDm8J7oen.diag
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc        28 Dec 22 04:22 wrapper_checkpoint.txt
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc      8192 Dec 22 04:22 boinc_mmap_file
[2025-12-22 04:22:28] -rw-r--r-- 1 boinc boinc     21819 Dec 22 04:22 stderr.txt
[2025-12-22 04:22:28] HITS file was successfully produced:
[2025-12-22 04:22:28] -rw------- 1 boinc boinc 892522792 Dec 22 04:04 shared/HITS.pool.root.1
[2025-12-22 04:22:28]  *** Contents of shared directory: ***
[2025-12-22 04:22:28] total 1266492
[2025-12-22 04:22:28] -rw-r--r-- 2 boinc boinc 395673123 Dec 21 16:02 ATLAS.root_0
[2025-12-22 04:22:28] -rw-r--r-- 2 boinc boinc     15847 Dec 21 16:02 start_atlas.sh
[2025-12-22 04:22:28] -rw-r--r-- 2 boinc boinc    592613 Dec 21 16:02 input.tar.gz
[2025-12-22 04:22:28] -rw------- 1 boinc boinc 892522792 Dec 22 04:04 HITS.pool.root.1
[2025-12-22 04:22:28] -rw------- 1 boinc boinc   8069120 Dec 22 04:07 result.tar.gz
04:22:29 (1268234): run_atlas exited; CPU time 276002.759030
04:22:29 (1268234): called boinc_finish(0)

</stderr_txt>
]]>

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